View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11714_high_21 (Length: 378)

Name: NF11714_high_21
Description: NF11714
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11714_high_21
NF11714_high_21
[»] chr8 (28 HSPs)
chr8 (25-368)||(10678170-10678494)
chr8 (286-368)||(35181516-35181598)
chr8 (286-368)||(34304788-34304870)
chr8 (286-368)||(16603644-16603726)
chr8 (286-368)||(1375542-1375624)
chr8 (286-368)||(18066736-18066818)
chr8 (288-368)||(20148762-20148842)
chr8 (286-368)||(5754903-5754985)
chr8 (286-368)||(11582766-11582848)
chr8 (287-368)||(16358851-16358933)
chr8 (286-368)||(29705362-29705444)
chr8 (286-368)||(36743501-36743583)
chr8 (288-368)||(29800968-29801048)
chr8 (288-368)||(33630011-33630091)
chr8 (288-368)||(42295197-42295277)
chr8 (286-326)||(19386630-19386670)
chr8 (288-368)||(26125637-26125717)
chr8 (286-366)||(30660762-30660842)
chr8 (288-368)||(30912580-30912660)
chr8 (288-368)||(42699259-42699339)
chr8 (286-369)||(2165980-2166063)
chr8 (286-368)||(40528652-40528735)
chr8 (294-368)||(31384672-31384746)
chr8 (286-368)||(42197453-42197535)
chr8 (287-368)||(45397317-45397398)
chr8 (286-368)||(2546996-2547078)
chr8 (140-177)||(43892398-43892435)
chr8 (288-368)||(3743773-3743853)
[»] chr3 (23 HSPs)
chr3 (286-368)||(25996268-25996350)
chr3 (286-368)||(9434124-9434206)
chr3 (286-368)||(10457910-10457992)
chr3 (286-368)||(4190283-4190365)
chr3 (286-368)||(52627995-52628077)
chr3 (286-368)||(42100688-42100770)
chr3 (286-368)||(45126946-45127028)
chr3 (286-368)||(51757593-51757675)
chr3 (286-368)||(34791829-34791911)
chr3 (286-368)||(40808865-40808947)
chr3 (286-368)||(46941053-46941135)
chr3 (287-368)||(54237097-54237178)
chr3 (286-368)||(24688420-24688502)
chr3 (286-368)||(25413681-25413763)
chr3 (286-368)||(36150130-36150212)
chr3 (286-368)||(54246166-54246248)
chr3 (287-368)||(40480750-40480831)
chr3 (287-368)||(42394437-42394518)
chr3 (290-368)||(29558252-29558330)
chr3 (288-368)||(27748565-27748645)
chr3 (288-368)||(53581876-53581956)
chr3 (286-368)||(47191044-47191125)
chr3 (286-368)||(53273702-53273784)
[»] chr1 (23 HSPs)
chr1 (286-368)||(35003294-35003376)
chr1 (286-368)||(48119628-48119710)
chr1 (286-368)||(38113213-38113295)
chr1 (286-368)||(44112677-44112759)
chr1 (286-368)||(45639750-45639832)
chr1 (286-368)||(38335918-38336000)
chr1 (286-368)||(41065153-41065235)
chr1 (286-368)||(46168383-46168465)
chr1 (286-368)||(45427763-45427845)
chr1 (286-364)||(37814778-37814856)
chr1 (286-368)||(43571104-43571186)
chr1 (286-368)||(45705825-45705907)
chr1 (288-368)||(2497580-2497660)
chr1 (286-333)||(14427347-14427394)
chr1 (286-368)||(5489776-5489858)
chr1 (286-368)||(35000131-35000213)
chr1 (286-367)||(26585462-26585543)
chr1 (286-368)||(23989541-23989624)
chr1 (286-368)||(750323-750405)
chr1 (286-368)||(48498980-48499062)
chr1 (286-358)||(24769527-24769599)
chr1 (288-368)||(7447828-7447907)
chr1 (286-366)||(50448280-50448360)
[»] chr6 (18 HSPs)
chr6 (286-368)||(33242403-33242485)
chr6 (288-368)||(27441544-27441624)
chr6 (286-368)||(33253913-33253995)
chr6 (286-364)||(3213400-3213478)
chr6 (286-368)||(7273353-7273435)
chr6 (286-368)||(13743239-13743321)
chr6 (286-368)||(13748739-13748821)
chr6 (288-368)||(24204005-24204085)
chr6 (286-368)||(9698351-9698433)
chr6 (286-368)||(26670027-26670109)
chr6 (286-364)||(21293699-21293777)
chr6 (286-368)||(26466799-26466881)
chr6 (286-363)||(31109245-31109322)
chr6 (286-368)||(7292747-7292829)
chr6 (286-368)||(7367549-7367631)
chr6 (286-368)||(21279929-21280011)
chr6 (286-368)||(30014343-30014425)
chr6 (288-368)||(30735984-30736064)
[»] chr4 (36 HSPs)
chr4 (286-368)||(711960-712042)
chr4 (286-368)||(17619170-17619252)
chr4 (286-368)||(32728357-32728439)
chr4 (286-366)||(960890-960970)
chr4 (286-368)||(55272394-55272476)
chr4 (288-368)||(3756264-3756344)
chr4 (288-368)||(35037007-35037087)
chr4 (286-368)||(28982840-28982922)
chr4 (286-368)||(46827724-46827806)
chr4 (286-368)||(48435597-48435679)
chr4 (286-369)||(28988473-28988556)
chr4 (286-366)||(49229684-49229764)
chr4 (286-368)||(1771284-1771366)
chr4 (286-368)||(23035980-23036062)
chr4 (286-368)||(27864564-27864646)
chr4 (286-368)||(33703141-33703223)
chr4 (286-368)||(55966364-55966446)
chr4 (319-368)||(19879987-19880036)
chr4 (288-368)||(27893860-27893940)
chr4 (286-369)||(27316730-27316813)
chr4 (286-368)||(25051693-25051775)
chr4 (286-366)||(27550309-27550389)
chr4 (288-368)||(38851515-38851595)
chr4 (287-368)||(41878407-41878488)
chr4 (286-366)||(12496956-12497036)
chr4 (288-368)||(31680904-31680984)
chr4 (288-368)||(41327561-41327641)
chr4 (288-368)||(43514704-43514784)
chr4 (286-368)||(35017733-35017814)
chr4 (286-368)||(45490331-45490413)
chr4 (286-368)||(48463468-48463550)
chr4 (288-368)||(43949819-43949900)
chr4 (286-322)||(36004168-36004204)
chr4 (286-365)||(41847971-41848050)
chr4 (165-259)||(47209992-47210086)
chr4 (328-368)||(36004134-36004174)
[»] chr2 (27 HSPs)
chr2 (286-368)||(966852-966934)
chr2 (286-368)||(18491705-18491787)
chr2 (286-368)||(43114557-43114639)
chr2 (288-368)||(11825672-11825752)
chr2 (288-368)||(4299438-4299518)
chr2 (288-368)||(41281992-41282072)
chr2 (286-368)||(12415478-12415560)
chr2 (286-368)||(12427538-12427620)
chr2 (286-368)||(14285676-14285758)
chr2 (286-368)||(16803968-16804050)
chr2 (286-368)||(16843250-16843332)
chr2 (286-368)||(34895759-34895841)
chr2 (288-368)||(6518487-6518566)
chr2 (286-368)||(1750414-1750496)
chr2 (286-368)||(4764744-4764826)
chr2 (286-368)||(30838632-30838714)
chr2 (287-368)||(34817794-34817875)
chr2 (286-368)||(12302271-12302353)
chr2 (286-356)||(16096747-16096817)
chr2 (287-368)||(19047158-19047239)
chr2 (288-369)||(43490418-43490499)
chr2 (288-366)||(7070418-7070496)
chr2 (286-368)||(13780753-13780835)
chr2 (288-368)||(8896601-8896681)
chr2 (288-365)||(33229303-33229381)
chr2 (286-368)||(43335781-43335863)
chr2 (286-322)||(42849910-42849946)
[»] scaffold0003 (1 HSPs)
scaffold0003 (288-368)||(45737-45817)
[»] chr7 (27 HSPs)
chr7 (286-368)||(31513287-31513369)
chr7 (286-368)||(40236919-40237001)
chr7 (286-368)||(27535249-27535331)
chr7 (287-364)||(31408655-31408732)
chr7 (288-368)||(4638217-4638297)
chr7 (288-368)||(10573751-10573831)
chr7 (288-368)||(44326180-44326260)
chr7 (286-368)||(33384870-33384953)
chr7 (286-368)||(5194249-5194331)
chr7 (286-368)||(5810942-5811024)
chr7 (286-368)||(24001030-24001112)
chr7 (286-368)||(42538449-42538531)
chr7 (105-205)||(25663952-25664052)
chr7 (286-353)||(39998408-39998475)
chr7 (286-368)||(35069721-35069803)
chr7 (286-368)||(45326020-45326102)
chr7 (289-366)||(26898422-26898499)
chr7 (288-368)||(43343642-43343722)
chr7 (288-368)||(44416952-44417032)
chr7 (286-368)||(5015395-5015477)
chr7 (286-368)||(24280614-24280696)
chr7 (286-368)||(42972852-42972934)
chr7 (286-343)||(41861674-41861731)
chr7 (295-366)||(32029837-32029908)
chr7 (286-368)||(9216302-9216383)
chr7 (286-368)||(43317443-43317525)
chr7 (288-368)||(16180375-16180454)
[»] chr5 (13 HSPs)
chr5 (286-368)||(17208074-17208156)
chr5 (286-368)||(32473412-32473494)
chr5 (286-368)||(7617133-7617215)
chr5 (286-368)||(30622737-30622818)
chr5 (286-364)||(38470579-38470657)
chr5 (286-358)||(33855071-33855143)
chr5 (286-368)||(2614667-2614749)
chr5 (286-368)||(22512305-22512387)
chr5 (286-368)||(41334681-41334763)
chr5 (288-368)||(5256997-5257077)
chr5 (286-368)||(18033982-18034064)
chr5 (286-368)||(33801469-33801551)
chr5 (288-343)||(25915030-25915085)
[»] scaffold0385 (1 HSPs)
scaffold0385 (286-368)||(11251-11333)
[»] scaffold0100 (1 HSPs)
scaffold0100 (286-368)||(35474-35556)
[»] scaffold0119 (1 HSPs)
scaffold0119 (286-368)||(685-767)
[»] scaffold0038 (1 HSPs)
scaffold0038 (287-368)||(112656-112737)
[»] scaffold0187 (2 HSPs)
scaffold0187 (286-368)||(14206-14288)
scaffold0187 (286-368)||(24534-24616)
[»] scaffold0157 (1 HSPs)
scaffold0157 (286-366)||(23441-23521)


Alignment Details
Target: chr8 (Bit Score: 220; Significance: 1e-121; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 25 - 368
Target Start/End: Complemental strand, 10678494 - 10678170
Alignment:
Q  25 gttgttggaaggtaatggttaaaagtcatcaaagaccgttgatatctctaggaaactccttttagatcaatcatatctcaacaaagattaatttctcaag 124  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||    |||| ||||||||||||||||||||||    
T  10678494 gttgttggaaggtaatggttaaaagtcatcaaagaccgttgatatctcaaggaaactccttctagatca----tatcccaacaaagattaatttctcaag 10678399  T
Q  125 gagaaatgtcttaacaccgggtgcttcttagaattgtgctttttgtggtggtggtgaggaaagttcttctcacatcttcttgcattgtgatgtggtgttt 224  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10678398 gagaaatgtcttaacaccgggtgcttcttagaattgtgctttttgtggtggtggtgaggaaagttcttctcacatcttcttgcattgtgatgtggtgttt 10678299  T
Q  225 aaggtttggctaaaggtgttcaggcggcttaatttgtaattacaacnnnnnnnnnnnnnnnggaaaatgttacatgaacaccctttaatcatacacccta 324  Q
    ||||||||||||||||||||||||||||||||||||||||||||||               ||||||||||||||||| ||||||||||||             
T  10678298 aaggtttggctaaaggtgttcaggcggcttaatttgtaattacaac---caacaaaaaaaaggaaaatgttacatgaataccctttaatca--------- 10678211  T
Q  325 ttgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
       |||||||||||||||||||||||||||||||||||||||||    
T  10678210 ---tacaccccatatattaaggacattttggtaaattcatctca 10678170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 286 - 368
Target Start/End: Original strand, 35181516 - 35181598
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||  |||| |||||||||||||| |||||||||    
T  35181516 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattttggtaatttcatctca 35181598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 286 - 368
Target Start/End: Original strand, 34304788 - 34304870
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||  |||| |||||||||||||| |||||||||    
T  34304788 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattagggacattttggtaatttcatctca 34304870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 286 - 368
Target Start/End: Complemental strand, 16603726 - 16603644
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    ||||||||||||||| |||||||||||||||||||| |||| ||||||||||  ||||| |||||||||||||||||||||||    
T  16603726 ggaaaatgttacatgcacaccctttaatcatacaccttattatacaccccatgcattaaagacattttggtaaattcatctca 16603644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 286 - 368
Target Start/End: Original strand, 1375542 - 1375624
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    ||||||| ||||||||||||| |||| |||||||||| |||||||||||||||||||| ||| ||||||||||||| ||||||    
T  1375542 ggaaaattttacatgaacaccttttattcatacacccaattgtacaccccatatattagggatattttggtaaatttatctca 1375624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 286 - 368
Target Start/End: Complemental strand, 18066818 - 18066736
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    ||||||||||||||||||||||||||||||||||  |||||||||| ||||| ||||| ||| ||||| |||| |||||||||    
T  18066818 ggaaaatgttacatgaacaccctttaatcatacattctattgtacatcccatgtattagggatattttagtaatttcatctca 18066736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 288 - 368
Target Start/End: Original strand, 20148762 - 20148842
Alignment:
Q  288 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    |||||||||||| ||||||||||| ||||||| || |||||||||| ||||||||| ||| |||||||||| |||||||||    
T  20148762 aaaatgttacataaacaccctttattcatacatcccattgtacacctcatatattagggatattttggtaagttcatctca 20148842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 286 - 368
Target Start/End: Original strand, 5754903 - 5754985
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    ||||||||||||||||||||| |||| || |||| || |||||||| ||||||||||| ||| |||||||||| |||||||||    
T  5754903 ggaaaatgttacatgaacaccttttattcctacatcccattgtacatcccatatattagggatattttggtaagttcatctca 5754985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 286 - 368
Target Start/End: Original strand, 11582766 - 11582848
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    |||||||||||||||||||||||||| || |||| || ||||||||||| || ||||| ||| |||||||||| |||||||||    
T  11582766 ggaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctca 11582848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 287 - 368
Target Start/End: Complemental strand, 16358933 - 16358851
Alignment:
Q  287 gaaaatgttacat-gaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||| |||||  |||||| | |||||| |||||||||||||    
T  16358933 gaaaatgttacattgaagaccctttaatcatacaccctattgtacatcccatgcattaagaatattttgataaattcatctca 16358851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 286 - 368
Target Start/End: Original strand, 29705362 - 29705444
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    |||||||||||||||||||||||||| |  ||||||| |||||||||||||| ||||| ||| |||||| ||| |||||||||    
T  29705362 ggaaaatgttacatgaacaccctttatttctacaccccattgtacaccccatgtattagggatattttgataagttcatctca 29705444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 286 - 368
Target Start/End: Complemental strand, 36743583 - 36743501
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    |||||||||||||||||||||||||| || |||| || ||||||||||| || ||||| ||| |||||||||| |||||||||    
T  36743583 ggaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctca 36743501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 288 - 368
Target Start/End: Complemental strand, 29801048 - 29800968
Alignment:
Q  288 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    |||||||||||| |||||| |||| ||||||| || |||||||||||||| ||||| ||| |||||||||| |||||||||    
T  29801048 aaaatgttacataaacaccatttattcatacatcccattgtacaccccatgtattagggatattttggtaagttcatctca 29800968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 288 - 368
Target Start/End: Complemental strand, 33630091 - 33630011
Alignment:
Q  288 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    ||||||||||| ||||||||||||||||||||||  ||||||||||| ||  |||| ||||||||| |||| |||||||||    
T  33630091 aaaatgttacacgaacaccctttaatcatacacctcattgtacaccctatgcattagggacattttagtaatttcatctca 33630011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 288 - 368
Target Start/End: Original strand, 42295197 - 42295277
Alignment:
Q  288 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    |||||||||||||||||||||||| || ||||||  ||||||||| |||| ||||| ||| |||||||||| |||||||||    
T  42295197 aaaatgttacatgaacaccctttattcctacacctcattgtacactccatgtattagggatattttggtaagttcatctca 42295277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 286 - 326
Target Start/End: Complemental strand, 19386670 - 19386630
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctatt 326  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  19386670 ggaaaatgttacatgaacaccctttaatcatacaccctatt 19386630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 288 - 368
Target Start/End: Original strand, 26125637 - 26125717
Alignment:
Q  288 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    |||||||||||| ||||||||||| |||||||  | ||||||||||| || ||||| ||| |||||||||| |||||||||    
T  26125637 aaaatgttacataaacaccctttattcatacattccattgtacaccctatgtattagggatattttggtaagttcatctca 26125717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 286 - 366
Target Start/End: Complemental strand, 30660842 - 30660762
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatct 366  Q
    |||||||||||||||||||||||||| |  |||| || ||||||||||| || ||||| ||| |||||||||| |||||||    
T  30660842 ggaaaatgttacatgaacaccctttatttctacatcccattgtacaccctatgtattagggatattttggtaagttcatct 30660762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 288 - 368
Target Start/End: Complemental strand, 30912660 - 30912580
Alignment:
Q  288 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    |||||||||||||||||||||||| || ||||||| |||||||||  ||| ||||| ||  |||||||||| |||||||||    
T  30912660 aaaatgttacatgaacaccctttattcctacaccccattgtacacttcatgtattaggggtattttggtaagttcatctca 30912580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 288 - 368
Target Start/End: Original strand, 42699259 - 42699339
Alignment:
Q  288 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    |||||||||||||||||||||||| || ||||||| ||||||||||  || ||||| ||| ||||| |||| |||||||||    
T  42699259 aaaatgttacatgaacaccctttattcctacaccccattgtacaccttatgtattatggatatttttgtaagttcatctca 42699339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 286 - 369
Target Start/End: Complemental strand, 2166063 - 2165980
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctcat 369  Q
    ||||||| ||||||||||||| |||| || ||||||| |||||| ||||||| |||||  || |||||||||| ||||||||||    
T  2166063 ggaaaatattacatgaacaccatttattcctacaccccattgtataccccatgtattagagatattttggtaagttcatctcat 2165980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 286 - 368
Target Start/End: Complemental strand, 40528735 - 40528652
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaat-catacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    |||||||  |||||||||||||||| || || | |||| |||||||||||||||||||| |||||||||| |||||| ||||||    
T  40528735 ggaaaataatacatgaacacccttttattcacaaaccccattgtacaccccatatattagggacattttgataaatttatctca 40528652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 294 - 368
Target Start/End: Original strand, 31384672 - 31384746
Alignment:
Q  294 ttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    |||||||||||||||||| || ||||  |||||||||||||||| ||||| | | |||||||||| |||||||||    
T  31384672 ttacatgaacaccctttattcttacattctattgtacaccccatgtattaggaatattttggtaagttcatctca 31384746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 286 - 368
Target Start/End: Complemental strand, 42197535 - 42197453
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    ||||||||||||||||||||| |||| || ||||||| |||| |||| | || ||||| ||| |||||||||| |||||||||    
T  42197535 ggaaaatgttacatgaacaccatttattcctacaccccattgcacacactatgtattagggatattttggtaagttcatctca 42197453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 287 - 368
Target Start/End: Original strand, 45397317 - 45397398
Alignment:
Q  287 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    ||||||||||| ||||||||||||| || ||||||| ||| ||||||| || ||||| ||| ||||| |||| |||||||||    
T  45397317 gaaaatgttacgtgaacaccctttattcctacaccccattctacaccctatgtattagggatatttttgtaagttcatctca 45397398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 286 - 368
Target Start/End: Original strand, 2546996 - 2547078
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    |||||||||||||||||||| ||||| |  ||||| | |||||||||| ||| ||||| ||| ||||| |||| |||||||||    
T  2546996 ggaaaatgttacatgaacactctttatttctacactccattgtacacctcatgtattagggatattttagtaagttcatctca 2547078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 177
Target Start/End: Original strand, 43892398 - 43892435
Alignment:
Q  140 accgggtgcttcttagaattgtgctttttgtggtggtg 177  Q
    ||||||||| |||| |||||||||||||||||||||||    
T  43892398 accgggtgcctctttgaattgtgctttttgtggtggtg 43892435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 368
Target Start/End: Original strand, 3743773 - 3743853
Alignment:
Q  288 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    |||||||| |||  |||||||||| |||| |  || ||| |||||||||||||||||| | |||||| ||| |||||||||    
T  3743773 aaaatgttccatatacaccctttattcatccctcccattatacaccccatatattaagtatattttgataagttcatctca 3743853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 75; Significance: 2e-34; HSPs: 23)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 286 - 368
Target Start/End: Original strand, 25996268 - 25996350
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    |||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||    
T  25996268 ggaaaatgttacatgaacaccctttaatcatacatcttattgtacaccccatatattaaggacattttggtaaattcatctca 25996350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 286 - 368
Target Start/End: Original strand, 9434124 - 9434206
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||  |||| |||||||||||||| |||||||||    
T  9434124 ggaaaatgttacatgaacaccctttaatcatacactctattgtacaccccatgcattagggacattttggtaatttcatctca 9434206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 286 - 368
Target Start/End: Complemental strand, 10457992 - 10457910
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||  |||||||| ||||||||||||| ||||||    
T  10457992 ggaaaatgttacatgaacaccttttaatcatacaccctattgtacaccccatgcattaaggatattttggtaaatttatctca 10457910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 286 - 368
Target Start/End: Complemental strand, 4190365 - 4190283
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  || |||||  || ||||||||||||||||||||    
T  4190365 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccttatgtattagagatattttggtaaattcatctca 4190283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 286 - 368
Target Start/End: Complemental strand, 52628077 - 52627995
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    |||||||||||| ||||||||||||||||||||| ||||||||||||| |||  |||||| | ||||||||||||||||||||    
T  52628077 ggaaaatgttacgtgaacaccctttaatcatacatcctattgtacacctcatgcattaagtatattttggtaaattcatctca 52627995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 286 - 368
Target Start/End: Original strand, 42100688 - 42100770
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    |||||||||||||||||||||||||| || ||||||  |||||||||||||| ||||| ||| |||||||||| |||||||||    
T  42100688 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctca 42100770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 286 - 368
Target Start/End: Complemental strand, 45127028 - 45126946
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    |||||||||||||| ||||||||||| ||||||| || |||||||||||||| ||||| ||| |||||||||| |||||||||    
T  45127028 ggaaaatgttacataaacaccctttattcatacatcccattgtacaccccatgtattagggatattttggtaagttcatctca 45126946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 286 - 368
Target Start/End: Original strand, 51757593 - 51757675
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    ||||||| |||||| ||||||||||||||||||||||||||||||||| |||  |||| ||||||||| |||| |||||||||    
T  51757593 ggaaaatattacataaacaccctttaatcatacaccctattgtacacctcatgcattatggacattttagtaatttcatctca 51757675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 286 - 368
Target Start/End: Original strand, 34791829 - 34791911
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    |||||||||||||||||||||||||||||||||||| ||||||| ||| |||  |||| |||||||||  ||| |||||||||    
T  34791829 ggaaaatgttacatgaacaccctttaatcatacaccatattgtaaacctcatgcattagggacattttaataatttcatctca 34791911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 286 - 368
Target Start/End: Original strand, 40808865 - 40808947
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    |||||||||||||| |||||| |||| || ||||||| |||||||||||||| ||||| ||| |||||||||| |||||||||    
T  40808865 ggaaaatgttacatcaacaccatttattcctacaccccattgtacaccccatgtattagggatattttggtaagttcatctca 40808947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 286 - 368
Target Start/End: Original strand, 46941053 - 46941135
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    |||||||||||||||||||||||||| || |||| |  |||||||||||||| ||||| ||| |||||||||| |||||||||    
T  46941053 ggaaaatgttacatgaacaccctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctca 46941135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 287 - 368
Target Start/End: Original strand, 54237097 - 54237178
Alignment:
Q  287 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    ||||||||||||||||||||||||| || |||| || ||||||||||| || ||||| ||| |||||||||| |||||||||    
T  54237097 gaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctca 54237178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 286 - 368
Target Start/End: Complemental strand, 24688502 - 24688420
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    |||||||||||||||||||||||||| |  ||||| | ||||||||||| || ||||| ||| |||||||||| |||||||||    
T  24688502 ggaaaatgttacatgaacaccctttatttctacactccattgtacaccctatgtattagggatattttggtaagttcatctca 24688420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 286 - 368
Target Start/End: Original strand, 25413681 - 25413763
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    |||||||||||||||||||||||||| || ||||||| ||||||||||  || ||||| ||| ||||| |||| |||||||||    
T  25413681 ggaaaatgttacatgaacaccctttattcctacaccccattgtacaccttatgtattagggatatttttgtaagttcatctca 25413763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 286 - 368
Target Start/End: Original strand, 36150130 - 36150212
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    ||||||||||||||||| |||||||| |||||||||| ||| ||||||| || ||| | ||| |||||||||| |||||||||    
T  36150130 ggaaaatgttacatgaataccctttattcatacaccccattatacaccctatgtatcagggatattttggtaagttcatctca 36150212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 286 - 368
Target Start/End: Complemental strand, 54246248 - 54246166
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    |||||||||||||||||||||||||| || ||||||| ||||||||||| || |||||  || ||||| |||| |||||||||    
T  54246248 ggaaaatgttacatgaacaccctttattcctacaccccattgtacaccctatgtattagagatatttttgtaagttcatctca 54246166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 287 - 368
Target Start/End: Original strand, 40480750 - 40480831
Alignment:
Q  287 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    ||||||||||||||||||||||||| |||||  ||| |||||||| || || ||||| ||| |||||||||| |||||||||    
T  40480750 gaaaatgttacatgaacaccctttattcatatgccccattgtacatcctatgtattagggatattttggtaagttcatctca 40480831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 287 - 368
Target Start/End: Complemental strand, 42394518 - 42394437
Alignment:
Q  287 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    ||||||||||||||||||||||||| || ||||  | ||||||||||| || ||||| ||| |||||||||| |||||||||    
T  42394518 gaaaatgttacatgaacaccctttattcctacattccattgtacaccctatgtattagggatattttggtaagttcatctca 42394437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 290 - 368
Target Start/End: Complemental strand, 29558330 - 29558252
Alignment:
Q  290 aatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    ||||||| |||||||||||||| ||||||| |  ||||||||||| |||||||| | | || |||||||||||||||||    
T  29558330 aatgttatatgaacaccctttattcatacatctcattgtacaccctatatattaggaatatattggtaaattcatctca 29558252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 288 - 368
Target Start/End: Original strand, 27748565 - 27748645
Alignment:
Q  288 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    ||||||||||||||||||| |||| |||||||||  ||| ||||||  || ||||| ||| |||||||||| |||||||||    
T  27748565 aaaatgttacatgaacaccttttattcatacacctcattatacaccttatgtattagggatattttggtaagttcatctca 27748645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 288 - 368
Target Start/End: Complemental strand, 53581956 - 53581876
Alignment:
Q  288 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    |||||||||||||||||| ||||| |||||||| | |||||||| || || ||||| ||| |||||| ||| |||||||||    
T  53581956 aaaatgttacatgaacactctttattcatacactccattgtacatcctatgtattagggatattttgataagttcatctca 53581876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 286 - 368
Target Start/End: Complemental strand, 47191125 - 47191044
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    |||||||||||||||||||||||||| || ||||||  |||||||| ||||| |||||  || |||||| ||| |||||||||    
T  47191125 ggaaaatgttacatgaacaccctttattcctacacctcattgtaca-cccatgtattagagatattttgataagttcatctca 47191044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 368
Target Start/End: Complemental strand, 53273784 - 53273702
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    ||||||||||| ||||||| | |||| || || |||  |||||||| ||||| ||||| ||| |||||||||| |||||||||    
T  53273784 ggaaaatgttatatgaacatcatttattcctatacctcattgtacatcccatgtattagggatattttggtaagttcatctca 53273702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 75; Significance: 2e-34; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 286 - 368
Target Start/End: Original strand, 35003294 - 35003376
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  35003294 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatacattaaggatattttggtaaattcatctca 35003376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 286 - 368
Target Start/End: Original strand, 48119628 - 48119710
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||||||||||    
T  48119628 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattaaggatattttggtaaattcatctca 48119710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 286 - 368
Target Start/End: Complemental strand, 38113295 - 38113213
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||    
T  38113295 ggaaaatgttatatgaacaccctttaatcatacaccctattgtacaccccatgcattaatgacattttggtaaattcatctca 38113213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 286 - 368
Target Start/End: Original strand, 44112677 - 44112759
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||  |||| |||||||||||||| |||||||||    
T  44112677 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattttggtaatttcatctca 44112759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 286 - 368
Target Start/End: Complemental strand, 45639832 - 45639750
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    |||||||||||||||||||| ||||||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||    
T  45639832 ggaaaatgttacatgaacactctttaatcatacatcctattgtacaccccatacattaaggatattttggtaaattcatctca 45639750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 286 - 368
Target Start/End: Original strand, 38335918 - 38336000
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| |||||  |||||||| ||||||||||||||||||||    
T  38335918 ggaaaatgttacatgaacaccctttaatcatacaccttattgtacatcccatgcattaaggatattttggtaaattcatctca 38336000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 286 - 368
Target Start/End: Original strand, 41065153 - 41065235
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||  |||| || ||||||||||| |||||||||    
T  41065153 ggaaaatgttacatgaacaccctttaatcatacaccctgttgtacaccccatgcattaggggcattttggtaatttcatctca 41065235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 286 - 368
Target Start/End: Original strand, 46168383 - 46168465
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    |||||||||||||||||||||||||||||||| | |||||||||||||| ||  |||||||| ||||||||||||||||||||    
T  46168383 ggaaaatgttacatgaacaccctttaatcatatatcctattgtacacccaatgcattaaggatattttggtaaattcatctca 46168465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 286 - 368
Target Start/End: Complemental strand, 45427845 - 45427763
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||||| ||||  |||| |||||||||||||| |||||||||    
T  45427845 ggaaaatgttacatgaataccttttaatcatacaccctattgtacactccatgcattagggacattttggtaatttcatctca 45427763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 286 - 364
Target Start/End: Original strand, 37814778 - 37814856
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcat 364  Q
    |||||||||||||| ||||||||||| ||||||| |  |||||||||||||| ||||||||| ||||||||||||||||    
T  37814778 ggaaaatgttacataaacaccctttattcatacatctcattgtacaccccatgtattaaggatattttggtaaattcat 37814856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 286 - 368
Target Start/End: Complemental strand, 43571186 - 43571104
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    |||||||||||||||||||||||||| || ||||||  |||||||||||||| ||||| ||| |||||||||| |||||||||    
T  43571186 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctca 43571104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 286 - 368
Target Start/End: Original strand, 45705825 - 45705907
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    ||||||||||| ||||||||||||||||||||||  ||||||||||| ||||  |||| |||||||||| |||||||||||||    
T  45705825 ggaaaatgttatatgaacaccctttaatcatacattctattgtacactccatgcattatggacattttgataaattcatctca 45705907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 288 - 368
Target Start/End: Complemental strand, 2497660 - 2497580
Alignment:
Q  288 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    |||||||||||| |||||| |||| |||||||  | |||||||||||||||||||||||| |||||||||| |||||||||    
T  2497660 aaaatgttacataaacaccatttattcatacattccattgtacaccccatatattaaggatattttggtaagttcatctca 2497580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 286 - 333
Target Start/End: Original strand, 14427347 - 14427394
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacacc 333  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  14427347 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacacc 14427394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 286 - 368
Target Start/End: Original strand, 5489776 - 5489858
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    |||||||||||||||||||||||||| || |||| || ||||||||||| || ||||| ||| |||||||||| |||||||||    
T  5489776 ggaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctca 5489858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 286 - 368
Target Start/End: Complemental strand, 35000213 - 35000131
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    ||||||||||||||||||||| ||||||||||||| |||||||| ||  ||| ||||| |||||||||| |||||| ||||||    
T  35000213 ggaaaatgttacatgaacaccttttaatcatacactctattgtatacttcatgtattagggacattttgataaatttatctca 35000131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 286 - 367
Target Start/End: Original strand, 26585462 - 26585543
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctc 367  Q
    ||||||||||| |||||||  ||||||||||||||  |||||||||||||||  |||||||| ||||| |||||||||||||    
T  26585462 ggaaaatgttagatgaacattctttaatcatacactatattgtacaccccatgcattaaggatattttagtaaattcatctc 26585543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 286 - 368
Target Start/End: Complemental strand, 23989624 - 23989541
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaat-catacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    ||||||||||||||||||||||||| || ||||||| | |||||| |||| || ||||| ||| ||||||||||||| ||||||    
T  23989624 ggaaaatgttacatgaacacccttttattcatacactcaattgtataccctatgtattagggatattttggtaaatttatctca 23989541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 286 - 368
Target Start/End: Complemental strand, 750405 - 750323
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    |||||||||||| |||||||||||   || ||||||| |||||||||||||| ||| | ||| |||||| |||||||||||||    
T  750405 ggaaaatgttacgtgaacacccttatttcctacaccccattgtacaccccatgtatcagggatattttgataaattcatctca 750323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 286 - 368
Target Start/End: Complemental strand, 48499062 - 48498980
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    |||||||||||||||||||| ||||| |  ||||| | |||||||||| ||| ||||| ||| |||||||||| |||||||||    
T  48499062 ggaaaatgttacatgaacactctttatttctacactccattgtacacctcatgtattagggatattttggtaagttcatctca 48498980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 358
Target Start/End: Complemental strand, 24769599 - 24769527
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaa 358  Q
    |||||||||| |||||||||| |||| |  ||||| | |||||||||||||| ||||| ||| ||||||||||    
T  24769599 ggaaaatgtttcatgaacaccttttatttctacactccattgtacaccccatgtattagggatattttggtaa 24769527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 368
Target Start/End: Original strand, 7447828 - 7447907
Alignment:
Q  288 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    ||||||||||||||||| |||||| || |||| || |||||||| ||||| |||||  || |||||| ||| |||||||||    
T  7447828 aaaatgttacatgaacatcctttattcctacatcccattgtaca-cccatgtattacagatattttgataagttcatctca 7447907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 366
Target Start/End: Complemental strand, 50448360 - 50448280
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatct 366  Q
    |||||||||||||||||||| ||||| |  ||||| | ||||||||||  || ||||| ||| ||||| |||| |||||||    
T  50448360 ggaaaatgttacatgaacactctttatttctacactccattgtacaccttatgtattagggatatttttgtaagttcatct 50448280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 71; Significance: 4e-32; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 286 - 368
Target Start/End: Original strand, 33242403 - 33242485
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    ||||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||    
T  33242403 ggaaaatgttacatgaacaccatttaatcatacaccttattgtacaccccatgtattaaggacattttggtaaattcatctca 33242485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 288 - 368
Target Start/End: Original strand, 27441544 - 27441624
Alignment:
Q  288 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    |||||||||||||||||||||||||||||||||||||||||||| || || ||||||||| ||||||||||||||||||||    
T  27441544 aaaatgttacatgaacaccctttaatcatacaccctattgtacatcctatgtattaaggatattttggtaaattcatctca 27441624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 286 - 368
Target Start/End: Original strand, 33253913 - 33253995
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||||||  |||| |||||| |||||||||||||||||    
T  33253913 ggaaaatgttacatgaacaccatttaatcacacaccctattgtacaccccatgcattagggacatattggtaaattcatctca 33253995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 286 - 364
Target Start/End: Original strand, 3213400 - 3213478
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcat 364  Q
    |||||||||||||| ||||||||||| ||||||| |  |||||||||||||| ||||||||| ||||||||||||||||    
T  3213400 ggaaaatgttacataaacaccctttattcatacatctcattgtacaccccatgtattaaggatattttggtaaattcat 3213478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 286 - 368
Target Start/End: Complemental strand, 7273435 - 7273353
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    |||||||||||||||||||||||||| || |||||| ||||||||||||||| |||||  || |||||||||| |||||||||    
T  7273435 ggaaaatgttacatgaacaccctttattcctacaccttattgtacaccccatgtattagagatattttggtaagttcatctca 7273353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 286 - 368
Target Start/End: Complemental strand, 13743321 - 13743239
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    ||||||||||||||||||||| |||| ||||||| || |||||||||||||| ||||| ||| |||||||||| |||||||||    
T  13743321 ggaaaatgttacatgaacaccttttattcatacatccaattgtacaccccatgtattagggatattttggtaagttcatctca 13743239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 286 - 368
Target Start/End: Complemental strand, 13748821 - 13748739
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    ||||||||||||||||||||| |||| ||||||| || |||||||||||||| ||||| ||| |||||||||| |||||||||    
T  13748821 ggaaaatgttacatgaacaccttttattcatacatccaattgtacaccccatgtattagggatattttggtaagttcatctca 13748739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 288 - 368
Target Start/End: Complemental strand, 24204085 - 24204005
Alignment:
Q  288 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    ||||||||||||||||||| |||| || ||||||||||||||||| |||| ||||| ||| |||||||||| |||||||||    
T  24204085 aaaatgttacatgaacaccatttattcctacaccctattgtacactccatgtattagggatattttggtaagttcatctca 24204005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 286 - 368
Target Start/End: Complemental strand, 9698433 - 9698351
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    |||||||||||||||||||||||||| || |||| || ||||||||||| || ||||| ||| |||||||||| |||||||||    
T  9698433 ggaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctca 9698351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 286 - 368
Target Start/End: Complemental strand, 26670109 - 26670027
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    |||||||||||||||||||||||||| || ||||||  |||||||||| ||| ||||| ||| |||||||||| |||||||||    
T  26670109 ggaaaatgttacatgaacaccctttattcctacacctcattgtacacctcatgtattagggatattttggtaagttcatctca 26670027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 286 - 364
Target Start/End: Complemental strand, 21293777 - 21293699
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcat 364  Q
    |||||||||||||| ||||||||||| |||||||    | |||||||||||| ||||||||| ||||||||||||||||    
T  21293777 ggaaaatgttacataaacaccctttattcatacatttcactgtacaccccatgtattaaggatattttggtaaattcat 21293699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 286 - 368
Target Start/End: Original strand, 26466799 - 26466881
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    |||||||||||||| ||||||||||| || ||||||| ||||||||| |||| ||||| ||  |||||||||| |||||||||    
T  26466799 ggaaaatgttacataaacaccctttattcctacaccccattgtacactccatgtattagggttattttggtaagttcatctca 26466881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 286 - 363
Target Start/End: Complemental strand, 31109322 - 31109245
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattca 363  Q
    |||||||||||||||||||||||||||||||||| || ||| ||||||||||  | || ||| |||||| ||||||||    
T  31109322 ggaaaatgttacatgaacaccctttaatcatacatcccattatacaccccatgcactagggatattttgataaattca 31109245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 286 - 368
Target Start/End: Original strand, 7292747 - 7292829
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    ||||||||||||| ||||||| |||| |||||||||  ||| ||||||| || ||||| ||| |||||||||| |||||||||    
T  7292747 ggaaaatgttacaagaacaccatttattcatacacctcattatacaccctatgtattagggatattttggtaagttcatctca 7292829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 286 - 368
Target Start/End: Original strand, 7367549 - 7367631
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    ||||||||||| ||||||| | |||| |||||||||  |||||||| ||||| ||||| ||| |||||||||| |||||||||    
T  7367549 ggaaaatgttatatgaacatcatttattcatacacctcattgtacatcccatgtattagggatattttggtaagttcatctca 7367631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 286 - 368
Target Start/End: Original strand, 21279929 - 21280011
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    |||||||||||||||||||||||||| |  ||||  | |||| ||| ||||| ||||| ||| ||||||||||||||||||||    
T  21279929 ggaaaatgttacatgaacaccctttatttctacattccattgcacatcccatgtattagggatattttggtaaattcatctca 21280011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 286 - 368
Target Start/End: Original strand, 30014343 - 30014425
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    |||||||||||||||||||||||||| || |||| || ||| |||| ||||| ||||| | | |||||||||| |||||||||    
T  30014343 ggaaaatgttacatgaacaccctttattcctacatcccattatacatcccatgtattaggcatattttggtaagttcatctca 30014425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 288 - 368
Target Start/End: Original strand, 30735984 - 30736064
Alignment:
Q  288 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    ||||||||||||||||||  |||| || ||||||| |||||||||| ||| |||||  || |||||||||| |||||||||    
T  30735984 aaaatgttacatgaacactttttattcctacaccccattgtacacctcatgtattagtgatattttggtaagttcatctca 30736064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 67; Significance: 1e-29; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 286 - 368
Target Start/End: Original strand, 711960 - 712042
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||  |||||||| ||||||||||||||||||||    
T  711960 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccctatgcattaaggatattttggtaaattcatctca 712042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 286 - 368
Target Start/End: Complemental strand, 17619252 - 17619170
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||  |||||||| ||||||||||||||||||||    
T  17619252 ggaaaatgttacatgaacaccttttaatcatacaccctattgtacaccccatgcattaaggatattttggtaaattcatctca 17619170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 286 - 368
Target Start/End: Original strand, 32728357 - 32728439
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||  |||||||||||||| ||||||||||||||    
T  32728357 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacattttagtaaattcatctca 32728439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 286 - 366
Target Start/End: Complemental strand, 960970 - 960890
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatct 366  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||| ||| |||| ||||||||||||||||||||||    
T  960970 ggaaaatgttacatgaacaccctttaatcatacactctattgtacaccctatacattagggacattttggtaaattcatct 960890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 286 - 368
Target Start/End: Complemental strand, 55272476 - 55272394
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||||||||  |||||||| ||||||||||||||||||||    
T  55272476 ggaaaatgttacatgaacatcctttaatcatacactctattgtacaccccatgcattaaggatattttggtaaattcatctca 55272394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 288 - 368
Target Start/End: Complemental strand, 3756344 - 3756264
Alignment:
Q  288 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||||| ||||||| ||||||    
T  3756344 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattaaggatattttagtaaatttatctca 3756264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 288 - 368
Target Start/End: Original strand, 35037007 - 35037087
Alignment:
Q  288 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    |||||||||||||| |||||||||| ||||||| ||||||||||||||||  |||||||| ||||||||||||||||||||    
T  35037007 aaaatgttacatgagcaccctttaaccatacactctattgtacaccccatgcattaaggatattttggtaaattcatctca 35037087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 286 - 368
Target Start/End: Complemental strand, 28982922 - 28982840
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    |||||||||||||||||||||||||| |  |||||||||||||||| ||||||||||| ||| |||||||||| |||||||||    
T  28982922 ggaaaatgttacatgaacaccctttatttctacaccctattgtacatcccatatattagggatattttggtaagttcatctca 28982840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 286 - 368
Target Start/End: Complemental strand, 46827806 - 46827724
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||| ||  |||||| || |||||||||||| ||||||    
T  46827806 ggaaaatgttacatgaacaccctttaatcatacactctattgtacacccaatgcattaagaacgttttggtaaatttatctca 46827724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 286 - 368
Target Start/End: Complemental strand, 48435679 - 48435597
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    ||||| ||||||||||||||| |||||||| |||||||||||||||||||||  |||| |||||| |||||||||||||||||    
T  48435679 ggaaagtgttacatgaacaccatttaatcacacaccctattgtacaccccatgcattagggacatattggtaaattcatctca 48435597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 286 - 369
Target Start/End: Original strand, 28988473 - 28988556
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctcat 369  Q
    |||||||||||||||||||||||||| |||||||||  ||||||||||||||  | || |||||||||| ||||||||||||||    
T  28988473 ggaaaatgttacatgaacaccctttattcatacacctcattgtacaccccatgcactagggacattttgataaattcatctcat 28988556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 286 - 366
Target Start/End: Complemental strand, 49229764 - 49229684
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatct 366  Q
    ||||||||||| ||||||| |||||||||||||||||||||||||||  |||  |||||||| ||| ||||||||||||||    
T  49229764 ggaaaatgttatatgaacatcctttaatcatacaccctattgtacacttcatgcattaaggatattctggtaaattcatct 49229684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 286 - 368
Target Start/End: Complemental strand, 1771366 - 1771284
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    |||||||||||||||||||||||||| || ||||||| |||||||||||||| |||||  || |||||| ||| |||||||||    
T  1771366 ggaaaatgttacatgaacaccctttattcctacaccccattgtacaccccatgtattagagatattttgataagttcatctca 1771284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 286 - 368
Target Start/End: Original strand, 23035980 - 23036062
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    ||||||||||||||||||  |||||| || ||||||||||||||||||| |||||||| ||| ||||| |||| |||||||||    
T  23035980 ggaaaatgttacatgaacctcctttattcctacaccctattgtacaccctatatattagggatatttttgtaagttcatctca 23036062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 286 - 368
Target Start/End: Original strand, 27864564 - 27864646
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    |||||||||||||| |||||| |||| ||||||| || |||||||||||||| ||||| ||| |||||||||| |||||||||    
T  27864564 ggaaaatgttacataaacaccatttattcatacatcccattgtacaccccatgtattagggatattttggtaagttcatctca 27864646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 286 - 368
Target Start/End: Original strand, 33703141 - 33703223
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    |||||||||||||||||||||||||| |  |||| | ||||||||||||||| ||||| ||| |||||||||| |||||||||    
T  33703141 ggaaaatgttacatgaacaccctttatttctacatcttattgtacaccccatgtattagggatattttggtaagttcatctca 33703223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 286 - 368
Target Start/End: Complemental strand, 55966446 - 55966364
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    |||||||||||||| ||||||||||| ||||||| || |||||||| ||||| ||||| ||| |||||||||| |||||||||    
T  55966446 ggaaaatgttacataaacaccctttattcatacatcccattgtacatcccatgtattagggatattttggtaagttcatctca 55966364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 319 - 368
Target Start/End: Original strand, 19879987 - 19880036
Alignment:
Q  319 accctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  19879987 accctattgtacaccccatatattatggacattttggtaaattcatctca 19880036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 288 - 368
Target Start/End: Complemental strand, 27893940 - 27893860
Alignment:
Q  288 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    |||||||||||| |||||| |||| ||||||| || |||||||||||||| ||||| ||| |||||||||| |||||||||    
T  27893940 aaaatgttacataaacaccatttattcatacatcccattgtacaccccatgtattagggatattttggtaatttcatctca 27893860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 286 - 369
Target Start/End: Complemental strand, 27316813 - 27316730
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctcat 369  Q
    ||||||||||| | |||||||||||| || ||||||  ||| |||||||||| ||||||||| |||||||||| ||||||||||    
T  27316813 ggaaaatgttaaacgaacaccctttattcctacacctcattatacaccccatgtattaaggatattttggtaagttcatctcat 27316730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 286 - 368
Target Start/End: Original strand, 25051693 - 25051775
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    ||||||||| |||||||||| ||||| || ||||||| ||||||||||| || ||||| ||| |||||||||| |||||||||    
T  25051693 ggaaaatgtcacatgaacacactttattcctacaccccattgtacaccctatgtattagggatattttggtaagttcatctca 25051775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 286 - 366
Target Start/End: Original strand, 27550309 - 27550389
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatct 366  Q
    |||||||||||||||||||||||||| |  ||||| | |||||||||| ||| ||||| ||| |||||||||| |||||||    
T  27550309 ggaaaatgttacatgaacaccctttatttctacactccattgtacacctcatgtattagggatattttggtaagttcatct 27550389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 288 - 368
Target Start/End: Original strand, 38851515 - 38851595
Alignment:
Q  288 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    ||||||||||||||| | |||||||||||||| | || ||||||| ||||  |||| |||||||||| |||||||||||||    
T  38851515 aaaatgttacatgaatatcctttaatcatacatcataatgtacactccatgcattatggacattttgataaattcatctca 38851595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 287 - 368
Target Start/End: Original strand, 41878407 - 41878488
Alignment:
Q  287 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    ||||||||||||||||||| ||||| |||||||||  ||||||||||| ||  |||| ||| |||||| ||| |||||||||    
T  41878407 gaaaatgttacatgaacactctttattcatacacctcattgtacaccctatccattagggatattttgataagttcatctca 41878488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 286 - 366
Target Start/End: Original strand, 12496956 - 12497036
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatct 366  Q
    ||||||||||| |||||||||||||| || ||||| | |||||||| ||||| |||||  || |||||||||| |||||||    
T  12496956 ggaaaatgttatatgaacaccctttattcctacactccattgtacatcccatgtattagagatattttggtaagttcatct 12497036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 288 - 368
Target Start/End: Original strand, 31680904 - 31680984
Alignment:
Q  288 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    |||||||||| | |||||| |||| |||||||  | |||||||||||| ||||||| ||| |||||||||| |||||||||    
T  31680904 aaaatgttacgtaaacaccatttattcatacattccattgtacaccccgtatattagggatattttggtaagttcatctca 31680984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 288 - 368
Target Start/End: Complemental strand, 41327641 - 41327561
Alignment:
Q  288 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    ||||||||||||  |||||||||| ||| |||||| ||||||||||  ||  | || ||||||||||||||||||||||||    
T  41327641 aaaatgttacatagacaccctttattcacacaccccattgtacaccttatgcactacggacattttggtaaattcatctca 41327561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 288 - 368
Target Start/End: Complemental strand, 43514784 - 43514704
Alignment:
Q  288 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    |||||||||||||||||||||||| || ||||| | |||||||||  ||| ||||| ||  |||||||||| |||||||||    
T  43514784 aaaatgttacatgaacaccctttattcctacactccattgtacacttcatgtattagggttattttggtaagttcatctca 43514704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 286 - 368
Target Start/End: Original strand, 35017733 - 35017814
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    |||||||||||||||||||||||||| || || | |  |||||||||||||| || || ||| |||||||||| |||||||||    
T  35017733 ggaaaatgttacatgaacaccctttattcctatatctcattgtacaccccatgta-tagggatattttggtaagttcatctca 35017814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 286 - 368
Target Start/End: Complemental strand, 45490413 - 45490331
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    ||||||||||||||||||||  |||| | ||||| || |||||||||| ||| ||||| ||| | ||| ||||||||||||||    
T  45490413 ggaaaatgttacatgaacacattttatttatacatccaattgtacacctcatgtattagggatactttagtaaattcatctca 45490331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 286 - 368
Target Start/End: Complemental strand, 48463550 - 48463468
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    |||||||||||||| |||||| |||| |||||||    |||||||| ||||| ||||| ||| |||||||||| |||||||||    
T  48463550 ggaaaatgttacataaacaccatttattcatacatttcattgtacatcccatgtattagggatattttggtaagttcatctca 48463468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 288 - 368
Target Start/End: Complemental strand, 43949900 - 43949819
Alignment:
Q  288 aaaatgttacatgaacaccctttaat-catacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    |||||| |||||||||||||||| || | | ||||  |||||||||||||| ||||| ||| |||||||||| |||||||||    
T  43949900 aaaatgatacatgaacacccttttattcctgcacctcattgtacaccccatgtattagggatattttggtaagttcatctca 43949819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 322
Target Start/End: Complemental strand, 36004204 - 36004168
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccc 322  Q
    ||||||||||||||||| |||||||||||||||||||    
T  36004204 ggaaaatgttacatgaataccctttaatcatacaccc 36004168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 286 - 365
Target Start/End: Original strand, 41847971 - 41848050
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatc 365  Q
    ||||||||||||| ||||| |||||  ||| |||||  ||||||||||||||  ||||  |||||||||| |||||||||    
T  41847971 ggaaaatgttacaagaacatccttttttcacacacctcattgtacaccccatgcattagagacattttggcaaattcatc 41848050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 259
Target Start/End: Original strand, 47209992 - 47210086
Alignment:
Q  165 ttttgtggtggtggtgaggaaagttcttctcacatcttcttgcattgtgatgtggtgtttaaggtttggctaaaggtgttcaggcggcttaattt 259  Q
    |||||||  ||||||||||||| |||| |||| || |||||||||||||| |||||| | ||||  |||  ||||||||||| | |||| |||||    
T  47209992 ttttgtgcaggtggtgaggaaacttctgctcatattttcttgcattgtgaggtggtgatgaaggagtgggaaaaggtgttcatgtggctcaattt 47210086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 328 - 368
Target Start/End: Complemental strand, 36004174 - 36004134
Alignment:
Q  328 tacaccccatatattaaggacattttggtaaattcatctca 368  Q
    |||||||||||||||| |||||||||| |||||| ||||||    
T  36004174 tacaccccatatattagggacattttgataaatttatctca 36004134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 67; Significance: 1e-29; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 286 - 368
Target Start/End: Complemental strand, 966934 - 966852
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| || |||||||||||||||||||    
T  966934 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattaagaacgttttggtaaattcatctca 966852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 286 - 368
Target Start/End: Original strand, 18491705 - 18491787
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||  |||||| ||||||||||||||||||||||    
T  18491705 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacacctcatgcattaagaacattttggtaaattcatctca 18491787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 286 - 368
Target Start/End: Original strand, 43114557 - 43114639
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||  |||| |||||||||||||| |||||||||    
T  43114557 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattttggtaatttcatctca 43114639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 288 - 368
Target Start/End: Complemental strand, 11825752 - 11825672
Alignment:
Q  288 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  |||| |||||||||||||| |||||||||    
T  11825752 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattttggtaatttcatctca 11825672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 288 - 368
Target Start/End: Complemental strand, 4299518 - 4299438
Alignment:
Q  288 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||  ||||| |||||||||||||||||||||||    
T  4299518 aaaatgttatatgaacaccctttaatcatacaccctattgtacactccatgcattaatgacattttggtaaattcatctca 4299438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 288 - 368
Target Start/End: Complemental strand, 41282072 - 41281992
Alignment:
Q  288 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  |||| |||||||||| ||| |||||||||    
T  41282072 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattttgataatttcatctca 41281992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 286 - 368
Target Start/End: Complemental strand, 12415560 - 12415478
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||  |||| |||||||||||||| || ||||||    
T  12415560 ggaaaatgttacatgaacaccctttaatcatacaccttattgtacaccccatgcattagggacattttggtaattttatctca 12415478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 286 - 368
Target Start/End: Complemental strand, 12427620 - 12427538
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||  |||| |||||||||||||| || ||||||    
T  12427620 ggaaaatgttacatgaacaccctttaatcatacaccttattgtacaccccatgcattagggacattttggtaattttatctca 12427538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 286 - 368
Target Start/End: Original strand, 14285676 - 14285758
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    ||||||| |||||  |||||||||||||||||||||||||||||||||| ||||||||| || ||||||||||||||||||||    
T  14285676 ggaaaatattacacaaacaccctttaatcatacaccctattgtacaccctatatattaaagatattttggtaaattcatctca 14285758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 286 - 368
Target Start/End: Original strand, 16803968 - 16804050
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||  |||| |||||||||| ||| |||||||||    
T  16803968 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacatcccatgcattagggacattttgataatttcatctca 16804050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 286 - 368
Target Start/End: Original strand, 16843250 - 16843332
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||  |||| |||||||||| ||| |||||||||    
T  16843250 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacatcccatgcattagggacattttgataatttcatctca 16843332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 286 - 368
Target Start/End: Complemental strand, 34895841 - 34895759
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    ||||| ||||||||||||||| |||||||| |||||||||||||||||||||  |||| |||||| |||||||||||||||||    
T  34895841 ggaaagtgttacatgaacaccatttaatcacacaccctattgtacaccccatgcattagggacatattggtaaattcatctca 34895759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 288 - 368
Target Start/End: Complemental strand, 6518566 - 6518487
Alignment:
Q  288 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||||  |||| |||||||||||||| |||||||||    
T  6518566 aaaatgttacatgaacacc-tttaatcatacactctattgtacaccccatgcattagggacattttggtaatttcatctca 6518487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 286 - 368
Target Start/End: Original strand, 1750414 - 1750496
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    |||||||||||||||||||||||||| || ||||||| ||||||||||| || ||||| ||| ||||| |||| |||||||||    
T  1750414 ggaaaatgttacatgaacaccctttattcctacaccccattgtacaccctatgtattagggatatttttgtaagttcatctca 1750496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 286 - 368
Target Start/End: Complemental strand, 4764826 - 4764744
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    |||||||||||||| |||||| |||| || |||||||||||||||||||||| |||||   | ||||||||||||||||||||    
T  4764826 ggaaaatgttacatcaacaccatttattcctacaccctattgtacaccccatgtattataaatattttggtaaattcatctca 4764744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 286 - 368
Target Start/End: Original strand, 30838632 - 30838714
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    |||||||||||||||||||||||||| |  |||| | ||||||||||||||| ||||| ||| |||||||||| |||||||||    
T  30838632 ggaaaatgttacatgaacaccctttatttctacatcttattgtacaccccatgtattagggatattttggtaagttcatctca 30838714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 287 - 368
Target Start/End: Complemental strand, 34817875 - 34817794
Alignment:
Q  287 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    ||||||||||||||||||||||||| ||| |||||  ||||||||||||||  | || | ||||||||||||||||||||||    
T  34817875 gaaaatgttacatgaacaccctttattcacacacctcattgtacaccccatgcactacgcacattttggtaaattcatctca 34817794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 286 - 368
Target Start/End: Complemental strand, 12302353 - 12302271
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    |||||||||||||||||||||||||| |  ||||||| ||||||||||| || ||||| ||| ||||| |||| |||||||||    
T  12302353 ggaaaatgttacatgaacaccctttatttctacaccccattgtacaccctatgtattagggatatttttgtaagttcatctca 12302271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 286 - 356
Target Start/End: Original strand, 16096747 - 16096817
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggt 356  Q
    |||||||||||||||||||||||||| || ||||||| ||| |||||||||| ||||| ||| ||||||||    
T  16096747 ggaaaatgttacatgaacaccctttattcctacaccccattatacaccccatgtattagggatattttggt 16096817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 287 - 368
Target Start/End: Original strand, 19047158 - 19047239
Alignment:
Q  287 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    ||||||||||||||||||||||||| || ||||  | ||||||||||| || ||||| ||| |||||||||| |||||||||    
T  19047158 gaaaatgttacatgaacaccctttattcctacattccattgtacaccctatgtattagggatattttggtaagttcatctca 19047239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 288 - 369
Target Start/End: Complemental strand, 43490499 - 43490418
Alignment:
Q  288 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctcat 369  Q
    |||||||||||||||||||||||| || |||| || ||||||||| | || ||||| ||| |||||||||| ||||||||||    
T  43490499 aaaatgttacatgaacaccctttattcctacatcccattgtacactctatgtattagggatattttggtaagttcatctcat 43490418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 288 - 366
Target Start/End: Original strand, 7070418 - 7070496
Alignment:
Q  288 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatct 366  Q
    |||||||||||||||||||||||| ||||||| || ||||||  | |||| ||||  |||||||||| |||||||||||    
T  7070418 aaaatgttacatgaacaccctttattcatacatcccattgtaacctccatttattggggacattttgataaattcatct 7070496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 286 - 368
Target Start/End: Complemental strand, 13780835 - 13780753
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    |||||||||||||| |||||  |||| ||| |||||  ||||||||||||||| |||| ||| |||||| |||||||||||||    
T  13780835 ggaaaatgttacatcaacacattttattcacacacctcattgtacaccccatacattagggatattttgataaattcatctca 13780753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 288 - 368
Target Start/End: Complemental strand, 8896681 - 8896601
Alignment:
Q  288 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    |||||||||||||||||||||||| ||| |||  | ||||||||||| ||| | || | | ||||||||||||||||||||    
T  8896681 aaaatgttacatgaacaccctttattcacacattccattgtacaccctatacaataggaatattttggtaaattcatctca 8896601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 288 - 365
Target Start/End: Original strand, 33229303 - 33229381
Alignment:
Q  288 aaaatgttacatgaacaccctttaat-catacaccctattgtacaccccatatattaaggacattttggtaaattcatc 365  Q
    |||||| |||||||||||||||| || | ||||||  |||||||||||||| ||||| ||| |||||||||| ||||||    
T  33229303 aaaatgatacatgaacacccttttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatc 33229381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 286 - 368
Target Start/End: Complemental strand, 43335863 - 43335781
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    ||||||||||| ||||||| | |||| || ||||||  |||||||| ||||| ||||| ||| |||||||||| |||||||||    
T  43335863 ggaaaatgttatatgaacatcatttattcctacacctcattgtacatcccatgtattagggatattttggtaagttcatctca 43335781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 322
Target Start/End: Complemental strand, 42849946 - 42849910
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccc 322  Q
    |||||||||||||||||||||||||| || |||||||    
T  42849946 ggaaaatgttacatgaacaccctttattcctacaccc 42849910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 288 - 368
Target Start/End: Complemental strand, 45817 - 45737
Alignment:
Q  288 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    |||||||||||||||||||||||||||||||||||||||||||| || || ||||||||| ||||||||||||||||||||    
T  45817 aaaatgttacatgaacaccctttaatcatacaccctattgtacatcctatgtattaaggatattttggtaaattcatctca 45737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 63; Significance: 3e-27; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 286 - 368
Target Start/End: Original strand, 31513287 - 31513369
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    |||||||||||||||||||| ||||||||||||||||||||||| |||||||  |||||||| ||||||||||||||||||||    
T  31513287 ggaaaatgttacatgaacactctttaatcatacaccctattgtataccccatgcattaaggatattttggtaaattcatctca 31513369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 286 - 368
Target Start/End: Original strand, 40236919 - 40237001
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||  |||| |||||||||||||| |||||||||    
T  40236919 ggaaaatgttacatgaacaccctttaatcatacatcctattgtacaccccatgcattagggacattttggtaatttcatctca 40237001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 286 - 368
Target Start/End: Complemental strand, 27535331 - 27535249
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||| |||| | |||| ||||||||||||| |||||||||    
T  27535331 ggaaaatgttacatgaacaccctttaatcatacactctattgtacactccatgtgttaaagacattttggtaatttcatctca 27535249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 287 - 364
Target Start/End: Complemental strand, 31408732 - 31408655
Alignment:
Q  287 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcat 364  Q
    |||||||||||||||||||||||||||||||||| |||||||||| |||||  |||||||| ||||||||||||||||    
T  31408732 gaaaatgttacatgaacaccctttaatcatacactctattgtacatcccatgcattaaggatattttggtaaattcat 31408655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 288 - 368
Target Start/End: Complemental strand, 4638297 - 4638217
Alignment:
Q  288 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    ||||||||||||||||||| |||| |||||||| | |||||||||||||||||||| ||| |||||||||| |||||||||    
T  4638297 aaaatgttacatgaacaccttttattcatacactcaattgtacaccccatatattatggatattttggtaagttcatctca 4638217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 288 - 368
Target Start/End: Original strand, 10573751 - 10573831
Alignment:
Q  288 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    |||||||||||| ||||||||||| ||||||| ||||||||||||||||| ||||| | | ||||||||||||||||||||    
T  10573751 aaaatgttacataaacaccctttattcatacatcctattgtacaccccatgtattaggaatattttggtaaattcatctca 10573831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 288 - 368
Target Start/End: Original strand, 44326180 - 44326260
Alignment:
Q  288 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    |||||||||||| ||||||||||| ||||||| || |||||||||| ||||||||| ||| |||||||||| |||||||||    
T  44326180 aaaatgttacataaacaccctttattcatacatcccattgtacacctcatatattagggatattttggtaagttcatctca 44326260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 286 - 368
Target Start/End: Original strand, 33384870 - 33384953
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcataca-ccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    ||||||||||||||||||| | |||||||||||| |||||||||| || ||||  |||| ||||||||||||||||||||||||    
T  33384870 ggaaaatgttacatgaacatcatttaatcatacacccctattgtatactccatgcattagggacattttggtaaattcatctca 33384953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 286 - 368
Target Start/End: Complemental strand, 5194331 - 5194249
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    ||||||||||||||||||||| |||| |||||||||  ||||||||||| || | ||||||| |||||| |||||||||||||    
T  5194331 ggaaaatgttacatgaacaccatttattcatacacctcattgtacaccctatgttttaaggatattttgataaattcatctca 5194249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 286 - 368
Target Start/End: Complemental strand, 5811024 - 5810942
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    |||||||||||||||| ||||||||| || ||||||| ||||||||||| |||||||| ||| |||||| ||| |||||||||    
T  5811024 ggaaaatgttacatgaccaccctttattcctacaccccattgtacaccctatatattagggatattttgataagttcatctca 5810942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 286 - 368
Target Start/End: Complemental strand, 24001112 - 24001030
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    |||||||||||||||||||||||||| || |||| || ||||||||||| || ||||| ||| |||||||||| |||||||||    
T  24001112 ggaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctca 24001030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 286 - 368
Target Start/End: Complemental strand, 42538531 - 42538449
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    |||||||||||||||||||||||||| || |||| || ||||||||||| || ||||| ||| |||||||||| |||||||||    
T  42538531 ggaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctca 42538449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 105 - 205
Target Start/End: Original strand, 25663952 - 25664052
Alignment:
Q  105 acaaagattaatttctcaaggagaaatgtcttaacaccgggtgcttcttagaattgtgcttttt---gtggtggtggtgaggaaagttcttctcacatct 201  Q
    ||||||| ||||||  |||||||||||||||||   |||  |||||||| ||||||||||||||   ||||||||||||||||||||||||||||  |||    
T  25663952 acaaagactaatttgacaaggagaaatgtctta---ccgcatgcttctttgaattgtgctttttgtggtggtggtggtgaggaaagttcttctcatgtct 25664048  T
Q  202 tctt 205  Q
    ||||    
T  25664049 tctt 25664052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 286 - 353
Target Start/End: Original strand, 39998408 - 39998475
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacatttt 353  Q
    ||||||||||||||||||||  |||||||||||| ||||||||||||||||| ||||| ||| |||||    
T  39998408 ggaaaatgttacatgaacacattttaatcatacatcctattgtacaccccatgtattagggatatttt 39998475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 286 - 368
Target Start/End: Original strand, 35069721 - 35069803
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    |||||||||||||||||||| ||||| || ||||||  |||||||||| ||| ||||| ||| |||||||||| |||||||||    
T  35069721 ggaaaatgttacatgaacactctttattcctacacctcattgtacacctcatgtattagggatattttggtaagttcatctca 35069803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 286 - 368
Target Start/End: Original strand, 45326020 - 45326102
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    ||||| |||||||| |||||| |||| ||||||| |  |||||||||||||||||||| ||| |||||||||| |||||||||    
T  45326020 ggaaagtgttacataaacaccttttattcatacatcacattgtacaccccatatattagggatattttggtaagttcatctca 45326102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 289 - 366
Target Start/End: Complemental strand, 26898499 - 26898422
Alignment:
Q  289 aaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatct 366  Q
    |||||||||||||||||| |||| |||||||||| ||||||||  |||| ||||| ||| |||||||||| |||||||    
T  26898499 aaatgttacatgaacaccttttattcatacacccaattgtacattccatgtattagggatattttggtaagttcatct 26898422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 288 - 368
Target Start/End: Complemental strand, 43343722 - 43343642
Alignment:
Q  288 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    ||||||||||||||||| | |||| |  |||||||||||||||||||||| ||||| ||| |||||| ||| |||||||||    
T  43343722 aaaatgttacatgaacatcatttatttctacaccctattgtacaccccatgtattagggatattttgataagttcatctca 43343642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 288 - 368
Target Start/End: Complemental strand, 44417032 - 44416952
Alignment:
Q  288 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    ||||||||||||||||| | |||| |  |||||||||||||||||||||| ||||| ||| |||||| ||| |||||||||    
T  44417032 aaaatgttacatgaacatcatttatttctacaccctattgtacaccccatgtattagggatattttgataagttcatctca 44416952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 286 - 368
Target Start/End: Original strand, 5015395 - 5015477
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    |||||||||||||||||||| ||||| |  ||||| | |||||||||| ||| ||||| ||| |||||||||| |||||||||    
T  5015395 ggaaaatgttacatgaacactctttatttctacactccattgtacacctcatgtattagggatattttggtaagttcatctca 5015477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 286 - 368
Target Start/End: Complemental strand, 24280696 - 24280614
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    |||||||||||| ||||||||||||| |||||||||||||| |||| |||||  | ||   | ||||||||||||||||||||    
T  24280696 ggaaaatgttacgtgaacaccctttattcatacaccctattctacatcccatgcactagaaatattttggtaaattcatctca 24280614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 286 - 368
Target Start/End: Original strand, 42972852 - 42972934
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    |||||||||||| |||||| |||||| || ||||| | |||||||||| ||| ||||| ||| |||||||||| |||||||||    
T  42972852 ggaaaatgttacctgaacatcctttattcctacactccattgtacacctcatgtattagggatattttggtaagttcatctca 42972934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 343
Target Start/End: Original strand, 41861674 - 41861731
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatatta 343  Q
    |||||||||||||||||||||||||| |||||||||| ||| ||||||| || |||||    
T  41861674 ggaaaatgttacatgaacaccctttattcatacacccaattatacaccctatgtatta 41861731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 295 - 366
Target Start/End: Complemental strand, 32029908 - 32029837
Alignment:
Q  295 tacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatct 366  Q
    ||||| |||||  |||| || ||||||| |||||||||||||| ||||| ||| ||||||||||||||||||    
T  32029908 tacataaacactttttattcctacaccccattgtacaccccatgtattagggatattttggtaaattcatct 32029837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 286 - 368
Target Start/End: Original strand, 9216302 - 9216383
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    |||||||||||||||||||||||||| || || | ||||||||||| |||||  ||||  || |||||||||| |||||||||    
T  9216302 ggaaaatgttacatgaacaccctttattcctatatcctattgtaca-cccatgcattagagatattttggtaagttcatctca 9216383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 286 - 368
Target Start/End: Original strand, 43317443 - 43317525
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    ||||||||||||||||||||| |||| |||||||||  |||||||| || ||   ||| ||| |||||| |||||||||||||    
T  43317443 ggaaaatgttacatgaacaccatttattcatacacctcattgtacatcctatgctttagggatattttgataaattcatctca 43317525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 368
Target Start/End: Complemental strand, 16180454 - 16180375
Alignment:
Q  288 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    |||||||||||| |||||| |||| || ||||||| |||||||||||||  |||||   | ||||||||||||||||||||    
T  16180454 aaaatgttacatcaacaccatttattcctacaccc-attgtacaccccacgtattataaatattttggtaaattcatctca 16180375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 63; Significance: 3e-27; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 286 - 368
Target Start/End: Original strand, 17208074 - 17208156
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    |||||||||||| ||||||||||||||||||||||  |||||||||||||||  |||||||||||||||||||||||||||||    
T  17208074 ggaaaatgttacgtgaacaccctttaatcatacactttattgtacaccccatgcattaaggacattttggtaaattcatctca 17208156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 286 - 368
Target Start/End: Complemental strand, 32473494 - 32473412
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| |||  |||| ||| |||||||||| |||||||||    
T  32473494 ggaaaatgttacatgaacaccctttaatcatacaccttattgtacaccacatgcattagggatattttggtaatttcatctca 32473412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 286 - 368
Target Start/End: Original strand, 7617133 - 7617215
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    |||||||||||||||||||||||||| |||||||| | ||| |||||||||| ||||| ||| |||||||||| |||||||||    
T  7617133 ggaaaatgttacatgaacaccctttattcatacactccattatacaccccatgtattagggatattttggtaagttcatctca 7617215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 286 - 368
Target Start/End: Complemental strand, 30622818 - 30622737
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    ||||||||||||||||||| |||||||||||||||||||||||| | |||||  |||||||| ||||||||||||| ||||||    
T  30622818 ggaaaatgttacatgaacatcctttaatcatacaccctattgta-agcccatgcattaaggatattttggtaaatttatctca 30622737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 286 - 364
Target Start/End: Original strand, 38470579 - 38470657
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcat 364  Q
    |||||||||||||| ||||||||||| |||||||  | |||||||||||||| ||||||||| ||||||||||||||||    
T  38470579 ggaaaatgttacataaacaccctttattcatacattccattgtacaccccatgtattaaggatattttggtaaattcat 38470657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 286 - 358
Target Start/End: Complemental strand, 33855143 - 33855071
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaa 358  Q
    |||||||||||||||||||||||||| || ||||||| |||||||||||||| ||||| | ||||||||||||    
T  33855143 ggaaaatgttacatgaacaccctttattcctacaccccattgtacaccccatgtattaggaacattttggtaa 33855071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 286 - 368
Target Start/End: Complemental strand, 2614749 - 2614667
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    |||||||||||||||||||||||||| || |||| || ||||||||||| || ||||| ||| |||||||||| |||||||||    
T  2614749 ggaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctca 2614667  T

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Target: chr5; HSP #8
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 286 - 368
Target Start/End: Original strand, 22512305 - 22512387
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    |||||||||||||||||||||||||| || ||||| | ||||||||| |||| ||||| ||| |||||||||| |||||||||    
T  22512305 ggaaaatgttacatgaacaccctttattcctacactccattgtacactccatgtattagggatattttggtaagttcatctca 22512387  T

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Target: chr5; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 286 - 368
Target Start/End: Complemental strand, 41334763 - 41334681
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    |||||||||||||||||||||||||| |||||||||  ||| ||||||| || ||||| ||| |||||||||| |||||||||    
T  41334763 ggaaaatgttacatgaacaccctttattcatacacctcattatacaccctatgtattagggatattttggtaagttcatctca 41334681  T

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Target: chr5; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 288 - 368
Target Start/End: Original strand, 5256997 - 5257077
Alignment:
Q  288 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    |||||||||||| |||||| |||| ||||||| || |||||||||||||| ||||| ||| |||||||||| |||||||||    
T  5256997 aaaatgttacataaacaccatttattcatacatcccattgtacaccccatgtattagggatattttggtaatttcatctca 5257077  T

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Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 286 - 368
Target Start/End: Original strand, 18033982 - 18034064
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    |||||||||||||||||||||||||| || ||||| | ||||||||||| || ||||| ||| ||||| |||| |||||||||    
T  18033982 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccctatgtattagggatatttttgtaagttcatctca 18034064  T

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Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 286 - 368
Target Start/End: Original strand, 33801469 - 33801551
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    ||||||||||||||||||| |||||| |  ||||||| ||||||||| |||| ||||| ||| ||||| |||| |||||||||    
T  33801469 ggaaaatgttacatgaacatcctttatttctacaccccattgtacactccatgtattagggatattttagtaagttcatctca 33801551  T

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Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 288 - 343
Target Start/End: Complemental strand, 25915085 - 25915030
Alignment:
Q  288 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatatta 343  Q
    |||||||||||||||||||||||| || ||||||  ||||||||||| || |||||    
T  25915085 aaaatgttacatgaacaccctttattcctacacctcattgtacacccaatgtatta 25915030  T

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Target: scaffold0385 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 286 - 368
Target Start/End: Original strand, 11251 - 11333
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    ||||||||| |||||||||| ||||| |||||||||| |||||||||||||||||||| ||| |||||||||| |||||||||    
T  11251 ggaaaatgtcacatgaacacactttattcatacaccccattgtacaccccatatattagggatattttggtaagttcatctca 11333  T

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Target: scaffold0100 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 286 - 368
Target Start/End: Complemental strand, 35556 - 35474
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    |||||||||||||| |||||| |||||||||||||| |||||||||||||||  |||| |||||| |||||||||||||||||    
T  35556 ggaaaatgttacataaacaccatttaatcatacaccatattgtacaccccatgcattagggacatattggtaaattcatctca 35474  T

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Target: scaffold0119 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 286 - 368
Target Start/End: Original strand, 685 - 767
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    |||||||||||||||||||||||||| || ||||||  |||||||||| ||| ||||| ||| |||||||||| |||||||||    
T  685 ggaaaatgttacatgaacaccctttattcctacacctcattgtacacctcatgtattagggatattttggtaagttcatctca 767  T

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Target: scaffold0038 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 287 - 368
Target Start/End: Original strand, 112656 - 112737
Alignment:
Q  287 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    ||||||||||||||||||||||||| || ||||  | ||||||||||| || ||||| ||| |||||||||| |||||||||    
T  112656 gaaaatgttacatgaacaccctttattcctacattccattgtacaccctatgtattagggatattttggtaagttcatctca 112737  T

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Target: scaffold0187 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 286 - 368
Target Start/End: Complemental strand, 14288 - 14206
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    |||||||||||||||||||||||||| |  ||||||| |||||||| || || ||||| ||| ||||| |||| |||||||||    
T  14288 ggaaaatgttacatgaacaccctttatttctacaccccattgtacatcctatgtattagggatatttttgtaagttcatctca 14206  T

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Target: scaffold0187; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 286 - 368
Target Start/End: Complemental strand, 24616 - 24534
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatctca 368  Q
    |||||||||||||||||||||||||| |  ||||||| |||||||| || || ||||| ||| ||||| |||| |||||||||    
T  24616 ggaaaatgttacatgaacaccctttatttctacaccccattgtacatcctatgtattagggatatttttgtaagttcatctca 24534  T

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Target: scaffold0157 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 286 - 366
Target Start/End: Complemental strand, 23521 - 23441
Alignment:
Q  286 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatatattaaggacattttggtaaattcatct 366  Q
    ||||||||||| |||||||||||||| || ||||| | |||||||| ||||| |||||  || |||||||||| |||||||    
T  23521 ggaaaatgttatatgaacaccctttattcctacactccattgtacatcccatgtattagagatattttggtaagttcatct 23441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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