View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1170_low_28 (Length: 319)
Name: NF1170_low_28
Description: NF1170
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1170_low_28 |
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Alignment Details
Target: chr7 (Bit Score: 287; Significance: 1e-161; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 287; E-Value: 1e-161
Query Start/End: Original strand, 8 - 298
Target Start/End: Original strand, 33504845 - 33505135
Alignment:
| Q |
8 |
tatcataggataacctactaaatgaaccattattgatctcttcctctatgttacggcacatttgagttagagccttcccactaccaaattcaactaaatt |
107 |
Q |
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| T |
33504845 |
tatcataggataacctactaaatgaaccattattgatctcttcctctatgttacggcacatttgagttagagccttcccactaccaaattcaactaaatt |
33504944 |
T |
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| Q |
108 |
tttgcaatagtttcctgcatctggagtccatccttgttcaaaatcttccaccaatttctctaccgagattttcagtttcctaataatttagtaaccaaaa |
207 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
33504945 |
tttgcaatagtttcctgcatctggagtccatccttgttcaaaatcttccaccaatttctctaccgagatttccagtttcctaataatttagtaaccaaaa |
33505044 |
T |
|
| Q |
208 |
tattaattaatatttgcatatatagttaacatgcatagtaataagaaaaatatacaatctataaagcatagactcaaacacggacaccaga |
298 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33505045 |
tattaattaatatttgcatatatagttaacatgcatagtaataagaaaaatatacaatctataaagcatagactcaaacacggacaccaga |
33505135 |
T |
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