View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1170_low_54 (Length: 219)
Name: NF1170_low_54
Description: NF1170
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1170_low_54 |
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Alignment Details
Target: chr4 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 68 - 116
Target Start/End: Original strand, 17478435 - 17478479
Alignment:
| Q |
68 |
atacctgttcttgcatagcctgcctgcacttgtttgttgtgctttgaca |
116 |
Q |
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| T |
17478435 |
atacctgttcttgcatagcct----gcacttgtttgttgtgctttgaca |
17478479 |
T |
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