View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11714_high_22 (Length: 359)
Name: NF11714_high_22
Description: NF11714
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11714_high_22 |
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Alignment Details
Target: chr6 (Bit Score: 293; Significance: 1e-164; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 293; E-Value: 1e-164
Query Start/End: Original strand, 9 - 342
Target Start/End: Original strand, 718719 - 719062
Alignment:
| Q |
9 |
aatgagatgtccatatttcgaactctacatcactatatattacaatgtattgtctctaccaacttaatatttgtttgaagtataaaattggtaagaacca |
108 |
Q |
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| T |
718719 |
aatgagatgtccatatttcgaactctacatcactacatattataatgtattgtctctaccaacttaatatttgtttgaagtataaaattggtaagaacca |
718818 |
T |
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| Q |
109 |
caaagtgaaatatatcatgtaggtttgaaattttccttattcatacgac----------tcctacggcataacatatatttgtttgtttgaggtagaata |
198 |
Q |
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| T |
718819 |
caaagtgaaatatatcatgtaggtttgaaattttccttattcatacgacagatttagtttcctacggcataacatatatctgtttgtttgaggtagaata |
718918 |
T |
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| Q |
199 |
agtagtcatttcataaaatatatctttgattaagttccaaaaaagtttacttaataaaaattacttgaattagtcttgagcagttgaacatagttaatat |
298 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
718919 |
agtagtcatttcataaaatatatctttgattaagttccaaaaaagtttacttattaaaaattacttgaattagtcttgagcagttgaacatagttaatat |
719018 |
T |
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| Q |
299 |
tttcttattccagtggtcgatttattattcctacttcttttgat |
342 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| |
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| T |
719019 |
tttcttattccagtggtcgatttattattcctacttcttttgat |
719062 |
T |
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