View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1170_low_32 (Length: 306)
Name: NF1170_low_32
Description: NF1170
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1170_low_32 |
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Alignment Details
Target: chr6 (Bit Score: 93; Significance: 3e-45; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 84 - 205
Target Start/End: Complemental strand, 9583216 - 9583089
Alignment:
| Q |
84 |
atcccctgagatatcaaaaacatgcacatgttaatcatggctaagagattcctacgaaaaaccatgaaacaacctgcacattgttaccca------tcat |
177 |
Q |
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| T |
9583216 |
atcccttgagatgtcaaaaacatgcacatgttaatcatggctaagagattcctacaaaaaaccatgaaacaacctgcacattgttacccatcatgatcat |
9583117 |
T |
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| Q |
178 |
accagtctagtgtaaatacaaagatgtt |
205 |
Q |
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|||||||||||||||||||||||||||| |
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| T |
9583116 |
accagtctagtgtaaatacaaagatgtt |
9583089 |
T |
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