View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11712_low_5 (Length: 249)

Name: NF11712_low_5
Description: NF11712
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11712_low_5
NF11712_low_5
[»] chr5 (36 HSPs)
chr5 (1-234)||(36362989-36363222)
chr5 (1-185)||(7544142-7544326)
chr5 (1-185)||(13634717-13634901)
chr5 (1-145)||(9856926-9857070)
chr5 (1-185)||(16938485-16938669)
chr5 (1-185)||(26414899-26415083)
chr5 (19-185)||(10072719-10072885)
chr5 (1-185)||(16501844-16502030)
chr5 (3-185)||(4373622-4373804)
chr5 (55-185)||(2550460-2550590)
chr5 (1-185)||(28279530-28279715)
chr5 (1-106)||(36392204-36392309)
chr5 (1-125)||(8502889-8503013)
chr5 (78-185)||(22022853-22022963)
chr5 (1-118)||(9798666-9798783)
chr5 (1-110)||(37606975-37607084)
chr5 (1-110)||(37779184-37779293)
chr5 (55-185)||(40815303-40815432)
chr5 (1-90)||(20146920-20147009)
chr5 (45-195)||(10476022-10476174)
chr5 (1-109)||(20513499-20513611)
chr5 (4-63)||(14245145-14245204)
chr5 (1-116)||(17024278-17024393)
chr5 (26-100)||(37551498-37551572)
chr5 (26-100)||(37654328-37654402)
chr5 (4-61)||(10650544-10650601)
chr5 (1-49)||(1657955-1658003)
chr5 (4-83)||(13839785-13839864)
chr5 (122-185)||(14245094-14245157)
chr5 (1-100)||(29002260-29002359)
chr5 (152-194)||(20147075-20147117)
chr5 (152-185)||(13634916-13634949)
chr5 (152-185)||(14245251-14245284)
chr5 (153-185)||(11436945-11436977)
chr5 (5-52)||(17780292-17780340)
chr5 (149-185)||(36363234-36363270)
[»] chr6 (31 HSPs)
chr6 (1-185)||(31849116-31849300)
chr6 (1-185)||(30487360-30487543)
chr6 (1-183)||(33235959-33236140)
chr6 (3-185)||(4097568-4097751)
chr6 (1-185)||(21606898-21607082)
chr6 (1-185)||(19278088-19278275)
chr6 (3-185)||(33041476-33041650)
chr6 (1-118)||(34176408-34176525)
chr6 (1-185)||(9719085-9719268)
chr6 (1-132)||(10348852-10348984)
chr6 (4-131)||(5585359-5585486)
chr6 (1-198)||(14515466-14515661)
chr6 (1-107)||(1300704-1300810)
chr6 (1-194)||(1390316-1390509)
chr6 (55-185)||(2892711-2892841)
chr6 (1-89)||(9721192-9721280)
chr6 (1-195)||(10818225-10818406)
chr6 (4-194)||(16738053-16738242)
chr6 (1-100)||(665894-665994)
chr6 (69-185)||(2893636-2893752)
chr6 (33-120)||(25741478-25741565)
chr6 (20-118)||(13583792-13583890)
chr6 (1-100)||(1395727-1395826)
chr6 (1-84)||(2900017-2900100)
chr6 (55-185)||(12811089-12811218)
chr6 (149-185)||(15323231-15323267)
chr6 (149-185)||(15353370-15353406)
chr6 (75-177)||(6034200-6034302)
chr6 (152-198)||(9051737-9051783)
chr6 (4-185)||(30849971-30850150)
chr6 (152-185)||(9719037-9719070)
[»] chr1 (25 HSPs)
chr1 (1-185)||(38509948-38510132)
chr1 (1-185)||(30010338-30010522)
chr1 (1-185)||(32951372-32951556)
chr1 (1-195)||(12234006-12234200)
chr1 (1-185)||(49946642-49946826)
chr1 (5-185)||(51597674-51597854)
chr1 (1-184)||(2858986-2859169)
chr1 (1-194)||(41498401-41498594)
chr1 (1-111)||(36285628-36285738)
chr1 (1-185)||(35349518-35349700)
chr1 (1-145)||(8529845-8529989)
chr1 (1-120)||(40094987-40095107)
chr1 (1-125)||(45585739-45585863)
chr1 (1-132)||(50744334-50744466)
chr1 (1-111)||(7444575-7444685)
chr1 (20-111)||(42230618-42230709)
chr1 (33-183)||(10391880-10392030)
chr1 (1-107)||(41676363-41676471)
chr1 (39-116)||(26940935-26941012)
chr1 (4-185)||(1085547-1085728)
chr1 (55-119)||(44211013-44211077)
chr1 (1-85)||(20576187-20576269)
chr1 (152-199)||(20607422-20607469)
chr1 (152-194)||(35927811-35927853)
chr1 (152-185)||(26324020-26324053)
[»] chr7 (34 HSPs)
chr7 (1-185)||(1051554-1051736)
chr7 (1-185)||(33655162-33655346)
chr7 (3-194)||(13771004-13771193)
chr7 (1-185)||(24970219-24970403)
chr7 (1-185)||(47390861-47391046)
chr7 (1-132)||(40196586-40196717)
chr7 (1-132)||(34235061-34235193)
chr7 (4-110)||(22163167-22163272)
chr7 (4-110)||(22221875-22221980)
chr7 (39-185)||(25887198-25887344)
chr7 (39-185)||(41008188-41008333)
chr7 (69-200)||(39855987-39856118)
chr7 (3-145)||(41497013-41497155)
chr7 (1-185)||(40572289-40572471)
chr7 (39-185)||(34228410-34228557)
chr7 (4-185)||(26365773-26365955)
chr7 (1-105)||(10315719-10315823)
chr7 (48-185)||(31571569-31571708)
chr7 (1-100)||(4833585-4833684)
chr7 (20-120)||(37417706-37417806)
chr7 (1-84)||(18231693-18231776)
chr7 (1-120)||(42306405-42306520)
chr7 (39-145)||(43230282-43230388)
chr7 (3-100)||(13425176-13425273)
chr7 (1-132)||(17852930-17853060)
chr7 (1-100)||(42087086-42087185)
chr7 (4-65)||(32872838-32872899)
chr7 (59-132)||(38378104-38378177)
chr7 (150-185)||(31364247-31364282)
chr7 (152-199)||(37925833-37925880)
chr7 (152-185)||(36267758-36267791)
chr7 (152-185)||(42306535-42306568)
chr7 (153-185)||(40282203-40282235)
chr7 (158-194)||(48881760-48881796)
[»] chr2 (31 HSPs)
chr2 (1-145)||(23748141-23748285)
chr2 (1-185)||(36347595-36347779)
chr2 (1-185)||(15224748-15224932)
chr2 (1-185)||(9426991-9427176)
chr2 (3-118)||(16565850-16565965)
chr2 (1-185)||(39732783-39732966)
chr2 (1-185)||(36566904-36567090)
chr2 (4-99)||(9631652-9631747)
chr2 (8-185)||(12541776-12541949)
chr2 (9-106)||(17379897-17379994)
chr2 (1-95)||(34209560-34209654)
chr2 (3-185)||(8426935-8427109)
chr2 (5-185)||(19566878-19567054)
chr2 (1-185)||(36046258-36046439)
chr2 (42-146)||(6721717-6721821)
chr2 (43-185)||(2241417-2241558)
chr2 (69-185)||(35736181-35736297)
chr2 (1-120)||(40022441-40022563)
chr2 (1-90)||(42316818-42316907)
chr2 (39-107)||(37739983-37740051)
chr2 (4-196)||(31795826-31796013)
chr2 (1-74)||(27926670-27926743)
chr2 (4-120)||(28262500-28262616)
chr2 (4-116)||(39821744-39821856)
chr2 (152-185)||(31061565-31061598)
chr2 (33-110)||(29525817-29525896)
chr2 (1-46)||(1583222-1583267)
chr2 (152-185)||(17379852-17379885)
chr2 (55-100)||(18811419-18811464)
chr2 (158-194)||(17380052-17380088)
chr2 (149-185)||(42296505-42296541)
[»] chr8 (34 HSPs)
chr8 (1-193)||(1281141-1281333)
chr8 (1-185)||(30479771-30479955)
chr8 (1-185)||(9718533-9718717)
chr8 (1-185)||(31543126-31543310)
chr8 (4-185)||(28083748-28083929)
chr8 (1-185)||(11575460-11575644)
chr8 (1-185)||(7979146-7979330)
chr8 (1-145)||(16652995-16653139)
chr8 (2-185)||(7503009-7503192)
chr8 (3-185)||(2248458-2248640)
chr8 (1-185)||(1026903-1027086)
chr8 (1-125)||(6315128-6315252)
chr8 (3-132)||(29358396-29358524)
chr8 (1-145)||(11785572-11785716)
chr8 (41-185)||(40990278-40990421)
chr8 (5-116)||(30664436-30664547)
chr8 (1-120)||(31738494-31738613)
chr8 (33-185)||(33922531-33922678)
chr8 (9-145)||(37032425-37032561)
chr8 (5-185)||(11033425-11033604)
chr8 (55-132)||(42650444-42650521)
chr8 (3-110)||(4247574-4247680)
chr8 (1-120)||(37923132-37923251)
chr8 (60-185)||(10028116-10028241)
chr8 (1-182)||(13404985-13405170)
chr8 (55-119)||(41103614-41103678)
chr8 (3-74)||(34634260-34634331)
chr8 (39-120)||(36308913-36308995)
chr8 (69-109)||(34633819-34633859)
chr8 (39-90)||(29691014-29691065)
chr8 (1-99)||(24243103-24243199)
chr8 (152-185)||(7394666-7394699)
chr8 (152-185)||(12022348-12022381)
chr8 (153-185)||(43732685-43732717)
[»] chr4 (36 HSPs)
chr4 (1-185)||(45741896-45742080)
chr4 (1-185)||(31348375-31348559)
chr4 (1-194)||(54935064-54935259)
chr4 (1-175)||(49735522-49735695)
chr4 (1-185)||(27735751-27735935)
chr4 (3-195)||(54320431-54320622)
chr4 (10-185)||(26166943-26167118)
chr4 (39-194)||(1968451-1968606)
chr4 (1-185)||(5730884-5731069)
chr4 (1-120)||(36151647-36151765)
chr4 (4-182)||(16400809-16400987)
chr4 (33-185)||(46007787-46007939)
chr4 (1-195)||(29798284-29798475)
chr4 (39-132)||(35248745-35248838)
chr4 (1-185)||(2247857-2248039)
chr4 (1-120)||(41174416-41174535)
chr4 (4-178)||(6891373-6891547)
chr4 (1-175)||(24565400-24565572)
chr4 (4-185)||(45132559-45132733)
chr4 (48-196)||(37711133-37711286)
chr4 (4-185)||(17938164-17938346)
chr4 (56-185)||(22920987-22921117)
chr4 (56-185)||(22970682-22970812)
chr4 (4-185)||(47433766-47433947)
chr4 (3-99)||(34110897-34110992)
chr4 (42-146)||(44784037-44784141)
chr4 (45-120)||(2917061-2917136)
chr4 (1-44)||(6938394-6938437)
chr4 (50-185)||(56135755-56135890)
chr4 (113-187)||(6938285-6938359)
chr4 (158-187)||(27775587-27775616)
chr4 (152-185)||(49735474-49735507)
chr4 (152-185)||(49735697-49735730)
chr4 (152-185)||(54320639-54320672)
chr4 (152-196)||(7977702-7977746)
chr4 (158-198)||(14539487-14539527)
[»] chr3 (33 HSPs)
chr3 (1-185)||(220451-220635)
chr3 (1-195)||(41110375-41110569)
chr3 (1-185)||(24560223-24560407)
chr3 (3-198)||(21773775-21773970)
chr3 (1-185)||(18654654-18654839)
chr3 (1-185)||(14897982-14898170)
chr3 (1-175)||(30200142-30200319)
chr3 (1-117)||(16275759-16275875)
chr3 (1-132)||(37102203-37102334)
chr3 (1-116)||(36568957-36569072)
chr3 (1-111)||(9312525-9312635)
chr3 (48-185)||(28582610-28582747)
chr3 (4-132)||(37807139-37807267)
chr3 (4-119)||(2387817-2387932)
chr3 (44-182)||(27542028-27542166)
chr3 (1-107)||(40463925-40464031)
chr3 (3-185)||(52473921-52474103)
chr3 (1-194)||(25655024-25655219)
chr3 (5-100)||(41040008-41040103)
chr3 (44-185)||(46204892-46205033)
chr3 (2-132)||(10748345-10748482)
chr3 (1-145)||(46556189-46556335)
chr3 (3-107)||(52185100-52185202)
chr3 (33-185)||(43005825-43005977)
chr3 (4-132)||(55327429-55327557)
chr3 (149-185)||(27541937-27541973)
chr3 (122-185)||(55428554-55428617)
chr3 (69-199)||(6803323-6803453)
chr3 (152-193)||(46205097-46205138)
chr3 (4-120)||(651802-651917)
chr3 (39-95)||(13082954-13083010)
chr3 (4-100)||(24253813-24253909)
chr3 (56-120)||(54574470-54574534)
[»] scaffold0067 (1 HSPs)
scaffold0067 (1-199)||(39241-39442)
[»] scaffold0171 (1 HSPs)
scaffold0171 (1-177)||(15964-16140)
[»] scaffold0262 (1 HSPs)
scaffold0262 (1-120)||(16350-16469)
[»] scaffold0294 (1 HSPs)
scaffold0294 (3-132)||(15322-15450)
[»] scaffold0026 (1 HSPs)
scaffold0026 (1-185)||(1178-1362)
[»] scaffold0096 (1 HSPs)
scaffold0096 (4-185)||(6590-6770)


Alignment Details
Target: chr5 (Bit Score: 174; Significance: 1e-93; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 1 - 234
Target Start/End: Complemental strand, 36363222 - 36362989
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttatttt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  36363222 tcatttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatgacacttgatttatttt 36363123  T
Q  101 ggaaaaacatgctatatagtacgtagtttaaacaagcaaactaaattttctcctccattcccctcctaaaccctcaatccaaacaaaaccttaaagtttt 200  Q
     |||||||||| |||||||||||||||||||||||| ||| |||| | || ||||||||||||| ||||||||||||||||||||   ||||||||||||    
T  36363122 agaaaaacatgttatatagtacgtagtttaaacaagaaaattaaactctcccctccattccccttctaaaccctcaatccaaacacgtccttaaagtttt 36363023  T
Q  201 aactagatgtgtcaaataaaacaagttaacatga 234  Q
    || |||||||| ||||||||||| ||||||||||    
T  36363022 aaatagatgtgccaaataaaacatgttaacatga 36362989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 7544326 - 7544142
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttatttt 100  Q
    |||||||||||||||||| ||||| |||||| ||||| ||||||| ||||||| ||| ||||||||| |||||| |||||||||||||||||||||||||    
T  7544326 tcatttttaaattacggacactatgaaatgttttttaaaaagttagcatattaacataataaacaatcatataatacttcaatcacacttgatttatttt 7544227  T
Q  101 ggaaaaacatgctatatagtacgtagtttaaacaagcaaactaaattttctcctccattcccctcctaaaccctcaatccaaaca 185  Q
     |||||||||| |||||||| |||| |||||| ||| ||| | |    || ||||| ||||| ||||||||||||||||||||||    
T  7544226 agaaaaacatgttatatagtccgtaatttaaaaaagaaaatttagccctcccctcccttcccttcctaaaccctcaatccaaaca 7544142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 13634901 - 13634717
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttatttt 100  Q
    |||||||||||||||| | ||||| |||||| ||||| ||||||||||||||| |||||||||| || |||||| | ||||||||||| | |||||||||    
T  13634901 tcatttttaaattacgaacactatgaaatgttttttaaaaagttaacatattaacatgataaacgatcatataataattcaatcacacataatttatttt 13634802  T
Q  101 ggaaaaacatgctatatagtacgtagtttaaacaagcaaactaaattttctcctccattcccctcctaaaccctcaatccaaaca 185  Q
     |||||||||| |||||||| |||  |||||| ||| ||| ||||   || ||||| ||||||||||||||||||||||||||||    
T  13634801 agaaaaacatgttatatagtccgttatttaaaaaagaaaagtaaaccctcccctcccttcccctcctaaaccctcaatccaaaca 13634717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 9857070 - 9856926
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttatttt 100  Q
    |||||||||| ||||||| ||||| |||||| ||||| ||||||||||||||| ||| |||||| || |||||| |||||||||||||||||||||||||    
T  9857070 tcatttttaagttacggacactatgaaatgttttttaaaaagttaacatattaacataataaacgatcatataatacttcaatcacacttgatttatttt 9856971  T
Q  101 ggaaaaacatgctatatagtacgtagtttaaacaagcaaactaaa 145  Q
     |||||||||| |||||||| | || |||||| ||| ||||||||    
T  9856970 agaaaaacatgttatatagtccttaatttaaaaaagaaaactaaa 9856926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 16938669 - 16938485
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttatttt 100  Q
    ||||||||||||||| || ||||| |||||| ||||| | ||||||||| ||| |||||||||  || |||||| | ||||||||||||| |||||||||    
T  16938669 tcatttttaaattactgacactatgaaatgttttttaaagagttaacatgttaacatgataaatgatcatataatatttcaatcacacttaatttatttt 16938570  T
Q  101 ggaaaaacatgctatatagtacgtagtttaaacaagcaaactaaattttctcctccattcccctcctaaaccctcaatccaaaca 185  Q
     || ||||||| |||||||| ||||  ||||| ||| |||  |||   || ||||| ||||||||||||||||||||||||||||    
T  16938569 agagaaacatgttatatagtccgtaacttaaaaaagaaaaacaaaccctcccctcccttcccctcctaaaccctcaatccaaaca 16938485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 26415083 - 26414899
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttatttt 100  Q
    |||||||||| |||| || ||||| |||||| || || ||||||||||||||| |||||||||| |  |||||| ||||||||||||||| || ||||||    
T  26415083 tcatttttaagttacagacactatgaaatgttttataaaaagttaacatattaacatgataaacgaccatataatacttcaatcacacttaatatatttt 26414984  T
Q  101 ggaaaaacatgctatatagtacgtagtttaaacaagcaaactaaattttctcctccattcccctcctaaaccctcaatccaaaca 185  Q
     ||||||||||  ||||||| |||| |||||| | | ||| ||||   || ||||| ||| ||||||||||||||||||||||||    
T  26414983 agaaaaacatgtcatatagtccgtaatttaaaaacgaaaagtaaaccctcccctcccttctcctcctaaaccctcaatccaaaca 26414899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 185
Target Start/End: Original strand, 10072719 - 10072885
Alignment:
Q  19 tactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttattttggaaaaacatgctatata 118  Q
    |||||| |||| | ||||| ||||||||||||||| |||||||||| || |||||| |||||||||| |||| ||||||||| |||||||||| ||||      
T  10072719 tactatgaaatattttttaaaaagttaacatattaacatgataaacgatcatataatacttcaatcatacttaatttattttagaaaaacatgttatacc 10072818  T
Q  119 gtacgtagtttaaacaagcaaactaaattttctcctccattcccctcctaaaccctcaatccaaaca 185  Q
    ||  ||| |||||| ||| ||| ||||| ||||||||| || ||||| |||||| ||||| ||||||    
T  10072819 gtcggtaatttaaaaaagaaaagtaaatcttctcctccttttccctcttaaaccatcaattcaaaca 10072885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 16501844 - 16502030
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttatttt 100  Q
    |||||||||||||||||| | ||| |||||| ||||  ||||||||||||||| ||| |||||  || ||||||||||| ||||||||||||||||||||    
T  16501844 tcatttttaaattacggacattatgaaatgtttttttaaaagttaacatattaacataataaatgatcatataaaactttaatcacacttgatttatttt 16501943  T
Q  101 -ggaaaaacatgctatatagtacgtagtttaaacaagcaaactaaatt-ttctcctccattcccctcctaaaccctcaatccaaaca 185  Q
     | ||||| ||| |||||||| |||| |||||| ||  ||| ||| || | | ||||  || |||||||||||||||||||||||||    
T  16501944 agaaaaaatatgatatatagtccgtaatttaaaaaataaaagtaatttctccccctctctttccctcctaaaccctcaatccaaaca 16502030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 3 - 185
Target Start/End: Original strand, 4373622 - 4373804
Alignment:
Q  3 atttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttattttgg 102  Q
    |||||||||||||||| ||| | |||| | ||||  ||||||||||||||| |||||||||  || |||||| | ||||||||||||| |||||||||      
T  4373622 atttttaaattacggacactgtgaaatatttttttaaaagttaacatattaacatgataaatgatcatataatatttcaatcacacttaatttattttta 4373721  T
Q  103 aaaaacatgctatatagtacgtagtttaaacaagcaaactaaattttctcctccattcccctcctaaaccctcaatccaaaca 185  Q
    |||||| || |||||||| |||| |||||| ||| ||| |||||  ||  ||   ||||| ||||||||||||||||||||||    
T  4373722 aaaaacttgttatatagtccgtaatttaaaaaagaaaagtaaatcctccactattttcccttcctaaaccctcaatccaaaca 4373804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 55 - 185
Target Start/End: Original strand, 2550460 - 2550590
Alignment:
Q  55 catgataaacaatgatataaaacttcaatcacacttgatttattttggaaaaacatgctatatagtacgtagtttaaacaagcaaactaaattttctcct 154  Q
    ||||||||||||| |||||| ||||||||||||| | ||||||| | |||||||||| |||||||| || |  ||||| ||| ||| ||||   || |||    
T  2550460 catgataaacaatcatataatacttcaatcacacgtaatttattatagaaaaacatgttatatagtccgaatcttaaaaaagaaaagtaaaccctcccct 2550559  T
Q  155 ccattcccctcctaaaccctcaatccaaaca 185  Q
    || ||||||||||||||||||||||||||||    
T  2550560 cccttcccctcctaaaccctcaatccaaaca 2550590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 28279530 - 28279715
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttatttt 100  Q
    |||||||||||||| ||| | ||| |||||| ||||| ||||||||||||||| |||||||||  || |||||| |||||||||||||||  ||||||||    
T  28279530 tcatttttaaattatggacattatgaaatgttttttaaaaagttaacatattaacatgataaatgatcatataatacttcaatcacacttagtttatttt 28279629  T
Q  101 -ggaaaaacatgctatatagtacgtagtttaaacaagcaaactaaattttctcctccattcccctcctaaaccctcaatccaaaca 185  Q
     | ||||||||| |||||| | | || |||||| | | ||| ||||   |||||||| |||||||  || || |||||||||||||    
T  28279630 agaaaaaacatgttatatattccataatttaaaaaggaaaagtaaaccctctcctcccttccccttatagactctcaatccaaaca 28279715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 36392204 - 36392309
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttatttt 100  Q
    ||||||||||||||| || ||||| |||||| || || ||||||||||||||| |||||||||| || |||||| ||||||||||||||| || ||||||    
T  36392204 tcatttttaaattacagacactatgaaatgttttataaaaagttaacatattaacatgataaacgatcatataatacttcaatcacacttaatctatttt 36392303  T
Q  101 ggaaaa 106  Q
     |||||    
T  36392304 agaaaa 36392309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 8502889 - 8503013
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttatttt 100  Q
    |||||||||||||||||| | ||| |||| | ||||| |||||||||| ||||  |||||| ||||| | |||| ||||||||||||||| |||||||||    
T  8502889 tcatttttaaattacggacattatgaaatattttttaaaaagttaacaaattaatatgatacacaattacataatacttcaatcacacttaatttatttt 8502988  T
Q  101 ggaaaaacatgctatatagtacgta 125  Q
     ||||| |||| |||||||| ||||    
T  8502989 agaaaagcatgttatatagtccgta 8503013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 78 - 185
Target Start/End: Complemental strand, 22022963 - 22022853
Alignment:
Q  78 ttcaatcacacttgatttattttggaaaaacatgctatatagtacgtagtttaaacaagcaaa---ctaaattttctcctccattcccctcctaaaccct 174  Q
    ||||||||||||| ||||||||| |||||| ||| |||||||| |||| |||||| ||  |||   ||||||  ||||||||||||||||||||||||||    
T  22022963 ttcaatcacacttaatttattttagaaaaatatgttatatagtccgtaatttaaaaaaaaaaaaaactaaatcctctcctccattcccctcctaaaccct 22022864  T
Q  175 caatccaaaca 185  Q
    |||||||||||    
T  22022863 caatccaaaca 22022853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 9798666 - 9798783
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttatttt 100  Q
    |||||||||||||||||||||||  |||||| ||||| ||||| || || ||| ||||| |||| || |||||| |||||||||||| || ||||||||     
T  9798666 tcatttttaaattacggatactacgaaatgttttttaaaaagtcaatattttaacatgaaaaacgatcatataatacttcaatcacaattaatttattta 9798765  T
Q  101 ggaaaaacatgctatata 118  Q
     |||||||||| ||||||    
T  9798766 agaaaaacatgttatata 9798783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 37607084 - 37606975
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttatttt 100  Q
    ||||||||||| ||| |||||||| |||||| || || ||||||||||||||| |||||||||| || |||||| ||||||||||||  | |||||||||    
T  37607084 tcatttttaaaatacagatactatgaaatgttttataaaaagttaacatattaacatgataaacgatcatataatacttcaatcacatataatttatttt 37606985  T
Q  101 ggaaaaacat 110  Q
      ||||||||    
T  37606984 aaaaaaacat 37606975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 37779293 - 37779184
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttatttt 100  Q
    ||||||||||| ||| |||||||| |||||| || || ||||||||||||||| |||||||||| || |||||| ||||||||||||  | |||||||||    
T  37779293 tcatttttaaactacagatactatgaaatgttttataaaaagttaacatattaacatgataaacgatcatataatacttcaatcacatataatttatttt 37779194  T
Q  101 ggaaaaacat 110  Q
      ||||||||    
T  37779193 aaaaaaacat 37779184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 55 - 185
Target Start/End: Complemental strand, 40815432 - 40815303
Alignment:
Q  55 catgataaacaatgatataaaacttcaatcacacttgatttattttggaaaaacatgctatatagtacgtagtttaaacaagcaaactaaattttctcct 154  Q
    ||||||||||||| |||||| | |||||||||||||  ||||||||  ||||||||| ||||||||  ||| |||||| ||| ||| |||||  |||| |    
T  40815432 catgataaacaattatataatatttcaatcacacttt-tttattttataaaaacatgttatatagtctgtaatttaaaaaagaaaagtaaatcctctctt 40815334  T
Q  155 ccattcccctcctaaaccctcaatccaaaca 185  Q
    || ||||||||||||| | ||||||||||||    
T  40815333 cccttcccctcctaaatcttcaatccaaaca 40815303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 20146920 - 20147009
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacactt 90  Q
    |||||||||||||||||  ||||| |||||| ||||| ||||||||||||||| |||||||| | || |||||| | |||||||||||||    
T  20146920 tcatttttaaattacggtcactatgaaatgttttttaaaaagttaacatattaacatgataagcgatcatataatatttcaatcacactt 20147009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 45 - 195
Target Start/End: Complemental strand, 10476174 - 10476022
Alignment:
Q  45 aacatattagcatgataaacaatgatataaaacttcaatcacacttgatttattttggaaaaacatg-ctatatagtacgt-agtttaaacaagcaaact 142  Q
    |||||||||  ||||||||| || |||||| ||||||||||||||| ||||||||| ||||||||||  |||||| |  || | |||||| ||| ||| |    
T  10476174 aacatattaagatgataaacgattatataatacttcaatcacacttaatttattttagaaaaacatgtatatataatctgtaattttaaaaaagaaaagt 10476075  T
Q  143 aaattttctcctccattcccctcctaaaccctcaatccaaacaaaaccttaaa 195  Q
    |||   |||| ||| ||||||||||||||||||||| |||||| | |||||||    
T  10476074 aaaccctctcatcccttcccctcctaaaccctcaattcaaacacacccttaaa 10476022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 20513499 - 20513611
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaat----gatataaaacttcaatcacacttgattta 96  Q
    ||||||||||| ||| || ||||| |||||| ||||| ||||||||||||||| |||||||||| ||     |||||| ||||||||||||||| |||||    
T  20513499 tcatttttaaactacagacactatgaaatgttttttaaaaagttaacatattatcatgataaacgatcatatatataatacttcaatcacacttaattta 20513598  T
Q  97 ttttggaaaaaca 109  Q
    ||||  |||||||    
T  20513599 ttttataaaaaca 20513611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 14245145 - 14245204
Alignment:
Q  4 tttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaa 63  Q
    ||||||||||||||| ||| | |||||| ||||||||||||||||||||| |||||||||    
T  14245145 tttttaaattacggacactgtgaaatgttttttagaaagttaacatattaacatgataaa 14245204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 17024278 - 17024393
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttatttt 100  Q
    ||||||||||||| | || | ||| ||||||  |||| ||||||| ||||||| ||||| |||| || |||||| |||||||||  |||| |||||||||    
T  17024278 tcatttttaaattgcagacattatgaaatgttctttaaaaagttatcatattaacatgaaaaacgatcatataatacttcaatcgtacttaatttatttt 17024377  T
Q  101 ggaaaaacatgctata 116  Q
     |||||||||| ||||    
T  17024378 agaaaaacatgttata 17024393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 26 - 100
Target Start/End: Complemental strand, 37551572 - 37551498
Alignment:
Q  26 aaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttatttt 100  Q
    |||||| || || ||||||||||||||| |||||||||| || |||||| ||||||||||||| | |||||||||    
T  37551572 aaatgttttataaaaagttaacatattaacatgataaacgatcatataatacttcaatcacacataatttatttt 37551498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 26 - 100
Target Start/End: Complemental strand, 37654402 - 37654328
Alignment:
Q  26 aaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttatttt 100  Q
    |||||| || || ||||||||||||||| |||||||||| || |||||| ||||||||||||| | |||||||||    
T  37654402 aaatgttttataaaaagttaacatattaacatgataaacgatcatataatacttcaatcacacataatttatttt 37654328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 10650601 - 10650544
Alignment:
Q  4 tttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgata 61  Q
    ||||||||||||||||||||| |||||| || || ||||||||||||||| |||||||    
T  10650601 tttttaaattacggatactatgaaatgttttataaaaagttaacatattaccatgata 10650544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 1658003 - 1657955
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttagaaagttaacat 49  Q
    |||||||||||||||||| |||||||||||| ||||| |||||||||||    
T  1658003 tcatttttaaattacggacactataaaatgttttttaaaaagttaacat 1657955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 83
Target Start/End: Original strand, 13839785 - 13839864
Alignment:
Q  4 tttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaat 83  Q
    ||||||||||| ||| |||||||||||| ||||  |||||| | ||| || ||||||| ||||| |||||| ||||||||    
T  13839785 tttttaaattatggacactataaaatgtattttgaaaagttgaaataataacatgatagacaatcatataatacttcaat 13839864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 122 - 185
Target Start/End: Complemental strand, 14245157 - 14245094
Alignment:
Q  122 cgtagtttaaacaagcaaactaaattttctcctccattcccctcctaaaccctcaatccaaaca 185  Q
    |||| |||||| ||| ||| |||||  || ||||| ||||||||||||||||||||||||||||    
T  14245157 cgtaatttaaaaaagaaaagtaaatcctcccctcccttcccctcctaaaccctcaatccaaaca 14245094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 29002260 - 29002359
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttatttt 100  Q
    |||||||||||||| | | |||||||||||| ||||  |||   ||||||||| |||||||||| || |||||| ||| |||||| | || |||||||||    
T  29002260 tcatttttaaattatgaacactataaaatgttttttttaaaaacaacatattaacatgataaacgatcatataatactacaatcatatttaatttatttt 29002359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 194
Target Start/End: Original strand, 20147075 - 20147117
Alignment:
Q  152 cctccattcccctcctaaaccctcaatccaaacaaaaccttaa 194  Q
    ||||| |||||||||||||||||||||||||||| | ||||||    
T  20147075 cctcccttcccctcctaaaccctcaatccaaacacacccttaa 20147117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 152 - 185
Target Start/End: Original strand, 13634916 - 13634949
Alignment:
Q  152 cctccattcccctcctaaaccctcaatccaaaca 185  Q
    ||||| ||||||||||||||||||||||||||||    
T  13634916 cctcccttcccctcctaaaccctcaatccaaaca 13634949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 152 - 185
Target Start/End: Original strand, 14245251 - 14245284
Alignment:
Q  152 cctccattcccctcctaaaccctcaatccaaaca 185  Q
    ||||| ||||||||||||||||||||||||||||    
T  14245251 cctcccttcccctcctaaaccctcaatccaaaca 14245284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 185
Target Start/End: Complemental strand, 11436977 - 11436945
Alignment:
Q  153 ctccattcccctcctaaaccctcaatccaaaca 185  Q
    |||| ||||||||||||||||||||||||||||    
T  11436977 ctcccttcccctcctaaaccctcaatccaaaca 11436945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 17780292 - 17780340
Alignment:
Q  5 ttttaaattacggatactataaaatg-tcttttagaaagttaacatatt 52  Q
    |||||||||||||||| ||||||||| | ||||| ||||||||||||||    
T  17780292 ttttaaattacggatattataaaatgtttttttaaaaagttaacatatt 17780340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 185
Target Start/End: Original strand, 36363234 - 36363270
Alignment:
Q  149 tctcctccattcccctcctaaaccctcaatccaaaca 185  Q
    |||||||| |||||||||||||||||| |||||||||    
T  36363234 tctcctcccttcccctcctaaaccctccatccaaaca 36363270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 101; Significance: 4e-50; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 31849300 - 31849116
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttatttt 100  Q
    |||||||||||||||||| |||||||||||||||||| ||| ||||||||||| | ||||||||||| |||||| |||||||||||||||||||||||||    
T  31849300 tcatttttaaattacggacactataaaatgtcttttaaaaaattaacatattaacgtgataaacaataatataatacttcaatcacacttgatttatttt 31849201  T
Q  101 ggaaaaacatgctatatagtacgtagtttaaacaagcaaactaaattttctcctccattcccctcctaaaccctcaatccaaaca 185  Q
     |||||| ||| ||||||||  |||||||||| ||| ||||||||   || ||||| |||||||| |||||||||||||| ||||    
T  31849200 agaaaaatatgttatatagtctgtagtttaaaaaagaaaactaaaccctcccctcccttcccctcttaaaccctcaatcctaaca 31849116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 30487360 - 30487543
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttatttt 100  Q
    ||||| |||||||| ||| | ||| |||||||||||| ||||| ||||||||| ||||||||||||| |||||| |||||||||||||||||||||||||    
T  30487360 tcattgttaaatta-ggacagtatgaaatgtcttttaaaaagtcaacatattaacatgataaacaataatataatacttcaatcacacttgatttatttt 30487458  T
Q  101 ggaaaaacatgctatatagtacgtagtttaaacaagcaaactaaattttctcctccattcccctcctaaaccctcaatccaaaca 185  Q
      ||||||||| |||||||| ||||||||||| ||  ||||||||   ||  |||| |||||||||||||||||||||| |||||    
T  30487459 ataaaaacatgttatatagtccgtagtttaaaaaataaaactaaaccctccactcccttcccctcctaaaccctcaatcgaaaca 30487543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 33236140 - 33235959
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttatttt 100  Q
    |||||||||||||||||| ||||| |||| | ||||| ||||||||||||||| ||||||||||||| ||||||  |||||||||  ||| |||||||||    
T  33236140 tcatttttaaattacggacactatgaaattt-ttttaaaaagttaacatattaacatgataaacaatcatataattcttcaatcagtcttaatttatttt 33236042  T
Q  101 ggaaaaacatgctatatagtacgtagtttaaacaagcaaactaaattttctcctccattcccctcctaaaccctcaatccaaa 183  Q
     |||||||||| |||||||| |||| |||||| ||| ||| |||| ||||  |||| ||| || |||||| ||||||||||||    
T  33236041 agaaaaacatgttatatagtccgtaatttaaaaaagaaaagtaaactttccactcccttctccacctaaatcctcaatccaaa 33235959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 3 - 185
Target Start/End: Original strand, 4097568 - 4097751
Alignment:
Q  3 atttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttattttgg 102  Q
    |||||||||||||||| ||| | |||||| ||||| ||||||||||||||| |||||||||| || |||||| ||||||||||||||| |||||||||||    
T  4097568 atttttaaattacggacactttgaaatgttttttaaaaagttaacatattaacatgataaacgatcatataatacttcaatcacacttaatttattttgg 4097667  T
Q  103 -aaaaacatgctatatagtacgtagtttaaacaagcaaactaaattttctcctccattcccctcctaaaccctcaatccaaaca 185  Q
     ||||| ||| ||||| || |||| |||||| ||| ||| | ||   |  ||||| |||||||| |||||||||||||||||||    
T  4097668 aaaaaaaatgttatattgtccgtaatttaaaaaagaaaagtgaacccttccctcccttcccctcttaaaccctcaatccaaaca 4097751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 21606898 - 21607082
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttatttt 100  Q
    |||||||||||||||||| ||||| |||||| || || ||||||||||||||| |||||||||| ||  ||||| |||||| |||||||| |||||||||    
T  21606898 tcatttttaaattacggaaactatgaaatgttttataaaaagttaacatattaacatgataaacgatcgtataatacttcagtcacactttatttatttt 21606997  T
Q  101 ggaaaaacatgctatatagtacgtagtttaaacaagcaaactaaattttctcctccattcccctcctaaaccctcaatccaaaca 185  Q
     |||||||||   |||||||  ||| |||||| | | ||  ||||  |||  |||  ||||||||||||||||||||||||||||    
T  21606998 agaaaaacatataatatagtttgtaatttaaaaacgaaatgtaaacattcatctctcttcccctcctaaaccctcaatccaaaca 21607082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 19278088 - 19278275
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttagaaagttaac----atattagcatgataaacaatgatataaaacttcaatcacacttgattta 96  Q
    ||||||||||||||| || |||||||||| | ||||| |||||| ||    |||||| |||||||||| || |||| | |||||||||| |||  |||||    
T  19278088 tcatttttaaattactgacactataaaatattttttaaaaagttgacatatatattaacatgataaacgatcatatgatacttcaatcagactaaattta 19278187  T
Q  97 ttttggaaaaacatgctatatagtacgtagtttaaacaagcaaactaaattttctcctccattcccctcctaaaccctcaatccaaaca 185  Q
    |||| |||||||||| |||||||| |||| |||||| ||| ||| ||||   || ||||| |||||||||||||| |||||||||||||    
T  19278188 ttttagaaaaacatgttatatagtccgtaatttaaaaaag-aaaataaaccctcccctcccttcccctcctaaactctcaatccaaaca 19278275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 3 - 185
Target Start/End: Complemental strand, 33041650 - 33041476
Alignment:
Q  3 atttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttattttgg 102  Q
    |||||||||||||||||||||| |||||| ||||| ||||||||||||||| ||||||||        |||| ||||||||||||||| |||||||||      
T  33041650 atttttaaattacggatactatgaaatgttttttaaaaagttaacatattaacatgataa--------ataacacttcaatcacacttaatttattttaa 33041559  T
Q  103 aaaaacatgctatatagtacgtagtttaaacaagcaaactaaattttctcctccattcccctcctaaaccctcaatccaaaca 185  Q
    |||||||   ||||||||   || |||||| | | ||| |||||| || ||||| |||| ||||||||||| |||||||||||    
T  33041558 aaaaacacattatatagtctataatttaaaaatgaaaaataaattctcccctcctttcctctcctaaacccccaatccaaaca 33041476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 34176525 - 34176408
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttatttt 100  Q
    |||||||||||||||||| ||||| |||| | ||||  ||||||||||||||| ||| |||||| ||  ||||| ||| |||||||||||||||||||||    
T  34176525 tcatttttaaattacggacactatgaaatattttttttaaagttaacatattaacataataaacgatcgtataatactgcaatcacacttgatttatttt 34176426  T
Q  101 ggaaaaacatgctatata 118  Q
     |||||||||| ||||||    
T  34176425 agaaaaacatgttatata 34176408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 9719085 - 9719268
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttatttt 100  Q
    |||||||||||||||||| |||||  ||||| ||||| |||||||||||||||   ||||||||||| |||||| ||||||||||||||  ||||| |||    
T  9719085 tcatttttaaattacggacactatggaatgttttttaaaaagttaacatattaatttgataaacaatcatataatacttcaatcacactaaatttaattt 9719184  T
Q  101 ggaaaaacatgctatatagtacgtagtttaaacaagcaaactaaattttctcctccattcccctcctaaaccctcaatccaaaca 185  Q
      |||| |||| |||||||| || | |||||| ||| ||| ||||    | ||||  |||||||| |||||||||||||||||||    
T  9719185 -aaaaagcatgttatatagtccggaatttaaaaaagaaaattaaacccacccctctcttcccctcataaaccctcaatccaaaca 9719268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 10348852 - 10348984
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttatttt 100  Q
    |||||||||||||||||||| ||| |||| ||||||| |||||||||||||||  | ||||||| || |||||| ||||||||| ||||||| |||||||    
T  10348852 tcatttttaaattacggataatatgaaatatcttttaaaaagttaacatattaatacgataaacgataatataatacttcaatcgcacttgaattatttt 10348951  T
Q  101 -ggaaaaacatgctatatagtacgtagtttaaa 132  Q
       ||||||||| |||||||| |||| ||||||    
T  10348952 aaaaaaaacatgttatatagtccgtaatttaaa 10348984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 4 - 131
Target Start/End: Original strand, 5585359 - 5585486
Alignment:
Q  4 tttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttattttgga 103  Q
    ||||||||||||| | ||||| |||||| ||||| |||| |||||||||| ||| |||||| || ||| || | ||||||||||||| ||||||||| ||    
T  5585359 tttttaaattacgaacactatgaaatgttttttaaaaaggtaacatattaacataataaacgattatacaatatttcaatcacacttaatttattttaga 5585458  T
Q  104 aaaacatgctatatagtacgtagtttaa 131  Q
    |||||||| |||||||| |||| |||||    
T  5585459 aaaacatgttatatagtccgtaatttaa 5585486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 14515661 - 14515466
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttatttt 100  Q
    |||||||||||||| | | |||||||||| | ||||  | ||||||||||| | |||||||||  || |||||| |||||| |||||||| |||||||||    
T  14515661 tcatttttaaattatgaacactataaaatattttttgaagagttaacatatgaacatgataaatgataatataatacttcattcacacttaatttatttt 14515562  T
Q  101 ggaaaaacatgctatatagtacgtagtttaaacaagcaaactaaattttctcctccattcccctcctaaaccctcaatccaaacaaaaccttaaagtt 198  Q
     || ||||||  ||| |||| |||| |||||| ||| |||  |||   || ||||| |||||||||||||||||||||||||||| | ||||| ||||    
T  14515561 agagaaacat--tatctagtccgtaatttaaaaaagaaaaacaaaccctcccctcccttcccctcctaaaccctcaatccaaacacacccttagagtt 14515466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 1300810 - 1300704
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttatttt 100  Q
    |||||||||||||||||| | ||| |||| | || || ||||||||||||||| | ||||||||||| |||||| ||||||||||||||| |||||| ||    
T  1300810 tcatttttaaattacggacaatatgaaatattttataaaaagttaacatattaacctgataaacaatcatataatacttcaatcacacttaatttatctt 1300711  T
Q  101 ggaaaaa 107  Q
    | |||||    
T  1300710 gaaaaaa 1300704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 194
Target Start/End: Complemental strand, 1390509 - 1390316
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttatttt 100  Q
    ||||||||||||||| || ||||| |||| | ||||| ||||||||||||||| |||||||||  || | |||| | |||||||| |||| |||||||||    
T  1390509 tcatttttaaattactgacactatgaaatattttttaaaaagttaacatattaacatgataaatgatca-ataatatttcaatcaaacttaatttatttt 1390411  T
Q  101 ggaa-aaacatgctatatagtacgtagtttaaacaagcaaactaaattttctcctccattcccctcctaaaccctcaatccaaacaaaaccttaa 194  Q
     ||| ||||||| || ||||| |||| ||| || ||| ||| |||||| ||||  |  |||||||| ||||||||| ||||||||| | ||||||    
T  1390410 agaataaacatgttacatagtccgtaattttaaaaagaaaattaaattctctctgctcttcccctcataaaccctccatccaaacacacccttaa 1390316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 55 - 185
Target Start/End: Original strand, 2892711 - 2892841
Alignment:
Q  55 catgataaacaatgatataaaacttcaatcacacttgatttattttggaaaaacatgctatatagtacgtagtttaaacaagcaaactaaattttctcct 154  Q
    ||||||||||||| |||||| | ||||||||||||  ||||||||| ||||||| || |||||||| ||||||||||| ||| ||| |||||| || |||    
T  2892711 catgataaacaatcatataatatttcaatcacactaaatttattttagaaaaacgtgttatatagtccgtagtttaaaaaagaaaagtaaattctcccct 2892810  T
Q  155 ccattcccctcctaaaccctcaatccaaaca 185  Q
    || ||| ||| | |||||||| || ||||||    
T  2892811 cccttcgccttccaaaccctccattcaaaca 2892841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 9721192 - 9721280
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacact 89  Q
    |||||||||||||||||| |||||  ||||| ||||| |||||||||||||||   ||||||||||| |||||| ||||||||||||||    
T  9721192 tcatttttaaattacggacactatggaatgttttttaaaaagttaacatattaatttgataaacaatcatataatacttcaatcacact 9721280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 195
Target Start/End: Complemental strand, 10818406 - 10818225
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttatttt 100  Q
    |||||||||||||||||| ||||| |||||| ||||| ||  ||||||||||| |||||||||  || |||||| |||||||||||| ||              
T  10818406 tcatttttaaattacggacactatgaaatgttttttaaaatattaacatattaacatgataaatgatcatataatacttcaatcacattt---------- 10818317  T
Q  101 ggaaaaacatgctatatagtacgtagtttaaacaagcaaactaaattttctcctccattcccctcctaaaccctcaatccaaacaaaaccttaaa 195  Q
       |||||||| ||||| || |||| |||||| ||| ||| ||||   || ||||| |||||||||||||||||||||||||||| | |||||||    
T  10818316 ---aaaacatgttatattgtccgtaatttaaaaaagaaaaataaacaatcccctcccttcccctcctaaaccctcaatccaaacacacccttaaa 10818225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 194
Target Start/End: Original strand, 16738053 - 16738242
Alignment:
Q  4 tttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttattttgga 103  Q
    ||||||||||| ||| ||||| |||||| ||||   || |||| ||| || ||||||| || || |||||| |||| ||| ||||||  |||||||| ||    
T  16738053 tttttaaattatggaaactatgaaatgttttttgataaattaaaataataacatgatatacgatcatataatacttaaataacacttactttattttaga 16738152  T
Q  104 aaaacatgctatatagtacgtagtttaaacaagcaaactaaattttctcctccattcccctcctaaaccctcaatccaaacaaaaccttaa 194  Q
    |||||||  |||||| |  ||| |||||| ||| ||| |||| | || ||||| ||||| |||||||||||||||||||||||| ||||||    
T  16738153 aaaacattttatataatctgtaatttaaaaaagaaaagtaaactctcccctcc-ttcccatcctaaaccctcaatccaaacaaacccttaa 16738242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 665894 - 665994
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttagaaagtt-aacatattagcatgataaacaatgatataaaacttcaatcacacttgatttattt 99  Q
    |||||||||||||| | ||| ||| |||||||||||| ||| || ||||||||| |||||||||  ||||||||| ||||||| ||||||| |||| |||    
T  665894 tcatttttaaattatgaatattatgaaatgtcttttaaaaattttaacatattaacatgataaatgatgatataatacttcaaccacacttaattttttt 665993  T
Q  100 t 100  Q
    |    
T  665994 t 665994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 69 - 185
Target Start/End: Complemental strand, 2893752 - 2893636
Alignment:
Q  69 atataaaacttcaatcacacttgatttattttggaaaaacatgctatatagtacgtagtttaaacaagcaaactaaattttctcctccattcccctccta 168  Q
    |||||| || |||||||||||| ||||||||| |||||||||| ||||||||  |||||||||| | | ||| |||| | ||  |||  ||||| ||| |    
T  2893752 atataatacatcaatcacacttaatttattttagaaaaacatgttatatagtctgtagtttaaaaacgaaaagtaaactctccgctcatttcccttccca 2893653  T
Q  169 aaccctcaatccaaaca 185  Q
    |||||||||||||||||    
T  2893652 aaccctcaatccaaaca 2893636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 33 - 120
Target Start/End: Complemental strand, 25741565 - 25741478
Alignment:
Q  33 ttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttattttggaaaaacatgctatatagt 120  Q
    ||||| |||||||||||| ||  ||||||||| || ||||||||||||| |||| ||| |||||||||  ||||||||| ||||||||    
T  25741565 ttttaaaaagttaacataataatatgataaacgatcatataaaacttcagtcacgcttaatttattttaaaaaaacatgttatatagt 25741478  T

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Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 118
Target Start/End: Complemental strand, 13583890 - 13583792
Alignment:
Q  20 actataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttattttggaaaaacatgctatata 118  Q
    ||||| |||||| ||||| ||| ||||||| ||| ||| |||||  || |||||| | ||||||||||||| ||||||||| |||||||||| ||||||    
T  13583890 actatgaaatgttttttaaaaaattaacatgttaacataataaatgatcatataatatttcaatcacacttaatttattttagaaaaacatgttatata 13583792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 1395826 - 1395727
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttatttt 100  Q
    |||||||||||||||  | ||| || ||||| ||||| ||| |||||||||||||||||||||  || || ||  | ||||||||||||| |||||||||    
T  1395826 tcatttttaaattactaacactgtagaatgttttttaaaaaattaacatattagcatgataaatgatcatgtattatttcaatcacacttaatttatttt 1395727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 2900100 - 2900017
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatc 84  Q
    ||||||||||||||  || ||||| |||||| || ||  |||||||||||||| ||||||||||||| |||||| || ||||||    
T  2900100 tcatttttaaattatagacactatgaaatgttttataagaagttaacatattaacatgataaacaatcatataatacatcaatc 2900017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 55 - 185
Target Start/End: Original strand, 12811089 - 12811218
Alignment:
Q  55 catgataaacaatgatataaaacttcaatcacacttgatttattttggaaaaacatgctatatagtacgtagtttaaacaagcaaactaaattttctcct 154  Q
    ||||||||||||| ||||  | |||||||||||||| ||||||||| |||||||||  ||||||||   || |||||| ||| ||| |||    || |||    
T  12811089 catgataaacaatcatatcta-cttcaatcacacttaatttattttagaaaaacatattatatagtctctaatttaaagaagaaaagtaatccctcccct 12811187  T
Q  155 ccattcccctcctaaaccctcaatccaaaca 185  Q
    |  ||||| ||||||||||||||||||||||    
T  12811188 ctcttcccatcctaaaccctcaatccaaaca 12811218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 185
Target Start/End: Complemental strand, 15323267 - 15323231
Alignment:
Q  149 tctcctccattcccctcctaaaccctcaatccaaaca 185  Q
    |||||||| ||||||||||||||||||||||||||||    
T  15323267 tctcctcccttcccctcctaaaccctcaatccaaaca 15323231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 185
Target Start/End: Complemental strand, 15353406 - 15353370
Alignment:
Q  149 tctcctccattcccctcctaaaccctcaatccaaaca 185  Q
    |||||||| ||||||||||||||||||||||||||||    
T  15353406 tctcctcccttcccctcctaaaccctcaatccaaaca 15353370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 177
Target Start/End: Original strand, 6034200 - 6034302
Alignment:
Q  75 aacttcaatcacacttgatttattttggaaaaacatgctatatagtacgtagtttaaacaagcaaactaaattttctcctccattcccctcctaaaccct 174  Q
    |||||||||||||||| ||||||||| |||||||||| |||| |||  | | |||||| ||| ||| |||||  |||  ||| || |||||| |||||||    
T  6034200 aacttcaatcacacttaatttattttagaaaaacatgttatacagtctgcaatttaaaaaagaaaagtaaatcctcttttccctttccctccgaaaccct 6034299  T
Q  175 caa 177  Q
    |||    
T  6034300 caa 6034302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 198
Target Start/End: Original strand, 9051737 - 9051783
Alignment:
Q  152 cctccattcccctcctaaaccctcaatccaaacaaaaccttaaagtt 198  Q
    ||||| |||||||| ||||||||||||||||||| | ||||||||||    
T  9051737 cctcccttcccctcttaaaccctcaatccaaacacacccttaaagtt 9051783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 185
Target Start/End: Original strand, 30849971 - 30850150
Alignment:
Q  4 tttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttattttgga 103  Q
    ||||||||||||| |||||||||||| | ||||  ||| |||| ||| || |||||||||| || |||||| |||||||| | |||  |||| ||||  |    
T  30849971 tttttaaattacgcatactataaaatatttttt--aaaattaaaataataacatgataaacgatcatataatacttcaattatactaaatttgttttaaa 30850068  T
Q  104 aaaacatgctatatagtacgtagtttaaacaagcaaactaaattttctcctccattcccctcctaaaccctcaatccaaaca 185  Q
    |||||||  |||||| | | || ||||||  |  ||| |||| | || | ||  || |||||||||||||||||||||||||    
T  30850069 aaaacatattatataattcataatttaaaataaaaaagtaaactctcccttctctttccctcctaaaccctcaatccaaaca 30850150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 152 - 185
Target Start/End: Complemental strand, 9719070 - 9719037
Alignment:
Q  152 cctccattcccctcctaaaccctcaatccaaaca 185  Q
    ||||| ||||||||||||||||||||||||||||    
T  9719070 cctcccttcccctcctaaaccctcaatccaaaca 9719037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 101; Significance: 4e-50; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 38509948 - 38510132
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttatttt 100  Q
    |||||||||||||||||| ||||| |||||||||||| ||| ||||||| ||| || ||||||| || |||||| |||||||||||||||||||||||||    
T  38509948 tcatttttaaattacggacactatgaaatgtcttttaaaaaattaacatcttaacacgataaacgataatataatacttcaatcacacttgatttatttt 38510047  T
Q  101 ggaaaaacatgctatatagtacgtagtttaaacaagcaaactaaattttctcctccattcccctcctaaaccctcaatccaaaca 185  Q
     |||||||||| |||||||| ||||||||||| ||| ||||||||   || ||||| ||||||||||||||||| ||||||||||    
T  38510048 agaaaaacatgttatatagtccgtagtttaaaaaagaaaactaaaccctcccctcccttcccctcctaaacccttaatccaaaca 38510132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 30010522 - 30010338
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttatttt 100  Q
    ||||||| |||||||||| ||||  |||||| ||||| | ||||||||||||| ||| |||||| || |||||| ||||||| ||||||| |||||||||    
T  30010522 tcattttgaaattacggacactacgaaatgttttttaaatagttaacatattaacattataaacgatcatataatacttcaaccacacttaatttatttt 30010423  T
Q  101 ggaaaaacatgctatatagtacgtagtttaaacaagcaaactaaattttctcctccattcccctcctaaaccctcaatccaaaca 185  Q
     |||||||||| |||||||| |||| |||||||||| ||| |||||  || ||||| ||||||||||||||||||||||||||||    
T  30010422 agaaaaacatgttatatagtccgtaatttaaacaagaaaagtaaatcctcccctcccttcccctcctaaaccctcaatccaaaca 30010338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 32951372 - 32951556
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttatttt 100  Q
    |||||||||||||||||| || || |||||| || || ||||||||||||||| |||||||||| ||  ||||| ||||||||||||||| |||||||||    
T  32951372 tcatttttaaattacggacacaatgaaatgttttataaaaagttaacatattaacatgataaacgatcgtataatacttcaatcacacttaatttatttt 32951471  T
Q  101 ggaaaaacatgctatatagtacgtagtttaaacaagcaaactaaattttctcctccattcccctcctaaaccctcaatccaaaca 185  Q
     |||||||||| | |||||| |||| |||||| | | ||| |||| | || ||||| |||| ||||||||| |||||||||||||    
T  32951472 agaaaaacatgttctatagtccgtaatttaaaaacgaaaagtaaactctcccctcccttcctctcctaaactctcaatccaaaca 32951556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 195
Target Start/End: Complemental strand, 12234200 - 12234006
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttatttt 100  Q
    |||||||||||||||||| ||||  |||||| ||||| ||||||| ||||||| ||| ||| |  || |||| | || ||||||||||||||||||||||    
T  12234200 tcatttttaaattacggacactacgaaatgttttttataaagttagcatattaacataatatatgatcatattatacatcaatcacacttgatttatttt 12234101  T
Q  101 ggaaaaacatgctatatagtacgtagtttaaacaagcaaactaaattttctcctccattcccctcctaaaccctcaatccaaacaaaaccttaaa 195  Q
     |||||||||| |||||||| |||| |||||| ||| ||| |||    |  ||||| |||||||||||||||||||||||||||| | |||||||    
T  12234100 agaaaaacatgttatatagtccgtaatttaaaaaagaaaattaagccctaccctcccttcccctcctaaaccctcaatccaaacacacccttaaa 12234006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 49946642 - 49946826
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttatttt 100  Q
    |||||||||||||||||| |||||||||| | ||||  ||||||||||||||| |||||||||  || |||||| |||||||||||| || |||||||||    
T  49946642 tcatttttaaattacggacactataaaatatttttttaaaagttaacatattaacatgataaattatcatataatacttcaatcacatttaatttatttt 49946741  T
Q  101 ggaaaaacatgctatatagtacgtagtttaaacaagcaaactaaattttctcctccattcccctcctaaaccctcaatccaaaca 185  Q
      ||||||||| ||||||||   | ||||||||||| ||| ||||   || | ||| |||||| ||||| |||||||||||||||    
T  49946742 aaaaaaacatgttatatagtctctggtttaaacaagaaaagtaaaccctcacatcccttccccgcctaatccctcaatccaaaca 49946826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 5 - 185
Target Start/End: Complemental strand, 51597854 - 51597674
Alignment:
Q  5 ttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttattttggaa 104  Q
    |||||||||| | | ||||| |||||  ||||| |||||||||||||||  |||||||||||| |||||| ||||||||||||||| |||||||||  ||    
T  51597854 ttttaaattatgaacactatgaaatggtttttaaaaagttaacatattaagatgataaacaatcatataatacttcaatcacacttaatttattttaaaa 51597755  T
Q  105 aaacatgctatatagtacgtagtttaaacaagcaaactaaattttctcctccattcccctcctaaaccctcaatccaaaca 185  Q
    ||||||| |||||||| |||  |||||| ||| ||| |||| | || ||||| ||||  || |||||||||||||||||||    
T  51597754 aaacatgttatatagtccgtgatttaaaaaagaaaagtaaactctcccctcccttcctttcataaaccctcaatccaaaca 51597674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 2858986 - 2859169
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttatttt 100  Q
    |||||| |||||||| ||  |||| ||||||  |||| |||||||||||| |  ||| ||||||||| |||||| ||||||||||||||| |||||||||    
T  2858986 tcatttctaaattacagaccctatgaaatgttatttaaaaagttaacatacttacattataaacaatcatataatacttcaatcacacttaatttatttt 2859085  T
Q  101 ggaaaaacatgctatatagtacgtagtttaaacaagcaaactaaattttctcctccattcccctcctaaaccctcaatccaaac 184  Q
     |||||||||| |||||||| |||| |||||| ||  ||| ||||   || ||||| ||||||||||||||| |||||||||||    
T  2859086 tgaaaaacatgttatatagtccgtaatttaaaaaataaaagtaaaccctcccctcccttcccctcctaaaccttcaatccaaac 2859169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 194
Target Start/End: Complemental strand, 41498594 - 41498401
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttatttt 100  Q
    |||||||||||||||||| ||||| |||||| || || ||||||||||||||| |||||||||| || |||||| ||||||||||||||| | ||||  |    
T  41498594 tcatttttaaattacggacactatgaaatgttttataaaaagttaacatattaacatgataaacgatcatataatacttcaatcacacttaacttatcgt 41498495  T
Q  101 ggaaaaacatgctatatagtacgtagtttaaacaagcaaactaaattttctcctccattcccctcctaaaccctcaatccaaacaaaaccttaa 194  Q
     ||||| |||| || ||||| | || |||||| | | ||| ||||   || ||||  |||||||||||||||||||||||||||| | ||||||    
T  41498494 agaaaatcatgttaaatagttcataatttaaaaacgaaaagtaaaccctcccctcacttcccctcctaaaccctcaatccaaacacacccttaa 41498401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 36285628 - 36285738
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttatttt 100  Q
    |||||||||||||||| | |||||||||| | ||||| ||||||||||||||| |||||||||| || |||||| |||||||||||||||||| ||||||    
T  36285628 tcatttttaaattacgaacactataaaatattttttaaaaagttaacatattaacatgataaacgatcatataatacttcaatcacacttgatatatttt 36285727  T
Q  101 ggaaaaacatg 111  Q
      |||||||||    
T  36285728 aaaaaaacatg 36285738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 35349518 - 35349700
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttatttt 100  Q
    |||||||||||||||||| |||   |||||| || || ||||||||||||||| ||||||||||||| |||||| |||||||| || |||  ||||||||    
T  35349518 tcatttttaaattacggacactg--aaatgttttataaaaagttaacatattaacatgataaacaatcatataatacttcaataacccttagtttatttt 35349615  T
Q  101 ggaaaaacatgctatatagtacgtagtttaaacaagcaaactaaattttctcctccattcccctcctaaaccctcaatccaaaca 185  Q
     |||||| ||| |||||||| |||| |||||| | | ||| ||||   || ||||| |||||||| |||||||| ||||||||||    
T  35349616 agaaaaaaatgttatatagtccgtaatttaaaaacgaaaagtaaaccctcccctcccttcccctcataaacccttaatccaaaca 35349700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 8529989 - 8529845
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttatttt 100  Q
    |||||||||||||||||| ||||| |||| | ||||| ||||||||||||||| |||| ||||| || |||||| ||||||||||||||| ||||||||     
T  8529989 tcatttttaaattacggacactatgaaatattttttaaaaagttaacatattaacatggtaaacgatcatataatacttcaatcacacttaatttattta 8529890  T
Q  101 ggaaaaacatgctatatagtacgtagtttaaacaagcaaactaaa 145  Q
      ||||||||| ||||||||  ||| |||||| ||| ||| ||||    
T  8529889 aaaaaaacatgttatatagtttgtaatttaaaaaagaaaagtaaa 8529845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 40094987 - 40095107
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttatttt 100  Q
    |||||||||||||||||| ||||| |||||| || || |||||||||| |||| |||||||||| || |||||| ||||||||||||||| |||||||||    
T  40094987 tcatttttaaattacggacactatgaaatgttttataaaaagttaacaaattaacatgataaacgatcatataatacttcaatcacacttaatttatttt 40095086  T
Q  101 -ggaaaaacatgctatatagt 120  Q
     | ||||||||| ||||||||    
T  40095087 agaaaaaacatgttatatagt 40095107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 45585739 - 45585863
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttatttt 100  Q
    ||||||||||||||  ||||||||||||||| ||||  ||||||||||||||| |||||||||| || |||||  ||||| ||||||||| |||||||||    
T  45585739 tcatttttaaattatagatactataaaatgtttttttaaaagttaacatattaacatgataaacgatcatatagtacttcgatcacacttaatttatttt 45585838  T
Q  101 ggaaaaacatgctatatagtacgta 125  Q
      ||||||||| |||||||| ||||    
T  45585839 aaaaaaacatgttatatagtccgta 45585863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 50744334 - 50744466
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttagaa-agttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttattt 99  Q
    |||||||||||||||||| ||||| |||||| ||||  || ||||||||||||| |||||||||| || |||||| ||||||||||||||| ||||||||    
T  50744334 tcatttttaaattacggacactatgaaatgtttttttaaagagttaacatattaacatgataaacgatcatataatacttcaatcacacttaatttattt 50744433  T
Q  100 tggaaaaacatgctatatagtacgtagtttaaa 132  Q
    | || |||| || |||||||| |||| ||||||    
T  50744434 tagagaaacctgttatatagtccgtaatttaaa 50744466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 7444685 - 7444575
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttatttt 100  Q
    ||||||| |||||||||| |||||||||||  ||||| ||||||||||||||| ||| |||||| || |||||| |||||||||||||||| |||| |||    
T  7444685 tcattttaaaattacggacactataaaatgatttttaaaaagttaacatattaacataataaacgatcatataatacttcaatcacacttggtttaattt 7444586  T
Q  101 ggaaaaacatg 111  Q
     ||||||||||    
T  7444585 agaaaaacatg 7444575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 20 - 111
Target Start/End: Complemental strand, 42230709 - 42230618
Alignment:
Q  20 actataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttattttggaaaaacatg 111  Q
    |||||||||||| ||||| |||||||| |||||| ||| ||||||||| |||||| ||||||||||||||| |||||||||  |||||||||    
T  42230709 actataaaatgttttttataaagttaaaatattaacataataaacaatcatataatacttcaatcacacttaatttatttttaaaaaacatg 42230618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 33 - 183
Target Start/End: Complemental strand, 10392030 - 10391880
Alignment:
Q  33 ttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttattttggaaaaacatgctatatagtacgtagtttaaa 132  Q
    ||||| ||||||||||||||| ||||||||||  | |||||| |||| ||||||| || ||||||||| ||||||||||  ||||||| |||| ||||||    
T  10392030 ttttaaaaagttaacatattaacatgataaacggtcatataatactttaatcacaattaatttattttagaaaaacatgtaatatagtccgtaatttaaa 10391931  T
Q  133 caagcaaactaaattttctcctccattcccctcctaaaccctcaatccaaa 183  Q
     | | ||| ||||   || ||||  ||||||||||||| ||||||||||||    
T  10391930 aatgaaaagtaaaccctcccctcgtttcccctcctaaaacctcaatccaaa 10391880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 41676471 - 41676363
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttaga--aagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttatt 98  Q
    |||||||||||||||||| |||||||||||| ||||     || ||||||||||| |||||||||| || |||||| ||| ||||||||||| |||||||    
T  41676471 tcatttttaaattacggacactataaaatgtttttttttttaaattaacatattaacatgataaacgatcatataatactacaatcacacttaatttatt 41676372  T
Q  99 ttggaaaaa 107  Q
    || ||||||    
T  41676371 ttagaaaaa 41676363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 39 - 116
Target Start/End: Original strand, 26940935 - 26941012
Alignment:
Q  39 aaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttattttggaaaaacatgctata 116  Q
    ||||||||| ||||| |||  |||||| | |||||| ||||||||||||||||||||||||| |||||||||| ||||    
T  26940935 aaagttaacttattaacatcgtaaacagtcatataatacttcaatcacacttgatttattttagaaaaacatgttata 26941012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 185
Target Start/End: Original strand, 1085547 - 1085728
Alignment:
Q  4 tttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttattttgga 103  Q
    ||||||||||||||| | || ||||||  ||||||||| || |  ||  |||||||||||  || |||||| |||||||  |||||| |||||||||  |    
T  1085547 tttttaaattacggacattagaaaatgatttttagaaaattgaactaacagcatgataaatgatcatataatacttcaaaaacacttaatttattttaaa 1085646  T
Q  104 aaaacatgctatatagtacgtagtttaaacaagcaaactaaattttctcctccattcccctcctaaaccctcaatccaaaca 185  Q
    |||||||  || || || |||| |||||| ||  ||| | | |  |||||||| |||||||||||||||||| |||||||||    
T  1085647 aaaacattttacatggttcgtaatttaaaaaataaaagtgagtcatctcctcccttcccctcctaaaccctctatccaaaca 1085728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 55 - 119
Target Start/End: Original strand, 44211013 - 44211077
Alignment:
Q  55 catgataaacaatgatataaaacttcaatcacacttgatttattttggaaaaacatgctatatag 119  Q
    |||||||||| || |||||| ||||||||||||||| ||||||||| |||||||| | |||||||    
T  44211013 catgataaacgatcatataatacttcaatcacacttaatttattttagaaaaacacgttatatag 44211077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 20576187 - 20576269
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatca 85  Q
    |||||||||||||||||| ||  | |||||| ||||| | |||||| |||||| |||||||||| || |||||| ||||||||||    
T  20576187 tcatttttaaattacggacac--tgaaatgttttttaaagagttaatatattaacatgataaacgatcatataatacttcaatca 20576269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 199
Target Start/End: Original strand, 20607422 - 20607469
Alignment:
Q  152 cctccattcccctcctaaaccctcaatccaaacaaaaccttaaagttt 199  Q
    ||||| |||||||||||||||||| ||||||||| | |||||||||||    
T  20607422 cctcccttcccctcctaaaccctccatccaaacacacccttaaagttt 20607469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 194
Target Start/End: Complemental strand, 35927853 - 35927811
Alignment:
Q  152 cctccattcccctcctaaaccctcaatccaaacaaaaccttaa 194  Q
    ||||||||||||||||||| |||||||||||||| | ||||||    
T  35927853 cctccattcccctcctaaaacctcaatccaaacacacccttaa 35927811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 152 - 185
Target Start/End: Complemental strand, 26324053 - 26324020
Alignment:
Q  152 cctccattcccctcctaaaccctcaatccaaaca 185  Q
    ||||| ||||||||||||||||||||||||||||    
T  26324053 cctcccttcccctcctaaaccctcaatccaaaca 26324020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 93; Significance: 2e-45; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 1051554 - 1051736
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttatttt 100  Q
    |||||||||||||||||| || || |||||| ||||| ||||||||||||||| ||||||||||||| ||||||  |||||||||||||| |||||||||    
T  1051554 tcatttttaaattacggacac-atgaaatgttttttaaaaagttaacatatta-catgataaacaatcatataatgcttcaatcacacttaatttatttt 1051651  T
Q  101 ggaaaaacatgctatatagtacgtagtttaaacaagcaaactaaattttctcctccattcccctcctaaaccctcaatccaaaca 185  Q
     |||||||| | |||||||| |||| |||||| ||| ||| |||||  |||||||| ||||||||||||||||||||||||||||    
T  1051652 agaaaaacaggttatatagttcgtaatttaaaaaagaaaaataaatcctctcctcccttcccctcctaaaccctcaatccaaaca 1051736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 33655162 - 33655346
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttatttt 100  Q
    |||||||||||||||||| ||||| |||||| ||||| ||||||||||||||| |||||||||  || |||||| ||||||||||||||| |||||||||    
T  33655162 tcatttttaaattacggacactatgaaatgttttttaaaaagttaacatattaacatgataaatgatcatataatacttcaatcacacttaatttatttt 33655261  T
Q  101 ggaaaaacatgctatatagtacgtagtttaaacaagcaaactaaattttctcctccattcccctcctaaaccctcaatccaaaca 185  Q
     |||||||||| |||||||  | || |||||| ||| ||| ||||   || ||||  ||||||||||||||||||||||||||||    
T  33655262 agaaaaacatgttatatagcccataatttaaaaaagaaaagtaaaccctcgcctctcttcccctcctaaaccctcaatccaaaca 33655346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 3 - 194
Target Start/End: Original strand, 13771004 - 13771193
Alignment:
Q  3 atttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttattttgg 102  Q
    |||||||||||||||| |||||||||| |  | || ||||||||||||||| |||||||||||||||||||| |||  |||||||||| |||||||||      
T  13771004 atttttaaattacggacactataaaatat--tataaaaagttaacatattaacatgataaacaatgatataacactcgaatcacacttaatttattttaa 13771101  T
Q  103 aaaaacatgctatatagtacgtagtttaaacaagcaaactaaattttctcctccattcccctcctaaaccctcaatccaaacaaaaccttaa 194  Q
    ||||||||| |||||||| |||| |||||| | | ||| |||| | || ||||| |||||||||||||||||||||| ||||| | ||||||    
T  13771102 aaaaacatgttatatagtccgtaatttaaaaacgaaaagtaaactctcacctcccttcccctcctaaaccctcaatctaaacacacccttaa 13771193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 24970219 - 24970403
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttatttt 100  Q
    |||||||||||||||||||||||| |||| | ||||| ||||||||||||||| | |||||||| || |||||| ||||||||||||||| |||||||||    
T  24970219 tcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacttgataaacgatcatataatacttcaatcacacttaatttatttt 24970318  T
Q  101 ggaaaaacatgctatatagtacgtagtttaaacaagcaaactaaattttctcctccattcccctcctaaaccctcaatccaaaca 185  Q
     |||||||||| |||||| | | || |||||| ||| |||  ||| | |  |||||    |||||||||||||||||||||||||    
T  24970319 agaaaaacatgttatataatccataatttaaaaaagaaaaacaaactcttccctcctaaaccctcctaaaccctcaatccaaaca 24970403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 47391046 - 47390861
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaa-tgatataaaacttcaatcacacttgatttattt 99  Q
    |||||||||||||||||| |||||||||  | ||||| || |||||||||||| |||||||||||| | |||||| |||||||||||| || || |||||    
T  47391046 tcatttttaaattacggacactataaaacattttttaaaatgttaacatattaacatgataaacaagtcatataatacttcaatcacaattaatgtattt 47390947  T
Q  100 tggaaaaacatgctatatagtacgtagtttaaacaagcaaactaaattttctcctccattcccctcctaaaccctcaatccaaaca 185  Q
    | |||||||||| |||||||| | || |||||| ||| ||| ||||   ||  |||| |||||||||||| |||||||||||||||    
T  47390946 tagaaaaacatgttatatagttcataatttaaaaaagaaaagtaaaccctccactcccttcccctcctaacccctcaatccaaaca 47390861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 40196586 - 40196717
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttatttt 100  Q
    |||||||| ||||||||| |||||||||||| || || ||||||||||||| | | ||||||||||| |||||| ||||||||||||||| |||||||||    
T  40196586 tcatttttgaattacggacactataaaatgttttataaaaagttaacatatcaacctgataaacaatcatataatacttcaatcacacttaatttatttt 40196685  T
Q  101 ggaaaaacatgctatatagtacgtagtttaaa 132  Q
     |||||||||| |||||| | |||| ||||||    
T  40196686 agaaaaacatgttatatattccgtaatttaaa 40196717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 34235061 - 34235193
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttatttt 100  Q
    |||||||||||||||||| ||||| |||||| || || |||||||||||||||  |||||||||||| |||||| ||||||||||||||| |||||||||    
T  34235061 tcatttttaaattacggacactatgaaatgttttataaaaagttaacatattaatatgataaacaatcatataatacttcaatcacacttaatttatttt 34235160  T
Q  101 -ggaaaaacatgctatatagtacgtagtttaaa 132  Q
     | ||||||||| |||||| | |||| ||||||    
T  34235161 agaaaaaacatgttatataatccgtaatttaaa 34235193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 4 - 110
Target Start/End: Original strand, 22163167 - 22163272
Alignment:
Q  4 tttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttattttgga 103  Q
    ||||||||||||||| ||||| |||||| ||||||||||| ||||||||| |||||||||| || |||||| ||||||||||||||| ||||||||| ||    
T  22163167 tttttaaattacggacactatgaaatgttttttagaaagt-aacatattaacatgataaacgatcatataatacttcaatcacacttaatttattttaga 22163265  T
Q  104 aaaacat 110  Q
    |||||||    
T  22163266 aaaacat 22163272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 4 - 110
Target Start/End: Original strand, 22221875 - 22221980
Alignment:
Q  4 tttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttattttgga 103  Q
    ||||||||||||||| ||||| |||||| ||||||||||| ||||||||| |||||||||| || |||||| ||||||||||||||| ||||||||| ||    
T  22221875 tttttaaattacggacactatgaaatgttttttagaaagt-aacatattaacatgataaacgatcatataatacttcaatcacacttaatttattttaga 22221973  T
Q  104 aaaacat 110  Q
    |||||||    
T  22221974 aaaacat 22221980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 39 - 185
Target Start/End: Complemental strand, 25887344 - 25887198
Alignment:
Q  39 aaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttattttggaaaaacatgctatatagtacgtagtttaaacaagca 138  Q
    |||||||||||||||  |||||||||||| |||||| ||| ||||||||||| ||||||||| |||||||||| |||||||| |||  |||| | ||| |    
T  25887344 aaagttaacatattaatatgataaacaatcatataatactccaatcacacttaatttattttagaaaaacatgttatatagtccgtgatttataaaagaa 25887245  T
Q  139 aactaaattttctcctccattcccctcctaaaccctcaatccaaaca 185  Q
    ||  ||||  || ||||| |||||||| |||||||||||||||||||    
T  25887244 aaacaaatcctcccctcccttcccctcataaaccctcaatccaaaca 25887198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 39 - 185
Target Start/End: Complemental strand, 41008333 - 41008188
Alignment:
Q  39 aaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttattttggaaaaa-catgctatatagtacgtagtttaaacaagc 137  Q
    ||||||||||||||| ||||||||||||| ||||||  |||||||||||||| |||||||||  ||||| |||| |||||||| |||| |||||| |||     
T  41008333 aaagttaacatattaacatgataaacaatcatataa--cttcaatcacacttaatttattttaaaaaaaacatgttatatagtccgtaatttaaaaaaga 41008236  T
Q  138 aaactaaattttctcctccattcccctcctaaaccctcaatccaaaca 185  Q
    |||  ||||| || ||||| ||||||||  ||||||||||||||||||    
T  41008235 aaaacaaattctcccctcccttcccctctcaaaccctcaatccaaaca 41008188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 69 - 200
Target Start/End: Original strand, 39855987 - 39856118
Alignment:
Q  69 atataaaacttcaatcacacttgatttattttggaaaaacatgctatatagtacgtagtttaaacaagcaaactaaattttctcctccattcccctccta 168  Q
    |||||| |||| | |||||||| ||||||||| |||||||||| |||||||| |||| |||||| ||| ||| ||||   || ||||| |||||||||||    
T  39855987 atataatacttaagtcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaaagaaaagtaaaccctcccctcccttcccctccta 39856086  T
Q  169 aaccctcaatccaaacaaaaccttaaagtttt 200  Q
    ||||||||||||||||| | ||||||||||||    
T  39856087 aaccctcaatccaaacacacccttaaagtttt 39856118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 3 - 145
Target Start/End: Original strand, 41497013 - 41497155
Alignment:
Q  3 atttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttattttgg 102  Q
    |||||||||||||||| | ||  |||||| ||||| ||| ||||||||||| |||||||||  || ||||||  |||||||||||||| ||||||||| |    
T  41497013 atttttaaattacggacaataggaaatgttttttaaaaatttaacatattaacatgataaatgatcatataattcttcaatcacacttaatttattttag 41497112  T
Q  103 aaaaacatgctatatagtacgtagtttaaacaagcaaactaaa 145  Q
    ||||||||| |||||||| |||| |||||| ||| ||| ||||    
T  41497113 aaaaacatgttatatagtccgtaatttaaaaaagaaaagtaaa 41497155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 40572289 - 40572471
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttatttt 100  Q
    ||||||||||||||||||| ||||||||| | ||||| ||||||||||||||| |||||||||   | |||||| |||| |||||| ||| |||||||||    
T  40572289 tcatttttaaattacggatgctataaaatatttttta-aaagttaacatattaacatgataaaaggtcatataatactttaatcacgcttaatttatttt 40572387  T
Q  101 ggaaaaacatgctatatagtacgtagtttaaacaagcaaactaaattttctcctccattcccctcctaaaccctcaatccaaaca 185  Q
     || ||||||  |||||||| |||| ||| || ||  |||  ||| ||| || | | |||||||| |||||||||||||||||||    
T  40572388 agagaaacatattatatagtccgtaattttaaaaataaaaacaaacttt-tctttctttcccctcttaaaccctcaatccaaaca 40572471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 39 - 185
Target Start/End: Original strand, 34228410 - 34228557
Alignment:
Q  39 aaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttattttggaaaaacatgctatatagtac-gtagtttaaacaagc 137  Q
    |||||||||||||||  ||||||| |||| |||||| ||||||||||||||| ||||||||| |||||||||| |||||||| | ||| ||| || | |     
T  34228410 aaagttaacatattaatatgataagcaatcatataatacttcaatcacacttaatttattttagaaaaacatgttatatagttccgtaattttaaaatga 34228509  T
Q  138 aaactaaattttctcctccattcccctcctaaaccctcaatccaaaca 185  Q
    ||| |||||  || ||||| ||| ||||||||||| ||||| ||||||    
T  34228510 aaagtaaatcctcccctcccttctcctcctaaaccttcaattcaaaca 34228557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 185
Target Start/End: Complemental strand, 26365955 - 26365773
Alignment:
Q  4 tttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttattttgga 103  Q
    ||||||||||| |||||||| ||||| | ||||  ||| |||| ||| || ||||| ||||||| |||||| ||||||||||||| |  |||||||| ||    
T  26365955 tttttaaattatggatactacaaaatattttttttaaaattaaaataataacatgagaaacaatcatataatacttcaatcacacctagtttattttaga 26365856  T
Q  104 aaaacatgctatatagtacgtagtttaaacaagcaaactaaattttctcctccatt-cccctcctaaaccctcaatccaaaca 185  Q
    |||| ||| ||||||||  ||| | |||| ||| ||| |||| | ||  |||| || ||||||||||||||||||||||||||    
T  26365855 aaaatatgttatatagtttgtaatataaaaaagaaaagtaaactctcaactcccttccccctcctaaaccctcaatccaaaca 26365773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 10315823 - 10315719
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttatttt 100  Q
    ||||||||||| |||||| ||||| |||||| ||||| ||| ||||||||||| || ||||||| || |||||| |||||||||||||| | ||||||||    
T  10315823 tcatttttaaaatacggacactatgaaatgttttttaaaaatttaacatattaacaagataaacgattatataatacttcaatcacactgggtttatttt 10315724  T
Q  101 ggaaa 105  Q
     ||||    
T  10315723 agaaa 10315719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 48 - 185
Target Start/End: Original strand, 31571569 - 31571708
Alignment:
Q  48 atattagcatgataaacaatgatataaaacttcaatcacacttgatttattttggaaaaa--catgctatatagtacgtagtttaaacaagcaaactaaa 145  Q
    |||||| ||||||||||||| |||||| ||||||||||||||| || | ||||  |||||  |||| ||||| || |||| |||||| ||| ||| ||||    
T  31571569 atattaacatgataaacaattatataatacttcaatcacacttaatatttttttaaaaaaagcatgttatatggtccgtaatttaaaaaagaaaagtaaa 31571668  T
Q  146 ttttctcctccattcccctcctaaaccctcaatccaaaca 185  Q
     | || ||||  ||||||||||||||||||||||||||||    
T  31571669 ctctcccctcgcttcccctcctaaaccctcaatccaaaca 31571708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 4833585 - 4833684
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttatttt 100  Q
    ||||||||||||||| || ||||| |||||| || || ||||||||| ||||| ||||||||||||| |||||| |||| ||||||| || |||||||||    
T  4833585 tcatttttaaattacagacactatgaaatgttttataaaaagttaacctattaacatgataaacaatcatataatacttaaatcacatttaatttatttt 4833684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 120
Target Start/End: Original strand, 37417706 - 37417806
Alignment:
Q  20 actataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttattttggaaaaacatgctatatag 119  Q
    ||||| |||||| || || ||||||||||||||  |||||||||| || |||||| ||||||||||||||| | ||| ||| |||||||||| |||||||    
T  37417706 actatgaaatgttttctaaaaagttaacatattcacatgataaacgatcatataatacttcaatcacacttaacttaattttgaaaaacatgttatatag 37417805  T
Q  120 t 120  Q
    |    
T  37417806 t 37417806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 18231776 - 18231693
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatc 84  Q
    |||||||||||||||  | ||||| |||||| ||||| ||||||||||||||| |||||||||| || |||||| |||||||||    
T  18231776 tcatttttaaattacaaacactatgaaatgttttttaaaaagttaacatattaacatgataaacgatcatataatacttcaatc 18231693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 42306520 - 42306405
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttatttt 100  Q
    |||||||||||||||||| ||||| |||||| ||||| ||||||| ||||||| | | ||||||    |||||| ||| ||||||| ||| |||||||||    
T  42306520 tcatttttaaattacggacactatgaaatgttttttaaaaagttagcatattaacctcataaac----atataatactccaatcacgcttaatttatttt 42306425  T
Q  101 ggaaaaacatgctatatagt 120  Q
     |||| ||||| ||||||||    
T  42306424 agaaatacatgttatatagt 42306405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 39 - 145
Target Start/End: Complemental strand, 43230388 - 43230282
Alignment:
Q  39 aaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttattttggaaaaacatgctatatagtacgtagtttaaacaagca 138  Q
    ||||||||||||||| |||||||||| ||  |||||  |||||||| ||||| ||||||||| |||||||||| |||||| | |||| |||||| ||| |    
T  43230388 aaagttaacatattaacatgataaacgatcgtataattcttcaatcgcacttaatttattttagaaaaacatgttatataatccgtaatttaaaaaagaa 43230289  T
Q  139 aactaaa 145  Q
    || ||||    
T  43230288 aagtaaa 43230282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 100
Target Start/End: Original strand, 13425176 - 13425273
Alignment:
Q  3 atttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttatttt 100  Q
    ||||||||||||| || |||| ||||| | ||||  ||||| ||||||||| ||||||||||||| |||| | |||||| |||||||| |||||||||    
T  13425176 atttttaaattacagacactacaaaatattttttcaaaagtcaacatattaacatgataaacaatcatattatacttcattcacacttaatttatttt 13425273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 17853060 - 17852930
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttatttt 100  Q
    ||||||||||||||||   ||||| ||| || ||||| |||| ||| |||  | |||||||||| || |||||| || |||||||||||| |||||||||    
T  17853060 tcatttttaaattacgagcactatgaaaagt-ttttaaaaagataaaataacaacatgataaacgatcatataatacctcaatcacacttaatttatttt 17852962  T
Q  101 ggaaaaacatgctatatagtacgtagtttaaa 132  Q
     |||||||||| ||| || | |||| ||||||    
T  17852961 agaaaaacatgttatttaatccgtaatttaaa 17852930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 42087185 - 42087086
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttatttt 100  Q
    ||||||||||||||||| || |||| || || ||||| ||||||| ||||||| | ||| |||| || |||||| | |||||| |||||| |||||||||    
T  42087185 tcatttttaaattacgggtattatacaaagttttttaaaaagttagcatattaacgtgacaaacgattatataataattcaattacacttaatttatttt 42087086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 65
Target Start/End: Original strand, 32872838 - 32872899
Alignment:
Q  4 tttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaaca 65  Q
    ||||||||||||| ||| ||||||||   ||||| ||||||||||||||| |||||||||||    
T  32872838 tttttaaattacgaatattataaaatactttttaaaaagttaacatattaacatgataaaca 32872899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 59 - 132
Target Start/End: Complemental strand, 38378177 - 38378104
Alignment:
Q  59 ataaacaatgatataaaacttcaatcacacttgatttattttggaaaaacatgctatatagtacgtagtttaaa 132  Q
    |||||| || |||||| || ||||| ||| ||||||||||||  ||||||||| |||||||| |||||||||||    
T  38378177 ataaacgatcatataatacctcaattacaattgatttatttttaaaaaacatgttatatagttcgtagtttaaa 38378104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 150 - 185
Target Start/End: Original strand, 31364247 - 31364282
Alignment:
Q  150 ctcctccattcccctcctaaaccctcaatccaaaca 185  Q
    ||||||| ||||||||||||||||||||||||||||    
T  31364247 ctcctcccttcccctcctaaaccctcaatccaaaca 31364282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 199
Target Start/End: Complemental strand, 37925880 - 37925833
Alignment:
Q  152 cctccattcccctcctaaaccctcaatccaaacaaaaccttaaagttt 199  Q
    ||||| |||||||||||||||||||||||||||| | ||||| |||||    
T  37925880 cctcccttcccctcctaaaccctcaatccaaacacacccttagagttt 37925833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 152 - 185
Target Start/End: Original strand, 36267758 - 36267791
Alignment:
Q  152 cctccattcccctcctaaaccctcaatccaaaca 185  Q
    ||||| ||||||||||||||||||||||||||||    
T  36267758 cctcccttcccctcctaaaccctcaatccaaaca 36267791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 152 - 185
Target Start/End: Original strand, 42306535 - 42306568
Alignment:
Q  152 cctccattcccctcctaaaccctcaatccaaaca 185  Q
    |||| |||||||||||||||||||||||||||||    
T  42306535 cctcaattcccctcctaaaccctcaatccaaaca 42306568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 185
Target Start/End: Complemental strand, 40282235 - 40282203
Alignment:
Q  153 ctccattcccctcctaaaccctcaatccaaaca 185  Q
    |||| ||||||||||||||||||||||||||||    
T  40282235 ctcccttcccctcctaaaccctcaatccaaaca 40282203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 194
Target Start/End: Original strand, 48881760 - 48881796
Alignment:
Q  158 ttcccctcctaaaccctcaatccaaacaaaaccttaa 194  Q
    |||||||||||||||||||||||||||| | ||||||    
T  48881760 ttcccctcctaaaccctcaatccaaacacacccttaa 48881796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 93; Significance: 2e-45; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 23748285 - 23748141
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttatttt 100  Q
    ||||||||||| |||||| ||||| |||||||||||| ||||||||||||||| |||||||||| || |||||| |||||||||||||||||||||||||    
T  23748285 tcatttttaaactacggacactatgaaatgtcttttaaaaagttaacatattaacatgataaacgataatataatacttcaatcacacttgatttatttt 23748186  T
Q  101 ggaaaaacatgctatatagtacgtagtttaaacaagcaaactaaa 145  Q
     |||||||||| |||||||| ||||||||||| ||| ||||||||    
T  23748185 tgaaaaacatgttatatagtccgtagtttaaaaaagaaaactaaa 23748141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 36347595 - 36347779
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttatttt 100  Q
    ||||||||| |||||||||||||| | || | ||||| | ||||||||||||| ||||||||||||| |||||| ||||||||||||||| |||||||||    
T  36347595 tcatttttatattacggatactatgacatattttttaaatagttaacatattaacatgataaacaattatataatacttcaatcacacttaatttatttt 36347694  T
Q  101 ggaaaaacatgctatatagtacgtagtttaaacaagcaaactaaattttctcctccattcccctcctaaaccctcaatccaaaca 185  Q
     |||||||||| |||||||| |||| |||||| ||| ||| |||| | || | ||| ||||||||||||||||||||||||||||    
T  36347695 agaaaaacatgttatatagtccgtaatttaaaaaagaaaagtaaactctcccttcccttcccctcctaaaccctcaatccaaaca 36347779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 15224748 - 15224932
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttatttt 100  Q
    |||||||||||||||||| ||||| |||||| ||||| |||| |||||||||| |||||||||  || |||||| ||||||||||||||| ||||||| |    
T  15224748 tcatttttaaattacggacactatgaaatgttttttaaaaagctaacatattaacatgataaatgatcatataatacttcaatcacacttaatttattct 15224847  T
Q  101 ggaaaaacatgctatatagtacgtagtttaaacaagcaaactaaattttctcctccattcccctcctaaaccctcaatccaaaca 185  Q
     |||||||||| |||||||  |||| |||||| ||| ||| ||||   || ||||| |||||||||||||||||  |||||||||    
T  15224848 agaaaaacatgttatatagcccgtaatttaaaaaagaaaagtaaaccatcccctcccttcccctcctaaacccttgatccaaaca 15224932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 9427176 - 9426991
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttag-aaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttattt 99  Q
    |||||||||||||||||| |||||||||||| ||||   ||||||| ||||||||||||||||||||  |||||| ||||||||||| | | ||||| ||    
T  9427176 tcatttttaaattacggacactataaaatgtttttttttaaagttagcatattagcatgataaacaaacatataatacttcaatcacgcataatttagtt 9427077  T
Q  100 tggaaaaacatgctatatagtacgtagtttaaacaagcaaactaaattttctcctccattcccctcctaaaccctcaatccaaaca 185  Q
    | |||||||||| ||||||||  ||| |||||| ||| |||  |||   |||||||| ||||||||||||||  ||||||||||||    
T  9427076 ttgaaaaacatgttatatagttggtaatttaaaaaagaaaatcaaaccctctcctcccttcccctcctaaactttcaatccaaaca 9426991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 3 - 118
Target Start/End: Complemental strand, 16565965 - 16565850
Alignment:
Q  3 atttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttattttgg 102  Q
    |||||||||||||||||||||| ||| || ||||| ||||||||||||| |  ||||||||| || |||||| ||||||||||||||| ||||||||| |    
T  16565965 atttttaaattacggatactatgaaacgttttttaaaaagttaacatataaatatgataaacgatcatataatacttcaatcacacttaatttattttag 16565866  T
Q  103 aaaaacatgctatata 118  Q
    ||||||||| ||||||    
T  16565865 aaaaacatgttatata 16565850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 39732783 - 39732966
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttatttt 100  Q
    |||||||||||||||| | | ||| |||||| || || ||||||||||||||| |||||||||| || |||||| |||||||||| |||| |||||||||    
T  39732783 tcatttttaaattacgaacattatgaaatgttttataaaaagttaacatattaacatgataaacgatcatataatacttcaatcatacttaatttatttt 39732882  T
Q  101 ggaaaaacatgctatatagtacgtagtttaaacaagcaaactaaattttctcctccattcccctcctaaaccctcaatccaaaca 185  Q
     |||||||||| |||||||| |||| |||||| | | ||| |||||  || | | | ||||||||  ||||| ||||||||||||    
T  39732883 agaaaaacatg-tatatagtccgtaatttaaaaacgaaaagtaaatcatccctttccttcccctctcaaaccttcaatccaaaca 39732966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 36566904 - 36567090
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttt-tagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttattt 99  Q
    |||||||||||||||||| | ||| |||  | ||| || ||||||||||||||| |||||||||  || |||||| |||||||||||| || |||||||     
T  36566904 tcatttttaaattacggacattatgaaagttttttataaaaagttaacatattaacatgataaatgatcatataatacttcaatcacaattaatttatta 36567003  T
Q  100 tggaaaaacatgctatatagtacgtagtttaaacaag-caaactaaattttctcctccattcccctcctaaaccctcaatccaaaca 185  Q
    | |||||||||| |||||| | | || |||||| | |  ||| |||||  ||||||| |||||||||||||||||||||||||||||    
T  36567004 tagaaaaacatgttatataattcataatttaaaaacgaaaaagtaaatcatctcctctattcccctcctaaaccctcaatccaaaca 36567090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 4 - 99
Target Start/End: Complemental strand, 9631747 - 9631652
Alignment:
Q  4 tttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttattt 99  Q
    ||||||||||||||| || || ||||||| |||| ||||||||||||||| |||||||||| || |||||| |||||| |||||||||||||||||    
T  9631747 tttttaaattacggacaccatgaaatgtcctttaaaaagttaacatattaacatgataaacgataatataatacttcattcacacttgatttattt 9631652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 8 - 185
Target Start/End: Complemental strand, 12541949 - 12541776
Alignment:
Q  8 taaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttatttt-ggaaaa 106  Q
    |||||||| ||||||||||||||| ||||| |||||||||| |||| |||||||||| || |||||  ||||||||| ||||| ||||||||| | ||||    
T  12541949 taaattacagatactataaaatgttttttaaaaagttaacacattaacatgataaacgatcatatagtacttcaatcgcacttaatttattttagaaaaa 12541850  T
Q  107 acatgctatatagtacgtagtttaaacaagcaaactaaattttctcctccattcccctcctaaaccctcaatccaaaca 185  Q
    | ||  |||||||| |||| |||||| ||| ||| || | |     ||||  |||||||||||||||||||||||||||    
T  12541849 atattttatatagtccgtaatttaaaaaagaaaagtagact-----ctcccctcccctcctaaaccctcaatccaaaca 12541776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 9 - 106
Target Start/End: Complemental strand, 17379994 - 17379897
Alignment:
Q  9 aaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttattttggaaaa 106  Q
    |||||||||| ||||| |||||| ||||| ||||||| ||||||| ||||||||||||| |||||| ||| ||||||||||| ||||||||| |||||    
T  17379994 aaattacggacactatgaaatgttttttaaaaagttagcatattaacatgataaacaatcatataatactccaatcacacttaatttattttagaaaa 17379897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 34209654 - 34209560
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgattt 95  Q
    |||||||||||||||  | ||||| |||| | ||||| ||||||||||||||| ||||||||||||| |||||| ||||||||||||||| ||||    
T  34209654 tcatttttaaattacaaacactatgaaatattttttaaaaagttaacatattaacatgataaacaatcatataacacttcaatcacacttaattt 34209560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 185
Target Start/End: Original strand, 8426935 - 8427109
Alignment:
Q  3 atttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttattttgg 102  Q
    |||||||||||| ||| ||||| |||||| ||||| |||||||||||        ||||||  || |||||| ||||||||| ||||| ||||||||| |    
T  8426935 atttttaaattaaggacactatgaaatgttttttaaaaagttaacat--------gataaatgatcatataatacttcaatcgcacttaatttattttag 8427026  T
Q  103 aaaaacatgctatatagtacgtagtttaaacaagcaaactaaattttctcctccattcccctcctaaaccctcaatccaaaca 185  Q
    ||||||||| ||||| ||  ||| |||||| | | ||| |||| | || ||||| || |||||||||||||||||||||||||    
T  8427027 aaaaacatgttatatcgtctgtactttaaaaatgaaaagtaaactctcccctccctttccctcctaaaccctcaatccaaaca 8427109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 185
Target Start/End: Original strand, 19566878 - 19567054
Alignment:
Q  5 ttttaaattacggatactataaaatgtctttt-agaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttattttgga 103  Q
    ||||||||||| || ||||| |||||| |||| | ||||||| |||||||  |||||||||  |  ||||| ||||||||||||||| ||||||||| ||    
T  19566878 ttttaaattacagacactatgaaatgtttttttaaaaagttagcatattaaaatgataaacggtcgtataatacttcaatcacacttaatttattttaga 19566977  T
Q  104 aaaacatgctatatagtacgtagtttaaacaagcaaactaaattttctcctccattcccctcctaaaccctcaatccaaaca 185  Q
    |||||||| |||||||| |||| |||||| ||  ||| ||||      |||||  ||| |||||||||||||||||||||||    
T  19566978 aaaacatgttatatagtccgtaatttaaaaaatgaaattaaa-----ccctcccctcctctcctaaaccctcaatccaaaca 19567054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 36046258 - 36046439
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttatttt 100  Q
    |||||||||||||||||| |||| ||||||| ||||| ||||||||||||||| |||| ||||  || | |||| ||||||||  ||||  |||||||||    
T  36046258 tcatttttaaattacggacactagaaaatgttttttaaaaagttaacatattaacatgttaaatgatcacataatacttcaat--cactcaatttatttt 36046355  T
Q  101 ggaaaaacatgctatatagtacgtagtttaaacaagcaaactaaattttctcctccattcccctcctaaaccctcaatccaaaca 185  Q
      |||| |||| ||||| || |||| |||||| ||  ||| ||||   || ||||| |||||||| |||||||||||||||||||    
T  36046356 ataaaagcatgttatatcgtccgtaatttaaaaaacaaaagtaaa-cctcccctcccttcccctcataaaccctcaatccaaaca 36046439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 42 - 146
Target Start/End: Original strand, 6721717 - 6721821
Alignment:
Q  42 gttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttattttggaaaaacatgctatatagtacgtagtttaaacaagcaaac 141  Q
    ||||| || ||| |||||||||  || |||||| | ||||||||||||||||||||||| ||||||||||||||||| | ||| ||||||| ||| ||||    
T  6721717 gttaatatcttaacatgataaatgataatataatatttcaatcacacttgatttattttagaaaaacatgctatatattccgtggtttaaaaaagaaaac 6721816  T
Q  142 taaat 146  Q
    |||||    
T  6721817 taaat 6721821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 43 - 185
Target Start/End: Complemental strand, 2241558 - 2241417
Alignment:
Q  43 ttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttattttggaaaaacatgctatatagtacgtagtttaaacaagcaaact 142  Q
    ||||||||||| ||||||||||||| |||||| |||||||| |||||| ||||||||| ||||||| |  |||||||| |||| |||| |  |  ||| |    
T  2241558 ttaacatattaacatgataaacaatcatataatacttcaattacacttaatttattttagaaaaacgtattatatagtccgtaatttataataaaaaagt 2241459  T
Q  143 aaattttctcctccattcccctcctaaaccctcaatccaaaca 185  Q
    ||| | || ||||| |||||||||| ||||||||||| |||||    
T  2241458 aaactctcccctcccttcccctcct-aaccctcaatctaaaca 2241417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 69 - 185
Target Start/End: Complemental strand, 35736297 - 35736181
Alignment:
Q  69 atataaaacttcaatcacacttgatttattttggaaaaacatgctatatagtacgtagtttaaacaagcaaactaaattttctcctccattcccctccta 168  Q
    |||||| |||||| |||||||| ||||||||| |||||||||| ||| |||| |||  |||||| ||| ||| |||    || ||||| |||||||||||    
T  35736297 atataatacttcagtcacacttcatttattttagaaaaacatgttatctagtccgtgatttaaaaaagaaaattaacccctcccctcccttcccctccta 35736198  T
Q  169 aaccctcaatccaaaca 185  Q
    |||||||||||||||||    
T  35736197 aaccctcaatccaaaca 35736181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 40022563 - 40022441
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtctttt-agaaagttaacatattagcat--gataaacaatgatataaaacttcaatcacacttgatttat 97  Q
    ||||||||||||||| || ||||| |||||| |||| | ||||| |||||||||  ||  | |||||||| |||||| ||||||||||||||| ||||||    
T  40022563 tcatttttaaattacagacactatgaaatgtttttttaaaaagtaaacatattataatatgttaaacaatcatataatacttcaatcacacttaatttat 40022464  T
Q  98 tttggaaaaacatgctatatagt 120  Q
    |||  ||||||||| ||||||||    
T  40022463 tttacaaaaacatgttatatagt 40022441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 42316818 - 42316907
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacactt 90  Q
    ||||||||||||| |  | ||||| |||||| ||||| ||||||||| ||||| |||||||||| || |||||| |||||||||||||||    
T  42316818 tcatttttaaattgcaaacactatgaaatgttttttaaaaagttaacgtattaacatgataaacgatcatataatacttcaatcacactt 42316907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 39 - 107
Target Start/End: Original strand, 37739983 - 37740051
Alignment:
Q  39 aaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttattttggaaaaa 107  Q
    |||||||| |||||| |||||||||| || |||||| ||||||||||||||| ||||||||| ||||||    
T  37739983 aaagttaagatattaacatgataaacgatcatataatacttcaatcacacttaatttattttagaaaaa 37740051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 196
Target Start/End: Original strand, 31795826 - 31796013
Alignment:
Q  4 tttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttattttgga 103  Q
    ||||||||||||||| ||||| ||| || ||||  |||  ||| |||  | |||||||||| || |||||| ||||||||||||||| |||||||||  |    
T  31795826 tttttaaattacggacactatgaaaagtttttttaaaaaataaaataacaacatgataaacgatcatataatacttcaatcacacttaatttattttaaa 31795925  T
Q  104 aaaacatgctatatagtacgtagtttaaacaagcaaactaaattttctcctccattcccctcctaaaccctcaatccaaacaaaaccttaaag 196  Q
    |||||||| ||| || | |||  |||| | ||| ||| |||    || ||||| ||||||||||||||| |||||||||||||| ||| ||||    
T  31795926 aaaacatgttatttactccgtgatttagaaaagaaaattaa----tc-cctcccttcccctcctaaaccttcaatccaaacaaaccctaaaag 31796013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 27926743 - 27926670
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataa 74  Q
    |||||||||||||||||||||||| |||| |   ||| ||||||||||||||| |||||||||| || ||||||    
T  27926743 tcatttttaaattacggatactattaaattttggttaaaaagttaacatattaacatgataaacgatcatataa 27926670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 120
Target Start/End: Original strand, 28262500 - 28262616
Alignment:
Q  4 tttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttattttgga 103  Q
    ||||||||||| | | ||||| |||| | ||||| |||||||| ||| || |||||||||| || || ||| | ||||||||||  | ||||||||| ||    
T  28262500 tttttaaattatgaacactatgaaatattttttaaaaagttaatataataacatgataaacgatcatgtaatatttcaatcacatgtaatttattttaga 28262599  T
Q  104 aaaacatgctatatagt 120  Q
    |||||||| ||||||||    
T  28262600 aaaacatgttatatagt 28262616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 116
Target Start/End: Complemental strand, 39821856 - 39821744
Alignment:
Q  4 tttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttattttgga 103  Q
    ||||||||||||||| ||||| ||||    |||| | ||||||||||||| |||||||||  ||  ||||| |||| |||| ||||| ||||||||| ||    
T  39821856 tttttaaattacggacactatgaaataatatttaaagagttaacatattaacatgataaatgatcttataatacttaaatcgcacttaatttattttaga 39821757  T
Q  104 aaaacatgctata 116  Q
    |||||||| ||||    
T  39821756 aaaacatgttata 39821744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 152 - 185
Target Start/End: Original strand, 31061565 - 31061598
Alignment:
Q  152 cctccattcccctcctaaaccctcaatccaaaca 185  Q
    ||||||||||||||||||||||||||||||||||    
T  31061565 cctccattcccctcctaaaccctcaatccaaaca 31061598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 110
Target Start/End: Original strand, 29525817 - 29525896
Alignment:
Q  33 ttttagaaagttaacatattagcatgataaaca--atgatataaaacttcaatcacacttgatttattttggaaaaacat 110  Q
    |||| |||||||||||||||| ||||||||| |  || |||||| |||||||||||| || |||||||||  ||||||||    
T  29525817 ttttggaaagttaacatattaacatgataaaaagtattatataatacttcaatcacatttaatttattttaaaaaaacat 29525896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 1583267 - 1583222
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttagaaagttaa 46  Q
    |||||||||||||||||| ||||| |||||| ||||| ||||||||    
T  1583267 tcatttttaaattacggacactatgaaatgttttttaaaaagttaa 1583222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 152 - 185
Target Start/End: Complemental strand, 17379885 - 17379852
Alignment:
Q  152 cctccattcccctcctaaaccctcaatccaaaca 185  Q
    ||||| ||||||||||||||||||||||||||||    
T  17379885 cctcccttcccctcctaaaccctcaatccaaaca 17379852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 55 - 100
Target Start/End: Complemental strand, 18811464 - 18811419
Alignment:
Q  55 catgataaacaatgatataaaacttcaatcacacttgatttatttt 100  Q
    ||||||||||||| |||||| | ||||||||||||| |||||||||    
T  18811464 catgataaacaatcatataatatttcaatcacacttaatttatttt 18811419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 194
Target Start/End: Original strand, 17380052 - 17380088
Alignment:
Q  158 ttcccctcctaaaccctcaatccaaacaaaaccttaa 194  Q
    |||||||||||||||||||||||||||| | ||||||    
T  17380052 ttcccctcctaaaccctcaatccaaacacacccttaa 17380088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 185
Target Start/End: Original strand, 42296505 - 42296541
Alignment:
Q  149 tctcctccattcccctcctaaaccctcaatccaaaca 185  Q
    |||||||| |||||||||||| |||||||||||||||    
T  42296505 tctcctcccttcccctcctaatccctcaatccaaaca 42296541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 89; Significance: 5e-43; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 193
Target Start/End: Complemental strand, 1281333 - 1281141
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttatttt 100  Q
    |||||||||||||||||| ||||| |||| | ||||| ||||||||||||||| ||| |||||| || |||||| ||||||| |||||||||||||| ||    
T  1281333 tcatttttaaattacggacactatgaaatattttttaaaaagttaacatattaacataataaacgataatataatacttcaaccacacttgatttatctt 1281234  T
Q  101 ggaaaaacatgctatatagtacgtagtttaaacaagcaaactaaattttctcctccattcccctcctaaaccctcaatccaaacaaaacctta 193  Q
     |||||||||| ||||| || |||| |||||| ||| ||| ||||   |||| ||| |||||||||||||||||||||||||||||| |||||    
T  1281233 agaaaaacatgttatatcgtccgtaatttaaaaaagaaaagtaaaccctctcatcccttcccctcctaaaccctcaatccaaacaaatcctta 1281141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 30479771 - 30479955
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttatttt 100  Q
    ||||||||||||||| || ||||| |||||||||||| |||||||||||||||   |||||||  || |||||| |||||||||||||||||||||||||    
T  30479771 tcatttttaaattacagacactatgaaatgtcttttaaaaagttaacatattaaggtgataaatgataatataatacttcaatcacacttgatttatttt 30479870  T
Q  101 ggaaaaacatgctatatagtacgtagtttaaacaagcaaactaaattttctcctccattcccctcctaaaccctcaatccaaaca 185  Q
     ||||||||||  |||||||  |||||||||| ||| ||||||||   ||  ||||||||| ||| |||||||||||||||||||    
T  30479871 agaaaaacatgacatatagtctgtagtttaaaaaagaaaactaaaccctccgctccattcctctcataaaccctcaatccaaaca 30479955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 9718533 - 9718717
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttatttt 100  Q
    |||||||||||||||||| ||||| |||||  ||||| ||||||| ||||||| ||||||||||||| |||||| |||||||||||| || ||  |||||    
T  9718533 tcatttttaaattacggacactatgaaatggtttttaaaaagttagcatattaacatgataaacaatcatataatacttcaatcacaattaatgaatttt 9718632  T
Q  101 ggaaaaacatgctatatagtacgtagtttaaacaagcaaactaaattttctcctccattcccctcctaaaccctcaatccaaaca 185  Q
     |||||| ||| |||||||| | || |||||| ||| ||| |||| |||| ||||| ||| ||||||||||||||||||||||||    
T  9718633 agaaaaatatgttatatagttcataatttaaaaaagaaaagtaaactttcccctcccttctcctcctaaaccctcaatccaaaca 9718717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 31543126 - 31543310
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttatttt 100  Q
    |||||||||||||||||| ||||| |||||| ||| | ||||||||||||||| ||| ||||||  | |||||| ||||||||||||||| |||||||||    
T  31543126 tcatttttaaattacggaaactatgaaatgtttttaaaaaagttaacatattaacatcataaacggtcatataatacttcaatcacacttaatttatttt 31543225  T
Q  101 ggaaaaacatgctatatagtacgtagtttaaacaagcaaactaaattttctcctccattcccctcctaaaccctcaatccaaaca 185  Q
     |||||||||| ||||| || | || |||||| ||| ||| ||||   || ||||| |||||||||||||||||||||| |||||    
T  31543226 agaaaaacatgttatatggtccataatttaaaaaagaaaagtaaaccctcccctcccttcccctcctaaaccctcaatcgaaaca 31543310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 4 - 185
Target Start/End: Complemental strand, 28083929 - 28083748
Alignment:
Q  4 tttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttattttgga 103  Q
    ||||||||||||||||||||| | |||| ||||| | ||||||||| | | ||||||||||||| |||||| ||| ||||||||||| ||||||||| ||    
T  28083929 tttttaaattacggatactatgatatgttttttaaagagttaacatgtcaacatgataaacaatcatataatactccaatcacacttaatttattttaga 28083830  T
Q  104 aaaacatgctatatagtacgtagtttaaacaagcaaactaaattttctcctccattcccctcctaaaccctcaatccaaaca 185  Q
     ||||||| ||||| ||  ||| |||||| ||| |||  ||| | |||||||| ||||||||||||||||||||||| ||||    
T  28083829 gaaacatgttatattgtctgtaatttaaaaaagaaaaacaaaatctctcctcccttcccctcctaaaccctcaatccgaaca 28083748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 11575460 - 11575644
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttatttt 100  Q
    ||||| |||||||| ||||||||| |||||| ||||| ||||||||||||||| |||||||||| || |||||| |||| |||||||||| |||||||||    
T  11575460 tcattcttaaattaaggatactatgaaatgttttttaaaaagttaacatattaacatgataaacgatcatataatactttaatcacacttaatttatttt 11575559  T
Q  101 ggaaaaacatgctatatagtacgtagtttaaacaagcaaactaaattttctcctccattcccctcctaaaccctcaatccaaaca 185  Q
     |||||||||| |||||| |  ||| |||||| | | ||| ||||   || ||||| ||| | ||||||||||| ||||||||||    
T  11575560 agaaaaacatgttatataatttgtaatttaaaaatgaaaagtaaaccctcccctcccttctcatcctaaaccctgaatccaaaca 11575644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 7979330 - 7979146
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttatttt 100  Q
    |||||||||||||||||| ||  | |||||| | ||| ||  ||||| ||||| ||||||||| ||| |||||| ||||||||  |||||||||||||||    
T  7979330 tcatttttaaattacggacaccgtgaaatgtttattaaaagtttaacttattaacatgataaataatcatataatacttcaattgcacttgatttatttt 7979231  T
Q  101 ggaaaaacatgctatatagtacgtagtttaaacaagcaaactaaattttctcctccattcccctcctaaaccctcaatccaaaca 185  Q
     |||||||||| |||||||| |||| |||||| ||| ||| |||| | ||  |||| |||| || ||||||||||||||||||||    
T  7979230 agaaaaacatgttatatagtccgtaatttaaaaaagaaaagtaaactctcctctcccttcctcttctaaaccctcaatccaaaca 7979146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 16653139 - 16652995
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttatttt 100  Q
    |||||||||||||||||| | ||| |||||| ||| | ||||||||||||||| ||  |||||| || |||||| |||||||||||||||||||||||||    
T  16653139 tcatttttaaattacggacattatgaaatgtttttgaaaaagttaacatattaacaaaataaacgatcatataatacttcaatcacacttgatttatttt 16653040  T
Q  101 ggaaaaacatgctatatagtacgtagtttaaacaagcaaactaaa 145  Q
      ||||||||| |||||||| |||| |||||| ||| ||| ||||    
T  16653039 ataaaaacatgttatatagtccgtaatttaaaaaagaaaagtaaa 16652995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 2 - 185
Target Start/End: Original strand, 7503009 - 7503192
Alignment:
Q  2 catttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttattttg 101  Q
    ||||||||||||||  | ||||| |||||| || || ||||||||||||||| ||||||||||||| |||||| |||| |||||||||| |||||||||     
T  7503009 catttttaaattaccaaaactatgaaatgttttataaaaagttaacatattaacatgataaacaatcatataatactttaatcacacttaatttatttta 7503108  T
Q  102 gaaaaacatgctatatagtacgtagtttaaacaagcaaactaaattttctcctccattcccctcctaaaccctcaatccaaaca 185  Q
    |||||||||| |||||| | | || |||||| | | ||| ||||   || |||||  |||||||| ||| ||||||||||||||    
T  7503109 gaaaaacatgttatataatccataatttaaaaacgaaaagtaaaccctcccctcccctcccctcccaaagcctcaatccaaaca 7503192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 3 - 185
Target Start/End: Complemental strand, 2248640 - 2248458
Alignment:
Q  3 atttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttattttgg 102  Q
    |||||||||||||||| ||||| |||| | ||||  ||||||||| ||||| |||  |||||  | |||||| | | ||||||||||||||||||||| |    
T  2248640 atttttaaattacggacactatgaaatatttttttaaaagttaacttattaacatcgtaaacggtcatataatattccaatcacacttgatttattttag 2248541  T
Q  103 aaaaacatgctatatagtacgtagtttaaacaagcaaactaaattttctcctccattcccctcctaaaccctcaatccaaaca 185  Q
    ||||||||| ||||||   |||| |||||| ||| ||| | || | || ||||| |||||||||||||| |||||||||||||    
T  2248540 aaaaacatgttatataaaccgtaatttaaaaaaggaaattgaactctcccctcccttcccctcctaaactctcaatccaaaca 2248458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 1026903 - 1027086
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttatttt 100  Q
    ||||||||||||| |||| ||||| |||| | || |  ||||||||||||||| |||||||||| || |||||| |||||||||| |||| |||||||||    
T  1026903 tcatttttaaattgcggacactatgaaatattttatcaaaagttaacatattaacatgataaacgatcatataatacttcaatcatacttaatttatttt 1027002  T
Q  101 ggaaaaacatgctatatagtacgtagtttaaacaagcaaactaaattttctcctccattcccctcctaaaccctcaatccaaaca 185  Q
     |||||||||  |||||||| |||| |||||| ||| ||| | ||   |  ||||| ||||| ||||||||||| ||||||||||    
T  1027003 agaaaaacat-ttatatagtccgtaatttaaaaaagaaaagtgaacccttccctcccttcccttcctaaacccttaatccaaaca 1027086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 6315252 - 6315128
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttatttt 100  Q
    ||||||||||| |||||| ||||| |||||| ||| | ||| ||||||||||| | |||||||| ||  ||||| ||||||||||||||| |||||||||    
T  6315252 tcatttttaaaatacggacactatgaaatgtttttaaaaaaattaacatattaacttgataaacgatcgtataatacttcaatcacacttaatttatttt 6315153  T
Q  101 ggaaaaacatgctatatagtacgta 125  Q
     |||||||||| |||||||| ||||    
T  6315152 agaaaaacatgttatatagtccgta 6315128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 3 - 132
Target Start/End: Original strand, 29358396 - 29358524
Alignment:
Q  3 atttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttattttgg 102  Q
    |||||||||||||||| |||||||||| | ||||| ||| ||||||||||| ||| |||||| ||  ||||| ||||||||||||||| ||||||| | |    
T  29358396 atttttaaattacggacactataaaatattttttaaaaa-ttaacatattaacattataaacgatcctataatacttcaatcacacttaatttattctag 29358494  T
Q  103 aaaaacatgctatatagtacgtagtttaaa 132  Q
    ||||| ||| |||||| | |||||||||||    
T  29358495 aaaaatatgttatataatccgtagtttaaa 29358524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 11785716 - 11785572
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttatttt 100  Q
    |||||||||||||||||| | ||| |||| | ||||| ||||||| ||||||| ||||||||||||  |||||| ||||||||| || || || ||||||    
T  11785716 tcatttttaaattacggacattatgaaatattttttaaaaagttagcatattaacatgataaacaaacatataatacttcaatcgcaattaatgtatttt 11785617  T
Q  101 ggaaaaacatgctatatagtacgtagtttaaacaagcaaactaaa 145  Q
     |||||||||| |||||||| | || |||||| ||| ||| ||||    
T  11785616 agaaaaacatgttatatagttcataatttaaaaaagaaaagtaaa 11785572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 41 - 185
Target Start/End: Original strand, 40990278 - 40990421
Alignment:
Q  41 agttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttattttggaaaaacatgctatatagtacgtagtttaaacaagcaaa 140  Q
    ||||||||||||| |||||||| | || |||||| |||||||||| |||| |||||||||  | ||||||| |||||||| |||| |||||| ||| |||    
T  40990278 agttaacatattaacatgataagcgatcatataatacttcaatcagacttaatttattttaaagaaacatgttatatagtccgtaatttaaaaaagaaaa 40990377  T
Q  141 ctaaattttctcctccattcccctcctaaaccctcaatccaaaca 185  Q
      ||| | |||||||| |||| ||||| |||||||||||||||||    
T  40990378 acaaactctctcctcccttcctctcct-aaccctcaatccaaaca 40990421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 5 - 116
Target Start/End: Complemental strand, 30664547 - 30664436
Alignment:
Q  5 ttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttattttggaa 104  Q
    |||||||||||||| | || ||||| | ||||| |||||||||||||||  |||||||||  | |||||| ||||||||||||||| ||||||||| |||    
T  30664547 ttttaaattacggacattacaaaatattttttaaaaagttaacatattaatatgataaacggttatataatacttcaatcacacttaatttatttttgaa 30664448  T
Q  105 aaacatgctata 116  Q
    ||||||| ||||    
T  30664447 aaacatgttata 30664436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 31738613 - 31738494
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttatttt 100  Q
    |||||||||||||||||| |||||||||| | ||||  | ||||||||||||| |||||||||  || |||||| |||||||| |||||| ||||||| |    
T  31738613 tcatttttaaattacggacactataaaatattttttgaagagttaacatattaacatgataaatgatcatataatacttcaattacacttaatttattct 31738514  T
Q  101 ggaaaaacatgctatatagt 120  Q
     || ||||||| ||||||||    
T  31738513 agagaaacatgttatatagt 31738494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 33 - 185
Target Start/End: Complemental strand, 33922678 - 33922531
Alignment:
Q  33 ttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttattttggaaaaacatgctatatagtacgtagtttaaa 132  Q
    ||||| ||||||||||||||| ||||||||||||| |||| | |||||||||| |||  |||||||||  ||||| ||| |||||||| || | ||||||    
T  33922678 ttttaaaaagttaacatattatcatgataaacaatcatatcatacttcaatcatactaaatttattttaaaaaaatatgttatatagtccggaatttaaa 33922579  T
Q  133 caagcaaactaaattttctcctccattcccctcctaaaccctcaatccaaaca 185  Q
     ||| ||| |||| |     |||| ||||| ||||||||||||||||||||||    
T  33922578 aaagaaaagtaaact-----ctcccttcccttcctaaaccctcaatccaaaca 33922531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 9 - 145
Target Start/End: Complemental strand, 37032561 - 37032425
Alignment:
Q  9 aaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttattttggaaaaac 108  Q
    |||||||||| ||||  || ||| ||||| |||||||||||||||  ||||||||| || |||||| |||| |||||||||| |||||||||  ||||||    
T  37032561 aaattacggacactaggaagtgttttttaaaaagttaacatattaagatgataaactatcatataatactttaatcacacttaatttattttaaaaaaac 37032462  T
Q  109 atgctatatagtacgtagtttaaacaagcaaactaaa 145  Q
    ||| ||||||||  ||| |||||| ||| ||| ||||    
T  37032461 atgttatatagtctgtaatttaaaaaagaaaaataaa 37032425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 185
Target Start/End: Complemental strand, 11033604 - 11033425
Alignment:
Q  5 ttttaaattacggatactataaaatgtctttt-agaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttattttgga 103  Q
    |||||||||| | ||| ||| |||||| |||| | ||| ||||||||||| |||||||||| || ||||||   ||||||||||| | ||||||||| ||    
T  11033604 ttttaaattatgaatattatgaaatgtttttttaaaaaattaacatattaacatgataaacgatcatataattattcaatcacacataatttattttaga 11033505  T
Q  104 aaaacatgctatatagtacgtagtttaaacaagcaaactaaattttctcctccattcccctcctaaaccctcaatccaaaca 185  Q
    |||||||| |||||||| |||  |||||| ||| ||| ||||    | ||||| |||| || ||||||||||||||||||||    
T  11033504 aaaacatgatatatagtccgttatttaaaaaagaaaagtaaa--cccccctcccttcctcttctaaaccctcaatccaaaca 11033425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 55 - 132
Target Start/End: Original strand, 42650444 - 42650521
Alignment:
Q  55 catgataaacaatgatataaaacttcaatcacacttgatttattttggaaaaacatgctatatagtacgtagtttaaa 132  Q
    ||||||||||||| |||||| ||||||||||||||| ||||||||| |||||||||| |||||| | |||| ||||||    
T  42650444 catgataaacaatcatataatacttcaatcacacttaatttattttagaaaaacatgttatatattccgtaatttaaa 42650521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 110
Target Start/End: Original strand, 4247574 - 4247680
Alignment:
Q  3 atttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttattttgg 102  Q
    |||||||||||||||  ||| |||||| | |||||  ||||||||||||||||||||||||| || |||||| |||| ||||| |||| |||||||||      
T  4247574 atttttaaattacggc-actttaaaatattttttaagaagttaacatattagcatgataaacgatcatataatacttaaatcatacttaatttattttaa 4247672  T
Q  103 aaaaacat 110  Q
    ||||||||    
T  4247673 aaaaacat 4247680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 37923132 - 37923251
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttatttt 100  Q
    |||||||||||||| | | ||||| |||||| ||||| | |||||| |||||| |||||||||  || |||||| | || |||| ||||| |||||||||    
T  37923132 tcatttttaaattatgaacactatgaaatgttttttaaagagttaaaatattaacatgataaatgatcatataatattttaatcgcacttaatttatttt 37923231  T
Q  101 ggaaaaacatgctatatagt 120  Q
     |||||||||| ||||||||    
T  37923232 agaaaaacatgttatatagt 37923251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 60 - 185
Target Start/End: Complemental strand, 10028241 - 10028116
Alignment:
Q  60 taaacaatgatataaaacttcaatcacacttgatttattttggaaaaacatgctatatagtacgtagtttaaacaagcaaactaaattttctcctccatt 159  Q
    ||||| || |||||| ||||||| ||||||| |||||||||  ||||| ||| ||||| || |||| |||||| ||| ||| |||| | || |||||  |    
T  10028241 taaacgatcatataagacttcaaccacacttaatttattttaaaaaaatatgttatatggtccgtaatttaaaaaagaaaagtaaaatctcacctcctat 10028142  T
Q  160 cccctcctaaaccctcaatccaaaca 185  Q
    |||||||||||||||| |||||||||    
T  10028141 cccctcctaaaccctcgatccaaaca 10028116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 182
Target Start/End: Complemental strand, 13405170 - 13404985
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttagaaagt----taacatattagcatgataaacaatgatataaaacttcaatcacacttgattta 96  Q
    |||||||||||||||||| | || ||||| | ||||  |||||    |||| ||||| |||||||||| || |||||| | |||||| | |  | |||||    
T  13405170 tcatttttaaattacggacattaaaaaatatttttttaaaagtgaattaacgtattaacatgataaacgatcatataataattcaattatatataattta 13405071  T
Q  97 ttttggaaaaacatgctatatagtacgtagtttaaacaagcaaactaaattttctcctccattcccctcctaaaccctcaatccaa 182  Q
    |||| |||||||||| ||||||||  ||  |||||| ||| ||| ||| || || | ||| |||||||||||||||||||||||||    
T  13405070 ttttagaaaaacatgttatatagtctgttatttaaaaaagaaaagtaatttctcccatcccttcccctcctaaaccctcaatccaa 13404985  T

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Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 55 - 119
Target Start/End: Original strand, 41103614 - 41103678
Alignment:
Q  55 catgataaacaatgatataaaacttcaatcacacttgatttattttggaaaaacatgctatatag 119  Q
    |||||||||| || |||||| ||||||||||||||| ||||||||| |||||||||| |||||||    
T  41103614 catgataaacgatcatataatacttcaatcacacttaatttattttagaaaaacatgttatatag 41103678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 34634331 - 34634260
Alignment:
Q  3 atttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataa 74  Q
    |||||||||||||||| ||||| |||| ||||||| ||||||||||||||| |||  |||||||| ||||||    
T  34634331 atttttaaattacggacactatgaaatatcttttaaaaagttaacatattaacattgtaaacaataatataa 34634260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 120
Target Start/End: Complemental strand, 36308995 - 36308913
Alignment:
Q  39 aaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttatttt-ggaaaaacatgctatatagt 120  Q
    ||||| ||||||||| ||||||||||||| |||||| |||||||||||||||  ||||||||   ||||||||| ||||||||    
T  36308995 aaagtaaacatattaacatgataaacaatcatataatacttcaatcacacttagtttattttataaaaaacatgttatatagt 36308913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 109
Target Start/End: Complemental strand, 34633859 - 34633819
Alignment:
Q  69 atataaaacttcaatcacacttgatttattttggaaaaaca 109  Q
    |||||| ||||||||||||||||||||||||| ||||||||    
T  34633859 atataatacttcaatcacacttgatttattttagaaaaaca 34633819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 90
Target Start/End: Original strand, 29691014 - 29691065
Alignment:
Q  39 aaagttaacatattagcatgataaacaatgatataaaacttcaatcacactt 90  Q
    ||||||||||||||| |||||||||| || |||| | |||||||||||||||    
T  29691014 aaagttaacatattaacatgataaacgatcatatgatacttcaatcacactt 29691065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 24243103 - 24243199
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttattt 99  Q
    ||||||| |||||||| | |||||||||||||||||| ||| | || ||| || |||||||||  || |||||| ||||||||||||||| ||| ||||    
T  24243103 tcattttgaaattacg-acactataaaatgtcttttaaaaattgaa-ataataacatgataaatgatcatataatacttcaatcacacttaattaattt 24243199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 152 - 185
Target Start/End: Original strand, 7394666 - 7394699
Alignment:
Q  152 cctccattcccctcctaaaccctcaatccaaaca 185  Q
    ||||| ||||||||||||||||||||||||||||    
T  7394666 cctcccttcccctcctaaaccctcaatccaaaca 7394699  T

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Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 152 - 185
Target Start/End: Original strand, 12022348 - 12022381
Alignment:
Q  152 cctccattcccctcctaaaccctcaatccaaaca 185  Q
    ||||| ||||||||||||||||||||||||||||    
T  12022348 cctcctttcccctcctaaaccctcaatccaaaca 12022381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 185
Target Start/End: Complemental strand, 43732717 - 43732685
Alignment:
Q  153 ctccattcccctcctaaaccctcaatccaaaca 185  Q
    |||| ||||||||||||||||||||||||||||    
T  43732717 ctcccttcccctcctaaaccctcaatccaaaca 43732685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 89; Significance: 5e-43; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 45742080 - 45741896
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttatttt 100  Q
    |||||||||||||||||| ||||| |||||| ||||| ||||||||||||||| |||||||||| || |||||| |||||||||||| || |||||||||    
T  45742080 tcatttttaaattacggacactatgaaatgttttttaaaaagttaacatattaacatgataaacgatcatataatacttcaatcacatttaatttatttt 45741981  T
Q  101 ggaaaaacatgctatatagtacgtagtttaaacaagcaaactaaattttctcctccattcccctcctaaaccctcaatccaaaca 185  Q
     |||||||| | |||||||| |||| |||||| ||  ||| |||||  || | | ||||||||||||||||||||||||||||||    
T  45741980 agaaaaacaagttatatagtccgtaatttaaaaaacaaaagtaaatcctcacattcattcccctcctaaaccctcaatccaaaca 45741896  T

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Target: chr4; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 31348375 - 31348559
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttatttt 100  Q
    |||||||||||||||||| ||||| |||||| ||||| |||| |||||||||| ||||||||||||| |||||| | ||||||||||| | |||||||||    
T  31348375 tcatttttaaattacggacactatgaaatgttttttaaaaagctaacatattaacatgataaacaatcatataataattcaatcacacataatttatttt 31348474  T
Q  101 ggaaaaacatgctatatagtacgtagtttaaacaagcaaactaaattttctcctccattcccctcctaaaccctcaatccaaaca 185  Q
     |||||||||| |||||||| |||  |||||| ||| ||| ||||   || ||||| |||||||||||||| |||||||||||||    
T  31348475 agaaaaacatgttatatagtccgttatttaaaaaagaaaagtaaaccctcccctcccttcccctcctaaactctcaatccaaaca 31348559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 194
Target Start/End: Complemental strand, 54935259 - 54935064
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaa-acttcaatcacacttgatttattt 99  Q
    |||||||||||||||||| ||||| |||||| ||||| ||||||| |||||||  ||||||||| || ||||||| ||||||||||||||| ||||||||    
T  54935259 tcatttttaaattacggacactatgaaatgtattttaaaaagttatcatattaatatgataaacgatcatataaatacttcaatcacacttaatttattt 54935160  T
Q  100 tggaaaaacatgctatatagtacgtagtttaaacaagcaaactaaa-ttttctcctccattcccctcctaaaccctcaatccaaacaaaaccttaa 194  Q
    | |||||||||| |||||||| |||| |||||| ||| ||| ||||   | | ||||| |||||||||||||||||||||||||||| | ||||||    
T  54935159 tagaaaaacatgttatatagttcgtaatttaaaaaagaaaagtaaaccctccccctcccttcccctcctaaaccctcaatccaaacacacccttaa 54935064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 49735522 - 49735695
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttatttt 100  Q
    |||||||||||||||||| |  || |||||||||||| ||||||||| ||||| |||||||||| || |||||| | ||| |||||||||||||||||||    
T  49735522 tcatttttaaattacggacaacatgaaatgtcttttaaaaagttaacctattaacatgataaacgataatataatatttctatcacacttgatttatttt 49735621  T
Q  101 ggaaaaacatgctatatagtacgtagtttaaacaagcaaactaaattttctcctccattcccctcctaaaccctc 175  Q
     |||||||||| |||||||| ||||||||||| ||| ||||||||   || ||||| ||||||||||||||||||    
T  49735622 agaaaaacatgttatatagtccgtagtttaaaaaagaaaactaaa-cctcccctcccttcccctcctaaaccctc 49735695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 27735935 - 27735751
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttatttt 100  Q
    |||||||||||||||||| |||||||||||| ||||| | ||||| ||||||| |||||||||  || |||||| ||||||||||||||| |||||||||    
T  27735935 tcatttttaaattacggacactataaaatgttttttaaagagttagcatattaacatgataaatgatcatataatacttcaatcacacttaatttatttt 27735836  T
Q  101 ggaaaaacatgctatatagtacgtagtttaaacaagcaaactaaattttctcctccattcccctcctaaaccctcaatccaaaca 185  Q
      ||||||||| |||||||| |||| |||||| | | ||| ||||   |||| ||| |||||||||||||||||| |||||||||    
T  27735835 aaaaaaacatgttatatagtccgtaatttaaaaatgaaaattaaaccctctcttcccttcccctcctaaaccctcgatccaaaca 27735751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 3 - 195
Target Start/End: Complemental strand, 54320622 - 54320431
Alignment:
Q  3 atttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttattttgg 102  Q
    |||||||||||||||| ||||| ||| || ||||| ||||||| ||||||| ||||||||||||| |||||| ||| ||||||||||| ||||||||| |    
T  54320622 atttttaaattacggacactatgaaacgttttttaaaaagttagcatattaacatgataaacaatcatataatactccaatcacacttaatttattttag 54320523  T
Q  103 aaaaacatgctatatagtacgtagtttaaacaagcaaactaaattttctcctccattcccctcctaaaccctcaatccaaacaaaaccttaaa 195  Q
    ||||||||| ||||||||  ||| |||||| ||| |||  |||   || ||||| || ||||||||||||||||||||||||| | |||||||    
T  54320522 aaaaacatgatatatagtcggtaatttaaaaaagaaaatcaaaccctc-cctccctttccctcctaaaccctcaatccaaacacacccttaaa 54320431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 10 - 185
Target Start/End: Complemental strand, 26167118 - 26166943
Alignment:
Q  10 aattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttattttggaaaaaca 109  Q
    ||||||||| ||| | |||||| ||||  | ||||||||||||| |||||||||| || |||||| ||||||||||||||| ||||||||| || |||||    
T  26167118 aattacggacactttgaaatgtttttttaagagttaacatattaacatgataaacgatcatataatacttcaatcacacttaatttattttagagaaaca 26167019  T
Q  110 tgctatatagtacgtagtttaaacaagcaaactaaattttctcctccattcccctcctaaaccctcaatccaaaca 185  Q
    || ||||||||  ||| |||||| ||| |||  ||| | || ||||||||||||||||||||||||||||||||||    
T  26167018 tgttatatagtctgtaatttaaaaaagaaaaacaaactctcccctccattcccctcctaaaccctcaatccaaaca 26166943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 39 - 194
Target Start/End: Original strand, 1968451 - 1968606
Alignment:
Q  39 aaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttattttggaaaaacatgctatatagtacgtagtttaaacaagca 138  Q
    ||||||||||||||| |||||||||| || |||||| ||||||||||||| ||||||||||| |||||||||  |||||||| |||| |||||| | | |    
T  1968451 aaagttaacatattaacatgataaacgatcatataatacttcaatcacacctgatttattttagaaaaacatattatatagtccgtaatttaaaaatgaa 1968550  T
Q  139 aactaaattttctcctccattcccctcctaaaccctcaatccaaacaaaaccttaa 194  Q
    || |||| | |  ||||| |||||||||||||||||||||||||||| | ||||||    
T  1968551 aattaaactcttccctcccttcccctcctaaaccctcaatccaaacacacccttaa 1968606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 5730884 - 5731069
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttatttt 100  Q
    ||||||||||||||||||  ||||||||| | ||||  | ||||||||||||| |||||||||  || |||||| |||||||| |||||| |||||||||    
T  5730884 tcatttttaaattacggaccctataaaatattttttgaagagttaacatattaacatgataaatgatcatataatacttcaattacacttaatttatttt 5730983  T
Q  101 ggaaaaacatgctatatagtacgtagtttaaacaa-gcaaactaaattttctcctccattcccctcctaaaccctcaatccaaaca 185  Q
     || ||||||| |||||||| |||| |||||| || | |||  ||| | || ||||| ||||||||||||||||||||| ||||||    
T  5730984 agagaaacatgttatatagtccgtaatttaaaaaaagtaaaacaaactctcccctcccttcccctcctaaaccctcaattcaaaca 5731069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 36151765 - 36151647
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttatttt 100  Q
    |||||||||||||| | | |||| ||||||  ||||| ||||||||||||||| |||||||||| || |||||| ||||||||||||||| |||||||||    
T  36151765 tcatttttaaattatgaacactagaaaatgattttta-aaagttaacatattaacatgataaacgatcatataatacttcaatcacacttaatttatttt 36151667  T
Q  101 ggaaaaacatgctatatagt 120  Q
     |||||||||| ||||||||    
T  36151666 agaaaaacatgttatatagt 36151647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 4 - 182
Target Start/End: Complemental strand, 16400987 - 16400809
Alignment:
Q  4 tttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttattttgga 103  Q
    ||||||||||| ||| ||||| ||||   ||||| ||||||||||||||| |||||||||| || |||||| |||||||||| | || ||||||||| ||    
T  16400987 tttttaaattagggacactatgaaatagtttttaaaaagttaacatattaacatgataaacgatcatataatacttcaatcataattaatttattttaga 16400888  T
Q  104 aaaacatgctatatagtacgtagtttaaacaagcaaactaaattttctcctccattcccctcctaaaccctcaatccaa 182  Q
    |||||||| | ||||||  ||||| |||| ||  ||| | |||  || ||||| ||| |||||||||||||||||||||    
T  16400887 aaaacatgttgtatagtttgtagtataaaaaataaaagtgaatcctcccctcccttctcctcctaaaccctcaatccaa 16400809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 33 - 185
Target Start/End: Original strand, 46007787 - 46007939
Alignment:
Q  33 ttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttattttggaaaaacatgctatatagtacgtagtttaaa 132  Q
    ||||| ||||||||||||||| |||||||||  || |||||| ||||||||| ||||| |||||||||  ||||||| | ||||||||  | | ||||||    
T  46007787 ttttaaaaagttaacatattaacatgataaatgatcatataatacttcaatctcacttaatttattttacaaaaacaagttatatagtctgcaatttaaa 46007886  T
Q  133 caagcaaactaaattttctcctccattcccctcctaaaccctcaatccaaaca 185  Q
     ||| ||| ||||   || ||||| ||||||||||||||||||||||||||||    
T  46007887 aaagaaaagtaaaccctcccctcccttcccctcctaaaccctcaatccaaaca 46007939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 195
Target Start/End: Complemental strand, 29798475 - 29798284
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttagaaagttaacatattag-catgataaacaatgatataaaacttcaatcacacttgatttattt 99  Q
    |||||||||||||||||| ||||| |||||| ||||| ||| ||||||| |||  ||| |||||| || |||||| |||||||||||||||||||||       
T  29798475 tcatttttaaattacggacactatgaaatgttttttaaaaaattaacatgttaaacataataaacgatcatataatacttcaatcacacttgatttaa-- 29798378  T
Q  100 tggaaaaacatgctatatagtacgtagtttaaacaagcaaactaaattttctcctccattcccctcctaaaccctcaatccaaacaaaaccttaaa 195  Q
      |||||||||| ||||||||  ||| |||||| ||  ||| |||| | ||  |||  ||||||||||||||| |||||||||||| | |||||||    
T  29798377 --gaaaaacatgttatatagtctgtaatttaaaaaataaaagtaaactatcctctctcttcccctcctaaaccatcaatccaaacacacccttaaa 29798284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 39 - 132
Target Start/End: Complemental strand, 35248838 - 35248745
Alignment:
Q  39 aaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttattttggaaaaacatgctatatagtacgtagtttaaa 132  Q
    ||||||||| ||||| ||||||||| ||| |||||| ||||||||||||||| ||||||||| |||||||||| |||||||| |||| ||||||    
T  35248838 aaagttaacgtattaacatgataaataatcatataatacttcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaa 35248745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 2247857 - 2248039
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttatttt 100  Q
    |||||||||||||||||| | |||||||||| | ||| ||  ||||| |||||  |||||||||||| |||||| ||||||||||||| | |||| ||||    
T  2247857 tcatttttaaattacggacattataaaatgtttattaaaatcttaacttattaatatgataaacaattatataatacttcaatcacacat-atttttttt 2247955  T
Q  101 ggaaaaacatgctatatagtacgtagtttaaacaagcaaactaaattttctcctccattcccctcctaaaccctcaatccaaaca 185  Q
     |||||||||| |||||| |  ||| |||||| ||| ||| |||| | || | ||  ||| ||||||||||||||||||||||||    
T  2247956 agaaaaacatgttatata-tctgtaatttaaaaaagaaaagtaaactctcccttcacttctcctcctaaaccctcaatccaaaca 2248039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 41174535 - 41174416
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttatttt 100  Q
    |||||||||| ||| ||| ||||| |||||  ||||| ||||||| ||||||| ||| |||||  || |||||| || ||||||||| ||||||||||||    
T  41174535 tcatttttaatttagggacactatgaaatggtttttaaaaagttagcatattaacataataaatgatcatataatacatcaatcacatttgatttatttt 41174436  T
Q  101 ggaaaaacatgctatatagt 120  Q
     |||||||||||||||||||    
T  41174435 agaaaaacatgctatatagt 41174416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 178
Target Start/End: Complemental strand, 6891547 - 6891373
Alignment:
Q  4 tttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttattttgga 103  Q
    ||||||||||| ||| ||||| || ||| ||| | ||| |||| ||| || ||| |||||| || |||||| ||||||||||||||| ||||||||| ||    
T  6891547 tttttaaattatggacactatgaattgtttttaaaaaaattaaaataataacattataaacgatcatataatacttcaatcacacttaatttattttaga 6891448  T
Q  104 aaaacatgctatatagtacgtagtttaaacaagcaaactaaattttctcctccattcccctcctaaaccctcaat 178  Q
    |||||||| |||||| |  ||| |||||| ||| ||| |||| | || ||||  ||||||| |||||||||||||    
T  6891447 aaaacatgttatataatttgtattttaaaaaagaaaaataaactatcccctctcttccccttctaaaccctcaat 6891373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 24565400 - 24565572
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttatttt 100  Q
    |||||||||||||||||||| ||  |||||  ||||| ||||||||| ||||| | ||||||||||  |||||| ||||||||||| ||    ||||| |    
T  24565400 tcatttttaaattacggatattacgaaatgctttttaaaaagttaacttattaacgtgataaacaaacatataatacttcaatcacgct--cattattat 24565497  T
Q  101 ggaaaaacatgctatatagtacgtagtttaaacaagcaaactaaattttctcctccattcccctcctaaaccctc 175  Q
     |||||||||| |||||||  |||| |||||| ||| ||  |||||| |  ||||| ||||||||||||||||||    
T  24565498 agaaaaacatgttatatagcccgtaatttaaaaaagaaatgtaaattcttccctcccttcccctcctaaaccctc 24565572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 185
Target Start/End: Original strand, 45132559 - 45132733
Alignment:
Q  4 tttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttattttgga 103  Q
    ||||||||||| | | ||||  |||||| ||||| |||||||||||||||  ||||||||| || |||||| ||||||||||||||| |||||||||       
T  45132559 tttttaaattatgtacactacgaaatgt-ttttaaaaagttaacatattaaaatgataaacgatcatataatacttcaatcacacttaatttatttt--- 45132654  T
Q  104 aaaacatgctatatagtacgtagtttaaacaagcaaactaaattttctcctccattcccctcctaaaccctcaatccaaaca 185  Q
       ||||  |||||||| |||| |||||| ||| ||| ||||   |||||||  |||||||||||||| |||||| ||||||    
T  45132655 ---acatattatatagtccgtaatttaaaaaagaaaagtaaaccatctcctctcttcccctcctaaactctcaattcaaaca 45132733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 48 - 196
Target Start/End: Complemental strand, 37711286 - 37711133
Alignment:
Q  48 atattagcatgataaacaatgatataaaacttcaatcacacttgatttattttggaaaaacatgctatatagtacgtagtttaaacaagcaaactaaatt 147  Q
    |||||| |||||||||  || |||||| ||||||||||||||| ||||||||| || ||||||| |||||||| |||| |||||| ||| |||  |||      
T  37711286 atattaacatgataaatgatcatataatacttcaatcacacttaatttattttagagaaacatgttatatagtccgtaatttaaaaaagaaaaacaaacc 37711187  T
Q  148 ttctcc-----tccattcccctcctaaaccctcaatccaaacaaaaccttaaag 196  Q
     || ||     ||| |||||||||||||||||||||||||||| | ||||||||    
T  37711186 ctcccctcccttcccttcccctcctaaaccctcaatccaaacacacccttaaag 37711133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 185
Target Start/End: Original strand, 17938164 - 17938346
Alignment:
Q  4 tttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttattt-tgg 102  Q
    ||||||||||| ||| | |||  ||||| ||||| ||| |||| ||| || |||||||||| || |||||| ||||||||||||||| ||||||||        
T  17938164 tttttaaattatggacattatggaatgttttttaaaaatttaaaataataacatgataaacgatcatataatacttcaatcacacttaatttatttaaaa 17938263  T
Q  103 aaaaacatgctatatagtacgtagtttaaacaagcaaactaaattttctcctccattcccctcctaaaccctcaatccaaaca 185  Q
    ||||| ||| ||||||||  ||| |||||| ||| ||| |||| | ||  |||| |||||||||||||  |||||||||||||    
T  17938264 aaaaatatgttatatagtttgtaatttaaaaaagaaaagtaaactctcatctcccttcccctcctaaattctcaatccaaaca 17938346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 56 - 185
Target Start/End: Complemental strand, 22921117 - 22920987
Alignment:
Q  56 atgataaacaatgatataaaacttcaatcacac-ttgatttattttggaaaaacatgctatatagtacgtagtttaaacaagcaaactaaattttctcct 154  Q
    ||||||||| || |||||| ||||||||||||| |||||||||| | |||||||||| ||| ||||  ||| |||||| ||| ||  |||||| ||  ||    
T  22921117 atgataaacgatcatataatacttcaatcacactttgatttattctagaaaaacatgttatgtagtttgtaatttaaaaaagaaacgtaaattctcctct 22921018  T
Q  155 ccattcccctcctaaaccctcaatccaaaca 185  Q
    |  || |||||||||||| ||||||||||||    
T  22921017 ctttttccctcctaaaccatcaatccaaaca 22920987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 56 - 185
Target Start/End: Original strand, 22970682 - 22970812
Alignment:
Q  56 atgataaacaatgatataaaacttcaatcacac-ttgatttattttggaaaaacatgctatatagtacgtagtttaaacaagcaaactaaattttctcct 154  Q
    ||||||||| || |||||| ||||||||||||| |||||||||| | |||||||||| ||| ||||  ||| |||||| ||| ||  |||||| ||  ||    
T  22970682 atgataaacgatcatataatacttcaatcacactttgatttattctagaaaaacatgttatgtagtttgtaatttaaaaaagaaacgtaaattctcctct 22970781  T
Q  155 ccattcccctcctaaaccctcaatccaaaca 185  Q
    |  || |||||||||||| ||||||||||||    
T  22970782 ctttttccctcctaaaccatcaatccaaaca 22970812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 185
Target Start/End: Original strand, 47433766 - 47433947
Alignment:
Q  4 tttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttattttgga 103  Q
    ||||||||||| ||| | |||  ||||| ||||| ||| |||| ||| || ||| |||||| || |||||| ||||||||||||||| |||||||||  |    
T  47433766 tttttaaattatggacattatggaatgttttttaaaaaattaaaataataacat-ataaacgatcatataatacttcaatcacacttaatttattttaaa 47433864  T
Q  104 aaaacatgcta-tatagtacgtagtttaaacaagcaaactaaattttctcctccattcccctcctaaaccctcaatccaaaca 185  Q
    |||||||| || ||||||  ||| |||||| ||| ||| ||||   ||  |||| ||||||||||||||| |||| |||||||    
T  47433865 aaaacatgttattatagtctgtaatttaaaaaagaaaagtaaaccctcctctcccttcccctcctaaaccgtcaacccaaaca 47433947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 34110992 - 34110897
Alignment:
Q  3 atttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttattt 99  Q
    |||||||||||||| ||||| | |||||| ||||| ||||||||||||||| |||||||||| || |||||| | || || |||||||  |||||||    
T  34110992 atttttaaattacg-atactgtgaaatgttttttaaaaagttaacatattaacatgataaacgatcatataatattttaagcacacttactttattt 34110897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 42 - 146
Target Start/End: Complemental strand, 44784141 - 44784037
Alignment:
Q  42 gttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttattttggaaaaacatgctatatagtacgtagtttaaacaagcaaac 141  Q
    |||||||||||| | | |||||| || |||||| ||||||||||||||| ||||| ||| ||||||| || ||||| ||| ||| |||||| ||| |||     
T  44784141 gttaacatattaaccttataaacgatcatataatacttcaatcacacttaatttactttagaaaaacctgttatatggtatgtaatttaaaaaagaaaag 44784042  T
Q  142 taaat 146  Q
    |||||    
T  44784041 taaat 44784037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 120
Target Start/End: Original strand, 2917061 - 2917136
Alignment:
Q  45 aacatattagcatgataaacaatgatataaaacttcaatcacacttgatttattttggaaaaacatgctatatagt 120  Q
    ||||||||| |||||||||| || |||||| |||||||||||| |  ||||||||| ||||| |||| ||||||||    
T  2917061 aacatattaacatgataaacgatcatataatacttcaatcacaataaatttattttagaaaatcatgttatatagt 2917136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 6938437 - 6938394
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttagaaagtt 44  Q
    |||||||||||||||||||| |||||||||| ||||| ||||||    
T  6938437 tcatttttaaattacggatattataaaatgttttttaaaaagtt 6938394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 50 - 185
Target Start/End: Complemental strand, 56135890 - 56135755
Alignment:
Q  50 attagcatgataaacaatgatataaaacttcaatcacacttgatttattttggaaaaacatgctatatagtacgtagtttaaacaagcaaactaaatttt 149  Q
    |||| |||||||||  || |||||| |||||||  |||||| |||||||||  ||||||||  || || || |||| |||||| ||  ||| | ||   |    
T  56135890 attaacatgataaatgatcatataatacttcaaaaacacttaatttattttaaaaaaacattttacattgttcgtaatttaaaaaataaaaatgaaccct 56135791  T
Q  150 ctcctccattcccctcctaaaccctcaatccaaaca 185  Q
    | ||||| ||||||||||||||||||||||||||||    
T  56135790 cccctcccttcccctcctaaaccctcaatccaaaca 56135755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 187
Target Start/End: Complemental strand, 6938359 - 6938285
Alignment:
Q  113 tatatagtacgtagtttaaacaagcaaactaaattttctcctccattcccctcctaaaccctcaatccaaacaaa 187  Q
    |||||||| |||| |||||| | | ||| |||||  |||||||| ||||||||||||| | ||||||||||||||    
T  6938359 tatatagtccgtaatttaaaaaggaaaaataaatcctctcctcccttcccctcctaaatcatcaatccaaacaaa 6938285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 187
Target Start/End: Complemental strand, 27775616 - 27775587
Alignment:
Q  158 ttcccctcctaaaccctcaatccaaacaaa 187  Q
    ||||||||||||||||||||||||||||||    
T  27775616 ttcccctcctaaaccctcaatccaaacaaa 27775587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 152 - 185
Target Start/End: Complemental strand, 49735507 - 49735474
Alignment:
Q  152 cctccattcccctcctaaaccctcaatccaaaca 185  Q
    ||||| ||||||||||||||||||||||||||||    
T  49735507 cctcccttcccctcctaaaccctcaatccaaaca 49735474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 152 - 185
Target Start/End: Original strand, 49735697 - 49735730
Alignment:
Q  152 cctccattcccctcctaaaccctcaatccaaaca 185  Q
    ||||| ||||||||||||||||||||||||||||    
T  49735697 cctcccttcccctcctaaaccctcaatccaaaca 49735730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 152 - 185
Target Start/End: Original strand, 54320639 - 54320672
Alignment:
Q  152 cctccattcccctcctaaaccctcaatccaaaca 185  Q
    ||||| ||||||||||||||||||||||||||||    
T  54320639 cctcccttcccctcctaaaccctcaatccaaaca 54320672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 196
Target Start/End: Original strand, 7977702 - 7977746
Alignment:
Q  152 cctccattcccctcctaaaccctcaatccaaacaaaaccttaaag 196  Q
    ||||| |||||||| ||||||||||||||||||| | ||||||||    
T  7977702 cctcctttcccctcataaaccctcaatccaaacacacccttaaag 7977746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 198
Target Start/End: Original strand, 14539487 - 14539527
Alignment:
Q  158 ttcccctcctaaaccctcaatccaaacaaaaccttaaagtt 198  Q
    |||||||| ||||||||||||||||||| ||||||| ||||    
T  14539487 ttcccctcttaaaccctcaatccaaacacaaccttatagtt 14539527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 89; Significance: 5e-43; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 220451 - 220635
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttatttt 100  Q
    |||||||||||||||||| | ||| |||||| ||||| ||||||||||||||| ||| |||||||||  ||||| |||||||||| ||||||||||||||    
T  220451 tcatttttaaattacggacattatgaaatgttttttaaaaagttaacatattaacataataaacaatcttataacacttcaatcatacttgatttatttt 220550  T
Q  101 ggaaaaacatgctatatagtacgtagtttaaacaagcaaactaaattttctcctccattcccctcctaaaccctcaatccaaaca 185  Q
     |||||||||| || ||||| |||| |||||| ||| ||| |||||| || ||||| ||| |||||||||||||| |||||||||    
T  220551 agaaaaacatgttacatagtccgtaatttaaaaaagaaaagtaaattctcccctcccttctcctcctaaaccctccatccaaaca 220635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 195
Target Start/End: Original strand, 41110375 - 41110569
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttatttt 100  Q
    |||||||||||||||||| ||||| |||| | || || ||||||||||||||| ||||||||||||| |||||| ||||||||||||||| |||||||||    
T  41110375 tcatttttaaattacggacactatgaaatattttataaaaagttaacatattaacatgataaacaatcatataatacttcaatcacacttaatttatttt 41110474  T
Q  101 ggaaaaacatgctatatagtacgtagtttaaacaagcaaactaaattttctcctccattcccctcctaaaccctcaatccaaacaaaaccttaaa 195  Q
     |||||||||| ||| |||| |||| |||||| | | ||| ||||  |||  |||| ||||||||  |||||||||||||||||| | |||||||    
T  41110475 cgaaaaacatgttatctagtccgtaatttaaaaacgaaaagtaaaccttcctctcccttcccctcacaaaccctcaatccaaacacacccttaaa 41110569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 24560407 - 24560223
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttatttt 100  Q
    ||||||||||||||| || ||||| |||||| ||||| ||||||||||||||| |||||||||| || |||||| |||||||||||| || |||||||||    
T  24560407 tcatttttaaattaccgacactatgaaatgttttttaaaaagttaacatattaacatgataaacgatcatataatacttcaatcacatttaatttatttt 24560308  T
Q  101 ggaaaaacatgctatatagtacgtagtttaaacaagcaaactaaattttctcctccattcccctcctaaaccctcaatccaaaca 185  Q
     |||||||||| || ||||| |||| |||||| ||| |||  |||   || ||||| ||||||||||||||||| ||||||||||    
T  24560307 agaaaaacatgttacatagtccgtaatttaaaaaagaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaaca 24560223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 3 - 198
Target Start/End: Complemental strand, 21773970 - 21773775
Alignment:
Q  3 atttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttattttgg 102  Q
    |||||||||||||| | ||||  |||||| ||||| ||||||||||||||  ||||||||||||| ||||||  |||||||||||||| ||||||||| |    
T  21773970 atttttaaattacgaacactaggaaatgttttttaaaaagttaacatatttacatgataaacaatcatataattcttcaatcacacttaatttattttag 21773871  T
Q  103 aaaaacatgctatatagtacgtagtttaaacaagcaaactaaattttctcctccattcccctcctaaaccctcaatccaaacaaaaccttaaagtt 198  Q
    ||||||||| |||||||| |||| |||| | ||| ||| || |   |  | ||| ||||||||||||||| |||||||||||| | ||||| ||||    
T  21773870 aaaaacatgttatatagtccgtaatttagaaaagaaaagtatacccttccttcccttcccctcctaaaccttcaatccaaacatacccttagagtt 21773775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 18654654 - 18654839
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttatttt 100  Q
    ||||||||||||||||||  ||||||||| | ||||  | ||||||||||||| |||||||||  || |||||| |||||||| |||||| |||||||||    
T  18654654 tcatttttaaattacggaccctataaaatattttttgaagagttaacatattaacatgataaatgatcatataatacttcaattacacttaatttatttt 18654753  T
Q  101 ggaaaaacatgctatatagtacgtagtttaaacaa-gcaaactaaattttctcctccattcccctcctaaaccctcaatccaaaca 185  Q
     || ||||||| |||||||| |||| |||||| || | |||  ||| | || ||||| ||||||||||||||||||||| ||||||    
T  18654754 agagaaacatgttatatagtccgtaatttaaaaaaagtaaaacaaactctcccctcccttcccctcctaaaccctcaattcaaaca 18654839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 14898170 - 14897982
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttag----aaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgattta 96  Q
    |||||||||||||||||| | || ||||||| ||||      |||||||| |||||| || ||||||| || |||||| ||||||||||||||| |||||    
T  14898170 tcatttttaaattacggacattacaaaatgttttttttttttaaagttaatatattaacacgataaacgatcatataatacttcaatcacacttaattta 14898071  T
Q  97 ttttggaaaaacatgctatatagtacgtagtttaaacaagcaaactaaattttctcctccattcccctcctaaaccctcaatccaaaca 185  Q
    |||| ||||||||||  |||||||  ||| |||||| ||| ||| |||| ||||  |||| |||||||||||||| |||||||||||||    
T  14898070 ttttagaaaaacatgtcatatagtctgtaatttaaaaaagaaaagtaaaatttcctctcccttcccctcctaaactctcaatccaaaca 14897982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 30200142 - 30200319
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaaca---atgatataaaacttcaatcacacttgatttat 97  Q
    |||||||||||||||||| ||||| |||||| ||||| |||||| |||||||| ||| |||||||   || |||||  |||| |||||||||||||||||    
T  30200142 tcatttttaaattacggacactatgaaatgttttttaaaaagtttacatattaacataataaacaacgatcatatagtactttaatcacacttgatttat 30200241  T
Q  98 tttggaaaaacatgctatatagtacgtagtttaaacaagcaaactaaattttctcctccattcccctcctaaaccctc 175  Q
    ||| |||||||||| |||||||| |||| |||||| ||| ||| ||||   |  ||||| ||||||||||| ||||||    
T  30200242 tttagaaaaacatgttatatagtccgtaatttaaaaaagaaaagtaaacccttccctcccttcccctcctataccctc 30200319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 16275759 - 16275875
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttatttt 100  Q
    ||||||||||||| |||| | ||| |||||| || || ||||||||| ||||| ||||||||||||  |||||| |||||||||||||||||||||||||    
T  16275759 tcatttttaaatttcggacattatgaaatgttttataaaaagttaacttattaacatgataaacaaccatataatacttcaatcacacttgatttatttt 16275858  T
Q  101 ggaaaaacatgctatat 117  Q
     |||||||||| |||||    
T  16275859 agaaaaacatgttatat 16275875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 37102203 - 37102334
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttatttt 100  Q
    |||||||||||||||||| ||||| |||||| ||||| ||||||||||||||| ||| || ||| || |||||| ||||||| |||||||||||||||||    
T  37102203 tcatttttaaattacggacactatgaaatgttttttaaaaagttaacatattaacataat-aacgatcatataatacttcaaccacacttgatttatttt 37102301  T
Q  101 -ggaaaaacatgctatatagtacgtagtttaaa 132  Q
     | ||||||||| |||||||| |||| ||||||    
T  37102302 agaaaaaacatgttatatagtccgtaatttaaa 37102334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 36568957 - 36569072
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttatttt 100  Q
    ||||||||||||| || | ||||| |||||| ||| | ||||||||||||||| |||||||||||||  ||||| | ||||||||||||| |||||||||    
T  36568957 tcatttttaaatttcgaacactatgaaatgtttttcaaaaagttaacatattaacatgataaacaatcgtataatagttcaatcacacttaatttatttt 36569056  T
Q  101 ggaaaaacatgctata 116  Q
     |||||||||| ||||    
T  36569057 agaaaaacatgatata 36569072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 9312525 - 9312635
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttatttt 100  Q
    ||||||||||||||| || ||||| |||| | || || ||||||||||||||| ||||||||||||| |||||| |||  |||||||||| |||||||||    
T  9312525 tcatttttaaattacagacactatgaaatattttgtaaaaagttaacatattaacatgataaacaatcatataatactcaaatcacacttaatttatttt 9312624  T
Q  101 ggaaaaacatg 111  Q
     ||||| ||||    
T  9312625 agaaaatcatg 9312635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 48 - 185
Target Start/End: Original strand, 28582610 - 28582747
Alignment:
Q  48 atattagcatgataaacaatgatataaaacttcaatcacacttgatttattttggaaaaacatgctatatagtacgtagtttaaacaagcaaactaaatt 147  Q
    |||||| ||| |||||| || |||||| ||||||| |||||||||||||| || |||||||||| ||||| || |||| |||||| ||| ||| ||||      
T  28582610 atattaacataataaacgataatataatacttcaaccacacttgatttatcttagaaaaacatgttatatcgtccgtaatttaaaaaagaaaagtaaacc 28582709  T
Q  148 ttctcctccattcccctcctaaaccctcaatccaaaca 185  Q
     || ||||| ||||||||||||| ||||| ||||||||    
T  28582710 ctcccctcccttcccctcctaaatcctcagtccaaaca 28582747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 4 - 132
Target Start/End: Complemental strand, 37807267 - 37807139
Alignment:
Q  4 tttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttga-tttattttgg 102  Q
    ||||||||||  ||| ||||| |||||| ||||| |||||||| |||||| |||||||||| || |||||| ||||||||||||||| | ||||||||      
T  37807267 tttttaaattttggacactatgaaatgttttttaaaaagttaatatattaacatgataaacgatcatataatacttcaatcacacttaattttatttttt 37807168  T
Q  103 aaaaacatgctatatagtacgtagtttaaa 132  Q
    ||||| ||| |||||||| |||||||||||    
T  37807167 aaaaa-atgttatatagttcgtagtttaaa 37807139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 119
Target Start/End: Original strand, 2387817 - 2387932
Alignment:
Q  4 tttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttattttgga 103  Q
    ||||||||||||||| |||||  ||||| |||||  ||||||| ||| || |||||||||| || |||||| | || |||||||||| ||||||||| ||    
T  2387817 tttttaaattacggacactatggaatgttttttaataagttaaaataataacatgataaacgatcatataataatttaatcacacttaatttattttaga 2387916  T
Q  104 aaaacatgctatatag 119  Q
    |||||||| |||||||    
T  2387917 aaaacatgttatatag 2387932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 44 - 182
Target Start/End: Original strand, 27542028 - 27542166
Alignment:
Q  44 taacatattagcatgataaacaatgatataaaacttcaatcacacttgatttattttggaaaaacatgctatatagtacgtagtttaaacaagcaaacta 143  Q
    |||||||||| |||||||||| || |||||| |||||||||||| || ||||||||| |||||| ||| |||||||| | || |||||| ||| |||  |    
T  27542028 taacatattaacatgataaacgatcatataatacttcaatcacagttaatttattttagaaaaatatgttatatagttcataatttaaaaaagaaaaaca 27542127  T
Q  144 aattttctcctccattcccctcctaaaccctcaatccaa 182  Q
    || | || ||||| | |||||| ||||||||| ||||||    
T  27542128 aactctcccctccctgcccctcgtaaaccctcgatccaa 27542166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 40463925 - 40464031
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttatttt 100  Q
    |||||||||||||||||| |||||||| ||| ||||| ||  |||| | | || ||||||||||||| |||||||| ||||||| ||||| |||||||||    
T  40463925 tcatttttaaattacggacactataaattgttttttaaaatattaaaacaataacatgataaacaatcatataaaaattcaatctcacttaatttatttt 40464024  T
Q  101 ggaaaaa 107  Q
     ||||||    
T  40464025 agaaaaa 40464031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 185
Target Start/End: Complemental strand, 52474103 - 52473921
Alignment:
Q  3 atttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttattttgg 102  Q
    ||||||||||||||||| |||| |||| | || || |||||||||||||||  |||||||||| | |||||| ||||||||||||  | |||||||||      
T  52474103 atttttaaattacggatcctatgaaatattttgtaaaaagttaacatattaatatgataaacagtcatataatacttcaatcacatgtaatttattttaa 52474004  T
Q  103 aaaaacatgctatatagtacgtagtttaaacaagcaaactaaattttctcctccattcccctcctaaaccctcaatccaaaca 185  Q
    || |||||| |||||| | |||| |||||| ||| ||| | || | || | |   ||||||||| |||| |||||||||||||    
T  52474003 aataacatgttatataatccgtaatttaaaaaagaaaattgaactctcccatttcttcccctcccaaactctcaatccaaaca 52473921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 25655024 - 25655219
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaat--gatataaaacttcaatcacacttgatttatt 98  Q
    ||||||||| |||||| | ||||  |||||| ||||  | |||||||||||||  ||||||||  ||   |||||| ||||||||||||||| |||||||    
T  25655024 tcatttttatattacgaacactaagaaatgttttttgaagagttaacatattaatatgataaatgatcatatataatacttcaatcacacttaatttatt 25655123  T
Q  99 ttggaaaaacatgctatatagtacgtagtttaaacaagcaaactaaattttctcctccattcccctcctaaaccctcaatccaaacaaaaccttaa 194  Q
    || |||||||||| |||||||| |||| |||||| | | ||  ||||   || ||||| ||| |||| | ||||||||||||||||| | ||||||    
T  25655124 ttagaaaaacatgttatatagtccgtaatttaaaaatgaaagttaaaccctcccctcccttctcctcttcaaccctcaatccaaacacacccttaa 25655219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 5 - 100
Target Start/End: Original strand, 41040008 - 41040103
Alignment:
Q  5 ttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttatttt 100  Q
    ||||||||||| || ||||| |||| | || || ||||||||||||||| ||||||||||||| |||||| ||||||||||| |||  ||||||||    
T  41040008 ttttaaattacagacactatgaaatattttataaaaagttaacatattaacatgataaacaatcatataatacttcaatcacgcttactttatttt 41040103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 44 - 185
Target Start/End: Complemental strand, 46205033 - 46204892
Alignment:
Q  44 taacatattagcatgataaacaatgatataaaacttcaatcacacttgatttattttggaaaaacatgctatatagtacgtagtttaaacaagcaaacta 143  Q
    ||||||||||  ||| ||||  || |||||| ||||||||||||||| ||||||||| |||||||||| |||||||| | || |||||| ||| ||| ||    
T  46205033 taacatattaatatgttaaatgatcatataatacttcaatcacacttaatttattttagaaaaacatgttatatagttcataatttaaaaaagaaaagta 46204934  T
Q  144 aattttctcctccattcccctcctaaaccctcaatccaaaca 185  Q
    ||   |||| ||  ||| ||| |||||||||| |||||||||    
T  46204933 aacactctcatctcttctcctgctaaaccctcgatccaaaca 46204892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 132
Target Start/End: Original strand, 10748345 - 10748482
Alignment:
Q  2 catttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaa-------tgatataaaacttcaatcacacttgatt 94  Q
    ||||||||||||||||  | |||||||||| ||||| ||||||||||||||| |||||||||  |       | |||||| ||||  ||||||||| |||    
T  10748345 catttttaaattacgggcattataaaatgttttttaaaaagttaacatattaacatgataaatgataaaaggtcatataatacttttatcacacttaatt 10748444  T
Q  95 tattttggaaaaacatgctatatagtacgtagtttaaa 132  Q
    |||||| |||||||||| |||||| | |||| ||||||    
T  10748445 tattttagaaaaacatgttatatactccgtaatttaaa 10748482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 46556335 - 46556189
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaa--cttcaatcacacttgatttatt 98  Q
    |||||||| ||||||||| ||||| | || | ||||| |||||||| |||||| ||||| ||||  | ||||| ||  |||||||||||||  |||||||    
T  46556335 tcatttttcaattacggacactatgacatattttttaaaaagttaagatattaacatgacaaacggtcatatataatacttcaatcacactcaatttatt 46556236  T
Q  99 ttggaaaaacatgctatatagtacgtagtttaaacaagcaaactaaa 145  Q
    ||||||||||||  ||||||||  ||| |||||| ||| ||| ||||    
T  46556235 ttggaaaaacatattatatagtctgtaatttaaaaaagaaaattaaa 46556189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 107
Target Start/End: Complemental strand, 52185202 - 52185100
Alignment:
Q  3 atttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttattttgg 102  Q
    |||||||||||| ||| ||||  |||| | || || ||||||||||||||| ||||||||||||| |||||| |||||||| | | || ||||||||| |    
T  52185202 atttttaaattatggacacta--aaatattttataaaaagttaacatattaacatgataaacaatcatataatacttcaattatatttaatttattttag 52185105  T
Q  103 aaaaa 107  Q
    |||||    
T  52185104 aaaaa 52185100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 33 - 185
Target Start/End: Original strand, 43005825 - 43005977
Alignment:
Q  33 ttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttattttggaaaaacatgctatatagtacgtagtttaaa 132  Q
    ||||| |||||||||||||||  ||||||||  || |||||| |||||||||| | |  ||||||||| |||||| ||| ||||||||  | | ||||||    
T  43005825 ttttaaaaagttaacatattaatatgataaaatatcatataatacttcaatcaaattaaatttattttagaaaaatatgttatatagtttggaatttaaa 43005924  T
Q  133 caagcaaactaaattttctcctccattcccctcctaaaccctcaatccaaaca 185  Q
     ||| ||| |||||  |||| | | || ||||  |||||||||||||||||||    
T  43005925 aaagaaaattaaatcctctctttcctttcccttataaaccctcaatccaaaca 43005977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 132
Target Start/End: Complemental strand, 55327557 - 55327429
Alignment:
Q  4 tttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttattttgga 103  Q
    ||||||||| ||||| | ||| |||||| ||||| ||||||| | ||||| ||| |||||| |  ||||||  ||||||||||| |||||||||||  ||    
T  55327557 tttttaaatcacggacattatgaaatgttttttaaaaagttagcgtattaacataataaacgaacatataatgcttcaatcacatttgatttatttaaga 55327458  T
Q  104 aaaacatgctatatagtacgtagtttaaa 132  Q
    ||| |||| ||| |||| |||| ||||||    
T  55327457 aaagcatgttatgtagtccgtaatttaaa 55327429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 185
Target Start/End: Complemental strand, 27541973 - 27541937
Alignment:
Q  149 tctcctccattcccctcctaaaccctcaatccaaaca 185  Q
    |||||||| ||||||||||||||||||||||||||||    
T  27541973 tctcctcccttcccctcctaaaccctcaatccaaaca 27541937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 122 - 185
Target Start/End: Original strand, 55428554 - 55428617
Alignment:
Q  122 cgtagtttaaacaagcaaactaaattttctcctccattcccctcctaaaccctcaatccaaaca 185  Q
    |||| |||||| ||| ||| |||||  || ||||| ||||||||||||||||||||||||||||    
T  55428554 cgtaatttaaagaagaaaagtaaatcatcccctcccttcccctcctaaaccctcaatccaaaca 55428617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 199
Target Start/End: Original strand, 6803323 - 6803453
Alignment:
Q  69 atataaaacttcaatcacacttgatttattttggaaaaacatgctatatagtacgtagtttaaacaagcaaactaaattttctcctccattcccctccta 168  Q
    |||||| | ||||||||||| | |||||||||  |||||| |  |  |||||  ||| |||||| ||| ||| |||| | |||||||  |||||||||||    
T  6803323 atataatagttcaatcacacataatttattttataaaaacttattgcatagtctgtaatttaaaaaagaaaattaaactctctcctctcttcccctccta 6803422  T
Q  169 aaccctcaatccaaacaaaaccttaaagttt 199  Q
    |||| |||||||||||| |  ||||||||||    
T  6803423 aaccttcaatccaaacacacacttaaagttt 6803453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 152 - 193
Target Start/End: Original strand, 46205097 - 46205138
Alignment:
Q  152 cctccattcccctcctaaaccctcaatccaaacaaaacctta 193  Q
    |||||||||||||||||||||||  ||||||||||| |||||    
T  46205097 cctccattcccctcctaaacccttcatccaaacaaaccctta 46205138  T

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Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 120
Target Start/End: Complemental strand, 651917 - 651802
Alignment:
Q  4 tttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttattttgga 103  Q
    ||||||||||| ||| ||||| |||||| ||||  ||| |||| ||| || ||||| |||  ||  ||||| | || |||||||||| ||||||||| ||    
T  651917 tttttaaattatggaaactatgaaatgt-ttttgaaaaattaaaataataacatgacaaaggatcgtataatattttaatcacacttaatttattttaga 651819  T
Q  104 aaaacatgctatatagt 120  Q
    |||||||| ||||||||    
T  651818 aaaacatgttatatagt 651802  T

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Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 95
Target Start/End: Original strand, 13082954 - 13083010
Alignment:
Q  39 aaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgattt 95  Q
    ||||||||||||||| ||| |||||| || |||||| |||||||| |||||| ||||    
T  13082954 aaagttaacatattaacataataaacgatcatataatacttcaattacacttcattt 13083010  T

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Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 24253909 - 24253813
Alignment:
Q  4 tttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttatttt 100  Q
    ||||||||||||||| | |||||||||  |||||||||||| |  ||  | |||||||||  || |||||| |||||||  |||||| |||||||||    
T  24253909 tttttaaattacggacattataaaatgagttttagaaagttgaattaacaacatgataaatgattatataacacttcaaaaacacttaatttatttt 24253813  T

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Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 120
Target Start/End: Original strand, 54574470 - 54574534
Alignment:
Q  56 atgataaacaatgatataaaacttcaatcacacttgatttattttggaaaaacatgctatatagt 120  Q
    |||||||||  | |||||| ||||||||||| ||| ||||||||| ||||||| || ||||||||    
T  54574470 atgataaacggttatataatacttcaatcacgcttaatttattttagaaaaacgtgttatatagt 54574534  T

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Target: scaffold0067 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 39241 - 39442
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttc---aatcacacttgatttat 97  Q
    |||||||||||||||||| ||||| |||||| ||||| ||||||||||||||| |||||||||  || |||||| |||||   |||||||||| ||||||    
T  39241 tcatttttaaattacggacactatgaaatgttttttaaaaagttaacatattaacatgataaatgatcatataatacttcttcaatcacacttaatttat 39340  T
Q  98 tttggaaaaacatgctatatagtacgtagtttaaacaagcaaactaaattttctcctccattcccctcctaaaccctcaatccaaacaaaaccttaaagt 197  Q
    ||| |||||||||| || ||||| |||| |||||| ||| ||| ||||   || ||||| || |||| |||||||||||||||||||| | |||||| ||    
T  39341 tttagaaaaacatgttacatagtccgtaatttaaaaaagaaaagtaaaccctcccctccctttcccttctaaaccctcaatccaaacacacccttaatgt 39440  T
Q  198 tt 199  Q
    ||    
T  39441 tt 39442  T

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Target: scaffold0171 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 16140 - 15964
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttatttt 100  Q
    |||||||||||||||||||| ||| |||||| ||||| |||||||||||||||  |||| ||||||| ||| || ||||||||||||| | |||| ||||    
T  16140 tcatttttaaattacggatattatgaaatgttttttaaaaagttaacatattaatatgaaaaacaattataaaatacttcaatcacacataatttttttt 16041  T
Q  101 ggaaaaacatgctatatagtacgtagtttaaacaagcaaactaaattttctcctccattcccctcctaaaccctcaa 177  Q
      ||||||||| ||||||||  ||| |||||| ||| ||| |||| | |||| ||   | |||||||||||||||||    
T  16040 aaaaaaacatgttatatagtctgtaatttaaaaaagaaaagtaaactctctcatctcgttccctcctaaaccctcaa 15964  T

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Target: scaffold0262 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 16350 - 16469
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttatttt 100  Q
    |||||||||||||| | | ||||| |||||| || || || |||||||||||| ||||||||||||| |||||| ||||||||||||||| |||||||||    
T  16350 tcatttttaaattatgaacactatgaaatgttttataaaacgttaacatattaacatgataaacaatcatataatacttcaatcacacttaatttatttt 16449  T
Q  101 ggaaaaacatgctatatagt 120  Q
     || ||||||| ||||||||    
T  16450 agacaaacatgttatatagt 16469  T

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Target: scaffold0294 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 3 - 132
Target Start/End: Complemental strand, 15450 - 15322
Alignment:
Q  3 atttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttattttgg 102  Q
    |||||||||||||||| ||||| || ||| ||||| || || ||||||||| | ||||||||||| |||||| ||||||| ||||||| ||||||||| |    
T  15450 atttttaaattacggacactatgaa-tgttttttaaaaggtcaacatattaacgtgataaacaatcatataatacttcaaccacacttaatttattttag 15352  T
Q  103 aaaaacatgctatatagtacgtagtttaaa 132  Q
    ||||||||| ||| || | |||||||||||    
T  15351 aaaaacatgttatgtaatccgtagtttaaa 15322  T

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Target: scaffold0026 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 1362 - 1178
Alignment:
Q  1 tcatttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaa----acttcaatcacacttgattta 96  Q
    |||||||||||||| | | ||||| |||||| ||||| ||||||||||||||  |||||||||| || ||||| |    |||||| ||| |||| ||||     
T  1362 tcatttttaaattatgaacactatgaaatgttttttaaaaagttaacatattgtcatgataaacgatcatatatataatacttcagtcatacttaattt- 1264  T
Q  97 ttttggaaaaacatgctatatagtacgtagtttaaacaagcaaactaaattttctcctccattcccctcctaaaccctcaatccaaaca 185  Q
       | ||| |||||| || ||||| |||| |||||| ||| ||| |||| | || ||||  ||||||||||||||||||||||||||||    
T  1263 ---tagaataacatgttacatagtccgtaatttaaaaaagaaaagtaaactctcccctctcttcccctcctaaaccctcaatccaaaca 1178  T

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Target: scaffold0096 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 185
Target Start/End: Complemental strand, 6770 - 6590
Alignment:
Q  4 tttttaaattacggatactataaaatgtcttttagaaagttaacatattagcatgataaacaatgatataaaacttcaatcacacttgatttattttgga 103  Q
    ||||||||||||| | ||||| |||| | ||| | ||| |||| |||||| ||| |||||| || |||||| ||||||||||||||  ||||||||| ||    
T  6770 tttttaaattacgcacactatgaaatatttttaaaaaaattaaaatattaacat-ataaacgatcatataatacttcaatcacactaaatttattttaga 6672  T
Q  104 aaaacatgctatatagtacgtagtttaaacaagcaaactaaattttctcctccattcccctcctaaaccctcaatccaaaca 185  Q
    | |||| | ||||||||  ||| |||||| ||| ||| ||||   || ||||| ||| ||||||||| | ||||||||||||    
T  6671 ataacaagttatatagtctgtaatttaaaaaagaaaagtaaaccctcccctcccttctcctcctaaaacttcaatccaaaca 6590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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