View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11714_low_37 (Length: 293)
Name: NF11714_low_37
Description: NF11714
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11714_low_37 |
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Alignment Details
Target: chr2 (Bit Score: 255; Significance: 1e-142; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 1 - 288
Target Start/End: Original strand, 1814226 - 1814515
Alignment:
| Q |
1 |
gtccacaagttaagattaaaccaaataaacttgtatattgaaatgaatttgtgtaatgaaactaaagtcactagacttgaagatccacataatattctaa |
100 |
Q |
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||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1814226 |
gtccacaagttaagattaaactatataaacttgtatattgaaatgaatttgtgtaatgaaactaaagtcactagacttgaagatccacataatattctaa |
1814325 |
T |
|
| Q |
101 |
tgattccattgatattagtgttgatatccggtcttaatccagtaccaa--tacatatagtcagatcacgtgttaatagttagggtgcattataagtaggg |
198 |
Q |
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||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
1814326 |
tgattccattgatattagtgttgatctccggtcttaatccagtaccaatctacatatagtcagatcacgtgttaatagttagggtgcattataaataggg |
1814425 |
T |
|
| Q |
199 |
attgaaagttaagtggccactcatagtcttcattgatggatacaacgttggcaaaacgatgttcatttccatgtctacaatctgtgctcc |
288 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| |
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| T |
1814426 |
attgaaagttaagtggccactcatagtcttcattgatggatacaacgttggcgaaacgatgttcatttccatgtctacaatctgttctcc |
1814515 |
T |
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