View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11714_low_44 (Length: 248)

Name: NF11714_low_44
Description: NF11714
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11714_low_44
NF11714_low_44
[»] chr1 (49 HSPs)
chr1 (98-248)||(41326327-41326477)
chr1 (17-97)||(33706547-33706627)
chr1 (17-97)||(31032053-31032133)
chr1 (17-98)||(7154839-7154920)
chr1 (34-97)||(44510431-44510494)
chr1 (17-84)||(10772554-10772621)
chr1 (17-76)||(30838840-30838899)
chr1 (17-84)||(48127589-48127656)
chr1 (17-95)||(14535353-14535431)
chr1 (17-95)||(35956294-35956371)
chr1 (20-97)||(21097373-21097449)
chr1 (19-84)||(31029905-31029970)
chr1 (17-96)||(30301000-30301076)
chr1 (17-76)||(33704424-33704483)
chr1 (17-76)||(36307673-36307732)
chr1 (24-98)||(36732471-36732544)
chr1 (20-95)||(7557504-7557578)
chr1 (18-89)||(23264131-23264201)
chr1 (17-80)||(24780885-24780948)
chr1 (17-76)||(44512521-44512580)
chr1 (17-97)||(30837762-30837839)
chr1 (17-59)||(35954182-35954224)
chr1 (17-90)||(29522047-29522119)
chr1 (17-58)||(46118145-46118186)
chr1 (17-85)||(7152728-7152795)
chr1 (17-97)||(33004463-33004542)
chr1 (17-97)||(52407370-52407448)
chr1 (17-76)||(7556116-7556174)
chr1 (17-96)||(29647541-29647619)
chr1 (17-95)||(12769614-12769691)
chr1 (17-59)||(25657772-25657814)
chr1 (18-96)||(44299066-44299143)
chr1 (17-58)||(9132893-9132934)
chr1 (17-54)||(30303080-30303117)
chr1 (17-53)||(21096684-21096720)
chr1 (17-96)||(5328844-5328922)
chr1 (18-97)||(11757143-11757221)
chr1 (17-76)||(25655686-25655744)
chr1 (20-99)||(44110206-44110284)
chr1 (30-97)||(46464550-46464616)
chr1 (18-76)||(4640372-4640429)
chr1 (18-88)||(43846213-43846282)
chr1 (20-58)||(52404509-52404547)
chr1 (18-97)||(43847730-43847807)
chr1 (20-53)||(51086617-51086650)
chr1 (18-97)||(4638151-4638227)
chr1 (17-49)||(14488922-14488954)
chr1 (18-58)||(29651054-29651094)
chr1 (20-76)||(35954246-35954301)
[»] chr8 (69 HSPs)
chr8 (98-248)||(42312543-42312693)
chr8 (17-95)||(4621484-4621562)
chr8 (17-97)||(16097602-16097682)
chr8 (17-97)||(41182400-41182480)
chr8 (17-99)||(18957394-18957476)
chr8 (17-97)||(278721-278801)
chr8 (17-97)||(637051-637131)
chr8 (17-97)||(822854-822934)
chr8 (17-97)||(3703168-3703248)
chr8 (17-97)||(23345171-23345251)
chr8 (17-97)||(26965364-26965444)
chr8 (17-100)||(38059240-38059323)
chr8 (17-95)||(15881233-15881311)
chr8 (20-97)||(17946583-17946660)
chr8 (17-97)||(2081366-2081446)
chr8 (17-95)||(30475974-30476052)
chr8 (21-98)||(17852388-17852465)
chr8 (17-97)||(39859937-39860016)
chr8 (17-95)||(38576588-38576665)
chr8 (17-78)||(38060905-38060966)
chr8 (17-85)||(4622883-4622951)
chr8 (17-97)||(40302414-40302493)
chr8 (17-101)||(45407239-45407322)
chr8 (17-95)||(6096821-6096898)
chr8 (17-98)||(40618485-40618565)
chr8 (17-76)||(25583745-25583804)
chr8 (17-76)||(27911902-27911961)
chr8 (17-76)||(27958321-27958380)
chr8 (18-97)||(39070298-39070376)
chr8 (18-98)||(35019234-35019313)
chr8 (17-76)||(17853415-17853474)
chr8 (24-95)||(38099260-38099331)
chr8 (20-85)||(276589-276654)
chr8 (20-85)||(639195-639260)
chr8 (20-85)||(825001-825066)
chr8 (20-89)||(44255961-44256030)
chr8 (17-85)||(17948637-17948705)
chr8 (17-76)||(39857878-39857937)
chr8 (17-76)||(45409283-45409341)
chr8 (19-76)||(15883558-15883615)
chr8 (17-70)||(18955120-18955173)
chr8 (17-58)||(40304541-40304582)
chr8 (21-97)||(30112174-30112249)
chr8 (17-97)||(42647294-42647373)
chr8 (18-93)||(15825071-15825145)
chr8 (18-89)||(26951285-26951354)
chr8 (17-92)||(28084755-28084828)
chr8 (24-95)||(41546845-41546915)
chr8 (18-89)||(41671476-41671546)
chr8 (16-58)||(30556818-30556860)
chr8 (17-58)||(3705264-3705305)
chr8 (17-58)||(13141437-13141478)
chr8 (17-58)||(16095805-16095846)
chr8 (17-74)||(38577185-38577241)
chr8 (17-58)||(44258045-44258086)
chr8 (17-69)||(2082413-2082465)
chr8 (20-76)||(3846520-3846575)
chr8 (18-90)||(15825910-15825981)
chr8 (20-80)||(41544853-41544912)
chr8 (20-59)||(5588103-5588142)
chr8 (18-89)||(23627511-23627581)
chr8 (18-97)||(29725488-29725566)
chr8 (17-48)||(36193405-36193436)
chr8 (24-59)||(42737523-42737558)
chr8 (19-69)||(3852017-3852066)
chr8 (20-58)||(42734679-42734717)
chr8 (17-51)||(43695309-43695343)
chr8 (17-58)||(13139358-13139399)
chr8 (18-59)||(31643020-31643061)
[»] chr6 (27 HSPs)
chr6 (98-248)||(20909429-20909579)
chr6 (98-248)||(20923877-20924027)
chr6 (17-97)||(14105928-14106008)
chr6 (17-98)||(16922238-16922319)
chr6 (17-98)||(17557571-17557652)
chr6 (98-248)||(27445416-27445567)
chr6 (17-101)||(23582203-23582287)
chr6 (17-99)||(27784415-27784497)
chr6 (20-97)||(4587861-4587938)
chr6 (17-95)||(953654-953732)
chr6 (17-76)||(11837779-11837838)
chr6 (17-76)||(23580099-23580158)
chr6 (17-76)||(27782280-27782339)
chr6 (20-96)||(5686338-5686413)
chr6 (17-76)||(11154815-11154874)
chr6 (17-76)||(14103805-14103864)
chr6 (17-76)||(17551009-17551068)
chr6 (17-94)||(28580949-28581025)
chr6 (16-76)||(27438226-27438286)
chr6 (17-76)||(4590003-4590062)
chr6 (17-76)||(24083012-24083070)
chr6 (18-102)||(13866009-13866090)
chr6 (20-76)||(25109367-25109422)
chr6 (17-85)||(28578430-28578497)
chr6 (17-48)||(15287504-15287535)
chr6 (20-58)||(955780-955818)
chr6 (17-47)||(24084557-24084587)
[»] scaffold0003 (3 HSPs)
scaffold0003 (98-248)||(35121-35272)
scaffold0003 (98-248)||(41791-41942)
scaffold0003 (16-76)||(49076-49136)
[»] chr5 (48 HSPs)
chr5 (17-98)||(39590706-39590787)
chr5 (17-97)||(744072-744152)
chr5 (17-97)||(27018122-27018202)
chr5 (17-99)||(822816-822898)
chr5 (17-99)||(20544187-20544269)
chr5 (17-95)||(37938494-37938572)
chr5 (17-98)||(9593824-9593905)
chr5 (17-98)||(12501398-12501479)
chr5 (17-96)||(30128626-30128705)
chr5 (17-97)||(19666617-19666697)
chr5 (17-97)||(42609905-42609984)
chr5 (17-96)||(31547465-31547544)
chr5 (17-91)||(15527410-15527483)
chr5 (17-90)||(9591612-9591685)
chr5 (17-76)||(745729-745788)
chr5 (17-96)||(7179660-7179738)
chr5 (17-76)||(37940117-37940176)
chr5 (17-95)||(11986583-11986659)
chr5 (17-71)||(12499239-12499293)
chr5 (17-71)||(19664783-19664837)
chr5 (17-95)||(34402146-34402222)
chr5 (20-85)||(27020212-27020277)
chr5 (17-88)||(37272707-37272777)
chr5 (17-76)||(42612384-42612443)
chr5 (17-97)||(19505038-19505117)
chr5 (17-97)||(27552659-27552738)
chr5 (18-89)||(29390975-29391046)
chr5 (17-76)||(37270260-37270318)
chr5 (17-76)||(39588274-39588333)
chr5 (17-71)||(20546319-20546373)
chr5 (18-95)||(6720879-6720955)
chr5 (17-98)||(9985358-9985438)
chr5 (17-54)||(11078428-11078465)
chr5 (17-58)||(27550636-27550677)
chr5 (18-89)||(5099856-5099926)
chr5 (18-97)||(15527270-15527348)
chr5 (17-76)||(34401531-34401589)
chr5 (17-71)||(7181206-7181259)
chr5 (17-58)||(9987447-9987488)
chr5 (17-58)||(34663569-34663610)
chr5 (17-48)||(13305594-13305625)
chr5 (18-89)||(15524119-15524189)
chr5 (18-96)||(29388962-29389040)
chr5 (18-59)||(6719512-6719553)
chr5 (20-53)||(11984516-11984549)
chr5 (18-59)||(34857980-34858021)
chr5 (18-94)||(3033069-3033144)
chr5 (17-45)||(31552286-31552314)
[»] chr3 (95 HSPs)
chr3 (17-98)||(23022006-23022087)
chr3 (17-98)||(27330112-27330193)
chr3 (17-97)||(29894738-29894818)
chr3 (17-101)||(40908470-40908554)
chr3 (17-95)||(47910953-47911031)
chr3 (20-97)||(13243557-13243634)
chr3 (17-97)||(22606826-22606906)
chr3 (17-97)||(41695914-41695994)
chr3 (20-96)||(45051738-45051814)
chr3 (17-97)||(53583685-53583765)
chr3 (23-98)||(11123632-11123707)
chr3 (17-96)||(37218168-37218247)
chr3 (17-95)||(27128150-27128228)
chr3 (17-95)||(37787244-37787322)
chr3 (17-95)||(44841226-44841304)
chr3 (17-95)||(50546473-50546551)
chr3 (20-97)||(8849752-8849829)
chr3 (17-97)||(2219957-2220037)
chr3 (17-97)||(15082709-15082789)
chr3 (17-95)||(4230848-4230926)
chr3 (17-95)||(30438267-30438345)
chr3 (17-97)||(41103705-41103785)
chr3 (17-85)||(45172695-45172763)
chr3 (17-97)||(50610578-50610658)
chr3 (17-97)||(52745654-52745734)
chr3 (17-84)||(15084704-15084771)
chr3 (17-84)||(27320865-27320932)
chr3 (17-76)||(53845147-53845206)
chr3 (17-95)||(55219863-55219940)
chr3 (17-89)||(11121080-11121152)
chr3 (17-97)||(18763895-18763974)
chr3 (17-85)||(30043624-30043692)
chr3 (17-76)||(2217892-2217951)
chr3 (17-76)||(13213307-13213366)
chr3 (17-76)||(23019699-23019758)
chr3 (17-76)||(37785300-37785359)
chr3 (17-76)||(44843331-44843390)
chr3 (17-71)||(27239195-27239249)
chr3 (20-98)||(31311665-31311742)
chr3 (17-95)||(38698790-38698867)
chr3 (17-95)||(55413155-55413232)
chr3 (24-97)||(51720860-51720932)
chr3 (17-76)||(4233181-4233240)
chr3 (17-76)||(22604732-22604791)
chr3 (17-76)||(42825876-42825935)
chr3 (17-95)||(53776402-53776479)
chr3 (17-90)||(43338222-43338294)
chr3 (19-92)||(50535960-50536032)
chr3 (18-95)||(54410687-54410763)
chr3 (20-76)||(6177347-6177403)
chr3 (18-98)||(50935459-50935538)
chr3 (20-91)||(3890777-3890847)
chr3 (17-76)||(8852283-8852342)
chr3 (18-89)||(22977835-22977905)
chr3 (17-76)||(27126060-27126119)
chr3 (20-95)||(30361644-30361718)
chr3 (18-85)||(39129070-39129135)
chr3 (18-85)||(40906007-40906074)
chr3 (17-76)||(41101525-41101584)
chr3 (24-90)||(2229437-2229502)
chr3 (17-58)||(30440419-30440460)
chr3 (17-58)||(38235378-38235419)
chr3 (17-97)||(37178242-37178321)
chr3 (20-76)||(37220242-37220298)
chr3 (17-97)||(42827970-42828049)
chr3 (18-90)||(50938508-50938579)
chr3 (18-97)||(7041569-7041646)
chr3 (17-76)||(18410073-18410132)
chr3 (18-89)||(32001216-32001286)
chr3 (17-76)||(45169836-45169895)
chr3 (17-76)||(47913088-47913147)
chr3 (17-76)||(50548627-50548686)
chr3 (17-95)||(10825749-10825826)
chr3 (20-98)||(36465584-36465661)
chr3 (20-78)||(41698227-41698285)
chr3 (182-248)||(50717679-50717744)
chr3 (182-248)||(50795104-50795169)
chr3 (17-58)||(16463788-16463829)
chr3 (17-58)||(18412098-18412139)
chr3 (17-58)||(22429010-22429051)
chr3 (17-58)||(51722956-51722997)
chr3 (18-98)||(22981388-22981467)
chr3 (18-58)||(29864519-29864559)
chr3 (17-65)||(37523067-37523115)
chr3 (18-90)||(54409366-54409437)
chr3 (20-59)||(22731410-22731449)
chr3 (18-97)||(48071722-48071800)
chr3 (18-89)||(55136622-55136691)
chr3 (20-58)||(30363876-30363914)
chr3 (20-58)||(37182415-37182453)
chr3 (17-54)||(40423540-40423577)
chr3 (18-59)||(43863162-43863203)
chr3 (17-54)||(53778441-53778478)
chr3 (18-46)||(42167538-42167566)
chr3 (18-46)||(43357899-43357927)
[»] chr7 (62 HSPs)
chr7 (17-97)||(16273908-16273988)
chr7 (17-100)||(4861902-4861985)
chr7 (17-96)||(44456896-44456975)
chr7 (17-95)||(3412676-3412754)
chr7 (17-97)||(41338272-41338352)
chr7 (17-102)||(723479-723564)
chr7 (17-98)||(38179658-38179739)
chr7 (17-101)||(48684568-48684651)
chr7 (20-95)||(40013623-40013698)
chr7 (20-95)||(46553435-46553510)
chr7 (20-95)||(47906947-47907022)
chr7 (17-95)||(41856272-41856350)
chr7 (21-97)||(20122320-20122396)
chr7 (17-97)||(48950231-48950311)
chr7 (17-95)||(9659011-9659088)
chr7 (17-97)||(21817351-21817429)
chr7 (17-97)||(4657018-4657092)
chr7 (17-97)||(23592538-23592617)
chr7 (20-100)||(41287550-41287629)
chr7 (17-76)||(16277665-16277724)
chr7 (17-76)||(20119893-20119952)
chr7 (34-97)||(33244607-33244670)
chr7 (17-95)||(17286327-17286404)
chr7 (18-84)||(17968401-17968466)
chr7 (18-99)||(19063902-19063983)
chr7 (17-76)||(725625-725684)
chr7 (17-76)||(44459395-44459454)
chr7 (17-64)||(44882602-44882649)
chr7 (98-160)||(11504781-11504843)
chr7 (17-76)||(44884753-44884808)
chr7 (17-95)||(47505669-47505746)
chr7 (20-76)||(4859592-4859648)
chr7 (20-71)||(40015779-40015830)
chr7 (17-76)||(41336138-41336197)
chr7 (17-59)||(21737436-21737478)
chr7 (17-58)||(18995069-18995110)
chr7 (17-54)||(23594626-23594663)
chr7 (17-95)||(28588193-28588263)
chr7 (17-58)||(47909437-47909478)
chr7 (17-85)||(9663691-9663758)
chr7 (17-85)||(33246741-33246808)
chr7 (20-76)||(41858648-41858704)
chr7 (18-97)||(41405938-41406016)
chr7 (17-76)||(46555583-46555642)
chr7 (18-100)||(586160-586241)
chr7 (18-76)||(37708363-37708420)
chr7 (18-76)||(38229767-38229824)
chr7 (17-58)||(21815248-21815289)
chr7 (17-58)||(30760154-30760195)
chr7 (18-99)||(47251964-47252044)
chr7 (17-58)||(48605725-48605766)
chr7 (18-98)||(33982593-33982672)
chr7 (18-89)||(37624145-37624215)
chr7 (17-76)||(48683085-48683143)
chr7 (17-59)||(46934265-46934307)
chr7 (18-59)||(1598930-1598971)
chr7 (17-58)||(48607717-48607758)
chr7 (17-45)||(5374581-5374609)
chr7 (17-97)||(8391439-8391518)
chr7 (18-46)||(33979412-33979440)
chr7 (18-94)||(38224340-38224415)
chr7 (18-46)||(42825652-42825680)
[»] chr2 (56 HSPs)
chr2 (17-97)||(38280259-38280339)
chr2 (17-95)||(25225380-25225458)
chr2 (17-95)||(75574-75652)
chr2 (17-95)||(39965180-39965258)
chr2 (18-99)||(21191843-21191924)
chr2 (17-97)||(28389954-28390032)
chr2 (34-97)||(3904919-3904982)
chr2 (17-76)||(3907038-3907097)
chr2 (17-96)||(15400914-15400992)
chr2 (20-98)||(1053133-1053210)
chr2 (17-98)||(39067040-39067120)
chr2 (24-95)||(2290386-2290456)
chr2 (17-80)||(4738397-4738459)
chr2 (34-97)||(14004023-14004086)
chr2 (17-94)||(3849795-3849871)
chr2 (20-85)||(14006186-14006251)
chr2 (17-76)||(38282396-38282455)
chr2 (18-89)||(39159852-39159922)
chr2 (18-89)||(39209272-39209342)
chr2 (17-98)||(7575618-7575697)
chr2 (20-95)||(4736713-4736786)
chr2 (18-98)||(33182840-33182919)
chr2 (17-76)||(77732-77791)
chr2 (17-84)||(2292476-2292542)
chr2 (17-76)||(25223330-25223388)
chr2 (17-76)||(27551731-27551789)
chr2 (17-59)||(3753040-3753082)
chr2 (17-58)||(28391936-28391977)
chr2 (18-95)||(38932509-38932585)
chr2 (17-58)||(42080882-42080923)
chr2 (17-61)||(37726053-37726097)
chr2 (18-89)||(518047-518117)
chr2 (21-80)||(3851813-3851871)
chr2 (24-95)||(10455678-10455748)
chr2 (16-59)||(14454631-14454674)
chr2 (17-76)||(15152392-15152450)
chr2 (18-89)||(18248655-18248725)
chr2 (18-97)||(20919093-20919170)
chr2 (18-89)||(20919938-20920008)
chr2 (18-97)||(36603003-36603081)
chr2 (17-48)||(42078904-42078935)
chr2 (20-50)||(6647275-6647305)
chr2 (20-58)||(15154506-15154544)
chr2 (17-59)||(27549714-27549756)
chr2 (18-48)||(39775185-39775215)
chr2 (20-85)||(6322414-6322478)
chr2 (17-58)||(6644575-6644616)
chr2 (18-71)||(14452077-14452129)
chr2 (18-95)||(24457845-24457921)
chr2 (18-59)||(27479132-27479173)
chr2 (20-61)||(36600725-36600766)
chr2 (18-46)||(519685-519713)
chr2 (18-58)||(3767890-3767930)
chr2 (20-84)||(15398821-15398883)
chr2 (18-46)||(24460787-24460815)
chr2 (18-46)||(33178757-33178785)
[»] scaffold0115 (2 HSPs)
scaffold0115 (17-95)||(30677-30755)
scaffold0115 (17-80)||(20733-20796)
[»] scaffold0006 (1 HSPs)
scaffold0006 (17-97)||(56481-56561)
[»] chr4 (73 HSPs)
chr4 (17-97)||(20352026-20352106)
chr4 (17-97)||(23417198-23417278)
chr4 (17-97)||(41039572-41039652)
chr4 (17-97)||(54921370-54921450)
chr4 (20-95)||(8941226-8941301)
chr4 (17-95)||(30823697-30823775)
chr4 (17-101)||(46719684-46719767)
chr4 (24-97)||(7489261-7489334)
chr4 (17-97)||(52449330-52449410)
chr4 (17-95)||(13530035-13530112)
chr4 (17-101)||(23931585-23931668)
chr4 (28-95)||(4654973-4655040)
chr4 (20-95)||(47805597-47805671)
chr4 (20-95)||(49875717-49875792)
chr4 (17-98)||(43304841-43304921)
chr4 (17-97)||(3033856-3033936)
chr4 (17-85)||(4652798-4652866)
chr4 (17-85)||(41041593-41041661)
chr4 (17-76)||(7487082-7487141)
chr4 (17-68)||(9366912-9366963)
chr4 (20-95)||(16666658-16666732)
chr4 (17-79)||(28172165-28172226)
chr4 (20-85)||(52447211-52447276)
chr4 (17-97)||(17363030-17363110)
chr4 (17-76)||(23419457-23419516)
chr4 (17-95)||(35046211-35046287)
chr4 (18-97)||(47649399-47649477)
chr4 (17-76)||(49970374-49970433)
chr4 (20-97)||(19869707-19869783)
chr4 (17-94)||(31289460-31289536)
chr4 (20-97)||(43940379-43940456)
chr4 (17-76)||(20354226-20354284)
chr4 (17-64)||(20787192-20787239)
chr4 (17-76)||(31292752-31292810)
chr4 (17-76)||(34072874-34072932)
chr4 (17-95)||(17518858-17518935)
chr4 (17-99)||(34074957-34075038)
chr4 (20-93)||(31624675-31624747)
chr4 (17-85)||(13534715-13534782)
chr4 (20-76)||(17360982-17361038)
chr4 (18-58)||(50496282-50496322)
chr4 (18-97)||(7113852-7113930)
chr4 (17-80)||(23933706-23933768)
chr4 (18-89)||(38623610-38623680)
chr4 (17-59)||(27956563-27956605)
chr4 (20-74)||(42180214-42180267)
chr4 (56-97)||(7489375-7489416)
chr4 (17-58)||(8939267-8939308)
chr4 (17-58)||(16664520-16664561)
chr4 (29-90)||(47650796-47650856)
chr4 (17-58)||(49873586-49873627)
chr4 (17-54)||(55449481-55449518)
chr4 (18-98)||(14270096-14270174)
chr4 (18-94)||(24577911-24577986)
chr4 (22-97)||(10659161-10659234)
chr4 (22-97)||(10873306-10873379)
chr4 (17-48)||(13861919-13861950)
chr4 (18-97)||(26923811-26923889)
chr4 (23-58)||(31309451-31309486)
chr4 (18-89)||(43594791-43594861)
chr4 (18-89)||(48952784-48952854)
chr4 (18-76)||(7111069-7111126)
chr4 (18-88)||(19871232-19871300)
chr4 (20-58)||(20785168-20785206)
chr4 (18-76)||(50792697-50792754)
chr4 (17-58)||(3035929-3035970)
chr4 (18-59)||(6506002-6506043)
chr4 (18-59)||(26917669-26917710)
chr4 (17-46)||(35044934-35044963)
chr4 (17-54)||(35824365-35824402)
chr4 (18-59)||(51943683-51943724)
chr4 (18-90)||(8081198-8081269)
chr4 (20-76)||(17520084-17520139)
[»] scaffold0779 (1 HSPs)
scaffold0779 (20-98)||(140-218)
[»] scaffold0208 (2 HSPs)
scaffold0208 (17-84)||(5874-5940)
scaffold0208 (17-97)||(3860-3939)
[»] scaffold0014 (1 HSPs)
scaffold0014 (20-95)||(71826-71900)
[»] scaffold0259 (1 HSPs)
scaffold0259 (17-54)||(6145-6182)


Alignment Details
Target: chr1 (Bit Score: 143; Significance: 3e-75; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 98 - 248
Target Start/End: Complemental strand, 41326477 - 41326327
Alignment:
Q  98 aatttgctagataattatcaattaactcatgtagttttgcatttaaaagagaaatggaactctgaagtaggaatttccctatacattggtgtttgcgtat 197  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41326477 aatttgctagataattatcaattaactcatgtagttttgcatttaaaagagaaatggaactctgaagtaggaatttccctatacattggtgtttgcgtat 41326378  T
Q  198 atttttagttcatttgtaagtgttatcttactattttttccttttctctcc 248  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  41326377 atttttagttcatttgtaagtgttatcttactattgcttccttttctctcc 41326327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 33706547 - 33706627
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaacc 97  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  33706547 atgtatattacattttgattggttgatatcatgagagggtaaaataccctctaaataagatagggtaatctagaaaaaacc 33706627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 31032053 - 31032133
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaacc 97  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  31032053 atgtatattacattttgattggttgatatcatgagagggtaaaataccctctaaataagagagggtaatctagaaaaaacc 31032133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 17 - 98
Target Start/End: Original strand, 7154839 - 7154920
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaacca 98  Q
    |||||||||||||||||||||||||||||||| | | ||||||||||||||||||||||| ||| ||||||| |||||||||    
T  7154839 atgtatattacattttgattggttgatatcatgataaggtaaaataccctctaaataagagagggtaatctaaaaaaaacca 7154920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 34 - 97
Target Start/End: Complemental strand, 44510494 - 44510431
Alignment:
Q  34 attggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaacc 97  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  44510494 attggttgatatcatgagagggtaaaataccctctaaataagatagggtaatctagaaaaaacc 44510431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 17 - 84
Target Start/End: Complemental strand, 10772621 - 10772554
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataa 84  Q
    |||||||||||||||||||||||||||||||| |||||||||| ||||||||||| |||| |||||||    
T  10772621 atgtatattacattttgattggttgatatcatgagagggtaaattaccctctaaacaagagaggataa 10772554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 17 - 76
Target Start/End: Original strand, 30838840 - 30838899
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataaga 76  Q
    ||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  30838840 atgtatagtacattttgattggttgatatcataagagggtaaattaccctctaaataaga 30838899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 17 - 84
Target Start/End: Complemental strand, 48127656 - 48127589
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataa 84  Q
    ||||||||||||||||||||||||||||||||||||||||||| || |||||||| |||| |||||||    
T  48127656 atgtatattacattttgattggttgatatcataagagggtaaattatcctctaaacaagagaggataa 48127589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 14535431 - 14535353
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaa 95  Q
    |||||||||||||||| ||||||||||||||| ||||| ||||||||| ||||||||||| ||| ||||||| ||||||    
T  14535431 atgtatattacattttaattggttgatatcatgagaggataaaataccatctaaataagagaggctaatctaaaaaaaa 14535353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 35956294 - 35956371
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaa 95  Q
    |||||||||| ||||||||||||||||||||| ||||||| |||||||||||||| |||| ||| |||| |||||||||    
T  35956294 atgtatattatattttgattggttgatatcatgagagggt-aaataccctctaaacaagagagggtaatatagaaaaaa 35956371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 20 - 97
Target Start/End: Original strand, 21097373 - 21097449
Alignment:
Q  20 tatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaacc 97  Q
    ||||||||||||||||||||||||||||| ||| ||| ||||||| | ||||||||||||| ||||||| ||||||||    
T  21097373 tatattacattttgattggttgatatcatgagaaggt-aaataccttataaataagatagggtaatctaaaaaaaacc 21097449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 31029970 - 31029905
Alignment:
Q  19 gtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataa 84  Q
    ||||||||||||||||||| |||||||||| |||||||||| ||||||||||| |||| |||||||    
T  31029970 gtatattacattttgattgattgatatcatgagagggtaaattaccctctaaacaagagaggataa 31029905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 30301076 - 30301000
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaac 96  Q
    ||||||||||||||||||||||||||||| ||  | ||||||| |||||||||||||||| ||| |||||||||||||||    
T  30301076 atgtatattacattttgattggttgatatgat--gggggtaaa-taccctctaaataagagagggtaatctagaaaaaac 30301000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 17 - 76
Target Start/End: Complemental strand, 33704483 - 33704424
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataaga 76  Q
    |||||||||||||||||||||||||||| ||| |||||||||| ||||||||||| ||||    
T  33704483 atgtatattacattttgattggttgataacatgagagggtaaattaccctctaaacaaga 33704424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 17 - 76
Target Start/End: Complemental strand, 36307732 - 36307673
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataaga 76  Q
    |||||||||||||||||||||||||||||||| ||||| |||| ||||||||||| ||||    
T  36307732 atgtatattacattttgattggttgatatcatgagaggataaattaccctctaaacaaga 36307673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 24 - 98
Target Start/End: Original strand, 36732471 - 36732544
Alignment:
Q  24 ttacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaacca 98  Q
    ||||||||| ||||||||||||||| | |||||||| |||||||||||||||  ||| |||||||||||||||||    
T  36732471 ttacattttaattggttgatatcatgaaagggtaaa-taccctctaaataagcgagggtaatctagaaaaaacca 36732544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 20 - 95
Target Start/End: Original strand, 7557504 - 7557578
Alignment:
Q  20 tatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaa 95  Q
    ||||||| ||||||||||||||||||||| ||||||| |||||||||||| | |||| ||  ||||||||||||||    
T  7557504 tatattaaattttgattggttgatatcatgagagggt-aaataccctctagacaagagagagtaatctagaaaaaa 7557578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 23264131 - 23264201
Alignment:
Q  18 tgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctag 89  Q
    ||||||||||||||||||||||||||||| | | ||||| |||||||| ||||| |||||||| ||||||||    
T  23264131 tgtatattacattttgattggttgatatcttgaaagggt-aaataccccctaaacaagatagggtaatctag 23264201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 24780948 - 24780885
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagatagg 80  Q
    ||||||||||||||| ||||| |||||||||| ||| |||||| ||||||||||| ||||||||    
T  24780948 atgtatattacatttcgattgattgatatcatgagacggtaaattaccctctaaacaagatagg 24780885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 76
Target Start/End: Original strand, 44512521 - 44512580
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataaga 76  Q
    |||||||||||||||||||||||||||||||| |||| ||||| || |||||||| ||||    
T  44512521 atgtatattacattttgattggttgatatcatgagagagtaaattaacctctaaacaaga 44512580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 30837839 - 30837762
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaacc 97  Q
    ||||||||||||||||||||| |||||||||| ||| | ||| |   ||||||||||||| ||| ||||||||||||||||    
T  30837839 atgtatattacattttgattgattgatatcatgagatgataata---cctctaaataagagagggtaatctagaaaaaacc 30837762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 17 - 59
Target Start/End: Complemental strand, 35954224 - 35954182
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaa 59  Q
    |||||||||||||||||||||||||||||||| ||||||||||    
T  35954224 atgtatattacattttgattggttgatatcatgagagggtaaa 35954182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 90
Target Start/End: Original strand, 29522047 - 29522119
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctaga 90  Q
    |||||||||||||||||||||||||||||||| | ||||| || ||||||||||| |||| ||| ||| |||||    
T  29522047 atgtatattacattttgattggttgatatcatgacagggt-aattaccctctaaacaagagagggtaacctaga 29522119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 58
Target Start/End: Complemental strand, 46118186 - 46118145
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaa 58  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  46118186 atgtatattacattttgattggttgatatcatgagagggtaa 46118145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 85
Target Start/End: Complemental strand, 7152795 - 7152728
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataat 85  Q
    |||||||||||||||| ||| |||||||||||||||||||||| || |||||||| |||| ||| ||||    
T  7152795 atgtatattacattttaattagttgatatcataagagggtaaatta-cctctaaacaagagagggtaat 7152728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 33004542 - 33004463
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaacc 97  Q
    |||||||||||||||||||| |||||||| || ||||||| |||||||| ||||| |||| ||  |||| |||||||||||    
T  33004542 atgtatattacattttgattagttgatattatgagagggt-aaataccccctaaacaagagagagtaatttagaaaaaacc 33004463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 52407370 - 52407448
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaacc 97  Q
    |||||||||||||||||||||||||||||||| || |||| |||||||| ||||  |||| ||| ||||||| ||||||||    
T  52407370 atgtatattacattttgattggttgatatcatgagggggt-aaataccc-ctaaccaagagagggtaatctataaaaaacc 52407448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 76
Target Start/End: Complemental strand, 7556174 - 7556116
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataaga 76  Q
    ||||||||||||||||||||| |||||||||| ||||||| || ||||||||||| ||||    
T  7556174 atgtatattacattttgattgattgatatcatgagagggt-aattaccctctaaacaaga 7556116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 29647619 - 29647541
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaac 96  Q
    |||||||||| ||||||||||||||||||||| ||| ||| ||||  ||||||||||| | ||| ||||||| |||||||    
T  29647619 atgtatattatattttgattggttgatatcatgagacggt-aaatgtcctctaaataacagagggtaatctaaaaaaaac 29647541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 12769614 - 12769691
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaa 95  Q
    |||||||||||||||||||||| ||||||||| ||| ||| ||| | || ||||| |||| ||| ||||||||||||||    
T  12769614 atgtatattacattttgattgggtgatatcatgagaaggt-aaagatcccctaaacaagagagggtaatctagaaaaaa 12769691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 17 - 59
Target Start/End: Original strand, 25657772 - 25657814
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaa 59  Q
    |||||||||||||||||||||||| ||||||||| ||||||||    
T  25657772 atgtatattacattttgattggttaatatcataaaagggtaaa 25657814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 44299143 - 44299066
Alignment:
Q  18 tgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaac 96  Q
    |||||||||||||||||||||||| |||| | | ||||  |||||||||||||| |||| ||| |||| ||||||||||    
T  44299143 tgtatattacattttgattggttggtatcttga-aggggtaaataccctctaaacaagagagggtaatgtagaaaaaac 44299066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 58
Target Start/End: Complemental strand, 9132934 - 9132893
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaa 58  Q
    |||||||||||||||||||||||| ||||||| |||||||||    
T  9132934 atgtatattacattttgattggttaatatcatgagagggtaa 9132893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 54
Target Start/End: Original strand, 30303080 - 30303117
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagg 54  Q
    |||||||||||||||||||||||||||||||| |||||    
T  30303080 atgtatattacattttgattggttgatatcatgagagg 30303117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 53
Target Start/End: Complemental strand, 21096720 - 21096684
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagag 53  Q
    |||||||||||||||||||||||||||||||| ||||    
T  21096720 atgtatattacattttgattggttgatatcatgagag 21096684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 5328844 - 5328922
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaac 96  Q
    ||||||||||||||||||||| |||||||||| | ||||  |||| ||| ||||| |||| ||| ||||||| |||||||    
T  5328844 atgtatattacattttgattgattgatatcatga-aggggtaaatgccccctaaacaagagagggtaatctaaaaaaaac 5328922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 97
Target Start/End: Original strand, 11757143 - 11757221
Alignment:
Q  18 tgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaacc 97  Q
    ||||||||||||||||||||||||||||| | | |||   ||||||| ||||||||||| ||  |||| |||||||||||    
T  11757143 tgtatattacattttgattggttgatatcttga-aggtgtaaataccttctaaataagaaagtgtaatgtagaaaaaacc 11757221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 76
Target Start/End: Complemental strand, 25655744 - 25655686
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataaga 76  Q
    ||||||||||||||||||||| |||||||||| | ||||| || ||||||||||| ||||    
T  25655744 atgtatattacattttgattgattgatatcatgaaagggt-aattaccctctaaacaaga 25655686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 44110206 - 44110284
Alignment:
Q  20 tatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaaccaa 99  Q
    ||||||| |||||||||||||||| || | | ||||  ||||| ||||||||||| ||||| |||| |||||||||||||    
T  44110206 tatattatattttgattggttgatgtcttga-agggataaatatcctctaaataaaatagggtaatgtagaaaaaaccaa 44110284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 97
Target Start/End: Original strand, 46464550 - 46464616
Alignment:
Q  30 tttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaacc 97  Q
    ||||||||||||||||||| ||||| | ||| |||| ||||| |||| ||| ||||||||||||||||    
T  46464550 tttgattggttgatatcatgagaggat-aaacaccccctaaacaagagagggtaatctagaaaaaacc 46464616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 4640372 - 4640429
Alignment:
Q  18 tgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataaga 76  Q
    ||||||||||||||||||||||||||||| | | ||||| ||||| |||||||| ||||    
T  4640372 tgtatattacattttgattggttgatatcttgaaagggt-aaatatcctctaaacaaga 4640429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 43846282 - 43846213
Alignment:
Q  18 tgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatcta 88  Q
    ||||||||||||||||||| ||||||||| | | ||| | ||||||||  ||||||||||||| |||||||    
T  43846282 tgtatattacattttgattagttgatatcttgaaaggat-aaataccccttaaataagatagggtaatcta 43846213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 58
Target Start/End: Complemental strand, 52404547 - 52404509
Alignment:
Q  20 tatattacattttgattggttgatatcataagagggtaa 58  Q
    ||||||| ||||||||||||||||||||| |||||||||    
T  52404547 tatattatattttgattggttgatatcatgagagggtaa 52404509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 97
Target Start/End: Original strand, 43847730 - 43847807
Alignment:
Q  18 tgtatattacattttgattggttgatatcat-aagagggtaaaataccctctaaataagataggataatctagaaaaaacc 97  Q
    ||||||||||||||||||||||||||||| | ||||||   |||||||| ||||| |||| ||| |||| |||||||||||    
T  43847730 tgtatattacattttgattggttgatatcttgaagagg--taaataccc-ctaaacaagagagggtaatgtagaaaaaacc 43847807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 53
Target Start/End: Complemental strand, 51086650 - 51086617
Alignment:
Q  20 tatattacattttgattggttgatatcataagag 53  Q
    ||||||||||||||||||||||||||||| ||||    
T  51086650 tatattacattttgattggttgatatcatgagag 51086617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 97
Target Start/End: Complemental strand, 4638227 - 4638151
Alignment:
Q  18 tgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaacc 97  Q
    |||||||||||||||||||| |||||||| | | ||||| ||||||||| |||| |||| ||  |||| |||||||||||    
T  4638227 tgtatattacattttgattgtttgatatctttaaagggt-aaataccctataaacaagagag--taatgtagaaaaaacc 4638151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 49
Target Start/End: Original strand, 14488922 - 14488954
Alignment:
Q  17 atgtatattacattttgattggttgatatcata 49  Q
    |||||||||||||||| ||||||||||||||||    
T  14488922 atgtatattacatttttattggttgatatcata 14488954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 29651054 - 29651094
Alignment:
Q  18 tgtatattacattttgattggttgatatcataagagggtaa 58  Q
    ||||||||||||||| |||| |||||||||| |||||||||    
T  29651054 tgtatattacattttaattgattgatatcatgagagggtaa 29651094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 76
Target Start/End: Complemental strand, 35954301 - 35954246
Alignment:
Q  20 tatattacattttgattggttgatatcataagagggtaaaataccctctaaataaga 76  Q
    |||||||||||| |||||||||||||||| | ||||| || ||||||||||| ||||    
T  35954301 tatattacatttcgattggttgatatcatgatagggt-aattaccctctaaacaaga 35954246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 119; Significance: 7e-61; HSPs: 69)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 98 - 248
Target Start/End: Complemental strand, 42312693 - 42312543
Alignment:
Q  98 aatttgctagataattatcaattaactcatgtagttttgcatttaaaagagaaatggaactctgaagtaggaatttccctatacattggtgtttgcgtat 197  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||  |||| ||||||||||||||||||    
T  42312693 aatttgctagataattatcaattaactcatgtagttttgcatttaaaagagaaatggaactatgaagcagaaattagcctacacattggtgtttgcgtat 42312594  T
Q  198 atttttagttcatttgtaagtgttatcttactattttttccttttctctcc 248  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  42312593 atttttagttcatttgtaagtgttatcttactattgcttccttttctctcc 42312543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 4621562 - 4621484
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaa 95  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||    
T  4621562 atgtatattacattttgattggttgatatcatgagagggtaaaataccctctaaataagatagggtaatctagaaaaaa 4621484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 16097602 - 16097682
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaacc 97  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  16097602 atgtatattacattttgattggttgatatcatgagagggtaaaataccctctaaataagagagggtaatctagaaaaaacc 16097682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 41182480 - 41182400
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaacc 97  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  41182480 atgtatattacattttgatttgttgatatcatgagagggtaaaataccctctaaataagagaggataatctagaaaaaacc 41182400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 17 - 99
Target Start/End: Original strand, 18957394 - 18957476
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaaccaa 99  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  18957394 atgtatattacattttgattgattgatatcatgagagggtaaaataccctctaaataagagagggtaatctagaaaaaaccaa 18957476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 278721 - 278801
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaacc 97  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| || ||| ||||||||||||||||    
T  278721 atgtatattacattttgattggttgatatcatgagagggtaaaataccctctaaatatgagagggtaatctagaaaaaacc 278801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 637131 - 637051
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaacc 97  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| || ||| ||||||||||||||||    
T  637131 atgtatattacattttgattggttgatatcatgagagggtaaaataccctctaaatatgagagggtaatctagaaaaaacc 637051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 822934 - 822854
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaacc 97  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| || ||| ||||||||||||||||    
T  822934 atgtatattacattttgattggttgatatcatgagagggtaaaataccctctaaatatgagagggtaatctagaaaaaacc 822854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 3703248 - 3703168
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaacc 97  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  3703248 atgtatattacattttgattgattgatatcatgagagggtaaaataccctctaaataagagagggtaatctagaaaaaacc 3703168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 23345251 - 23345171
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaacc 97  Q
    |||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| ||| ||||||||||||||||    
T  23345251 atgtatattacattttgattggttgatatcatgagaggataaaataccctctaaataagagagggtaatctagaaaaaacc 23345171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 26965444 - 26965364
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaacc 97  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| |||| |||||||||||    
T  26965444 atgtatattacattttgattggttgatatcatgagagggtaaaataccctctaaataagagagggtaatttagaaaaaacc 26965364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 17 - 100
Target Start/End: Complemental strand, 38059323 - 38059240
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaaccaat 100  Q
    |||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||| |||||||||||    
T  38059323 atgtatattatattttgattggttgatatcatgagagggtaaaataccctctaaataagagagggtaatctaaaaaaaaccaat 38059240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 15881311 - 15881233
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaa 95  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||| ||||||    
T  15881311 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagagagagtaatctaaaaaaaa 15881233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 20 - 97
Target Start/End: Complemental strand, 17946660 - 17946583
Alignment:
Q  20 tatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaacc 97  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  17946660 tatattacattttaattggttgatatcatgagagggtaaaataccctctaaataagagagggtaatctagaaaaaacc 17946583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 2081446 - 2081366
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaacc 97  Q
    |||||||||||||||||||||||||||||||| | | |||||||||| |||||||||||||||| ||||||||||||||||    
T  2081446 atgtatattacattttgattggttgatatcatgataaggtaaaatacactctaaataagatagggtaatctagaaaaaacc 2081366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 30476052 - 30475974
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaa 95  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||| |||| |||| ||| ||||||||||||||    
T  30476052 atgtatattacatcttgattggttgatatcataagagggtaaaataccctataaacaagagagggtaatctagaaaaaa 30475974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 21 - 98
Target Start/End: Complemental strand, 17852465 - 17852388
Alignment:
Q  21 atattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaacca 98  Q
    |||||||||||||||||||||||||||| |||| ||||||||||||||||||| || ||| |||||||||||||||||    
T  17852465 atattacattttgattggttgatatcatgagagagtaaaataccctctaaatatgagagggtaatctagaaaaaacca 17852388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 39859937 - 39860016
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaacc 97  Q
    |||||||||||||||||||||||||||||||| ||||||| |||||||||||||| |||| ||| ||||||||||||||||    
T  39859937 atgtatattacattttgattggttgatatcatgagagggt-aaataccctctaaacaagagagggtaatctagaaaaaacc 39860016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 38576665 - 38576588
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaa 95  Q
    |||||||||||||||||||||||||||||||| ||||||| |||||||||||||| |||| ||| ||||||||||||||    
T  38576665 atgtatattacattttgattggttgatatcatgagagggt-aaataccctctaaacaagagagggtaatctagaaaaaa 38576588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 17 - 78
Target Start/End: Original strand, 38060905 - 38060966
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagata 78  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  38060905 atgtatattacattttgattggttgatatcataagagggtaaattaccctctaaacaagata 38060966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 85
Target Start/End: Original strand, 4622883 - 4622951
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataat 85  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| ||| ||||    
T  4622883 atgtatattacattttgattggttgatatcataagagggtaaattaccctctaaacaagagagggtaat 4622951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 40302493 - 40302414
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaacc 97  Q
    |||||||||||||||||||||||||||||||| ||||||| |||||||||||||| |||| || ||||| |||||||||||    
T  40302493 atgtatattacattttgattggttgatatcatgagagggt-aaataccctctaaacaagagagaataatatagaaaaaacc 40302414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 101
Target Start/End: Complemental strand, 45407322 - 45407239
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaaccaatt 101  Q
    |||||||||||||||||||||||||||||||| |  ||||||| ||||||||||| |||| |||||||||||||||||| |||||    
T  45407322 atgtatattacattttgattggttgatatcatgaaggggtaaa-taccctctaaacaagagaggataatctagaaaaaaacaatt 45407239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 6096821 - 6096898
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaa 95  Q
    ||||||||||||||||||||||||||||| || ||||||| ||||| ||||||||||||| ||| ||||||||||||||    
T  6096821 atgtatattacattttgattggttgatattatgagagggt-aaatatcctctaaataagagagggtaatctagaaaaaa 6096898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 17 - 98
Target Start/End: Original strand, 40618485 - 40618565
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaacca 98  Q
    ||||||||||||| |||||||||||||||||| || |||| |||||||| ||||| |||||||| |||||||||||||||||    
T  40618485 atgtatattacatgttgattggttgatatcatgagggggt-aaataccccctaaacaagatagggtaatctagaaaaaacca 40618565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 76
Target Start/End: Original strand, 25583745 - 25583804
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataaga 76  Q
    |||||||||||||||||||||||||||||||| |||||||||| ||||||||||| ||||    
T  25583745 atgtatattacattttgattggttgatatcatgagagggtaaattaccctctaaacaaga 25583804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 76
Target Start/End: Complemental strand, 27911961 - 27911902
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataaga 76  Q
    |||||||||||||||||||||||||||||||| |||||||||| ||||||||||| ||||    
T  27911961 atgtatattacattttgattggttgatatcatgagagggtaaattaccctctaaacaaga 27911902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 76
Target Start/End: Complemental strand, 27958380 - 27958321
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataaga 76  Q
    |||||||||||||||||||||||||||||||| |||||||||| ||||||||||| ||||    
T  27958380 atgtatattacattttgattggttgatatcatgagagggtaaattaccctctaaacaaga 27958321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 97
Target Start/End: Original strand, 39070298 - 39070376
Alignment:
Q  18 tgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaacc 97  Q
    ||||||||||||||||||||||||||||| | | ||||| |||||| ||||||| ||||||||||||| |||||||||||    
T  39070298 tgtatattacattttgattggttgatatcttgaaagggt-aaatacactctaaacaagataggataatgtagaaaaaacc 39070376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 18 - 98
Target Start/End: Complemental strand, 35019313 - 35019234
Alignment:
Q  18 tgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaacca 98  Q
    |||||| |||||||||||||||||||||| | | ||||  ||||||||||||||||||||||| |||| ||||||||||||    
T  35019313 tgtatagtacattttgattggttgatatcttga-agggataaataccctctaaataagatagggtaatgtagaaaaaacca 35019234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 17 - 76
Target Start/End: Original strand, 17853415 - 17853474
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataaga 76  Q
    |||||||||||||||||||||||||||||||| |||| ||||| ||||||||||| ||||    
T  17853415 atgtatattacattttgattggttgatatcatgagagagtaaattaccctctaaacaaga 17853474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 24 - 95
Target Start/End: Original strand, 38099260 - 38099331
Alignment:
Q  24 ttacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaa 95  Q
    |||||||||||||| ||||||| |||||||| |||||||||||||||| |||| ||| |||| |||||||||    
T  38099260 ttacattttgattgattgatattataagaggataaaataccctctaaacaagagagggtaatttagaaaaaa 38099331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 276654 - 276589
Alignment:
Q  20 tatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataat 85  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||| |||| |||| ||| ||||    
T  276654 tatattacattttgattggttgatatcatgagagggtaaattaccctataaacaagagagggtaat 276589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 639195 - 639260
Alignment:
Q  20 tatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataat 85  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||| |||| |||| ||| ||||    
T  639195 tatattacattttgattggttgatatcatgagagggtaaattaccctataaacaagagagggtaat 639260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 825001 - 825066
Alignment:
Q  20 tatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataat 85  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||| |||| |||| ||| ||||    
T  825001 tatattacattttgattggttgatatcatgagagggtaaattaccctataaacaagagagggtaat 825066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 20 - 89
Target Start/End: Complemental strand, 44256030 - 44255961
Alignment:
Q  20 tatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctag 89  Q
    ||||||||||||| ||||||||||||||| |||||||||| || ||||||||||||| ||| ||| ||||    
T  44256030 tatattacattttaattggttgatatcatgagagggtaaattatcctctaaataagagagggtaacctag 44255961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 85
Target Start/End: Original strand, 17948637 - 17948705
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataat 85  Q
    |||||||||||||||| ||||||||||||||| ||||| |||| ||||||||||| |||| ||| ||||    
T  17948637 atgtatattacattttaattggttgatatcatgagaggataaattaccctctaaacaagagagggtaat 17948705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 76
Target Start/End: Complemental strand, 39857937 - 39857878
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataaga 76  Q
    |||||||||| ||||||||||||||||||||| |||||||||| |||||| |||| ||||    
T  39857937 atgtatattatattttgattggttgatatcatgagagggtaaattaccctataaacaaga 39857878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 76
Target Start/End: Original strand, 45409283 - 45409341
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataaga 76  Q
    |||||||||||||||||||||||||||||||| ||||||| || |||||| |||||||||    
T  45409283 atgtatattacattttgattggttgatatcatgagagggt-aattaccctataaataaga 45409341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 15883558 - 15883615
Alignment:
Q  19 gtatattacattttgattggttgatatcataagagggtaaaataccctctaaataaga 76  Q
    ||||||||||||||||||| |||||||||| ||||| |||| ||||||||||| ||||    
T  15883558 gtatattacattttgattgattgatatcatgagaggataaattaccctctaaacaaga 15883615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 70
Target Start/End: Complemental strand, 18955173 - 18955120
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaa 70  Q
    ||||||| |||||||||||||||||||||||| ||||| |||| ||||||||||    
T  18955173 atgtatagtacattttgattggttgatatcatgagaggataaattaccctctaa 18955120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 58
Target Start/End: Original strand, 40304541 - 40304582
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaa 58  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  40304541 atgtatattacattttgattggttgatatcatgagagggtaa 40304582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 21 - 97
Target Start/End: Original strand, 30112174 - 30112249
Alignment:
Q  21 atattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaacc 97  Q
    ||||||||||||||||| |||||||||| ||||||| |||||| | ||||| |||| ||| | ||||||||||||||    
T  30112174 atattacattttgattgattgatatcatgagagggt-aaatactccctaaacaagagagggtcatctagaaaaaacc 30112249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 42647294 - 42647373
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaacc 97  Q
    |||||||||| ||||||||||||||||||||| | ||||  |||||||||||||| || | ||| ||||||| ||||||||    
T  42647294 atgtatattatattttgattggttgatatcatga-aggggtaaataccctctaaacaatagagggtaatctaaaaaaaacc 42647373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 15825145 - 15825071
Alignment:
Q  18 tgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaa 93  Q
    ||||||||||||||||||||||||||||| | | ||||| ||||| ||| ||||||||| ||| |||| |||||||    
T  15825145 tgtatattacattttgattggttgatatcttgaaagggt-aaatatcctataaataagagagggtaatgtagaaaa 15825071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 26951285 - 26951354
Alignment:
Q  18 tgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctag 89  Q
    ||||||||||||||||||||||||||||| ||| ||||| |||||||| ||||| | |||||| ||||||||    
T  26951285 tgtatattacattttgattggttgatatcttaaaagggt-aaataccc-ctaaacacgatagggtaatctag 26951354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 92
Target Start/End: Complemental strand, 28084828 - 28084755
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaa 92  Q
    |||||||||||||||| || |||||||||||| ||||||| |||||||| ||||| |||||||| |||| ||||||    
T  28084828 atgtatattacatttttat-ggttgatatcatgagagggt-aaataccccctaaacaagatagggtaatttagaaa 28084755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 95
Target Start/End: Original strand, 41546845 - 41546915
Alignment:
Q  24 ttacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaa 95  Q
    |||||||||||||||||||||| || ||||||| |||||||||||||||| || ||  |||||||| |||||    
T  41546845 ttacattttgattggttgatatgatgagagggt-aaataccctctaaataggagagagtaatctagtaaaaa 41546915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 41671476 - 41671546
Alignment:
Q  18 tgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctag 89  Q
    |||||||||||| |||||||||||||||| | | ||||| ||||||||| |||| |||||||| ||||||||    
T  41671476 tgtatattacatgttgattggttgatatcttgaaagggt-aaataccctataaacaagatagggtaatctag 41671546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 16 - 58
Target Start/End: Original strand, 30556818 - 30556860
Alignment:
Q  16 catgtatattacattttgattggttgatatcataagagggtaa 58  Q
    |||||||||||||||||||||| |||||||||| |||||||||    
T  30556818 catgtatattacattttgattgattgatatcatgagagggtaa 30556860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 58
Target Start/End: Original strand, 3705264 - 3705305
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaa 58  Q
    |||||||||||||||| ||||||||||||||| |||||||||    
T  3705264 atgtatattacattttaattggttgatatcatgagagggtaa 3705305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 58
Target Start/End: Original strand, 13141437 - 13141478
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaa 58  Q
    |||||||||| ||||||||||||||||||||| |||||||||    
T  13141437 atgtatattatattttgattggttgatatcatgagagggtaa 13141478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 58
Target Start/End: Complemental strand, 16095846 - 16095805
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaa 58  Q
    |||||||||| ||||||||||||||||||||| |||||||||    
T  16095846 atgtatattatattttgattggttgatatcatgagagggtaa 16095805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 74
Target Start/End: Original strand, 38577185 - 38577241
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataa 74  Q
    |||||||||||||||||| ||||||||||||| |||| || || ||||||||||||||    
T  38577185 atgtatattacattttgaatggttgatatcatgagagagt-aattaccctctaaataa 38577241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 58
Target Start/End: Original strand, 44258045 - 44258086
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaa 58  Q
    ||||||||||||||||||||||||||||| || |||||||||    
T  44258045 atgtatattacattttgattggttgatattatgagagggtaa 44258086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 69
Target Start/End: Original strand, 2082413 - 2082465
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctcta 69  Q
    ||||| ||||||||||||||| |||||||||| |||||||||| ||| |||||    
T  2082413 atgtacattacattttgattgattgatatcatgagagggtaaattactctcta 2082465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 76
Target Start/End: Complemental strand, 3846575 - 3846520
Alignment:
Q  20 tatattacattttgattggttgatatcataagagggtaaaataccctctaaataaga 76  Q
    ||||||||||||||||||||| ||||||| ||||||| || ||||||||||| ||||    
T  3846575 tatattacattttgattggtttatatcatgagagggt-aattaccctctaaacaaga 3846520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 15825910 - 15825981
Alignment:
Q  18 tgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctaga 90  Q
    ||||||||||||||||||||||||||||| | | ||||| ||||| |||||||| |||| | | |||||||||    
T  15825910 tgtatattacattttgattggttgatatcttgaaagggt-aaatatcctctaaacaagagacgttaatctaga 15825981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 80
Target Start/End: Complemental strand, 41544912 - 41544853
Alignment:
Q  20 tatattacattttgattggttgatatcataagagggtaaaataccctctaaataagatagg 80  Q
    ||||||||||||||||||||||||||||| ||||| | || |||| |||||| ||||||||    
T  41544912 tatattacattttgattggttgatatcatgagaggat-aattaccatctaaacaagatagg 41544853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 5588103 - 5588142
Alignment:
Q  20 tatattacattttgattggttgatatcataagagggtaaa 59  Q
    ||||||||||||||||||||||||||||| || |||||||    
T  5588103 tatattacattttgattggttgatatcatgagggggtaaa 5588142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 23627511 - 23627581
Alignment:
Q  18 tgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctag 89  Q
    ||||||||||||||||||| ||||||||| ||| ||| | ||||| |||||||||||||  || ||||||||    
T  23627511 tgtatattacattttgatttgttgatatcttaaaaggat-aaatatcctctaaataagagggggtaatctag 23627581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 97
Target Start/End: Complemental strand, 29725566 - 29725488
Alignment:
Q  18 tgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaacc 97  Q
    ||||||||||||||||||||||||||||| ||| ||| | |||||||| | | | |||| ||| |||| |||||||||||    
T  29725566 tgtatattacattttgattggttgatatcttaaaaggat-aaatacccccaatacaagagagggtaatgtagaaaaaacc 29725488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 48
Target Start/End: Original strand, 36193405 - 36193436
Alignment:
Q  17 atgtatattacattttgattggttgatatcat 48  Q
    ||||||||||||||||||||||||||||||||    
T  36193405 atgtatattacattttgattggttgatatcat 36193436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 59
Target Start/End: Original strand, 42737523 - 42737558
Alignment:
Q  24 ttacattttgattggttgatatcataagagggtaaa 59  Q
    ||||||| ||||||||||||||||||||||||||||    
T  42737523 ttacattctgattggttgatatcataagagggtaaa 42737558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 3852017 - 3852066
Alignment:
Q  19 gtatattacattttgattggttgatatcataagagggtaaaataccctcta 69  Q
    ||||||||||| |||||||||| ||||||| ||||||| ||||||||||||    
T  3852017 gtatattacatattgattggttaatatcatgagagggt-aaataccctcta 3852066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 58
Target Start/End: Complemental strand, 42734717 - 42734679
Alignment:
Q  20 tatattacattttgattggttgatatcataagagggtaa 58  Q
    ||||||||||||||||||||| ||||||| |||||||||    
T  42734717 tatattacattttgattggtttatatcatgagagggtaa 42734679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 51
Target Start/End: Original strand, 43695309 - 43695343
Alignment:
Q  17 atgtatattacattttgattggttgatatcataag 51  Q
    |||||||||||||||||||| ||||||||||||||    
T  43695309 atgtatattacattttgattagttgatatcataag 43695343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 58
Target Start/End: Complemental strand, 13139399 - 13139358
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaa 58  Q
    ||||||||||| ||||||||||||||||| || |||||||||    
T  13139399 atgtatattaccttttgattggttgatatgatgagagggtaa 13139358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 59
Target Start/End: Original strand, 31643020 - 31643061
Alignment:
Q  18 tgtatattacattttgattggttgatatcataagagggtaaa 59  Q
    ||||||||||||||||||||||||||||| | | ||||||||    
T  31643020 tgtatattacattttgattggttgatatcttgaaagggtaaa 31643061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 119; Significance: 7e-61; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 98 - 248
Target Start/End: Complemental strand, 20909579 - 20909429
Alignment:
Q  98 aatttgctagataattatcaattaactcatgtagttttgcatttaaaagagaaatggaactctgaagtaggaatttccctatacattggtgtttgcgtat 197  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||  |||| |||||||||||||| |||    
T  20909579 aatttgctagataattatcaattaactcatgtagttttgcatttaaaagagaaatggaactctgaagcaggaattagcctacacattggtgtttgcatat 20909480  T
Q  198 atttttagttcatttgtaagtgttatcttactattttttccttttctctcc 248  Q
    ||||||||||||||||||||||||||||| |||||  ||||||||||||||    
T  20909479 atttttagttcatttgtaagtgttatcttgctattgcttccttttctctcc 20909429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 98 - 248
Target Start/End: Complemental strand, 20924027 - 20923877
Alignment:
Q  98 aatttgctagataattatcaattaactcatgtagttttgcatttaaaagagaaatggaactctgaagtaggaatttccctatacattggtgtttgcgtat 197  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||  |||| |||||||||||||| |||    
T  20924027 aatttgctagataattatcaattaactcatgtagttttgcatttaaaagagaaatggaactctgaagcaggaattagcctacacattggtgtttgcatat 20923928  T
Q  198 atttttagttcatttgtaagtgttatcttactattttttccttttctctcc 248  Q
    ||||||||||||||||||||||||||||| |||||  ||||||||||||||    
T  20923927 atttttagttcatttgtaagtgttatcttgctattgcttccttttctctcc 20923877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 14105928 - 14106008
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaacc 97  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  14105928 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagagagggtaatctagaaaaaacc 14106008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 17 - 98
Target Start/End: Original strand, 16922238 - 16922319
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaacca 98  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  16922238 atgtatattacattttgattggttgatatcatgagagggtaaaataccctctaaataagagagggtaatctagaaaaaacca 16922319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 17 - 98
Target Start/End: Complemental strand, 17557652 - 17557571
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaacca 98  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  17557652 atgtatattacattttgattggttgatatcatgagagggtaaaataccctctaaataagagagggtaatctagaaaaaacca 17557571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 98 - 248
Target Start/End: Original strand, 27445416 - 27445567
Alignment:
Q  98 aatttgctagataattatcaattaactcatgtagttttgcatttaaaagagaaat--ggaactctgaagtaggaatttccctatacattggtgtttgcgt 195  Q
    ||||||||||||||||||||| || ||||||||||| ||||||||||| || |||  || | ||||||| || ||||  || | | | |||||||||| |    
T  27445416 aatttgctagataattatcaactagctcatgtagttctgcatttaaaa-agtaatagggcattctgaagcagcaattagccaacatactggtgtttgcat 27445514  T
Q  196 atatttttagttcatttgtaagtgttatcttactattttttccttttctctcc 248  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  27445515 atatttttagttcatttgtaagtgttatcttactattgcttccttttctctcc 27445567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 17 - 101
Target Start/End: Original strand, 23582203 - 23582287
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaaccaatt 101  Q
    |||||||||||||||| |||||||||| |||| ||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  23582203 atgtatattacattttaattggttgatgtcatgagagggtaaaataccctctaaataagagagggtaatctagaaaaaaccaatt 23582287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 17 - 99
Target Start/End: Original strand, 27784415 - 27784497
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaaccaa 99  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||| ||||||||||    
T  27784415 atgtatattacatttttattggttgatatcatgagagggtaaaataccctctaaataagagagggtaatctaaaaaaaaccaa 27784497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 20 - 97
Target Start/End: Complemental strand, 4587938 - 4587861
Alignment:
Q  20 tatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaacc 97  Q
    ||||||||||||| ||||||||||||||| ||||||||||||| ||||||||||||| ||| ||||||||||||||||    
T  4587938 tatattacattttaattggttgatatcatgagagggtaaaatatcctctaaataagagagggtaatctagaaaaaacc 4587861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 953732 - 953654
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaa 95  Q
    |||||||||||||||||||||||||||||||| |||||||||| ||||||||||| || ||||  ||||||||||||||    
T  953732 atgtatattacattttgattggttgatatcatgagagggtaaattaccctctaaacaaaatagagtaatctagaaaaaa 953654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 76
Target Start/End: Original strand, 11837779 - 11837838
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataaga 76  Q
    |||||||||||||||||||||||||||||||| |||||||||| ||||||||||| ||||    
T  11837779 atgtatattacattttgattggttgatatcatgagagggtaaattaccctctaaacaaga 11837838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 76
Target Start/End: Complemental strand, 23580158 - 23580099
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataaga 76  Q
    |||||||||||||||||||||||||||||||| |||||||||| ||||||||||| ||||    
T  23580158 atgtatattacattttgattggttgatatcatgagagggtaaattaccctctaaacaaga 23580099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 76
Target Start/End: Complemental strand, 27782339 - 27782280
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataaga 76  Q
    |||||||||||||||||||||||||||||||| |||||||||| ||||||||||| ||||    
T  27782339 atgtatattacattttgattggttgatatcatgagagggtaaattaccctctaaacaaga 27782280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 96
Target Start/End: Complemental strand, 5686413 - 5686338
Alignment:
Q  20 tatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaac 96  Q
    ||||||||||||||||||||||||||||| |||| | ||||||||||||||| || | ||| |||||||||||||||    
T  5686413 tatattacattttgattggttgatatcatgagagag-aaaataccctctaaacaaaagagggtaatctagaaaaaac 5686338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 17 - 76
Target Start/End: Original strand, 11154815 - 11154874
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataaga 76  Q
    |||||||||||||||||||||||||||||||| ||||| |||| |||||| |||||||||    
T  11154815 atgtatattacattttgattggttgatatcatgagaggctaaattaccctttaaataaga 11154874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 17 - 76
Target Start/End: Complemental strand, 14103864 - 14103805
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataaga 76  Q
    |||||||||||||||||||||||||||||| | |||||||||| ||||||||||| ||||    
T  14103864 atgtatattacattttgattggttgatatcgtgagagggtaaattaccctctaaacaaga 14103805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 17 - 76
Target Start/End: Original strand, 17551009 - 17551068
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataaga 76  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||||| |||| ||||    
T  17551009 atgtatattacattttgattggttgatatcatgagagggtaaattaccctttaaacaaga 17551068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 17 - 94
Target Start/End: Original strand, 28580949 - 28581025
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaa 94  Q
    |||||||||||||||||||||||| ||||||| ||||| | |||||||||||||| |||| ||| ||||||| |||||    
T  28580949 atgtatattacattttgattggtttatatcatgagaggat-aaataccctctaaacaagagagggtaatctaaaaaaa 28581025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 27438286 - 27438226
Alignment:
Q  16 catgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataaga 76  Q
    ||||||||||||||||||||||||||||||||| ||| | |||| ||||||||||| ||||    
T  27438286 catgtatattacattttgattggttgatatcatgagaagataaattaccctctaaacaaga 27438226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 76
Target Start/End: Original strand, 4590003 - 4590062
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataaga 76  Q
    ||||||||||||||| ||||| |||||||||| ||||| |||| ||||||||||||||||    
T  4590003 atgtatattacatttggattgattgatatcatgagaggataaattaccctctaaataaga 4590062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 76
Target Start/End: Complemental strand, 24083070 - 24083012
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataaga 76  Q
    |||||||||||||| ||||||||||||||||| ||||||| || ||||||||||||||||    
T  24083070 atgtatattacattatgattggttgatatcatgagagggt-aattaccctctaaataaga 24083012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 13866090 - 13866009
Alignment:
Q  18 tgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaaccaattt 102  Q
    ||||||||||||||||||||||||||||| | |  |||| |||||||  ||||| |||||||| |||| ||||||||||||||||    
T  13866090 tgtatattacattttgattggttgatatcttgaacgggt-aaatacc--ctaaacaagatagggtaatatagaaaaaaccaattt 13866009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 76
Target Start/End: Complemental strand, 25109422 - 25109367
Alignment:
Q  20 tatattacattttgattggttgatatcataagagggtaaaataccctctaaataaga 76  Q
    ||||||||||||||||||||||||||||| ||||||| || ||||||||||| ||||    
T  25109422 tatattacattttgattggttgatatcatgagagggt-aattaccctctaaacaaga 25109367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 85
Target Start/End: Complemental strand, 28578497 - 28578430
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataat 85  Q
    ||||||||||||||||||||||||||||| || |||| || || ||||||||||| |||| ||| ||||    
T  28578497 atgtatattacattttgattggttgatataatgagagagt-aattaccctctaaagaagagagggtaat 28578430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 48
Target Start/End: Complemental strand, 15287535 - 15287504
Alignment:
Q  17 atgtatattacattttgattggttgatatcat 48  Q
    ||||||||||||||||||||||||||||||||    
T  15287535 atgtatattacattttgattggttgatatcat 15287504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 58
Target Start/End: Original strand, 955780 - 955818
Alignment:
Q  20 tatattacattttgattggttgatatcataagagggtaa 58  Q
    ||||||||||||||||||||| ||||||| |||||||||    
T  955780 tatattacattttgattggttaatatcatgagagggtaa 955818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 47
Target Start/End: Original strand, 24084557 - 24084587
Alignment:
Q  17 atgtatattacattttgattggttgatatca 47  Q
    |||||||||||||||||||||||||||||||    
T  24084557 atgtatattacattttgattggttgatatca 24084587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 70; Significance: 1e-31; HSPs: 3)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 98 - 248
Target Start/End: Complemental strand, 35272 - 35121
Alignment:
Q  98 aatttgctagataattatcaattaactcatgtagttttgcatttaaaagagaaat--ggaactctgaagtaggaatttccctatacattggtgtttgcgt 195  Q
    ||||||||||||||||||||| ||||||||||| || ||||||||||| || |||  || ||||||||| || ||||  || | | | |||||||||| |    
T  35272 aatttgctagataattatcaactaactcatgtatttctgcatttaaaa-agtaatagggcactctgaagcagcaattagccaacatactggtgtttgcat 35174  T
Q  196 atatttttagttcatttgtaagtgttatcttactattttttccttttctctcc 248  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  35173 atatttttagttcatttgtaagtgttatcttactattgcttccttttctctcc 35121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 98 - 248
Target Start/End: Complemental strand, 41942 - 41791
Alignment:
Q  98 aatttgctagataattatcaattaactcatgtagttttgcatttaaaagagaaat--ggaactctgaagtaggaatttccctatacattggtgtttgcgt 195  Q
    ||||||||||||||||||||| || ||||||||||| ||||||||||| || |||  || | ||||||| || ||||  || | | | |||||||||| |    
T  41942 aatttgctagataattatcaactagctcatgtagttctgcatttaaaa-agtaatagggcattctgaagcagcaattagccaacatactggtgtttgcat 41844  T
Q  196 atatttttagttcatttgtaagtgttatcttactattttttccttttctctcc 248  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  41843 atatttttagttcatttgtaagtgttatcttactattgcttccttttctctcc 41791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 76
Target Start/End: Original strand, 49076 - 49136
Alignment:
Q  16 catgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataaga 76  Q
    ||||||||||||||||||||||||||||||||| ||| | |||| ||||||||||| ||||    
T  49076 catgtatattacattttgattggttgatatcatgagaagataaattaccctctaaacaaga 49136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 70; Significance: 1e-31; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 17 - 98
Target Start/End: Original strand, 39590706 - 39590787
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaacca 98  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  39590706 atgtatattacattttgattggttgatatcatgagagggtaaaataccctctaaataagagagggtaatctagaaaaaacca 39590787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 744152 - 744072
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaacc 97  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  744152 atgtatattacattttaattggttgatatcatgagagggtaaaataccctctaaataagagaggataatctagaaaaaacc 744072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 27018202 - 27018122
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaacc 97  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||||||    
T  27018202 atgtatattacattttgattggttgatatcataagagggtaaaataccttctaaataagagagggtaatctagaaaaaacc 27018122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 17 - 99
Target Start/End: Complemental strand, 822898 - 822816
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaaccaa 99  Q
    ||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  822898 atgtatattacattttgattggttgatgtcatgagagggtaaaataccctctaaataagagagggtaatctagaaaaaaccaa 822816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 17 - 99
Target Start/End: Complemental strand, 20544269 - 20544187
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaaccaa 99  Q
    |||||||||| ||||||||||||| ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  20544269 atgtatattatattttgattggttaatatcatgagagggtaaaataccctctaaataagagaggataatctagaaaaaaccaa 20544187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 37938572 - 37938494
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaa 95  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||||||||    
T  37938572 atgtatattacattttgattggttgatatcatgagagggtaaaataccctctaaataagagagggtaatctagaaaaaa 37938494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 17 - 98
Target Start/End: Original strand, 9593824 - 9593905
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaacca 98  Q
    |||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  9593824 atgtatattatattttgattggttgatatcatgagagggtaaaataccctctaaataagagagggtaatctagaaaaaacca 9593905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 17 - 98
Target Start/End: Original strand, 12501398 - 12501479
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaacca 98  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  12501398 atgtatattacattttgattggctgatatcatgagagggtaaaataccctctaaataagagagggtaatctagaaaaaacca 12501479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 30128705 - 30128626
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaac 96  Q
    |||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| ||| |||||||||||||||    
T  30128705 atgtatattacattttgattggttgatatcatgagagcgtaaaataccctctaaataagagagggtaatctagaaaaaac 30128626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 19666617 - 19666697
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaacc 97  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||| ||| ||| ||||||||||||||||    
T  19666617 atgtatattacattttgattggtttatatcatgagagggtaaaataccttctaaattagagagggtaatctagaaaaaacc 19666697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 42609984 - 42609905
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaacc 97  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| | | ||||||| ||||||||    
T  42609984 atgtatattacattttgattggttgatatcatgagagggtaaaataccctctaaataagagaag-taatctaaaaaaaacc 42609905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 31547544 - 31547465
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaac 96  Q
    |||||||||||||||||||||||||||||||| |  ||||||||||||||||||| |||| ||| |||||||||||||||    
T  31547544 atgtatattacattttgattggttgatatcatgaaggggtaaaataccctctaaacaagaaagggtaatctagaaaaaac 31547465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 91
Target Start/End: Original strand, 15527410 - 15527483
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaa 91  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| ||| ||||||||||    
T  15527410 atgtatattacattttgattggttgatatcataagagggt-aaataccctctaaacaagagagggtaatctagaa 15527483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 17 - 90
Target Start/End: Complemental strand, 9591685 - 9591612
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctaga 90  Q
    |||||||||||||||||||||||||||||||| |||||||||| ||||||||||| |||| ||| |||| ||||    
T  9591685 atgtatattacattttgattggttgatatcatgagagggtaaattaccctctaaacaagagagggtaatgtaga 9591612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 76
Target Start/End: Original strand, 745729 - 745788
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataaga 76  Q
    |||||||||||||||||||||||||||||||| |||||||||| ||||||||||| ||||    
T  745729 atgtatattacattttgattggttgatatcatgagagggtaaattaccctctaaacaaga 745788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 7179738 - 7179660
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaac 96  Q
    |||||||||||||||||||||||||||||||| | ||||  |||||||||||||| |||| ||| |||||||||||||||    
T  7179738 atgtatattacattttgattggttgatatcatga-aggggtaaataccctctaaacaagagagggtaatctagaaaaaac 7179660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 76
Target Start/End: Original strand, 37940117 - 37940176
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataaga 76  Q
    |||||||||||||||||||||||||||||||| |||||||||| ||||||||||| ||||    
T  37940117 atgtatattacattttgattggttgatatcatgagagggtaaattaccctctaaacaaga 37940176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 11986583 - 11986659
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaa 95  Q
    |||||||||||||||||||||||||||||||| ||| ||| ||||| ||||||||||||| ||||||||||| ||||||    
T  11986583 atgtatattacattttgattggttgatatcatgagatggt-aaata-cctctaaataagaaaggataatctaaaaaaaa 11986659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 17 - 71
Target Start/End: Complemental strand, 12499293 - 12499239
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaa 71  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  12499293 atgtatattacattttgattggttgatatcatgagagggtaaattaccctctaaa 12499239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 17 - 71
Target Start/End: Complemental strand, 19664837 - 19664783
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaa 71  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  19664837 atgtatattacattttgattggttgatatcatgagagggtaaattaccctctaaa 19664783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 34402146 - 34402222
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaa 95  Q
    |||||||||||||||||||||||||||||||||||||||| ||||| |||||||| |||| ||| |||| |||||||||    
T  34402146 atgtatattacattttgattggttgatatcataagagggt-aaatatcctctaaacaagagagg-taatttagaaaaaa 34402222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 27020212 - 27020277
Alignment:
Q  20 tatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataat 85  Q
    ||||||||||||||||||||||||||||| |||||||||| ||||||||||| |||| ||| ||||    
T  27020212 tatattacattttgattggttgatatcatgagagggtaaattaccctctaaacaagagagggtaat 27020277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 17 - 88
Target Start/End: Original strand, 37272707 - 37272777
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatcta 88  Q
    |||||||||||||||||||||| ||||||||| ||||||| |||||||||||||| || ||||| |||||||    
T  37272707 atgtatattacattttgattggctgatatcatgagagggt-aaataccctctaaacaaaatagggtaatcta 37272777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 17 - 76
Target Start/End: Original strand, 42612384 - 42612443
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataaga 76  Q
    ||||||||||||||||||||||||||||| || |||||||||| ||||||||||| ||||    
T  42612384 atgtatattacattttgattggttgatattatgagagggtaaattaccctctaaacaaga 42612443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 19505038 - 19505117
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaacc 97  Q
    ||||||||||||||||||||  |||||||||| ||||||| |||||||||||||| |||| ||| |||||||  |||||||    
T  19505038 atgtatattacattttgattaattgatatcatgagagggt-aaataccctctaaacaagagagggtaatctatgaaaaacc 19505117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 27552659 - 27552738
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaacc 97  Q
    |||||||||||||||||||||||||||||||| | ||||  |||||||||||||| || | ||  ||||||||||||||||    
T  27552659 atgtatattacattttgattggttgatatcatga-agggataaataccctctaaacaaaagagagtaatctagaaaaaacc 27552738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 29390975 - 29391046
Alignment:
Q  18 tgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctag 89  Q
    |||||||| |||||||||||||||| ||| | | |||||||||||||||||||| |||| ||| ||||||||    
T  29390975 tgtatattgcattttgattggttgaaatcttgaaagggtaaaataccctctaaacaagagagggtaatctag 29391046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 76
Target Start/End: Complemental strand, 37270318 - 37270260
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataaga 76  Q
    |||||||||||||||||||||||||||||||||| ||||| || ||||||||||| ||||    
T  37270318 atgtatattacattttgattggttgatatcataatagggt-aattaccctctaaacaaga 37270260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 76
Target Start/End: Complemental strand, 39588333 - 39588274
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataaga 76  Q
    ||||||||||||||||||||||||||||| || ||||| |||| ||||||||||| ||||    
T  39588333 atgtatattacattttgattggttgatattatgagaggataaattaccctctaaacaaga 39588274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 17 - 71
Target Start/End: Original strand, 20546319 - 20546373
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaa 71  Q
    |||||||| ||||||||||||||||||||||| |||| ||||| |||||||||||    
T  20546319 atgtatataacattttgattggttgatatcatgagagtgtaaattaccctctaaa 20546373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 6720879 - 6720955
Alignment:
Q  18 tgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaa 95  Q
    |||||||||||||||||||| |||||||| | | ||||  |||||||||||||| |||||||| |||| |||||||||    
T  6720879 tgtatattacattttgattgattgatatcttga-agggataaataccctctaaacaagatagggtaatgtagaaaaaa 6720955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 98
Target Start/End: Complemental strand, 9985438 - 9985358
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaacca 98  Q
    |||||||||||||||||||| ||||||||||| |  | || |||||||||||||| |||| ||| |||| ||||||||||||    
T  9985438 atgtatattacattttgattagttgatatcatgaatgagt-aaataccctctaaacaagagagggtaatttagaaaaaacca 9985358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 54
Target Start/End: Original strand, 11078428 - 11078465
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagg 54  Q
    ||||||||||||||||||||||||||||||||||||||    
T  11078428 atgtatattacattttgattggttgatatcataagagg 11078465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 58
Target Start/End: Complemental strand, 27550677 - 27550636
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaa 58  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  27550677 atgtatattacattttgattggttgatatcatgagagggtaa 27550636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 5099926 - 5099856
Alignment:
Q  18 tgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctag 89  Q
    ||||||||||||||||||||||||||||| | | ||||| |||||||| ||||| |||| ||| ||||||||    
T  5099926 tgtatattacattttgattggttgatatcttgaaagggt-aaataccccctaaacaagagagggtaatctag 5099856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 97
Target Start/End: Original strand, 15527270 - 15527348
Alignment:
Q  18 tgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaacc 97  Q
    ||||||||||||||||||||||||||||| | | ||||| |||||||||||| | |||| ||  |||| |||||||||||    
T  15527270 tgtatattacattttgattggttgatatcttgaaagggt-aaataccctctagacaagagagagtaatgtagaaaaaacc 15527348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 76
Target Start/End: Complemental strand, 34401589 - 34401531
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataaga 76  Q
    |||||||||||||||||||||||||||||||| |||| || || ||||||||||| ||||    
T  34401589 atgtatattacattttgattggttgatatcatgagagagt-aattaccctctaaacaaga 34401531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 17 - 71
Target Start/End: Original strand, 7181206 - 7181259
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaa 71  Q
    |||||| ||||||||||||||||||||||||| ||||||| || |||||||||||    
T  7181206 atgtatgttacattttgattggttgatatcatgagagggt-aattaccctctaaa 7181259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 58
Target Start/End: Original strand, 9987447 - 9987488
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaa 58  Q
    |||||||||||||||||||||||||||||||| | |||||||    
T  9987447 atgtatattacattttgattggttgatatcatgatagggtaa 9987488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 58
Target Start/End: Original strand, 34663569 - 34663610
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaa 58  Q
    ||||||| |||||||||||||||||||||||| |||||||||    
T  34663569 atgtatactacattttgattggttgatatcatgagagggtaa 34663610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 48
Target Start/End: Original strand, 13305594 - 13305625
Alignment:
Q  17 atgtatattacattttgattggttgatatcat 48  Q
    ||||||||||||||||||||||||||||||||    
T  13305594 atgtatattacattttgattggttgatatcat 13305625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 15524189 - 15524119
Alignment:
Q  18 tgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctag 89  Q
    ||||||||||||||||||||||||||||| | | ||||| ||||| |||||||| |||| | | ||||||||    
T  15524189 tgtatattacattttgattggttgatatcttgaaagggt-aaatatcctctaaacaagagaaggtaatctag 15524119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 29389040 - 29388962
Alignment:
Q  18 tgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaac 96  Q
    |||||||| |||||||||||||||| ||| | | |||||||||||  ||||||| |||| ||  |||| ||||||||||    
T  29389040 tgtatattgcattttgattggttgaaatcttgaaagggtaaaatattctctaaacaagagagagtaatgtagaaaaaac 29388962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 59
Target Start/End: Complemental strand, 6719553 - 6719512
Alignment:
Q  18 tgtatattacattttgattggttgatatcataagagggtaaa 59  Q
    ||||||||||||||||||||||||||||| | | ||||||||    
T  6719553 tgtatattacattttgattggttgatatcttgaaagggtaaa 6719512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 53
Target Start/End: Complemental strand, 11984549 - 11984516
Alignment:
Q  20 tatattacattttgattggttgatatcataagag 53  Q
    ||||||||||||||||||||||||||||| ||||    
T  11984549 tatattacattttgattggttgatatcatgagag 11984516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 59
Target Start/End: Complemental strand, 34858021 - 34857980
Alignment:
Q  18 tgtatattacattttgattggttgatatcataagagggtaaa 59  Q
    ||||||||||||||||||||||||||||| | | ||||||||    
T  34858021 tgtatattacattttgattggttgatatcttgaaagggtaaa 34857980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 3033144 - 3033069
Alignment:
Q  18 tgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaa 94  Q
    |||| |||||||||||||||||||||||  | | ||||  |||||||||||||| |||| ||| |||| ||||||||    
T  3033144 tgtacattacattttgattggttgatattttga-aggggtaaataccctctaaacaagagagggtaatgtagaaaaa 3033069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 45
Target Start/End: Original strand, 31552286 - 31552314
Alignment:
Q  17 atgtatattacattttgattggttgatat 45  Q
    |||||||||||||||||||||||||||||    
T  31552286 atgtatattacattttgattggttgatat 31552314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 70; Significance: 1e-31; HSPs: 95)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 17 - 98
Target Start/End: Original strand, 23022006 - 23022087
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaacca 98  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  23022006 atgtatattacattttgattggttgatatcatgagagggtaaaataccctctaaataagagagggtaatctagaaaaaacca 23022087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 17 - 98
Target Start/End: Complemental strand, 27330193 - 27330112
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaacca 98  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  27330193 atgtatattacattttgattggttgatatcatgagagggtaaaataccctctaaataagagagggtaatctagaaaaaacca 27330112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 29894738 - 29894818
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaacc 97  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||||||||||    
T  29894738 atgtatattacattttgattggttgatatcatgagagggtaaaatactctctaaataagagaggataatctagaaaaaacc 29894818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 17 - 101
Target Start/End: Original strand, 40908470 - 40908554
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaaccaatt 101  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||| ||||||||||||    
T  40908470 atgtatattacattttgattggttgatatcatgagagggtaaaataccctctaaataagagagggtaatctaaaaaaaaccaatt 40908554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 47911031 - 47910953
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaa 95  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| ||||||||||||||||||    
T  47911031 atgtatattacattttgattggttgatatcatgagagggtaaattaccctctaaataagagaggataatctagaaaaaa 47910953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 20 - 97
Target Start/End: Original strand, 13243557 - 13243634
Alignment:
Q  20 tatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaacc 97  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  13243557 tatattacattttgattggttgatatcatgagagggtaaaataccctctaaataagagagggtaatctagaaaaaacc 13243634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 22606826 - 22606906
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaacc 97  Q
    |||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  22606826 atgtatattatattttgattggttgatataataagagggtaaaataccctctaaataagagaggataatctaaaaaaaacc 22606906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 41695994 - 41695914
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaacc 97  Q
    |||||||||||||||||||||||||||||||| |||| |||||||| ||||||||||||||||| ||||||||||||||||    
T  41695994 atgtatattacattttgattggttgatatcatgagagagtaaaataacctctaaataagatagggtaatctagaaaaaacc 41695914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 20 - 96
Target Start/End: Complemental strand, 45051814 - 45051738
Alignment:
Q  20 tatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaac 96  Q
    ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| |||||||||||||||||||    
T  45051814 tatattacattttgattggttgatatcatgagagggtaaaatatcctctaaataagagaggataatctagaaaaaac 45051738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 53583685 - 53583765
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaacc 97  Q
    |||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| ||| ||||||||||||||||    
T  53583685 atgtatattacattttgattggttgatatcatgagaggataaaataccctctaaataagagagggtaatctagaaaaaacc 53583765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 23 - 98
Target Start/End: Original strand, 11123632 - 11123707
Alignment:
Q  23 attacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaacca 98  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  11123632 attacattttgattggttgatatcatgagagggtaaaataccctctaaataagagagggtaatctagaaaaaacca 11123707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 37218247 - 37218168
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaac 96  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||| |||||||    
T  37218247 atgtatattacattttgattggttgatatcatgagagggtaaaataccctctaaataagagagggtaatctaaaaaaaac 37218168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 27128150 - 27128228
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaa 95  Q
    |||||||||||||||||||||||||||||||| | || |||||||||||||||||||||||||| ||||||||||||||    
T  27128150 atgtatattacattttgattggttgatatcatgatagagtaaaataccctctaaataagatagggtaatctagaaaaaa 27128228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 37787244 - 37787322
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaa 95  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| ||||||| ||||||    
T  37787244 atgtatattacattttgattggtttatatcataagagggtaaaataccctctaaataagagagggtaatctaaaaaaaa 37787322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 44841304 - 44841226
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaa 95  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| | | ||||||||||||||    
T  44841304 atgtatattacattttgattggttgatatcatgagagggtaaaataccctctaaataagagacggtaatctagaaaaaa 44841226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 50546551 - 50546473
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaa 95  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| ||| ||||||||||||||    
T  50546551 atgtatattacattttgattggttgatatcatgagagggtaaaataccctataaataagagagggtaatctagaaaaaa 50546473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 20 - 97
Target Start/End: Complemental strand, 8849829 - 8849752
Alignment:
Q  20 tatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaacc 97  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||| ||||||||||||    
T  8849829 tatattacattttgattggttgatatcatgagatggtaaaataccctctaaataagatagggtaacctagaaaaaacc 8849752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 2219957 - 2220037
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaacc 97  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| ||| ||||||| ||||||||    
T  2219957 atgtatattacattttgattggttgatatcatgagagggtaaaatactctctaaataagagagggtaatctaaaaaaaacc 2220037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 15082789 - 15082709
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaacc 97  Q
    ||||||||||||||||||||| || ||||||| ||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  15082789 atgtatattacattttgattgatttatatcatgagagggtaaaataccttctaaataagagaggataatctagaaaaaacc 15082709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 4230926 - 4230848
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaa 95  Q
    ||||||||||||| |||||| ||||||||||| ||||||||||||||||||||||||||| ||| ||||||||||||||    
T  4230926 atgtatattacatgttgattagttgatatcatgagagggtaaaataccctctaaataagagagggtaatctagaaaaaa 4230848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 30438345 - 30438267
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaa 95  Q
    |||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||||||| ||| ||||||| ||||||    
T  30438345 atgtatattacattttaatttgttgatatcatgagagggtaaaataccctctaaataagagagggtaatctaaaaaaaa 30438267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 41103705 - 41103785
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaacc 97  Q
    |||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||||||| | | | ||||||||||||||    
T  41103705 atgtatattacattttaatttgttgatatcatgagagggtaaaataccctctaaataagagatggtgatctagaaaaaacc 41103785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 85
Target Start/End: Original strand, 45172695 - 45172763
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataat 85  Q
    |||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| ||| ||||    
T  45172695 atgtatattacattttgattggttgatatcatgagagagtaaaataccctctaaataagagagggtaat 45172763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 50610578 - 50610658
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaacc 97  Q
    |||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| | ||  ||||||| ||||||||    
T  50610578 atgtatattacattttgattggttgatatcattagaggataaaataccctctaaataaaagagagtaatctaaaaaaaacc 50610658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 52745734 - 52745654
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaacc 97  Q
    ||||||||||||||||||||| |||||||||||||||||||   |||||||||||||||| ||| | ||||||||||||||    
T  52745734 atgtatattacattttgattgattgatatcataagagggtattttaccctctaaataagagagggtgatctagaaaaaacc 52745654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 17 - 84
Target Start/End: Original strand, 15084704 - 15084771
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataa 84  Q
    |||||||||||||||||||||||||||||||| |||||||||| ||||||||||| |||| |||||||    
T  15084704 atgtatattacattttgattggttgatatcatgagagggtaaattaccctctaaacaagagaggataa 15084771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 17 - 84
Target Start/End: Complemental strand, 27320932 - 27320865
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataa 84  Q
    |||||||||||||||||||||||||||||||| |||||||||| ||||||||||| |||| |||||||    
T  27320932 atgtatattacattttgattggttgatatcatgagagggtaaattaccctctaaacaagagaggataa 27320865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 17 - 76
Target Start/End: Complemental strand, 53845206 - 53845147
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataaga 76  Q
    |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||    
T  53845206 atgtatattacattttgattggttgatatcatgagagggtaaattaccctctaaataaga 53845147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 55219863 - 55219940
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaa 95  Q
    ||||||||||| |||| ||||||||||||||| ||||||| ||||||||||||||||||| ||| ||||||||||||||    
T  55219863 atgtatattactttttaattggttgatatcatgagagggt-aaataccctctaaataagagagggtaatctagaaaaaa 55219940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 11121152 - 11121080
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctag 89  Q
    |||||||||||||||||||||||||||||||| |||||||||| ||||||||||| |||| ||| ||| ||||    
T  11121152 atgtatattacattttgattggttgatatcatgagagggtaaattaccctctaaacaagagagggtaacctag 11121080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 18763895 - 18763974
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaacc 97  Q
    ||||||||||||| |||||||||||||||||| ||||| | ||||||||||||||||||| | | ||||||||||||||||    
T  18763895 atgtatattacatcttgattggttgatatcatgagaggat-aaataccctctaaataagagaaggtaatctagaaaaaacc 18763974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 17 - 85
Target Start/End: Original strand, 30043624 - 30043692
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataat 85  Q
    |||||||||||||||||||||||||||||||| |||||||||| ||||||||||| |||| ||| ||||    
T  30043624 atgtatattacattttgattggttgatatcatgagagggtaaattaccctctaaacaagagagggtaat 30043692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 76
Target Start/End: Complemental strand, 2217951 - 2217892
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataaga 76  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||| |||||||||||    
T  2217951 atgtatattacattttgattggttgatatcatgagagggtaaattaccttctaaataaga 2217892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 76
Target Start/End: Complemental strand, 13213366 - 13213307
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataaga 76  Q
    |||||||||||||||||||||||||||||||| |||||||||| ||||||||||| ||||    
T  13213366 atgtatattacattttgattggttgatatcatgagagggtaaattaccctctaaacaaga 13213307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 76
Target Start/End: Complemental strand, 23019758 - 23019699
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataaga 76  Q
    ||||||||||||||| |||||||||||||||| |||||||||| ||||||||||||||||    
T  23019758 atgtatattacatttcgattggttgatatcatgagagggtaaattaccctctaaataaga 23019699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 76
Target Start/End: Complemental strand, 37785359 - 37785300
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataaga 76  Q
    |||||||||||||||||||||||||||||||| |||||||||| ||||||||||| ||||    
T  37785359 atgtatattacattttgattggttgatatcatgagagggtaaattaccctctaaacaaga 37785300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 76
Target Start/End: Original strand, 44843331 - 44843390
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataaga 76  Q
    |||||||||||||||||||||||||||||||| |||||||||| ||||||||||| ||||    
T  44843331 atgtatattacattttgattggttgatatcatgagagggtaaattaccctctaaacaaga 44843390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 17 - 71
Target Start/End: Original strand, 27239195 - 27239249
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaa 71  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  27239195 atgtatattacattttgattggttgatatcatgagagggtaaattaccctctaaa 27239249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 20 - 98
Target Start/End: Complemental strand, 31311742 - 31311665
Alignment:
Q  20 tatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaacca 98  Q
    ||||||||||||||||||||| ||||||| ||||||| |||||| ||||||| |||| ||| |||||||||||||||||    
T  31311742 tatattacattttgattggtttatatcatgagagggt-aaatacgctctaaacaagagagggtaatctagaaaaaacca 31311665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 38698790 - 38698867
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaa 95  Q
    |||||||||||||||||||||||||||||||| ||||||| ||||| |||||||| |||| ||| ||||||| ||||||    
T  38698790 atgtatattacattttgattggttgatatcatgagagggt-aaatatcctctaaacaagagagggtaatctaaaaaaaa 38698867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 55413155 - 55413232
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaa 95  Q
    |||||||||||||||||||||||||||||||||||||| | ||||||||  |||| |||| ||| ||||||||||||||    
T  55413155 atgtatattacattttgattggttgatatcataagaggat-aaataccccttaaacaagaaagggtaatctagaaaaaa 55413232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 24 - 97
Target Start/End: Complemental strand, 51720932 - 51720860
Alignment:
Q  24 ttacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaacc 97  Q
    |||||||||||||||||||| |||| |||||||||| ||| |||||||||||| ||| ||||||||||||||||    
T  51720932 ttacattttgattggttgatttcatgagagggtaaa-tactctctaaataagagagggtaatctagaaaaaacc 51720860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 17 - 76
Target Start/End: Original strand, 4233181 - 4233240
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataaga 76  Q
    ||||||||||||||||||||||||||||| || |||||||||| ||||||||||| ||||    
T  4233181 atgtatattacattttgattggttgatattatgagagggtaaattaccctctaaacaaga 4233240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 17 - 76
Target Start/End: Complemental strand, 22604791 - 22604732
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataaga 76  Q
    ||||||||||||||||||||| |||||||||| |||||||||| ||||||||||| ||||    
T  22604791 atgtatattacattttgattgattgatatcatgagagggtaaattaccctctaaacaaga 22604732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 17 - 76
Target Start/End: Complemental strand, 42825935 - 42825876
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataaga 76  Q
    |||||||||||||||||| ||||||||||||| |||||||||| ||||||||||| ||||    
T  42825935 atgtatattacattttgactggttgatatcatgagagggtaaattaccctctaaacaaga 42825876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 53776479 - 53776402
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaa 95  Q
    |||||||||||||||| ||||||||||||||| ||| ||| |||||||  |||||||| | ||||||||||||||||||    
T  53776479 atgtatattacattttaattggttgatatcatgagatggt-aaatacctcctaaataaaagaggataatctagaaaaaa 53776402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 17 - 90
Target Start/End: Complemental strand, 43338294 - 43338222
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctaga 90  Q
    |||||||||||||||||||||||||||||||| ||||||| || ||||||||||| ||||| || |||| ||||    
T  43338294 atgtatattacattttgattggttgatatcatgagagggt-aattaccctctaaacaagattgggtaatgtaga 43338222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 50536032 - 50535960
Alignment:
Q  19 gtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaa 92  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||||| |||| |||| ||| |||| ||||||    
T  50536032 gtatattacattttgattggttgatatcatgagagggt-aaataccctataaacaagagagggtaatttagaaa 50535960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 54410687 - 54410763
Alignment:
Q  18 tgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaa 95  Q
    ||||||||||||||||||||||||||||| |   ||||  |||||||||||||| |||||||| ||||||||||||||    
T  54410687 tgtatattacattttgattggttgatatc-ttttaggggtaaataccctctaaacaagatagggtaatctagaaaaaa 54410763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 76
Target Start/End: Original strand, 6177347 - 6177403
Alignment:
Q  20 tatattacattttgattggttgatatcataagagggtaaaataccctctaaataaga 76  Q
    ||||||||||||||||| ||||||||||| |||||||||| ||||||||||| ||||    
T  6177347 tatattacattttgattagttgatatcatgagagggtaaattaccctctaaacaaga 6177403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 98
Target Start/End: Complemental strand, 50935538 - 50935459
Alignment:
Q  18 tgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaacca 98  Q
    ||||||||| ||||||||||||||||||| | | ||||| |||||||||||||| |||| ||| |||| ||||||||||||    
T  50935538 tgtatattatattttgattggttgatatcttgaaagggt-aaataccctctaaacaagagagggtaatgtagaaaaaacca 50935459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 20 - 91
Target Start/End: Complemental strand, 3890847 - 3890777
Alignment:
Q  20 tatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaa 91  Q
    ||||||||||||||||||||||||||||| | ||||  |||||| ||||||| |||||||| ||||||||||    
T  3890847 tatattacattttgattggttgatatcatga-aggggtaaatactctctaaacaagatagggtaatctagaa 3890777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 76
Target Start/End: Original strand, 8852283 - 8852342
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataaga 76  Q
    |||||||||||||||||||||||||||||||| |||| ||||| || |||||||| ||||    
T  8852283 atgtatattacattttgattggttgatatcatgagagagtaaattatcctctaaacaaga 8852342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 22977905 - 22977835
Alignment:
Q  18 tgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctag 89  Q
    ||||||||||||||||||||||||||||| ||| ||||| |||||||| ||||| |||| ||| ||||||||    
T  22977905 tgtatattacattttgattggttgatatcttaaaagggt-aaataccccctaaacaagagagggtaatctag 22977835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 76
Target Start/End: Complemental strand, 27126119 - 27126060
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataaga 76  Q
    |||||||||||||||| |||||||||||||||||||| ||||| || |||||||| ||||    
T  27126119 atgtatattacattttaattggttgatatcataagagagtaaattatcctctaaacaaga 27126060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 20 - 95
Target Start/End: Complemental strand, 30361718 - 30361644
Alignment:
Q  20 tatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaa 95  Q
    ||||||||||||| ||||||||||||||| | ||||  ||||||| |||||| |||||||| ||||||||||||||    
T  30361718 tatattacattttaattggttgatatcatta-agggataaataccttctaaacaagatagggtaatctagaaaaaa 30361644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 39129135 - 39129070
Alignment:
Q  18 tgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataat 85  Q
    ||||||||||||||||||||||||||||| ||| ||||| |||||||||||||| |||||||| ||||    
T  39129135 tgtatattacattttgattggttgatatcttaa-agggt-aaataccctctaaacaagatagggtaat 39129070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 40906074 - 40906007
Alignment:
Q  18 tgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataat 85  Q
    ||||||||||||||||||||||| ||||||  |||||||||| ||||||||||| |||| ||| ||||    
T  40906074 tgtatattacattttgattggttaatatcacgagagggtaaattaccctctaaacaagagagggtaat 40906007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 76
Target Start/End: Complemental strand, 41101584 - 41101525
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataaga 76  Q
    ||||||||||||||||||||| |||||||||| ||| |||||| || |||||||||||||    
T  41101584 atgtatattacattttgattgattgatatcatgagaaggtaaattatcctctaaataaga 41101525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 24 - 90
Target Start/End: Original strand, 2229437 - 2229502
Alignment:
Q  24 ttacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctaga 90  Q
    ||||||||||||||||||||||| ||| ||| |||| || |||||||| ||||||||||||||||||    
T  2229437 ttacattttgattggttgatatcttaaaaggataaa-tatcctctaaacaagataggataatctaga 2229502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 58
Target Start/End: Original strand, 30440419 - 30440460
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaa 58  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  30440419 atgtatattacattttgattggttgatatcatgagagggtaa 30440460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 58
Target Start/End: Complemental strand, 38235419 - 38235378
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaa 58  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  38235419 atgtatattacattttgattggttgatatcatgagagggtaa 38235378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 37178321 - 37178242
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaacc 97  Q
    |||||||||||||||||||||||||||||||| | ||||   ||||| ||||||| |||| ||| |||| |||||||||||    
T  37178321 atgtatattacattttgattggttgatatcatga-aggggttaatacgctctaaacaagagagggtaatttagaaaaaacc 37178242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 76
Target Start/End: Original strand, 37220242 - 37220298
Alignment:
Q  20 tatattacattttgattggttgatatcataagagggtaaaataccctctaaataaga 76  Q
    ||||||||||||||||||||||||||||| |||  ||||| ||||||||||| ||||    
T  37220242 tatattacattttgattggttgatatcatgagatagtaaattaccctctaaacaaga 37220298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 42827970 - 42828049
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaacc 97  Q
    |||||||||| | |||||||| |||||||||| |||||||||| ||||||||||| || | | | ||||||||||||||||    
T  42827970 atgtatattatagtttgattgattgatatcatgagagggtaaa-taccctctaaacaaaagatggtaatctagaaaaaacc 42828049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 50938508 - 50938579
Alignment:
Q  18 tgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctaga 90  Q
    ||||||||||||||| ||||||||||||| | | ||||| ||||||| |||||| |||| |||||||||||||    
T  50938508 tgtatattacattttaattggttgatatcttgaaagggt-aaataccttctaaacaagagaggataatctaga 50938579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 97
Target Start/End: Complemental strand, 7041646 - 7041569
Alignment:
Q  18 tgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaacc 97  Q
    ||||||||||||||||||||||||||||| | | ||| | ||||| |||||||| |||| |||||||| |||||||||||    
T  7041646 tgtatattacattttgattggttgatatcttgaaaggat-aaata-cctctaaacaagagaggataatgtagaaaaaacc 7041569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 76
Target Start/End: Complemental strand, 18410132 - 18410073
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataaga 76  Q
    |||||||||||||||||||||||||||||||| ||||  |||| || ||| |||||||||    
T  18410132 atgtatattacattttgattggttgatatcatgagagaataaattatcctttaaataaga 18410073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 32001216 - 32001286
Alignment:
Q  18 tgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctag 89  Q
    ||||||||||||||||||||||||||||  | | ||||| |||||||| |||||||||| ||| ||||||||    
T  32001216 tgtatattacattttgattggttgatattttgaaagggt-aaataccccctaaataagagagggtaatctag 32001286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 76
Target Start/End: Complemental strand, 45169895 - 45169836
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataaga 76  Q
    |||||||||||||||||||| |||||||| || |||| ||||| ||||||||||| ||||    
T  45169895 atgtatattacattttgattagttgatattatgagagagtaaattaccctctaaaaaaga 45169836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 76
Target Start/End: Original strand, 47913088 - 47913147
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataaga 76  Q
    |||||||||| ||||||||||||||||||| | |||| ||||| ||||||||||| ||||    
T  47913088 atgtatattatattttgattggttgatatcttgagagagtaaattaccctctaaaaaaga 47913147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 76
Target Start/End: Original strand, 50548627 - 50548686
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataaga 76  Q
    |||||||||||||||||||||||||||||||| ||| | |||| |||| |||||| ||||    
T  50548627 atgtatattacattttgattggttgatatcatgagatgataaattaccatctaaacaaga 50548686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 10825826 - 10825749
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaa 95  Q
    |||||||||||||||| ||||||| ||||||| ||||||  |||||||| ||||| |||| ||| ||||||| ||||||    
T  10825826 atgtatattacattttcattggttaatatcatgagaggg-caaataccccctaaacaagagagggtaatctaaaaaaaa 10825749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 98
Target Start/End: Complemental strand, 36465661 - 36465584
Alignment:
Q  20 tatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaacca 98  Q
    |||||| |||||||||||||||||||  | | | ||| |||||||||||||| |||| ||| |||||||||||||||||    
T  36465661 tatattgcattttgattggttgatatgttgaaaaggt-aaataccctctaaacaagagagggtaatctagaaaaaacca 36465584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 78
Target Start/End: Original strand, 41698227 - 41698285
Alignment:
Q  20 tatattacattttgattggttgatatcataagagggtaaaataccctctaaataagata 78  Q
    ||||||||||||||||||||||||||||| ||||| |||  |||| |||||| ||||||    
T  41698227 tatattacattttgattggttgatatcatgagaggataagttaccttctaaacaagata 41698285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 182 - 248
Target Start/End: Original strand, 50717679 - 50717744
Alignment:
Q  182 attggtgtttgcgtatatttttagttcatttgtaagtgttatcttactattttttccttttctctcc 248  Q
    |||||||||||| ||| |||||||||| |||||||||||||||||| ||||  ||||||||| ||||    
T  50717679 attggtgtttgcatatttttttagttc-tttgtaagtgttatcttattattgattccttttcactcc 50717744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 182 - 248
Target Start/End: Complemental strand, 50795169 - 50795104
Alignment:
Q  182 attggtgtttgcgtatatttttagttcatttgtaagtgttatcttactattttttccttttctctcc 248  Q
    |||||||||||| ||| |||||||||| |||||||||||||||||| ||||  ||||||||| ||||    
T  50795169 attggtgtttgcatatttttttagttc-tttgtaagtgttatcttattattgattccttttcactcc 50795104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 58
Target Start/End: Complemental strand, 16463829 - 16463788
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaa 58  Q
    |||||||||||||||||||||||||||||| | |||||||||    
T  16463829 atgtatattacattttgattggttgatatcttgagagggtaa 16463788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 58
Target Start/End: Original strand, 18412098 - 18412139
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaa 58  Q
    |||||||||| ||||||||||||||||||||| |||||||||    
T  18412098 atgtatattatattttgattggttgatatcatgagagggtaa 18412139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 58
Target Start/End: Original strand, 22429010 - 22429051
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaa 58  Q
    |||||||||||||||||||||||||||||| |||||| ||||    
T  22429010 atgtatattacattttgattggttgatatcgtaagagtgtaa 22429051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 58
Target Start/End: Original strand, 51722956 - 51722997
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaa 58  Q
    |||||||||||||||| ||||||| |||||||||||||||||    
T  51722956 atgtatattacattttaattggtttatatcataagagggtaa 51722997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 98
Target Start/End: Original strand, 22981388 - 22981467
Alignment:
Q  18 tgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaacca 98  Q
    |||||||||| |||||||||||||||||| | | ||||  ||||| |||||||| |||| ||| |||| ||||||||||||    
T  22981388 tgtatattacgttttgattggttgatatcttga-aggggtaaatatcctctaaacaagacagggtaatgtagaaaaaacca 22981467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 58
Target Start/End: Complemental strand, 29864559 - 29864519
Alignment:
Q  18 tgtatattacattttgattggttgatatcataagagggtaa 58  Q
    |||||||||||||||||||||||||||| || |||||||||    
T  29864559 tgtatattacattttgattggttgatattatgagagggtaa 29864519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 65
Target Start/End: Complemental strand, 37523115 - 37523067
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccc 65  Q
    |||||||||||||||| ||||||||||||||| ||||| |||| |||||    
T  37523115 atgtatattacattttaattggttgatatcatgagaggataaattaccc 37523067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 54409437 - 54409366
Alignment:
Q  18 tgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctaga 90  Q
    ||||||||||||||||||||||| ||||| | | | ||| |||||||| ||||| |||||||| |||||||||    
T  54409437 tgtatattacattttgattggtttatatcttgaaaaggt-aaataccccctaaacaagatagggtaatctaga 54409366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 59
Target Start/End: Complemental strand, 22731449 - 22731410
Alignment:
Q  20 tatattacattttgattggttgatatcataagagggtaaa 59  Q
    ||||||||||||||||||||||||||||| || |||||||    
T  22731449 tatattacattttgattggttgatatcatgagggggtaaa 22731410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 97
Target Start/End: Complemental strand, 48071800 - 48071722
Alignment:
Q  18 tgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaacc 97  Q
    ||||||||| ||||||||||||||||||| ||| ||||| |||||||  ||||| |||| ||| |||| || ||||||||    
T  48071800 tgtatattatattttgattggttgatatcttaaaagggt-aaatacctcctaaacaagagagggtaatgtaaaaaaaacc 48071722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 55136622 - 55136691
Alignment:
Q  18 tgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctag 89  Q
    ||||||||||||||||||||||||||||| ||| ||| | |||||||| ||||| |||| ||| ||||||||    
T  55136622 tgtatattacattttgattggttgatatcttaaaaggat-aaataccc-ctaaacaagagagggtaatctag 55136691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 58
Target Start/End: Original strand, 30363876 - 30363914
Alignment:
Q  20 tatattacattttgattggttgatatcataagagggtaa 58  Q
    ||||||||||||||||| ||||||||||| |||||||||    
T  30363876 tatattacattttgatttgttgatatcatgagagggtaa 30363914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 58
Target Start/End: Original strand, 37182415 - 37182453
Alignment:
Q  20 tatattacattttgattggttgatatcataagagggtaa 58  Q
    |||||||||||||||||| |||||||||| |||||||||    
T  37182415 tatattacattttgattgattgatatcatgagagggtaa 37182453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 54
Target Start/End: Complemental strand, 40423577 - 40423540
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagg 54  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  40423577 atgtatattacattttgattggtttatatcatgagagg 40423540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 59
Target Start/End: Original strand, 43863162 - 43863203
Alignment:
Q  18 tgtatattacattttgattggttgatatcataagagggtaaa 59  Q
    |||||||| |||||||||||||||||||| ||| ||||||||    
T  43863162 tgtatattgcattttgattggttgatatcttaaaagggtaaa 43863203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 54
Target Start/End: Original strand, 53778441 - 53778478
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagg 54  Q
    ||||||||||||||||||||||||||||| || |||||    
T  53778441 atgtatattacattttgattggttgatattatgagagg 53778478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 46
Target Start/End: Original strand, 42167538 - 42167566
Alignment:
Q  18 tgtatattacattttgattggttgatatc 46  Q
    |||||||||||||||||||||||||||||    
T  42167538 tgtatattacattttgattggttgatatc 42167566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 46
Target Start/End: Complemental strand, 43357927 - 43357899
Alignment:
Q  18 tgtatattacattttgattggttgatatc 46  Q
    |||||||||||||||||||||||||||||    
T  43357927 tgtatattacattttgattggttgatatc 43357899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 69; Significance: 4e-31; HSPs: 62)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 16273988 - 16273908
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaacc 97  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  16273988 atgtatattacattttgattggttgatatcatgagagggtaaaataccctctaaataagagagggtaatctagaaaaaacc 16273908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 17 - 100
Target Start/End: Original strand, 4861902 - 4861985
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaaccaat 100  Q
    |||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| ||| |||||||||||||||||||    
T  4861902 atgtatattacattttgattggttgatatcatgagagagtaaaataccctctaaataagagagggtaatctagaaaaaaccaat 4861985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 44456975 - 44456896
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaac 96  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| |||||||||||||||    
T  44456975 atgtatattacattttgattggttgatatcatgagagggtaaaataccctctaaataagagagggtaatctagaaaaaac 44456896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 3412754 - 3412676
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaa 95  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  3412754 atgtatattatattttgattggttgatatcataagagggtaaaataccctctaaataagagagggtaatctagaaaaaa 3412676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 41338272 - 41338352
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaacc 97  Q
    |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| ||| ||||||||||||||||    
T  41338272 atgtatattacattttgattggttgatatcatgagaaggtaaaataccctctaaataagagagggtaatctagaaaaaacc 41338352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 17 - 102
Target Start/End: Complemental strand, 723564 - 723479
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaaccaattt 102  Q
    ||||||||||| |||| ||||||||||||||| ||||||||||||||||||||||||||| ||| |||||||||||||||| ||||    
T  723564 atgtatattacgtttttattggttgatatcatgagagggtaaaataccctctaaataagagagggtaatctagaaaaaacctattt 723479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 17 - 98
Target Start/End: Complemental strand, 38179739 - 38179658
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaacca 98  Q
    ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||| |||||||||    
T  38179739 atgtatattacgttttgattggttgatatcatgagagggtaaaataccctctaaataagagagggtaatctaaaaaaaacca 38179658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 17 - 101
Target Start/End: Original strand, 48684568 - 48684651
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaaccaatt 101  Q
    |||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||| ||| ||||||||||||||||||||    
T  48684568 atgtatattacattttgattggttgatatcataaaagggt-aaatatcctctaaataagagagggtaatctagaaaaaaccaatt 48684651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 20 - 95
Target Start/End: Complemental strand, 40013698 - 40013623
Alignment:
Q  20 tatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaa 95  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| ||| ||||||||||||||    
T  40013698 tatattacattttgattggttgatatcatgagagagtaaaataccctctaaataagagagggtaatctagaaaaaa 40013623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 20 - 95
Target Start/End: Complemental strand, 46553510 - 46553435
Alignment:
Q  20 tatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaa 95  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| | ||||||||||| ||||||    
T  46553510 tatattacattttgattggttgatatcatgagagggtaaaataccctctaaataaaagaggataatctaaaaaaaa 46553435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 20 - 95
Target Start/End: Complemental strand, 47907022 - 47906947
Alignment:
Q  20 tatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaa 95  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||  |||||||||||||    
T  47907022 tatattacattttgattggttgatatcatgagagggtaaaataccctctaaataagagagggaaatctagaaaaaa 47906947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 41856350 - 41856272
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaa 95  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| | ||| ||||||||||||||    
T  41856350 atgtatattacattttgattggttgatatcatgagagggtaaaataccctctatataaaagagggtaatctagaaaaaa 41856272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 21 - 97
Target Start/End: Original strand, 20122320 - 20122396
Alignment:
Q  21 atattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaacc 97  Q
    ||||||||||||||| ||||||||| || ||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  20122320 atattacattttgataggttgatataatgagagggtaaaataccctctaaataagagagggtaatctagaaaaaacc 20122396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 48950311 - 48950231
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaacc 97  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||||| || |||||| ||| ||||||||||||||||    
T  48950311 atgtatattacattttgattggttaatatcatgagagggtaaaataccctttatataagagagggtaatctagaaaaaacc 48950231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 9659088 - 9659011
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaa 95  Q
    |||||||||||||||||||||||| ||||||| ||||||| |||||||||||||| |||||||| ||||||||||||||    
T  9659088 atgtatattacattttgattggtttatatcatgagagggt-aaataccctctaaacaagatagggtaatctagaaaaaa 9659011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 21817351 - 21817429
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaacc 97  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||| |||| ||||| |||||    
T  21817351 atgtatattacattttgattggttgatatcat--gagggtaaaataccctctaaataagagagggtaatatagaagaaacc 21817429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 4657092 - 4657018
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaacc 97  Q
    ||||||||||||||||||||||||||||||||      |||||||||||||||||||||| ||| ||||||||||||||||    
T  4657092 atgtatattacattttgattggttgatatcat------gtaaaataccctctaaataagagagggtaatctagaaaaaacc 4657018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 23592617 - 23592538
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaacc 97  Q
    ||||||||||||||||||||| |||||||||| | ||| |||| |||||||||||||||| ||| ||||||||||||||||    
T  23592617 atgtatattacattttgattgattgatatcatgaaaggataaa-taccctctaaataagagagggtaatctagaaaaaacc 23592538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 20 - 100
Target Start/End: Complemental strand, 41287629 - 41287550
Alignment:
Q  20 tatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaaccaat 100  Q
    ||||||||||||||||| ||||||||||| ||||||| |||||||||||||| |||| ||| | |||||||||||||||||    
T  41287629 tatattacattttgattagttgatatcatgagagggt-aaataccctctaaacaagagagggttatctagaaaaaaccaat 41287550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 76
Target Start/End: Original strand, 16277665 - 16277724
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataaga 76  Q
    |||||||||||||||||||||||||||||||| |||||||||| ||||||||||| ||||    
T  16277665 atgtatattacattttgattggttgatatcatgagagggtaaattaccctctaaacaaga 16277724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 76
Target Start/End: Complemental strand, 20119952 - 20119893
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataaga 76  Q
    |||||||||||||||||||||||||||||||| |||||||||| ||||||||||| ||||    
T  20119952 atgtatattacattttgattggttgatatcatgagagggtaaattaccctctaaacaaga 20119893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 34 - 97
Target Start/End: Complemental strand, 33244670 - 33244607
Alignment:
Q  34 attggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaacc 97  Q
    ||||||||||||||| |||||||||||||| |||||||||||| ||| ||||||||||||||||    
T  33244670 attggttgatatcatgagagggtaaaatactctctaaataagagagggtaatctagaaaaaacc 33244607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 17286404 - 17286327
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaa 95  Q
    ||||||||||||||||||||| |||||||||| ||||||| |||||||||||||| |||| ||| ||||||| ||||||    
T  17286404 atgtatattacattttgattgattgatatcatgagagggt-aaataccctctaaacaagagagggtaatctaaaaaaaa 17286327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 17968401 - 17968466
Alignment:
Q  18 tgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataa 84  Q
    |||||||||||||||||||||||||||||||||||| || || |||||||||||||||| |||||||    
T  17968401 tgtatattacattttgattggttgatatcataagagcgt-aattaccctctaaataagagaggataa 17968466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 99
Target Start/End: Complemental strand, 19063983 - 19063902
Alignment:
Q  18 tgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaaccaa 99  Q
    |||||||| |||||||||||||||||||| | | ||||||||||| |||||||| |||| ||| |||| |||||||||||||    
T  19063983 tgtatattgcattttgattggttgatatcttgaaagggtaaaatatcctctaaacaagagagggtaatgtagaaaaaaccaa 19063902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 17 - 76
Target Start/End: Original strand, 725625 - 725684
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataaga 76  Q
    |||||||||| ||||||||||||||||||||| |||||||||| ||||||||||| ||||    
T  725625 atgtatattatattttgattggttgatatcatgagagggtaaattaccctctaaacaaga 725684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 17 - 76
Target Start/End: Original strand, 44459395 - 44459454
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataaga 76  Q
    ||||||||||||||||||||||||||||| || |||||||||| ||||||||||| ||||    
T  44459395 atgtatattacattttgattggttgatattatgagagggtaaattaccctctaaacaaga 44459454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 17 - 64
Target Start/End: Complemental strand, 44882649 - 44882602
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaatacc 64  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  44882649 atgtatattacattttgattggttgatatcataagagggtaaattacc 44882602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 98 - 160
Target Start/End: Original strand, 11504781 - 11504843
Alignment:
Q  98 aatttgctagataattatcaattaactcatgtagttttgcatttaaaagagaaatggaactct 160  Q
    |||||| |||||||||||||| |||||||||||||||| |||||||||| ||||||| |||||    
T  11504781 aatttggtagataattatcaactaactcatgtagtttttcatttaaaagggaaatggcactct 11504843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 76
Target Start/End: Original strand, 44884753 - 44884808
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataaga 76  Q
    ||||||||||||||||||||||||||||||||    ||||||||||||||||||||||||    
T  44884753 atgtatattacattttgattggttgatatcat----gggtaaaataccctctaaataaga 44884808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 47505669 - 47505746
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaa 95  Q
    |||||||||||||||||||||||||||||||| | ||||  ||||| |||||||| |||| ||| ||||||||||||||    
T  47505669 atgtatattacattttgattggttgatatcatga-aggggtaaatatcctctaaacaagagagggtaatctagaaaaaa 47505746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 76
Target Start/End: Complemental strand, 4859648 - 4859592
Alignment:
Q  20 tatattacattttgattggttgatatcataagagggtaaaataccctctaaataaga 76  Q
    |||||||||||||||||||||||||| || |||||||||| ||||||||||| ||||    
T  4859648 tatattacattttgattggttgatatgatgagagggtaaattaccctctaaacaaga 4859592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 20 - 71
Target Start/End: Original strand, 40015779 - 40015830
Alignment:
Q  20 tatattacattttgattggttgatatcataagagggtaaaataccctctaaa 71  Q
    |||||||||||||||||| |||||||||| |||||||||| |||||||||||    
T  40015779 tatattacattttgattgattgatatcatgagagggtaaattaccctctaaa 40015830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 76
Target Start/End: Complemental strand, 41336197 - 41336138
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataaga 76  Q
    ||||||||||||||||||||| |||||||||| ||||| |||| ||||||||||| ||||    
T  41336197 atgtatattacattttgattgattgatatcatgagaggataaattaccctctaaacaaga 41336138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 17 - 59
Target Start/End: Original strand, 21737436 - 21737478
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaa 59  Q
    |||||||||||||||||||||||||||||||| ||||||||||    
T  21737436 atgtatattacattttgattggttgatatcatgagagggtaaa 21737478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 58
Target Start/End: Original strand, 18995069 - 18995110
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaa 58  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  18995069 atgtatattacattttgattggttgatatcatgagagggtaa 18995110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 54
Target Start/End: Original strand, 23594626 - 23594663
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagg 54  Q
    ||||||||||||||||||||||||||||||||||||||    
T  23594626 atgtatattacattttgattggttgatatcataagagg 23594663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 28588263 - 28588193
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaa 95  Q
    |||||||||||||||||||| ||||||||        ||||||||||||||||||||||| ||||||||||| ||||||    
T  28588263 atgtatattacattttgattagttgatat--------ggtaaaataccctctaaataagagaggataatctaaaaaaaa 28588193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 58
Target Start/End: Original strand, 47909437 - 47909478
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaa 58  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  47909437 atgtatattacattttgattggttgatatcatgagagggtaa 47909478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 85
Target Start/End: Original strand, 9663691 - 9663758
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataat 85  Q
    |||||||||||||||||||||||||||||||| |||| || || ||||||||||| |||| ||| ||||    
T  9663691 atgtatattacattttgattggttgatatcatgagagagt-aattaccctctaaacaagagagggtaat 9663758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 85
Target Start/End: Original strand, 33246741 - 33246808
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataat 85  Q
    |||||||||||||||||||||||||||||||| |||| ||||| || |||||||| |||| ||| ||||    
T  33246741 atgtatattacattttgattggttgatatcatgagagagtaaatta-cctctaaacaagagagggtaat 33246808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 76
Target Start/End: Original strand, 41858648 - 41858704
Alignment:
Q  20 tatattacattttgattggttgatatcataagagggtaaaataccctctaaataaga 76  Q
    ||||||||||||| ||| ||||||||||| |||||||||| ||||||||||| ||||    
T  41858648 tatattacattttaattagttgatatcatgagagggtaaattaccctctaaacaaga 41858704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 97
Target Start/End: Complemental strand, 41406016 - 41405938
Alignment:
Q  18 tgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaacc 97  Q
    ||||||||||||||||||||||||||||| | | ||||  |||||||| ||||| |||| ||| |||| |||||||||||    
T  41406016 tgtatattacattttgattggttgatatcttga-agggataaataccccctaaacaagagagggtaatgtagaaaaaacc 41405938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 76
Target Start/End: Original strand, 46555583 - 46555642
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataaga 76  Q
    |||||||||| |||||||||||||||||| || ||||| |||| ||||||||||| ||||    
T  46555583 atgtatattatattttgattggttgatattatgagaggataaattaccctctaaacaaga 46555642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 100
Target Start/End: Original strand, 586160 - 586241
Alignment:
Q  18 tgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaaccaat 100  Q
    ||||||||||||||||||||||||||||| | | ||||  ||||||||  ||||||||| ||  |||| ||||||||||||||    
T  586160 tgtatattacattttgattggttgatatcttga-aggggtaaataccccataaataagagagagtaatgtagaaaaaaccaat 586241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 37708363 - 37708420
Alignment:
Q  18 tgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataaga 76  Q
    ||||||||||||||||||||||||||||| ||| || || |||||||||||||| ||||    
T  37708363 tgtatattacattttgattggttgatatcttaaaagagt-aaataccctctaaacaaga 37708420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 38229767 - 38229824
Alignment:
Q  18 tgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataaga 76  Q
    ||||||||||||||||||||||||||||| | | ||||| |||||||||||||| ||||    
T  38229767 tgtatattacattttgattggttgatatcttgaaagggt-aaataccctctaaacaaga 38229824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 58
Target Start/End: Complemental strand, 21815289 - 21815248
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaa 58  Q
    |||||||||||||||||||||||||||||| | |||||||||    
T  21815289 atgtatattacattttgattggttgatatcttgagagggtaa 21815248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 58
Target Start/End: Original strand, 30760154 - 30760195
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaa 58  Q
    |||||||||||||||||||| ||||||||||| |||||||||    
T  30760154 atgtatattacattttgattagttgatatcatgagagggtaa 30760195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 99
Target Start/End: Complemental strand, 47252044 - 47251964
Alignment:
Q  18 tgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaaccaa 99  Q
    ||||||| ||||||||||||||||||||| | | ||||  |||||||| ||||| |||| ||| |||| |||||||||||||    
T  47252044 tgtatatcacattttgattggttgatatcttga-aggggtaaataccccctaaacaagagagggtaatgtagaaaaaaccaa 47251964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 58
Target Start/End: Complemental strand, 48605766 - 48605725
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaa 58  Q
    |||||||||||||||||||||||||||||||| |||| ||||    
T  48605766 atgtatattacattttgattggttgatatcatgagagagtaa 48605725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 98
Target Start/End: Original strand, 33982593 - 33982672
Alignment:
Q  18 tgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaacca 98  Q
    ||||||||| |||||||||||||| |||| | |  ||||||| ||||||||||| |||| ||| |||| ||||||||||||    
T  33982593 tgtatattatattttgattggttggtatcttgaaggggtaaa-taccctctaaacaagagagggtaatgtagaaaaaacca 33982672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 37624145 - 37624215
Alignment:
Q  18 tgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctag 89  Q
    ||||||||||||||||||||||||||||| | | ||||| |||||||| ||||| |||| ||| | ||||||    
T  37624145 tgtatattacattttgattggttgatatcttgaaagggt-aaataccccctaaacaagagagggttatctag 37624215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 76
Target Start/End: Complemental strand, 48683143 - 48683085
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataaga 76  Q
    |||||||||||||||| |||||||||||| |||| ||||| || ||||||||||| ||||    
T  48683143 atgtatattacattttaattggttgatataataaaagggt-aattaccctctaaacaaga 48683085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 59
Target Start/End: Complemental strand, 46934307 - 46934265
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaa 59  Q
    ||||||| ||||||||||||||||||||||||||  |||||||    
T  46934307 atgtatactacattttgattggttgatatcataaatgggtaaa 46934265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 59
Target Start/End: Complemental strand, 1598971 - 1598930
Alignment:
Q  18 tgtatattacattttgattggttgatatcataagagggtaaa 59  Q
    ||||||||||||||||||||||||||||| | | ||||||||    
T  1598971 tgtatattacattttgattggttgatatcttgaaagggtaaa 1598930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 58
Target Start/End: Original strand, 48607717 - 48607758
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaa 58  Q
    ||||||||| |||||||||||||||||||||| |||| ||||    
T  48607717 atgtatattgcattttgattggttgatatcatgagagagtaa 48607758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 45
Target Start/End: Original strand, 5374581 - 5374609
Alignment:
Q  17 atgtatattacattttgattggttgatat 45  Q
    |||||||||||||||||||||||||||||    
T  5374581 atgtatattacattttgattggttgatat 5374609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 8391518 - 8391439
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaacc 97  Q
    |||||| |||||||||||||| |||||||||| || |||  ||||||||  |||| |||| ||| |||||||| |||||||    
T  8391518 atgtatgttacattttgattgtttgatatcatgag-gggataaataccccataaacaagagagggtaatctaggaaaaacc 8391439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 46
Target Start/End: Complemental strand, 33979440 - 33979412
Alignment:
Q  18 tgtatattacattttgattggttgatatc 46  Q
    |||||||||||||||||||||||||||||    
T  33979440 tgtatattacattttgattggttgatatc 33979412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 38224415 - 38224340
Alignment:
Q  18 tgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaa 94  Q
    ||||||| ||||||||||||||||||||| | | ||||  ||||| |||||||| |||||||  |||| ||||||||    
T  38224415 tgtatatcacattttgattggttgatatcttga-agggataaatatcctctaaacaagatagagtaatgtagaaaaa 38224340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 46
Target Start/End: Complemental strand, 42825680 - 42825652
Alignment:
Q  18 tgtatattacattttgattggttgatatc 46  Q
    |||||||||||||||||||||||||||||    
T  42825680 tgtatattacattttgattggttgatatc 42825652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 69; Significance: 4e-31; HSPs: 56)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 38280339 - 38280259
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaacc 97  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  38280339 atgtatattacattttgattggttgatatcatgagagggtaaaataccctctaaataaaatagggtaatctagaaaaaacc 38280259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 25225380 - 25225458
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaa 95  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| ||||||    
T  25225380 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagagagggtaatctaaaaaaaa 25225458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 75652 - 75574
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaa 95  Q
    |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| | ||| ||||||||||||||    
T  75652 atgtatattatattttgattggttgatatcataagaaggtaaaataccctctaaataaaagagggtaatctagaaaaaa 75574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 39965258 - 39965180
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaa 95  Q
    |||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||||| ||| ||||| ||||||||    
T  39965258 atgtatattacattttgattggttgatatcatgagagaataaaataccctctaaataagagagggtaatccagaaaaaa 39965180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 99
Target Start/End: Original strand, 21191843 - 21191924
Alignment:
Q  18 tgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaaccaa 99  Q
    |||||||| |||||||||||||||||||| | | |||||||||||||||||||| |||| ||| |||| |||||||||||||    
T  21191843 tgtatattgcattttgattggttgatatcttgaaagggtaaaataccctctaaacaagagagggtaatgtagaaaaaaccaa 21191924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 28390032 - 28389954
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaacc 97  Q
    |||||||||||||||||||||||| ||||||| ||||  ||||||||||||||||||||| ||| ||||||| ||||||||    
T  28390032 atgtatattacattttgattggttaatatcatgagag--taaaataccctctaaataagagagggtaatctaaaaaaaacc 28389954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 34 - 97
Target Start/End: Complemental strand, 3904982 - 3904919
Alignment:
Q  34 attggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaacc 97  Q
    ||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||| ||||||||    
T  3904982 attggttgatatcatgagagggtaaaataccctctaaataagagagggtaatctaaaaaaaacc 3904919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 76
Target Start/End: Original strand, 3907038 - 3907097
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataaga 76  Q
    |||||||||||||||||||||||||||||||| |||||||||| ||||||||||| ||||    
T  3907038 atgtatattacattttgattggttgatatcatgagagggtaaattaccctctaaacaaga 3907097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 15400914 - 15400992
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaac 96  Q
    |||||||||||||||||||||||||||||||| | ||||| |||||||||||||| |||||||  ||||||| |||||||    
T  15400914 atgtatattacattttgattggttgatatcatgatagggt-aaataccctctaaacaagatagagtaatctaaaaaaaac 15400992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 20 - 98
Target Start/End: Complemental strand, 1053210 - 1053133
Alignment:
Q  20 tatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaacca 98  Q
    ||||||||||||||||| ||||||||||| ||||||| |||||||||||||| |||| ||  |||||||||||||||||    
T  1053210 tatattacattttgatttgttgatatcatgagagggt-aaataccctctaaacaagagagagtaatctagaaaaaacca 1053133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 17 - 98
Target Start/End: Complemental strand, 39067120 - 39067040
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaacca 98  Q
    |||||||||||||||| |||| |||||||||| ||||| |||| ||||||||||||||||| || ||||||| |||||||||    
T  39067120 atgtatattacattttaattgattgatatcatgagaggataaa-taccctctaaataagattgggtaatctaaaaaaaacca 39067040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 24 - 95
Target Start/End: Complemental strand, 2290456 - 2290386
Alignment:
Q  24 ttacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaa 95  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||||| |||| ||| ||||||| ||||||    
T  2290456 ttacattttgattggttgatatcatgagagggt-aaataccctctaaacaagagagggtaatctaaaaaaaa 2290386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 4738397 - 4738459
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagatagg 80  Q
    |||||||||||||||||||||||| ||||||||||||||| || ||||||||||| ||||||||    
T  4738397 atgtatattacattttgattggttcatatcataagagggt-aattaccctctaaacaagatagg 4738459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 34 - 97
Target Start/End: Complemental strand, 14004086 - 14004023
Alignment:
Q  34 attggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaacc 97  Q
    ||||||||||||||| ||| ||||||||||||||||||||||| ||| ||||||| ||||||||    
T  14004086 attggttgatatcatgagacggtaaaataccctctaaataagagagggtaatctaaaaaaaacc 14004023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 17 - 94
Target Start/End: Complemental strand, 3849871 - 3849795
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaa 94  Q
    |||||||||||||||||||||||||||||||| ||||  | ||||||||| |||| |||| ||| |||||||||||||    
T  3849871 atgtatattacattttgattggttgatatcatgagagtat-aaataccctttaaacaagagagggtaatctagaaaaa 3849795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 14006186 - 14006251
Alignment:
Q  20 tatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataat 85  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||||| || |||| ||| ||||    
T  14006186 tatattacattttgattggttgatatcatgagagggtaaattaccctcttaacaagagagggtaat 14006251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 76
Target Start/End: Original strand, 38282396 - 38282455
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataaga 76  Q
    ||||||||||||||||||||| |||||||||| ||||| |||| ||||||||||| ||||    
T  38282396 atgtatattacattttgattgattgatatcatgagaggataaattaccctctaaacaaga 38282455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 39159922 - 39159852
Alignment:
Q  18 tgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctag 89  Q
    ||||||||||||||||||||||||||||| ||| ||||| |||||| ||||||| |||| ||| ||||||||    
T  39159922 tgtatattacattttgattggttgatatcttaaaagggt-aaatactctctaaacaagagagggtaatctag 39159852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 39209272 - 39209342
Alignment:
Q  18 tgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctag 89  Q
    ||||||||||||||||||||||||||||| ||| ||||| |||||| ||||||| |||| ||| ||||||||    
T  39209272 tgtatattacattttgattggttgatatcttaaaagggt-aaatactctctaaacaagagagggtaatctag 39209342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 17 - 98
Target Start/End: Original strand, 7575618 - 7575697
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaacca 98  Q
    |||||||||||||||||||||||||||||||| | |||   |||||||| ||||| |||| ||| |||| ||||||||||||    
T  7575618 atgtatattacattttgattggttgatatcatgaaagg--taaataccccctaaacaagagagggtaatgtagaaaaaacca 7575697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 95
Target Start/End: Complemental strand, 4736786 - 4736713
Alignment:
Q  20 tatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaa 95  Q
    |||||| |||||| ||||||||||||||| ||||||||||||||||||  || |||| ||| ||||||| ||||||    
T  4736786 tatattgcattttaattggttgatatcatgagagggtaaaataccctc--aacaagagagggtaatctaaaaaaaa 4736713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 98
Target Start/End: Original strand, 33182840 - 33182919
Alignment:
Q  18 tgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaacca 98  Q
    ||||||||| ||||||||||||||||||| ||| ||||  ||||||| ||||||||| | ||| |||| ||||||||||||    
T  33182840 tgtatattaaattttgattggttgatatcttaa-aggggtaaataccatctaaataaaagagggtaatgtagaaaaaacca 33182919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 76
Target Start/End: Original strand, 77732 - 77791
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataaga 76  Q
    |||||||||||||||||||| ||||||||||| ||||| |||| |||| |||||| ||||    
T  77732 atgtatattacattttgattcgttgatatcatgagaggataaattaccttctaaacaaga 77791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 84
Target Start/End: Original strand, 2292476 - 2292542
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataa 84  Q
    |||||||||||||||||||||||| ||||||| |||| || || ||||||||||| |||| |||||||    
T  2292476 atgtatattacattttgattggtttatatcatgagagagt-aattaccctctaaacaagagaggataa 2292542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 76
Target Start/End: Complemental strand, 25223388 - 25223330
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataaga 76  Q
    |||||||||||||||||||||||| ||||||| ||| |||||| ||||||||||| ||||    
T  25223388 atgtatattacattttgattggttaatatcatgaga-ggtaaattaccctctaaacaaga 25223330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 76
Target Start/End: Original strand, 27551731 - 27551789
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataaga 76  Q
    |||||||||||||||||||||||||||||||  ||||||| || ||||||||||| ||||    
T  27551731 atgtatattacattttgattggttgatatcaggagagggt-aattaccctctaaacaaga 27551789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 17 - 59
Target Start/End: Complemental strand, 3753082 - 3753040
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaa 59  Q
    |||||||||||||| ||||||||||||||||| ||||||||||    
T  3753082 atgtatattacattatgattggttgatatcatgagagggtaaa 3753040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 58
Target Start/End: Original strand, 28391936 - 28391977
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaa 58  Q
    ||||||||||||||||||||| |||||||||| |||||||||    
T  28391936 atgtatattacattttgattgattgatatcatgagagggtaa 28391977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 38932509 - 38932585
Alignment:
Q  18 tgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaa 95  Q
    ||||||||||||||||||||||||||||| | | |||   |||||||||||||| |||| ||| |||| |||||||||    
T  38932509 tgtatattacattttgattggttgatatcttga-aggagtaaataccctctaaacaagagagggtaatgtagaaaaaa 38932585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 58
Target Start/End: Original strand, 42080882 - 42080923
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaa 58  Q
    |||||||||||||||||||||||||||||||| | |||||||    
T  42080882 atgtatattacattttgattggttgatatcatgaaagggtaa 42080923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 37726053 - 37726097
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaat 61  Q
    |||||||||||||||||||| ||||||||||| ||| ||||||||    
T  37726053 atgtatattacattttgatttgttgatatcatgagaaggtaaaat 37726097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 518117 - 518047
Alignment:
Q  18 tgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctag 89  Q
    |||||||||||||||||||| |||||||| | | ||||| |||||| | ||||| |||||||| ||||||||    
T  518117 tgtatattacattttgattgattgatatcttgaaagggt-aaatacaccctaaacaagatagggtaatctag 518047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 80
Target Start/End: Original strand, 3851813 - 3851871
Alignment:
Q  21 atattacattttgattggttgatatcataagagggtaaaataccctctaaataagatagg 80  Q
    |||||| ||||||||||||||||||||| ||||| | || ||||| ||||||||||||||    
T  3851813 atattatattttgattggttgatatcatgagaggct-aattaccccctaaataagatagg 3851871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 95
Target Start/End: Original strand, 10455678 - 10455748
Alignment:
Q  24 ttacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaa 95  Q
    ||||||||| ||||||||||||| | | ||||  |||||||||||||| |||| |||||||| |||||||||    
T  10455678 ttacattttaattggttgatatcttga-agggataaataccctctaaacaagagaggataatgtagaaaaaa 10455748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 14454631 - 14454674
Alignment:
Q  16 catgtatattacattttgattggttgatatcataagagggtaaa 59  Q
    ||||||||||||||||||||||||||||||| | | ||||||||    
T  14454631 catgtatattacattttgattggttgatatcttgaaagggtaaa 14454674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 76
Target Start/End: Complemental strand, 15152450 - 15152392
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataaga 76  Q
    ||||||||||||||||||||||||||||| || |||| || || ||||||||||| ||||    
T  15152450 atgtatattacattttgattggttgatattatgagagagt-aattaccctctaaacaaga 15152392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 18248655 - 18248725
Alignment:
Q  18 tgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctag 89  Q
    ||||||||||||||||||||||||||||| | |   ||| |||||| ||||||| |||||||| ||||||||    
T  18248655 tgtatattacattttgattggttgatatcttgaattggt-aaatactctctaaacaagatagggtaatctag 18248725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 97
Target Start/End: Complemental strand, 20919170 - 20919093
Alignment:
Q  18 tgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaacc 97  Q
    |||||||||||||||||||| |||||||| ||| || |  |||||||||||||| |||| ||| |||| |||||||||||    
T  20919170 tgtatattacattttgattgattgatatcttaa-agaggtaaataccctctaaacaagagagg-taatgtagaaaaaacc 20919093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 20919938 - 20920008
Alignment:
Q  18 tgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctag 89  Q
    ||||||||||||||||||| ||||||||| | | ||||| |||||||  ||||| |||| ||||||||||||    
T  20919938 tgtatattacattttgattagttgatatcttgaaagggt-aaatacctcctaaacaagagaggataatctag 20920008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 97
Target Start/End: Original strand, 36603003 - 36603081
Alignment:
Q  18 tgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaacc 97  Q
    ||||||||||||||||||||||||||||| | | |||   ||||||| | ||||||||| ||| |||| |||||||||||    
T  36603003 tgtatattacattttgattggttgatatcttga-aggagtaaataccttttaaataagagagggtaatgtagaaaaaacc 36603081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 48
Target Start/End: Complemental strand, 42078935 - 42078904
Alignment:
Q  17 atgtatattacattttgattggttgatatcat 48  Q
    ||||||||||||||||||||||||||||||||    
T  42078935 atgtatattacattttgattggttgatatcat 42078904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 50
Target Start/End: Original strand, 6647275 - 6647305
Alignment:
Q  20 tatattacattttgattggttgatatcataa 50  Q
    |||||||||||||||||||||||||||||||    
T  6647275 tatattacattttgattggttgatatcataa 6647305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 58
Target Start/End: Original strand, 15154506 - 15154544
Alignment:
Q  20 tatattacattttgattggttgatatcataagagggtaa 58  Q
    ||||||||||||||||||||||||||||| | |||||||    
T  15154506 tatattacattttgattggttgatatcatgatagggtaa 15154544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 59
Target Start/End: Complemental strand, 27549756 - 27549714
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaa 59  Q
    |||||||||||||||||||| |||||||||||||  |||||||    
T  27549756 atgtatattacattttgattagttgatatcataaaggggtaaa 27549714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 48
Target Start/End: Original strand, 39775185 - 39775215
Alignment:
Q  18 tgtatattacattttgattggttgatatcat 48  Q
    |||||||||||||||||||||||||||||||    
T  39775185 tgtatattacattttgattggttgatatcat 39775215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 6322414 - 6322478
Alignment:
Q  20 tatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataat 85  Q
    ||||||| ||||||||||||||||||| ||| ||||| |||||| ||||||| |||| ||| ||||    
T  6322414 tatattatattttgattggttgatatcttaaaagggt-aaatactctctaaacaagagagggtaat 6322478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 58
Target Start/End: Complemental strand, 6644616 - 6644575
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaa 58  Q
    |||||||||||||||||||||||| ||||||| ||| |||||    
T  6644616 atgtatattacattttgattggttaatatcatgagaaggtaa 6644575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 14452129 - 14452077
Alignment:
Q  18 tgtatattacattttgattggttgatatcataagagggtaaaataccctctaaa 71  Q
    ||||||||||||||||||||||||||||| | |  |||| ||||||||||||||    
T  14452129 tgtatattacattttgattggttgatatcttgaatgggt-aaataccctctaaa 14452077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 24457921 - 24457845
Alignment:
Q  18 tgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaa 95  Q
    |||||||||||| |||||||||| ||||| | |  ||||||| ||||||||||| |||| ||| |||| |||||||||    
T  24457921 tgtatattacatcttgattggttaatatcttgaaggggtaaa-taccctctaaacaagagagggtaatgtagaaaaaa 24457845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 59
Target Start/End: Original strand, 27479132 - 27479173
Alignment:
Q  18 tgtatattacattttgattggttgatatcataagagggtaaa 59  Q
    ||||||||||||||||||||||||||||| | | ||||||||    
T  27479132 tgtatattacattttgattggttgatatcttgaaagggtaaa 27479173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 36600766 - 36600725
Alignment:
Q  20 tatattacattttgattggttgatatcataagagggtaaaat 61  Q
    ||||||||||||||||||||||||||| ||| | ||||||||    
T  36600766 tatattacattttgattggttgatatcttaaaatggtaaaat 36600725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 46
Target Start/End: Original strand, 519685 - 519713
Alignment:
Q  18 tgtatattacattttgattggttgatatc 46  Q
    |||||||||||||||||||||||||||||    
T  519685 tgtatattacattttgattggttgatatc 519713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 3767890 - 3767930
Alignment:
Q  18 tgtatattacattttgattggttgatatcataagagggtaa 58  Q
    ||||||||||| ||||||||||||||||||| |||| ||||    
T  3767890 tgtatattacactttgattggttgatatcatgagagagtaa 3767930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 15398883 - 15398821
Alignment:
Q  20 tatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataa 84  Q
    |||||||||||||| |||||||||||||| ||||||| || ||||||||||| || | |||||||    
T  15398883 tatattacattttg-ttggttgatatcatgagagggt-aattaccctctaaacaataaaggataa 15398821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 46
Target Start/End: Original strand, 24460787 - 24460815
Alignment:
Q  18 tgtatattacattttgattggttgatatc 46  Q
    |||||||||||||||||||||||||||||    
T  24460787 tgtatattacattttgattggttgatatc 24460815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 46
Target Start/End: Complemental strand, 33178785 - 33178757
Alignment:
Q  18 tgtatattacattttgattggttgatatc 46  Q
    |||||||||||||||||||||||||||||    
T  33178785 tgtatattacattttgattggttgatatc 33178757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 67; Significance: 7e-30; HSPs: 2)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 30677 - 30755
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaa 95  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||    
T  30677 atgtatattacatttttattggttgatatcatgagagggtaaaataccctctaaataagatagggtaatctagaaaaaa 30755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 20796 - 20733
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagatagg 80  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  20796 atgtatattacattttgattggttgatatcataagagggtaaattaccctctaaacaagatagg 20733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 56481 - 56561
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaacc 97  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||| ||||||||||||||||    
T  56481 atgtatattacattttgattggttgatatcatgggagggtaaaataccctctaaataagagagggtaatctagaaaaaacc 56561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 65; Significance: 1e-28; HSPs: 73)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 20352106 - 20352026
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaacc 97  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| ||| ||||||||||||||||    
T  20352106 atgtatattacattttgattggttgatatcatgagagggtaaaatactctctaaataagagagggtaatctagaaaaaacc 20352026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 23417278 - 23417198
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaacc 97  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| |||||||| |||||||    
T  23417278 atgtatattacattttgattggttgatatcatgagagggtaaaataccctctaaataagagagggtaatctagcaaaaacc 23417198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 41039652 - 41039572
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaacc 97  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| ||| ||||||||||||||||    
T  41039652 atgtatattacattttgattggttgatatcatgagagggtaaaataccttctaaataagagagggtaatctagaaaaaacc 41039572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 54921370 - 54921450
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaacc 97  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  54921370 atgtatattacattttgattggttgatattatgagagggtaaaataccctctaaataagagagggtaatctagaaaaaacc 54921450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 20 - 95
Target Start/End: Original strand, 8941226 - 8941301
Alignment:
Q  20 tatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaa 95  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||||||||    
T  8941226 tatattacattttgattggttgatatcatgagagggtaaaataccctctaaataagagagggtaatctagaaaaaa 8941301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 30823775 - 30823697
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaa 95  Q
    |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||||||||    
T  30823775 atgtatataacattttgattggttgatatcatgagagggtaaaataccctctaaataagagagggtaatctagaaaaaa 30823697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 17 - 101
Target Start/End: Original strand, 46719684 - 46719767
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaaccaatt 101  Q
    |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| ||| ||||||| ||||||||||||    
T  46719684 atgtatattacattttgattggttgatatcatgagagggt-aaataccctctaaataagagagggtaatctataaaaaaccaatt 46719767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 24 - 97
Target Start/End: Original strand, 7489261 - 7489334
Alignment:
Q  24 ttacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaacc 97  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||||||||| ||| ||||||||||||||||    
T  7489261 ttacattttgattggttgatatcatgaaagggtaaaataccctctaaataagagagggtaatctagaaaaaacc 7489334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 52449330 - 52449410
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaacc 97  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| | ||||||||| | ||| ||||||||||||||||    
T  52449330 atgtatattacattttgattggttgatatcatgagagggtaaaatatcttctaaataacagagggtaatctagaaaaaacc 52449410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 13530112 - 13530035
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaa 95  Q
    |||||||||||||||||||||||| ||||||| ||||||| |||||||||||||| |||||||| ||||||||||||||    
T  13530112 atgtatattacattttgattggtttatatcatgagagggt-aaataccctctaaacaagatagggtaatctagaaaaaa 13530035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 101
Target Start/End: Complemental strand, 23931668 - 23931585
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaaccaatt 101  Q
    |||||||||||||||||||| |||||||||||||||| || |||||||||||||| |||| ||| |||||||||||| |||||||    
T  23931668 atgtatattacattttgatttgttgatatcataagagagt-aaataccctctaaacaagagagggtaatctagaaaataccaatt 23931585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 28 - 95
Target Start/End: Original strand, 4654973 - 4655040
Alignment:
Q  28 attttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaa 95  Q
    ||||| ||||||||||||||| |||||||||||||||||||||| |||||||| ||||||||||||||    
T  4654973 attttaattggttgatatcatgagagggtaaaataccctctaaacaagatagggtaatctagaaaaaa 4655040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 20 - 95
Target Start/End: Complemental strand, 47805671 - 47805597
Alignment:
Q  20 tatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaa 95  Q
    ||||||||||||||||||||||||||||| ||||||| ||||| |||||||| |||||||| ||||||||||||||    
T  47805671 tatattacattttgattggttgatatcatgagagggt-aaatatcctctaaacaagatagggtaatctagaaaaaa 47805597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 20 - 95
Target Start/End: Original strand, 49875717 - 49875792
Alignment:
Q  20 tatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaa 95  Q
    ||||||||||||||||||||||||||||| ||| |||||||||||||||||| |||| ||| ||||||| ||||||    
T  49875717 tatattacattttgattggttgatatcatgagaaggtaaaataccctctaaacaagagagggtaatctaaaaaaaa 49875792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 17 - 98
Target Start/End: Original strand, 43304841 - 43304921
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaacca 98  Q
    |||||||||||||||||||||||||||||||| | ||||| |||||||||||||| |||| ||| ||||||| |||||||||    
T  43304841 atgtatattacattttgattggttgatatcatgaaagggt-aaataccctctaaacaagagagggtaatctaaaaaaaacca 43304921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 3033936 - 3033856
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaacc 97  Q
    |||||||||| ||||||||||||||||||||| ||||||||||||| | | ||||||||| ||| ||| ||||||||||||    
T  3033936 atgtatattatattttgattggttgatatcatgagagggtaaaatatcatataaataagagagggtaagctagaaaaaacc 3033856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 17 - 85
Target Start/End: Complemental strand, 4652866 - 4652798
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataat 85  Q
    |||||||||||||||||||||||||||||||| |||||||||| ||||||||||| |||| ||| ||||    
T  4652866 atgtatattacattttgattggttgatatcatgagagggtaaattaccctctaaacaagagagggtaat 4652798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 17 - 85
Target Start/End: Original strand, 41041593 - 41041661
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataat 85  Q
    |||||||||||||||||||||||||||||||| |||||||||| ||||||||||| |||| ||| ||||    
T  41041593 atgtatattacattttgattggttgatatcatgagagggtaaattaccctctaaacaagagagggtaat 41041661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 76
Target Start/End: Complemental strand, 7487141 - 7487082
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataaga 76  Q
    |||||||||||||||||||||||||||||||| |||||||||| ||||||||||| ||||    
T  7487141 atgtatattacattttgattggttgatatcatgagagggtaaattaccctctaaacaaga 7487082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 68
Target Start/End: Complemental strand, 9366963 - 9366912
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctct 68  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  9366963 atgtatattacattttgattggttgatatcatgagagggtaaaataccctct 9366912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 95
Target Start/End: Original strand, 16666658 - 16666732
Alignment:
Q  20 tatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaa 95  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||| ||| |||||| |||||||    
T  16666658 tatattacattttgattggttgatatcatgagagggt-aaataccttctaaataagagagggtaatcttgaaaaaa 16666732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 17 - 79
Target Start/End: Complemental strand, 28172226 - 28172165
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagatag 79  Q
    ||||||||| |||||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  28172226 atgtatattgcattttgattggttgatatcatgagagggt-aaataccctctaaataagatag 28172165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 52447276 - 52447211
Alignment:
Q  20 tatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataat 85  Q
    |||||| ||||||||||| |||||||||| |||||||||| |||||||||||||||| ||||||||    
T  52447276 tatattgcattttgattgattgatatcatgagagggtaaattaccctctaaataagagaggataat 52447211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 17363030 - 17363110
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaacc 97  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||| ||| ||||||| | ||| ||||||| ||| ||||    
T  17363030 atgtatattacattttgattgattgatatcatgagagggtaaaatatcctttaaataaaagagggtaatctaaaaacaacc 17363110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 17 - 76
Target Start/End: Original strand, 23419457 - 23419516
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataaga 76  Q
    |||||||||||||||||||||||||||||||| ||| |||||| ||||||||||| ||||    
T  23419457 atgtatattacattttgattggttgatatcatgagatggtaaattaccctctaaacaaga 23419516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 35046211 - 35046287
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaa 95  Q
    ||||||||||||||||||||||||||||||||  |||||  |||||||||||||| |||| ||||| ||||| ||||||    
T  35046211 atgtatattacattttgattggttgatatcat--gagggataaataccctctaaacaagagaggatgatctaaaaaaaa 35046287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 97
Target Start/End: Complemental strand, 47649477 - 47649399
Alignment:
Q  18 tgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaacc 97  Q
    ||||||||||||||||||||||||||||| | | ||||  |||||||||||||| |||||||| |||| |||||||||||    
T  47649477 tgtatattacattttgattggttgatatcttga-aggggtaaataccctctaaacaagatagggtaatgtagaaaaaacc 47649399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 17 - 76
Target Start/End: Original strand, 49970374 - 49970433
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataaga 76  Q
    ||||||||||||||||||||| |||||||||| |||||||||| ||||||||||| ||||    
T  49970374 atgtatattacattttgattgattgatatcatgagagggtaaattaccctctaaacaaga 49970433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 20 - 97
Target Start/End: Complemental strand, 19869783 - 19869707
Alignment:
Q  20 tatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaacc 97  Q
    ||||||||||||||||||||||||||| | | ||||| ||||||||| |||| |||| |||||||| |||||||||||    
T  19869783 tatattacattttgattggttgatatcttgaaagggt-aaataccctataaacaagagaggataatgtagaaaaaacc 19869707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 17 - 94
Target Start/End: Complemental strand, 31289536 - 31289460
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaa 94  Q
    |||||||||||||||| ||||||||||||||| ||||| | ||||||| ||||||||||||||  ||||||| |||||    
T  31289536 atgtatattacattttaattggttgatatcatgagaggat-aaataccttctaaataagatagagtaatctaaaaaaa 31289460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 20 - 97
Target Start/End: Original strand, 43940379 - 43940456
Alignment:
Q  20 tatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaacc 97  Q
    |||||||||||||||||| |||||||| |||  ||||||| ||||||||||| |||| ||| |||| |||||||||||    
T  43940379 tatattacattttgattgattgatatcttaaaggggtaaattaccctctaaacaagagagggtaatgtagaaaaaacc 43940456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 76
Target Start/End: Original strand, 20354226 - 20354284
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataaga 76  Q
    |||||||||||||||||||||||||||||||| ||| |||||| ||||||||||| ||||    
T  20354226 atgtatattacattttgattggttgatatcatgaga-ggtaaattaccctctaaacaaga 20354284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 64
Target Start/End: Original strand, 20787192 - 20787239
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaatacc 64  Q
    |||||||||||||||||||||||||||||||| |||||||||| ||||    
T  20787192 atgtatattacattttgattggttgatatcatgagagggtaaattacc 20787239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 76
Target Start/End: Original strand, 31292752 - 31292810
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataaga 76  Q
    |||||||||||||||||||||||||||||||| ||||||| || ||||||||||| ||||    
T  31292752 atgtatattacattttgattggttgatatcatgagagggt-aattaccctctaaacaaga 31292810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 76
Target Start/End: Complemental strand, 34072932 - 34072874
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataaga 76  Q
    |||||||||||||||||||||||||||||||| ||||||| || ||||||||||| ||||    
T  34072932 atgtatattacattttgattggttgatatcatgagagggt-aattaccctctaaacaaga 34072874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 17518935 - 17518858
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaa 95  Q
    |||||||||||||||||||||  || |||||| ||||||| ||||||| |||||| |||| ||| ||||||||||||||    
T  17518935 atgtatattacattttgattgactggtatcatgagagggt-aaataccgtctaaacaagagagggtaatctagaaaaaa 17518858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 17 - 99
Target Start/End: Original strand, 34074957 - 34075038
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaaccaa 99  Q
    |||||||||||||||||||||||||||||||| | ||||  |||||| || |||| |||| ||  ||||||||||||||||||    
T  34074957 atgtatattacattttgattggttgatatcatga-aggggtaaatacactttaaacaagagagagtaatctagaaaaaaccaa 34075038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 93
Target Start/End: Original strand, 31624675 - 31624747
Alignment:
Q  20 tatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaa 93  Q
    ||||||||||||||||||||| ||||| ||| ||||| ||||||||||||||||||| ||| |||  |||||||    
T  31624675 tatattacattttgattggttaatatcttaaaagggt-aaataccctctaaataagagagggtaaagtagaaaa 31624747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 85
Target Start/End: Original strand, 13534715 - 13534782
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataat 85  Q
    |||||||||||||||||||||||||||||||| |||| || || ||||||||||| |||| ||| ||||    
T  13534715 atgtatattacattttgattggttgatatcatgagagagt-aattaccctctaaacaagagagggtaat 13534782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 76
Target Start/End: Complemental strand, 17361038 - 17360982
Alignment:
Q  20 tatattacattttgattggttgatatcataagagggtaaaataccctctaaataaga 76  Q
    ||||||||||||| ||||||||||||||| ||| |||||| ||||||||||| ||||    
T  17361038 tatattacattttaattggttgatatcatgagatggtaaattaccctctaaacaaga 17360982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 50496282 - 50496322
Alignment:
Q  18 tgtatattacattttgattggttgatatcataagagggtaa 58  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  50496282 tgtatattacattttgattggttgatatcattagagggtaa 50496322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 97
Target Start/End: Original strand, 7113852 - 7113930
Alignment:
Q  18 tgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaacc 97  Q
    ||||||||||||||||||||||||||||| | | ||||  |||||||||||||| |||| ||| ||||  ||||||||||    
T  7113852 tgtatattacattttgattggttgatatcttga-aggggtaaataccctctaaacaagagagggtaatgcagaaaaaacc 7113930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 23933706 - 23933768
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagatagg 80  Q
    |||||||||||||||| ||||||||||||||| ||| ||| || ||||||||||| ||||||||    
T  23933706 atgtatattacattttaattggttgatatcatgagatggt-aattaccctctaaacaagatagg 23933768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 38623610 - 38623680
Alignment:
Q  18 tgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctag 89  Q
    |||||||||||||||||||| |||||||| | | ||||| |||||||||||||| |||| ||| ||||||||    
T  38623610 tgtatattacattttgattgattgatatcttgaaagggt-aaataccctctaaacaagagagggtaatctag 38623680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 17 - 59
Target Start/End: Complemental strand, 27956605 - 27956563
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaa 59  Q
    ||||||||||||||||||||| |||||||||| ||||||||||    
T  27956605 atgtatattacattttgattgattgatatcatgagagggtaaa 27956563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 74
Target Start/End: Original strand, 42180214 - 42180267
Alignment:
Q  20 tatattacattttgattggttgatatcataagagggtaaaataccctctaaataa 74  Q
    ||||||||||||||||||||||||||||| | ||||  |||||||||||||||||    
T  42180214 tatattacattttgattggttgatatcatga-agggataaataccctctaaataa 42180267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 56 - 97
Target Start/End: Original strand, 7489375 - 7489416
Alignment:
Q  56 taaaataccctctaaataagataggataatctagaaaaaacc 97  Q
    ||||||||||||||||||||| ||| ||||||||||||||||    
T  7489375 taaaataccctctaaataagagagggtaatctagaaaaaacc 7489416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 58
Target Start/End: Complemental strand, 8939308 - 8939267
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaa 58  Q
    |||||||||||||||||||| ||||||||||| |||||||||    
T  8939308 atgtatattacattttgattagttgatatcatgagagggtaa 8939267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 58
Target Start/End: Complemental strand, 16664561 - 16664520
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaa 58  Q
    ||||||||| |||||||||||||||||||||| |||||||||    
T  16664561 atgtatatttcattttgattggttgatatcatgagagggtaa 16664520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 90
Target Start/End: Original strand, 47650796 - 47650856
Alignment:
Q  29 ttttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctaga 90  Q
    ||||||||||||| |||| ||| |||||||| ||||| |||||||||||||| |||||||||    
T  47650796 ttttgattggttgctatcttaaaagggtaaa-taccccctaaataagatagggtaatctaga 47650856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 58
Target Start/End: Complemental strand, 49873627 - 49873586
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaa 58  Q
    |||||||||||||||||||||||||||||||| |||| ||||    
T  49873627 atgtatattacattttgattggttgatatcatgagagagtaa 49873586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 54
Target Start/End: Complemental strand, 55449518 - 55449481
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagg 54  Q
    |||||||||||||||||||||||||||||||| |||||    
T  55449518 atgtatattacattttgattggttgatatcatgagagg 55449481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 98
Target Start/End: Original strand, 14270096 - 14270174
Alignment:
Q  18 tgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaacca 98  Q
    ||||||||||||||||||||||||||||| | | ||||| |||||||| ||||| |||| ||| |||  ||||||||||||    
T  14270096 tgtatattacattttgattggttgatatcttga-agggt-aaataccccctaaacaagagagggtaacgtagaaaaaacca 14270174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 24577911 - 24577986
Alignment:
Q  18 tgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaa 94  Q
    |||||||||| |||||||||||||||||| | | ||||| ||||||||| |||| |||| ||| |||| ||||||||    
T  24577911 tgtatattaccttttgattggttgatatcttgaaagggt-aaataccctataaacaagagagggtaatgtagaaaaa 24577986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 97
Target Start/End: Original strand, 10659161 - 10659234
Alignment:
Q  22 tattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaacc 97  Q
    ||||||||||||||||||||||||| | | ||||| |||||| ||||||| |||| ||| |||| |||||||||||    
T  10659161 tattacattttgattggttgatatcttga-agggt-aaatactctctaaacaagagagggtaatgtagaaaaaacc 10659234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 97
Target Start/End: Original strand, 10873306 - 10873379
Alignment:
Q  22 tattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaacc 97  Q
    ||||||||||||||||||||||||| | | ||||| |||||| ||||||| |||| ||| |||| |||||||||||    
T  10873306 tattacattttgattggttgatatcttga-agggt-aaatactctctaaacaagagagggtaatgtagaaaaaacc 10873379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 48
Target Start/End: Original strand, 13861919 - 13861950
Alignment:
Q  17 atgtatattacattttgattggttgatatcat 48  Q
    ||||||||||||||||||||||||||||||||    
T  13861919 atgtatattacattttgattggttgatatcat 13861950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 97
Target Start/End: Original strand, 26923811 - 26923889
Alignment:
Q  18 tgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaacc 97  Q
    ||||||||||||||||||||||||||||| | | || |  ||||| |||||||| |||| ||| |||| |||||||||||    
T  26923811 tgtatattacattttgattggttgatatcttga-agtggtaaatatcctctaaacaagagagggtaatgtagaaaaaacc 26923889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 58
Target Start/End: Complemental strand, 31309486 - 31309451
Alignment:
Q  23 attacattttgattggttgatatcataagagggtaa 58  Q
    |||||||||||||||||||||||||| |||||||||    
T  31309486 attacattttgattggttgatatcatgagagggtaa 31309451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 43594791 - 43594861
Alignment:
Q  18 tgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctag 89  Q
    ||||||||| |||||||||| |||||||| ||| | |||||| ||||| ||||| |||| ||||||||||||    
T  43594791 tgtatattatattttgattgattgatatcttaaaaaggtaaa-taccccctaaacaagagaggataatctag 43594861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 48952854 - 48952784
Alignment:
Q  18 tgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctag 89  Q
    ||||||||||||||||||||||||||||| | | ||||| |||||||| ||||| |||| | | ||||||||    
T  48952854 tgtatattacattttgattggttgatatcttgaaagggt-aaataccccctaaacaagagaaggtaatctag 48952784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 7111126 - 7111069
Alignment:
Q  18 tgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataaga 76  Q
    ||||||||||||||||||| ||||||||| | | ||||| |||||||||||||| ||||    
T  7111126 tgtatattacattttgattagttgatatcttgaaagggt-aaataccctctaaacaaga 7111069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 19871232 - 19871300
Alignment:
Q  18 tgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatcta 88  Q
    ||||||||||||||||||||||||||||  | | ||||| |||||||||||||| |||| ||| |||||||    
T  19871232 tgtatattacattttgattggttgatat-ttgaaagggt-aaataccctctaaacaagagagggtaatcta 19871300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 58
Target Start/End: Complemental strand, 20785206 - 20785168
Alignment:
Q  20 tatattacattttgattggttgatatcataagagggtaa 58  Q
    ||||||| ||||||||||||||||||||| |||||||||    
T  20785206 tatattatattttgattggttgatatcatgagagggtaa 20785168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 50792697 - 50792754
Alignment:
Q  18 tgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataaga 76  Q
    ||||||||||||||||||||||||||||| | | ||||| ||||||||| |||| ||||    
T  50792697 tgtatattacattttgattggttgatatcttgaaagggt-aaataccctttaaacaaga 50792754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 58
Target Start/End: Original strand, 3035929 - 3035970
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaa 58  Q
    |||||||||||||||||||||||| |||| || |||||||||    
T  3035929 atgtatattacattttgattggtttatattatgagagggtaa 3035970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 59
Target Start/End: Original strand, 6506002 - 6506043
Alignment:
Q  18 tgtatattacattttgattggttgatatcataagagggtaaa 59  Q
    ||||||||||||||||||||||||||||| ||| | ||||||    
T  6506002 tgtatattacattttgattggttgatatcttaaaaaggtaaa 6506043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 59
Target Start/End: Complemental strand, 26917710 - 26917669
Alignment:
Q  18 tgtatattacattttgattggttgatatcataagagggtaaa 59  Q
    ||||||||||||||||||||||||||||| | | ||||||||    
T  26917710 tgtatattacattttgattggttgatatcttgaaagggtaaa 26917669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 46
Target Start/End: Complemental strand, 35044963 - 35044934
Alignment:
Q  17 atgtatattacattttgattggttgatatc 46  Q
    ||||||||||||||||||||||||||||||    
T  35044963 atgtatattacattttgattggttgatatc 35044934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 54
Target Start/End: Complemental strand, 35824402 - 35824365
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagg 54  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  35824402 atgtatattacattttgattggtttatatcatgagagg 35824365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 59
Target Start/End: Original strand, 51943683 - 51943724
Alignment:
Q  18 tgtatattacattttgattggttgatatcataagagggtaaa 59  Q
    ||||||||||||||||||||||| ||||| ||| ||||||||    
T  51943683 tgtatattacattttgattggttaatatcttaaaagggtaaa 51943724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 8081198 - 8081269
Alignment:
Q  18 tgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctaga 90  Q
    ||||||||||||||| ||||||||||||| | | | ||| |||||||| ||||| |||| ||| |||||||||    
T  8081198 tgtatattacattttaattggttgatatcttgaaatggt-aaataccccctaaacaagagagggtaatctaga 8081269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 76
Target Start/End: Original strand, 17520084 - 17520139
Alignment:
Q  20 tatattacattttgattggttgatatcataagagggtaaaataccctctaaataaga 76  Q
    |||||||||||||||||| |||||||||| ||||| | || ||||||||||| ||||    
T  17520084 tatattacattttgattgattgatatcatgagaggat-aattaccctctaaacaaga 17520139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0779 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0779
Description:

Target: scaffold0779; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 20 - 98
Target Start/End: Original strand, 140 - 218
Alignment:
Q  20 tatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaacca 98  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| |||| ||||||||||||    
T  140 tatattacattttgattggttgatatcatgagagggtaaaataccctctaaataagagagggtaatatagaaaaaacca 218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0208 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0208
Description:

Target: scaffold0208; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 84
Target Start/End: Original strand, 5874 - 5940
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataa 84  Q
    |||||||||||||||||||||||||||||||||||||||| || ||| |||| |||||||||||||||    
T  5874 atgtatattacattttgattggttgatatcataagagggt-aattactctctgaataagataggataa 5940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0208; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 3939 - 3860
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaacc 97  Q
    ||||||||||||||||||||| |||||||||| |  ||||||| ||||||||||| |||| ||| ||||||||||||||||    
T  3939 atgtatattacattttgattgattgatatcatgaaggggtaaa-taccctctaaacaagagagggtaatctagaaaaaacc 3860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 95
Target Start/End: Original strand, 71826 - 71900
Alignment:
Q  20 tatattacattttgattggttgatatcataagagggtaaaataccctctaaataagataggataatctagaaaaaa 95  Q
    |||||||||||||||||| |||||||| | | ||||| ||||| || ||||| |||| |||||||| |||||||||    
T  71826 tatattacattttgattgattgatatcttgaaagggt-aaatatcccctaaacaagagaggataatgtagaaaaaa 71900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 54
Target Start/End: Original strand, 6145 - 6182
Alignment:
Q  17 atgtatattacattttgattggttgatatcataagagg 54  Q
    |||||||||| ||||||||||||||||||||| |||||    
T  6145 atgtatattaaattttgattggttgatatcatgagagg 6182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University