View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11714_low_5 (Length: 606)

Name: NF11714_low_5
Description: NF11714
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11714_low_5
NF11714_low_5
[»] chr8 (33 HSPs)
chr8 (17-534)||(43803916-43804433)
chr8 (534-606)||(29938059-29938132)
chr8 (542-606)||(18594544-18594608)
chr8 (542-606)||(34842501-34842565)
chr8 (542-606)||(39206593-39206657)
chr8 (532-606)||(14422699-14422774)
chr8 (534-606)||(5320562-5320635)
chr8 (534-606)||(35118167-35118240)
chr8 (542-606)||(144401-144465)
chr8 (542-606)||(2042660-2042724)
chr8 (542-606)||(10836891-10836955)
chr8 (542-606)||(13110411-13110475)
chr8 (542-606)||(22260766-22260830)
chr8 (542-606)||(26783869-26783933)
chr8 (542-606)||(34679593-34679657)
chr8 (542-606)||(39218784-39218848)
chr8 (542-606)||(42571601-42571665)
chr8 (542-606)||(7791418-7791482)
chr8 (542-606)||(8021726-8021790)
chr8 (542-606)||(24113302-24113366)
chr8 (542-606)||(40117988-40118052)
chr8 (542-606)||(41575520-41575584)
chr8 (545-606)||(7812005-7812066)
chr8 (542-606)||(5005173-5005237)
chr8 (545-606)||(7774774-7774835)
chr8 (542-606)||(33278407-33278471)
chr8 (542-606)||(33287161-33287225)
chr8 (542-606)||(38167291-38167355)
chr8 (546-606)||(44805080-44805140)
chr8 (543-606)||(34999032-34999095)
chr8 (542-598)||(6144417-6144473)
chr8 (542-606)||(9806880-9806944)
chr8 (546-606)||(39220267-39220327)
[»] chr2 (22 HSPs)
chr2 (542-606)||(6174964-6175028)
chr2 (542-606)||(4016044-4016108)
chr2 (542-606)||(30420303-30420367)
chr2 (531-606)||(31517351-31517427)
chr2 (542-606)||(42937724-42937788)
chr2 (542-606)||(3873380-3873444)
chr2 (542-606)||(18807020-18807084)
chr2 (542-606)||(19901273-19901337)
chr2 (535-606)||(1108277-1108348)
chr2 (542-606)||(4232278-4232342)
chr2 (542-606)||(28329973-28330037)
chr2 (542-606)||(33906183-33906247)
chr2 (542-606)||(39635457-39635521)
chr2 (545-606)||(5733407-5733468)
chr2 (542-606)||(30270815-30270879)
chr2 (545-606)||(1483039-1483099)
chr2 (542-606)||(26323322-26323386)
chr2 (542-600)||(16588918-16588976)
chr2 (542-606)||(851002-851066)
chr2 (546-606)||(16066430-16066490)
chr2 (542-606)||(42446705-42446769)
chr2 (546-606)||(44947678-44947738)
[»] chr3 (30 HSPs)
chr3 (532-606)||(25999379-25999454)
chr3 (542-606)||(8042609-8042673)
chr3 (542-606)||(15520264-15520328)
chr3 (542-606)||(20842470-20842534)
chr3 (542-606)||(37698265-37698329)
chr3 (542-603)||(35643219-35643280)
chr3 (542-606)||(21581044-21581108)
chr3 (542-606)||(29445490-29445554)
chr3 (542-606)||(32244122-32244186)
chr3 (542-606)||(35226449-35226513)
chr3 (542-606)||(42308027-42308091)
chr3 (542-606)||(54534448-54534512)
chr3 (542-606)||(54870296-54870360)
chr3 (545-606)||(34700346-34700407)
chr3 (546-606)||(12117780-12117840)
chr3 (542-606)||(20699151-20699215)
chr3 (542-606)||(22175112-22175176)
chr3 (542-606)||(38856095-38856159)
chr3 (542-606)||(38933948-38934011)
chr3 (542-606)||(44609455-44609519)
chr3 (542-606)||(50528931-50528995)
chr3 (542-606)||(15520638-15520702)
chr3 (542-606)||(26122816-26122880)
chr3 (542-606)||(46452284-46452348)
chr3 (542-606)||(50529895-50529959)
chr3 (532-606)||(25494407-25494482)
chr3 (544-606)||(42105093-42105155)
chr3 (546-606)||(2895191-2895251)
chr3 (542-606)||(32359261-32359325)
chr3 (542-602)||(53028227-53028287)
[»] chr6 (20 HSPs)
chr6 (542-606)||(3347659-3347723)
chr6 (542-606)||(33463708-33463772)
chr6 (542-606)||(2837552-2837616)
chr6 (542-606)||(30691858-30691922)
chr6 (532-606)||(20726787-20726862)
chr6 (542-606)||(3955902-3955966)
chr6 (542-606)||(6086735-6086799)
chr6 (542-602)||(9459570-9459630)
chr6 (542-606)||(17261209-17261273)
chr6 (542-606)||(26947012-26947076)
chr6 (545-606)||(1153603-1153664)
chr6 (542-606)||(52843-52907)
chr6 (542-606)||(11167247-11167311)
chr6 (542-606)||(18613545-18613609)
chr6 (542-606)||(26704475-26704539)
chr6 (542-606)||(34887428-34887492)
chr6 (546-606)||(35198295-35198354)
chr6 (552-606)||(21893472-21893526)
chr6 (542-606)||(16307144-16307208)
chr6 (542-606)||(30699065-30699129)
[»] chr5 (24 HSPs)
chr5 (542-606)||(1165737-1165801)
chr5 (542-606)||(9008193-9008257)
chr5 (542-606)||(24105807-24105871)
chr5 (542-606)||(1579044-1579108)
chr5 (542-606)||(1605707-1605771)
chr5 (542-606)||(8374474-8374538)
chr5 (542-606)||(27420866-27420930)
chr5 (542-606)||(27679305-27679369)
chr5 (542-606)||(3386622-3386686)
chr5 (542-606)||(16069361-16069425)
chr5 (542-606)||(19358534-19358598)
chr5 (542-606)||(33284711-33284775)
chr5 (542-606)||(33491332-33491396)
chr5 (542-606)||(35782780-35782844)
chr5 (542-606)||(4120945-4121009)
chr5 (546-606)||(16737583-16737643)
chr5 (546-606)||(33991152-33991212)
chr5 (542-606)||(38598586-38598650)
chr5 (542-606)||(20992417-20992485)
chr5 (546-606)||(20992282-20992342)
chr5 (542-606)||(31883152-31883216)
chr5 (532-606)||(5202969-5203044)
chr5 (568-606)||(26603078-26603116)
chr5 (542-606)||(3921589-3921653)
[»] chr7 (31 HSPs)
chr7 (532-606)||(33359216-33359291)
chr7 (542-606)||(3511329-3511393)
chr7 (542-606)||(33846650-33846714)
chr7 (532-606)||(22649820-22649895)
chr7 (542-606)||(12101304-12101368)
chr7 (542-606)||(20346494-20346558)
chr7 (542-606)||(30181150-30181214)
chr7 (542-606)||(42965122-42965186)
chr7 (542-606)||(43156719-43156783)
chr7 (545-606)||(6394760-6394821)
chr7 (546-606)||(933295-933355)
chr7 (542-602)||(1803032-1803092)
chr7 (542-606)||(4477447-4477511)
chr7 (542-606)||(5280866-5280930)
chr7 (542-606)||(32041548-32041612)
chr7 (542-606)||(43068099-43068163)
chr7 (542-606)||(7164190-7164254)
chr7 (542-606)||(9452596-9452660)
chr7 (542-606)||(12097716-12097780)
chr7 (542-606)||(15655918-15655982)
chr7 (546-606)||(19828280-19828340)
chr7 (542-606)||(24792458-24792522)
chr7 (542-606)||(37704986-37705050)
chr7 (542-606)||(42673471-42673535)
chr7 (542-606)||(42204160-42204225)
chr7 (542-606)||(4347279-4347343)
chr7 (542-606)||(37005937-37006001)
chr7 (534-606)||(25748484-25748557)
chr7 (542-606)||(36890956-36891019)
chr7 (542-606)||(43021702-43021766)
chr7 (542-606)||(46134430-46134494)
[»] chr4 (48 HSPs)
chr4 (533-606)||(19913754-19913828)
chr4 (530-606)||(50353793-50353870)
chr4 (542-606)||(14987797-14987861)
chr4 (542-606)||(20877052-20877116)
chr4 (542-606)||(23776583-23776647)
chr4 (542-606)||(30423688-30423752)
chr4 (531-606)||(38055150-38055226)
chr4 (542-606)||(50055225-50055289)
chr4 (542-606)||(54412633-54412697)
chr4 (542-606)||(16700786-16700850)
chr4 (542-606)||(30171585-30171649)
chr4 (542-606)||(53717588-53717652)
chr4 (542-606)||(53875662-53875726)
chr4 (542-606)||(54189550-54189614)
chr4 (545-606)||(28032836-28032897)
chr4 (542-606)||(1617089-1617153)
chr4 (542-606)||(1756888-1756952)
chr4 (542-606)||(2481532-2481596)
chr4 (542-606)||(6611484-6611548)
chr4 (542-606)||(6688745-6688809)
chr4 (542-606)||(8932302-8932366)
chr4 (542-606)||(15241152-15241216)
chr4 (542-606)||(15669188-15669252)
chr4 (542-606)||(23265881-23265945)
chr4 (542-606)||(23704333-23704397)
chr4 (542-606)||(28360435-28360499)
chr4 (542-606)||(44785041-44785105)
chr4 (542-606)||(48909851-48909915)
chr4 (542-606)||(19165095-19165160)
chr4 (542-606)||(27488772-27488836)
chr4 (546-606)||(37464730-37464790)
chr4 (546-606)||(40428844-40428904)
chr4 (542-602)||(40680166-40680226)
chr4 (542-606)||(43290084-43290148)
chr4 (542-606)||(50053448-50053512)
chr4 (545-606)||(37968881-37968942)
chr4 (542-606)||(11639702-11639766)
chr4 (542-606)||(27583756-27583820)
chr4 (546-606)||(33703850-33703910)
chr4 (542-606)||(35490897-35490961)
chr4 (546-606)||(38071444-38071504)
chr4 (542-606)||(44379311-44379375)
chr4 (542-606)||(45424658-45424722)
chr4 (542-606)||(52139208-52139272)
chr4 (547-606)||(8591216-8591275)
chr4 (551-606)||(44548265-44548320)
chr4 (552-606)||(31969696-31969750)
chr4 (546-606)||(55344949-55345009)
[»] chr1 (42 HSPs)
chr1 (534-606)||(42370931-42371004)
chr1 (542-606)||(1170580-1170644)
chr1 (542-606)||(26663263-26663327)
chr1 (542-606)||(29078521-29078585)
chr1 (542-606)||(38829074-38829138)
chr1 (534-606)||(970662-970735)
chr1 (542-606)||(1168508-1168572)
chr1 (542-606)||(1940883-1940947)
chr1 (542-606)||(5215390-5215454)
chr1 (542-606)||(8079845-8079909)
chr1 (542-606)||(16052101-16052165)
chr1 (542-606)||(19715297-19715361)
chr1 (542-606)||(20089476-20089540)
chr1 (542-606)||(26580406-26580470)
chr1 (542-606)||(29288154-29288218)
chr1 (542-606)||(33510489-33510553)
chr1 (542-606)||(39260482-39260546)
chr1 (542-606)||(52753283-52753347)
chr1 (542-606)||(8120874-8120938)
chr1 (542-606)||(25897379-25897443)
chr1 (542-606)||(40092496-40092560)
chr1 (542-606)||(43905659-43905723)
chr1 (542-606)||(46760971-46761035)
chr1 (542-606)||(52696796-52696860)
chr1 (534-602)||(51359356-51359425)
chr1 (542-606)||(12682825-12682889)
chr1 (542-606)||(15554280-15554344)
chr1 (546-606)||(23498469-23498529)
chr1 (542-606)||(32671584-32671648)
chr1 (542-606)||(41928631-41928695)
chr1 (553-606)||(17587641-17587694)
chr1 (542-606)||(2347661-2347725)
chr1 (542-606)||(2473727-2473791)
chr1 (542-606)||(6765464-6765528)
chr1 (542-606)||(13996859-13996923)
chr1 (542-606)||(46409440-46409504)
chr1 (542-606)||(49146177-49146241)
chr1 (532-605)||(15203106-15203180)
chr1 (542-606)||(17591696-17591757)
chr1 (542-606)||(5675110-5675174)
chr1 (542-606)||(15717790-15717854)
chr1 (542-606)||(52086272-52086336)
[»] scaffold0012 (1 HSPs)
scaffold0012 (542-606)||(36710-36774)
[»] scaffold0482 (1 HSPs)
scaffold0482 (542-606)||(431-495)
[»] scaffold0167 (1 HSPs)
scaffold0167 (542-606)||(23087-23151)
[»] scaffold0920 (1 HSPs)
scaffold0920 (542-606)||(3715-3779)
[»] scaffold0018 (1 HSPs)
scaffold0018 (542-606)||(145381-145445)
[»] scaffold1777 (1 HSPs)
scaffold1777 (546-606)||(142-202)
[»] scaffold0172 (1 HSPs)
scaffold0172 (542-606)||(10243-10307)


Alignment Details
Target: chr8 (Bit Score: 482; Significance: 0; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 482; E-Value: 0
Query Start/End: Original strand, 17 - 534
Target Start/End: Complemental strand, 43804433 - 43803916
Alignment:
Q  17 aactgctattctggtgacatcgattacaccatggacattgggtgtcgatattattaacccctatgtcaaccaatctagagtgtgtaggcagacaattctt 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43804433 aactgctattctggtgacatcgattacaccatggacattgggtgtcgatattattaacccctatgtcaaccaatctagagtgtgtaggcagacaattctt 43804334  T
Q  117 tgttgtaccttcgaatgaacaattagctgccacaaggtctatcaacttcctataactgtcaaatttgtatttttgacatgcttagtcaagcaaaaccaat 216  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  43804333 tgttgtaccttcgaatgaacaattagctgccacaaggtctatcaacttcctataactgtcaaatttgtatttttgacaagcttagtcaagcaaaaccaat 43804234  T
Q  217 atgtcgagcgcagactatactcgccatggatatggtttccaaattagttcatcgtagaccacaaagttaaatagaggagttcagacaacatcattaacag 316  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43804233 atgttgagcgcagactatactcgccatggatatggtttccaaattagttcatcgtagaccacaaagttaaatagaggagttcagacaacatcattaacag 43804134  T
Q  317 actgaaggctcaaatatacacacaaagcctggatgttatttttacaaataatgaaaaacctcaacataaaaagcctggatatctttctaacctatcaaga 416  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43804133 actgaaggctcaaatatacacacaaagcctggatgttatttttacaaataatgaaaaacctcaacataaaaagcctggatatctttctaacctatcaaga 43804034  T
Q  417 aaaacctggatannnnnnnnacaaataatgaggtagacttgatatctctcattaatcccatctcaacaaatattgaaaagccgcaatcatctccttttat 516  Q
    ||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  43804033 aaaacctggatattttttttacaaataatgaggtagacttgatatctctcattaatcccatctcaataaatattgaaaagccgcaatcatctccttttat 43803934  T
Q  517 attatctaaagactatat 534  Q
    ||||||||||||||||||    
T  43803933 attatctaaagactatat 43803916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 534 - 606
Target Start/End: Original strand, 29938059 - 29938132
Alignment:
Q  534 tggccccgtt-ggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    |||||||||| ||||||||||||||||||| |||||| ||||||||||| ||||||||||||||||||||||||    
T  29938059 tggccccgtttggattggcttattttgagcttatgtgggcttatatactcccataagcctttttaaaggtgttt 29938132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 542 - 606
Target Start/End: Original strand, 18594544 - 18594608
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||| |||||| |||||| |||| ||||||||||||||||||||||||    
T  18594544 ttggattggcttattttgagcttatgtgggcttatctactcccataagcctttttaaaggtgttt 18594608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 542 - 606
Target Start/End: Complemental strand, 34842565 - 34842501
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||| |||||| |||||| |||| ||||||||||||||||||||||||    
T  34842565 ttggattggcttattttgagcttatgtgggcttatctactcccataagcctttttaaaggtgttt 34842501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 542 - 606
Target Start/End: Original strand, 39206593 - 39206657
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||| |||||| |||||| |||| ||||||||||||||||||||||||    
T  39206593 ttggattggcttattttgagcttatgtgggcttatctactcccataagcctttttaaaggtgttt 39206657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 532 - 606
Target Start/End: Original strand, 14422699 - 14422774
Alignment:
Q  532 tatggccccgtt-ggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    |||||||||||| ||||||| ||||||||||| |||||| |||||| |||| ||||||||||||||||||||||||    
T  14422699 tatggccccgtttggattggtttattttgagcttatgtgggcttatctactcccataagcctttttaaaggtgttt 14422774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 534 - 606
Target Start/End: Original strand, 5320562 - 5320635
Alignment:
Q  534 tggccccgtt-ggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    |||||||||| ||||||||||||||||||| |||||||| |||| |||| |||||||||||||||||| |||||    
T  5320562 tggccccgtttggattggcttattttgagcttatgtgagtttatctactcccataagcctttttaaagttgttt 5320635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 534 - 606
Target Start/End: Complemental strand, 35118240 - 35118167
Alignment:
Q  534 tggccccgtt-ggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    |||||||||| ||||||||||||||||||| |||||| |||||| |||| ||||||||||||| ||||||||||    
T  35118240 tggccccgtttggattggcttattttgagcttatgtgggcttatctactcccataagccttttgaaaggtgttt 35118167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 542 - 606
Target Start/End: Original strand, 144401 - 144465
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    |||||||| |||||||||||||||||||  ||||| |||| ||||||||||||||||||||||||    
T  144401 ttggattgacttattttgagcatatgtggacttatctactcccataagcctttttaaaggtgttt 144465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 542 - 606
Target Start/End: Complemental strand, 2042724 - 2042660
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||| |||||| |||||| ||||  |||||||||||||||||||||||    
T  2042724 ttggattggcttattttgagcttatgtgggcttatctactctcataagcctttttaaaggtgttt 2042660  T

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Target: chr8; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 542 - 606
Target Start/End: Complemental strand, 10836955 - 10836891
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||| |||||| |||||| |||| ||||||| ||||||||||||||||    
T  10836955 ttggattggcttattttgagcttatgtgggcttatctactcccataagtctttttaaaggtgttt 10836891  T

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Target: chr8; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 542 - 606
Target Start/End: Original strand, 13110411 - 13110475
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||| |||||| |||||| |||| ||||| ||||||||||||||||||    
T  13110411 ttggattggcttattttgagcttatgtgggcttatctactcccatatgcctttttaaaggtgttt 13110475  T

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Target: chr8; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 542 - 606
Target Start/End: Complemental strand, 22260830 - 22260766
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||| ||||||||||||| |||| ||||||| ||||||||||| ||||    
T  22260830 ttggattggcttattttgagcttatgtgagcttatctactcccataagtctttttaaaggcgttt 22260766  T

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Target: chr8; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 542 - 606
Target Start/End: Complemental strand, 26783933 - 26783869
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||| |||||| |||||| ||||  |||||||||||||||||||||||    
T  26783933 ttggattggcttattttgagcttatgtgggcttatctactctcataagcctttttaaaggtgttt 26783869  T

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Target: chr8; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 542 - 606
Target Start/End: Complemental strand, 34679657 - 34679593
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||| ||| || |||||| |||| ||||||||||||||||||||||||    
T  34679657 ttggattggcttattttgagcttatatgggcttatctactcccataagcctttttaaaggtgttt 34679593  T

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Target: chr8; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 542 - 606
Target Start/End: Original strand, 39218784 - 39218848
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||| |||||| |||||| ||||  |||||||||||||||||||||||    
T  39218784 ttggattggcttattttgagcttatgtgggcttatctactctcataagcctttttaaaggtgttt 39218848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 542 - 606
Target Start/End: Original strand, 42571601 - 42571665
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||| |||||| | |||| |||||||||||||||||||||| ||||||    
T  42571601 ttggattggcttattttgagcttatgtgggtttatctacttccataagcctttttaaaagtgttt 42571665  T

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Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 542 - 606
Target Start/End: Original strand, 7791418 - 7791482
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||  |||||||| |||| |||| ||||||| ||||||||||||||||    
T  7791418 ttggattggcttattttgagtttatgtgagtttatctactcccataagtctttttaaaggtgttt 7791482  T

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Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 542 - 606
Target Start/End: Original strand, 8021726 - 8021790
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||| ||| || |||||| |||| |||||||||||||||||| |||||    
T  8021726 ttggattggcttattttgagcttatatgggcttatctactcccataagcctttttaaagatgttt 8021790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 542 - 606
Target Start/End: Complemental strand, 24113366 - 24113302
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    |||||||| |||||||||||| |||||| |||||| |||| |||||| |||||||||||||||||    
T  24113366 ttggattgacttattttgagcttatgtgggcttatctactcccataaccctttttaaaggtgttt 24113302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 542 - 606
Target Start/End: Complemental strand, 40118052 - 40117988
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||| |||||| | |||| |||| ||||||||||||||||| ||||||    
T  40118052 ttggattggcttattttgagcttatgtgggtttatctactcccataagcctttttaaaagtgttt 40117988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 542 - 606
Target Start/End: Original strand, 41575520 - 41575584
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||| |||||   ||||| |||| ||||||||||||||||||||||||    
T  41575520 ttggattggcttattttgagcttatgtagacttatctactcccataagcctttttaaaggtgttt 41575584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 545 - 606
Target Start/End: Original strand, 7812005 - 7812066
Alignment:
Q  545 gattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    |||||||||||||||||  |||||||| |||| ||||||||| || ||||||||||||||||    
T  7812005 gattggcttattttgagtttatgtgagtttatctacttccattagtctttttaaaggtgttt 7812066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 542 - 606
Target Start/End: Original strand, 5005173 - 5005237
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    |||||||||||||| || ||| |||||| |||||| ||||||||||||| |||||||||| ||||    
T  5005173 ttggattggcttatcttaagcttatgtgggcttatctacttccataagcttttttaaaggcgttt 5005237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 545 - 606
Target Start/End: Original strand, 7774774 - 7774835
Alignment:
Q  545 gattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    |||||||||||||||||| |||| | | |||| |||| ||||||| ||||||||||||||||    
T  7774774 gattggcttattttgagcttatgcgggtttatctactcccataagtctttttaaaggtgttt 7774835  T

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Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 542 - 606
Target Start/End: Original strand, 33278407 - 33278471
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||  ||| ||  ||||| ||||| |||||| ||||||||||||||||    
T  33278407 ttggattggcttattttgagtttatatggacttatctactttcataagtctttttaaaggtgttt 33278471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 542 - 606
Target Start/End: Complemental strand, 33287225 - 33287161
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    |||||||| |||||||||||| |||||| | |||| |||| ||||| || |||||||||||||||    
T  33287225 ttggattgacttattttgagcttatgtgggtttatctactcccatatgcttttttaaaggtgttt 33287161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 542 - 606
Target Start/End: Complemental strand, 38167355 - 38167291
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    |||||||||| |||||||||  |||||| |||||| || | ||||||| ||||||||||||||||    
T  38167355 ttggattggcctattttgagtttatgtgggcttatctattcccataagtctttttaaaggtgttt 38167291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 546 - 606
Target Start/End: Complemental strand, 44805140 - 44805080
Alignment:
Q  546 attggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||| |||||  | |||| |||| |||||||| |||||||||||||||    
T  44805140 attggcttattttgagcttatgtaggtttatctactcccataagcatttttaaaggtgttt 44805080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 543 - 606
Target Start/End: Complemental strand, 34999095 - 34999032
Alignment:
Q  543 tggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    |||||||||||||||||||| |||  | | |||| |||| | ||||||||||||||||||||||    
T  34999095 tggattggcttattttgagcttatacgggtttatctactcctataagcctttttaaaggtgttt 34999032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 542 - 598
Target Start/End: Complemental strand, 6144473 - 6144417
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaa 598  Q
    |||||||| |||||||||||| ||| || |||||| |||| ||||| ||||||||||    
T  6144473 ttggattgacttattttgagcttatatgggcttatctactcccatatgcctttttaa 6144417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 542 - 606
Target Start/End: Original strand, 9806880 - 9806944
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    |||||||| |||||||||||  ||| || |||||| |||| ||||| ||||||||||| ||||||    
T  9806880 ttggattgacttattttgagtttatatgtgcttatctactcccatatgcctttttaaatgtgttt 9806944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 546 - 606
Target Start/End: Original strand, 39220267 - 39220327
Alignment:
Q  546 attggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    |||| |||||||||||| ||| ||| ||||| ||| |||||| | ||||||||||||||||    
T  39220267 attgacttattttgagcttatatgaacttatctacatccatatgtctttttaaaggtgttt 39220327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 57; Significance: 2e-23; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 542 - 606
Target Start/End: Complemental strand, 6175028 - 6174964
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||    
T  6175028 ttggattggcttattttgagcttatgtgagcttatatactcccataagcctttttaaaggtgttt 6174964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 542 - 606
Target Start/End: Original strand, 4016044 - 4016108
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||| |||||||| |||| |||| ||||||||||||||||||||||||    
T  4016044 ttggattggcttattttgagcttatgtgagtttatctactcccataagcctttttaaaggtgttt 4016108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 542 - 606
Target Start/End: Complemental strand, 30420367 - 30420303
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||| |||||| |||||| |||| ||||||||||||||||||||||||    
T  30420367 ttggattggcttattttgagcttatgtgggcttatctactcccataagcctttttaaaggtgttt 30420303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 531 - 606
Target Start/End: Complemental strand, 31517427 - 31517351
Alignment:
Q  531 atatggccccgtt-ggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||| ||||||||||||||||||| ||| || |||||| |||| ||||||||||||||||||||||||    
T  31517427 atatggccccgtttggattggcttattttgagcttatttgggcttatctactcccataagcctttttaaaggtgttt 31517351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 542 - 606
Target Start/End: Original strand, 42937724 - 42937788
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||| |||||||| |||| || ||||||||||||||||||||||||||    
T  42937724 ttggattggcttattttgagcttatgtgagtttatctatttccataagcctttttaaaggtgttt 42937788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 542 - 606
Target Start/End: Complemental strand, 3873444 - 3873380
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||| |||||| |||||| ||||  |||||||||||||||||||||||    
T  3873444 ttggattggcttattttgagcttatgtgggcttatctactctcataagcctttttaaaggtgttt 3873380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 542 - 606
Target Start/End: Complemental strand, 18807084 - 18807020
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||| ||| ||||||||| ||||  |||||||||||||||||||||||    
T  18807084 ttggattggcttattttgagcttatatgagcttatctactctcataagcctttttaaaggtgttt 18807020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 542 - 606
Target Start/End: Complemental strand, 19901337 - 19901273
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||| |||||| |||| | |||||||||||||||||||||| ||||||    
T  19901337 ttggattggcttattttgagcttatgtgggcttctctacttccataagcctttttaaaagtgttt 19901273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 535 - 606
Target Start/End: Original strand, 1108277 - 1108348
Alignment:
Q  535 ggccccgttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||| |  ||||||||||||||| |||||| |||||| |||| ||||||||||||||||||||||||    
T  1108277 ggccccgtttggatggcttattttgagcttatgtgggcttatctactcccataagcctttttaaaggtgttt 1108348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 542 - 606
Target Start/End: Complemental strand, 4232342 - 4232278
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    |||||||||||||||||| || |||||| |||||| |||||||||||| ||||||||| ||||||    
T  4232342 ttggattggcttattttgtgcttatgtgggcttatctacttccataagtctttttaaatgtgttt 4232278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 542 - 606
Target Start/End: Complemental strand, 28330037 - 28329973
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    |||||||| |||||||||||| |||||| |||||| |||  ||||||||||||||||||||||||    
T  28330037 ttggattgacttattttgagcttatgtgggcttatctacacccataagcctttttaaaggtgttt 28329973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 542 - 606
Target Start/End: Complemental strand, 33906247 - 33906183
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    |||||||| |||||||||| | |||||| |||||| |||| ||||||||||||||||||||||||    
T  33906247 ttggattgacttattttgaacttatgtgggcttatctactcccataagcctttttaaaggtgttt 33906183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 542 - 606
Target Start/End: Original strand, 39635457 - 39635521
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||| ||||||||||||| ||||||  ||||| |||| ||||||||||||||||||||||||    
T  39635457 ttggattagcttattttgagcttatgtggacttatctactcccataagcctttttaaaggtgttt 39635521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 545 - 606
Target Start/End: Original strand, 5733407 - 5733468
Alignment:
Q  545 gattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    |||||| ||||||||||| |||||| |||||| |||| |||| |||||||||||||||||||    
T  5733407 gattggtttattttgagcttatgtgggcttatctactcccatcagcctttttaaaggtgttt 5733468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 542 - 606
Target Start/End: Complemental strand, 30270879 - 30270815
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||| ||| ||| |||| |||| |||| ||||||||||||||||| ||||||    
T  30270879 ttggattggcttattttaagcttatatgagtttatctactcccataagcctttttaaaagtgttt 30270815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 545 - 606
Target Start/End: Complemental strand, 1483099 - 1483039
Alignment:
Q  545 gattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    |||||||||||||||||| |||||| |||||| ||| ||||||||| |||||||| ||||||    
T  1483099 gattggcttattttgagcttatgtgggcttatctac-tccataagcttttttaaaagtgttt 1483039  T

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Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 542 - 606
Target Start/End: Complemental strand, 26323386 - 26323322
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||| ||||||||||| ||||||  ||||| |||| ||||||| |||||||||| |||||    
T  26323386 ttggattggtttattttgagcttatgtggacttatctactcccataagtctttttaaagatgttt 26323322  T

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Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 542 - 600
Target Start/End: Complemental strand, 16588976 - 16588918
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaag 600  Q
    |||||||||||||||||| |  |||||| |||||| ||||| |||||| ||||||||||    
T  16588976 ttggattggcttattttgtgtttatgtgggcttatctactttcataagtctttttaaag 16588918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 542 - 606
Target Start/End: Original strand, 851002 - 851066
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||| ||||||||| ||| |||||  |||||| ||||  |||||||||||||||| ||||||    
T  851002 ttggatttgcttattttaagcttatgtaggcttatctactctcataagcctttttaaaagtgttt 851066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 546 - 606
Target Start/End: Complemental strand, 16066490 - 16066430
Alignment:
Q  546 attggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||| |||||| |||||| | ||| |||||| |||||| || ||||||    
T  16066490 attggcttattttgagcttatgtgggcttatctgctttcataagtcttttttaaagtgttt 16066430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 542 - 606
Target Start/End: Complemental strand, 42446769 - 42446705
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    |||||||||||||||  |||  |||| || ||||| ||||  |||||||||||||||||||||||    
T  42446769 ttggattggcttattcggagtttatgcgaacttatctactaacataagcctttttaaaggtgttt 42446705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 546 - 606
Target Start/End: Complemental strand, 44947738 - 44947678
Alignment:
Q  546 attggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||| | |||||||| |||| || | |||||||| |||||||| ||||||    
T  44947738 attggcttattttgatcttatgtgagtttatctagtgccataagcatttttaaaagtgttt 44947678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 56; Significance: 7e-23; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 532 - 606
Target Start/End: Original strand, 25999379 - 25999454
Alignment:
Q  532 tatggccccgtt-ggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    |||||||||||| ||||||||||||||||||| |||||| |||||| |||||||||||||||||||||||||||||    
T  25999379 tatggccccgtttggattggcttattttgagcttatgtgggcttatctacttccataagcctttttaaaggtgttt 25999454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 542 - 606
Target Start/End: Original strand, 8042609 - 8042673
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    |||||| |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||    
T  8042609 ttggatgggcttattttgagcttatgtgagcttatctacttccataagcctttttaaaggtgttt 8042673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 542 - 606
Target Start/End: Complemental strand, 15520328 - 15520264
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||| |||||| |||||| |||| ||||||||||||||||||||||||    
T  15520328 ttggattggcttattttgagcttatgtgggcttatctactcccataagcctttttaaaggtgttt 15520264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 542 - 606
Target Start/End: Complemental strand, 20842534 - 20842470
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||| ||||||||||||| ||||  |||||||||||||||||||||||    
T  20842534 ttggattggcttattttgagcttatgtgagcttatctactcgcataagcctttttaaaggtgttt 20842470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 542 - 606
Target Start/End: Complemental strand, 37698329 - 37698265
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||| |||||| |||||| |||| ||||||||||||||||||||||||    
T  37698329 ttggattggcttattttgagcttatgtgggcttatctactcccataagcctttttaaaggtgttt 37698265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 542 - 603
Target Start/End: Original strand, 35643219 - 35643280
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtg 603  Q
    |||||||| |||||||||||| ||||||| ||||| ||||||||||||||||||||||||||    
T  35643219 ttggattgacttattttgagcttatgtgaacttatctacttccataagcctttttaaaggtg 35643280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 542 - 606
Target Start/End: Original strand, 21581044 - 21581108
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    |||||||| |||||||||||| |||||| |||||| |||| ||||||||||||||||||||||||    
T  21581044 ttggattgacttattttgagcttatgtgggcttatctactcccataagcctttttaaaggtgttt 21581108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 542 - 606
Target Start/End: Original strand, 29445490 - 29445554
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||| |||||||| |||| |||| ||||||||||||||||| ||||||    
T  29445490 ttggattggcttattttgagcttatgtgagtttatctactcccataagcctttttaaatgtgttt 29445554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 542 - 606
Target Start/End: Original strand, 32244122 - 32244186
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||| ||||||   |||| |||||||||||||||||||||||||||||    
T  32244122 ttggattggcttattttgagcttatgtggatttatctacttccataagcctttttaaaggtgttt 32244186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 542 - 606
Target Start/End: Original strand, 35226449 - 35226513
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    |||||||||| |||||||||| |||||| |||||| || ||||||||||||||||||||||||||    
T  35226449 ttggattggcctattttgagcttatgtgggcttatctatttccataagcctttttaaaggtgttt 35226513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 542 - 606
Target Start/End: Complemental strand, 42308091 - 42308027
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||| |||||| |||||| |||| ||||||||||||||||||| ||||    
T  42308091 ttggattggcttattttgagcttatgtgggcttatctactcccataagcctttttaaaggcgttt 42308027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 542 - 606
Target Start/End: Complemental strand, 54534512 - 54534448
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||| |||||| |||||| |||| |||||||| |||||||||||||||    
T  54534512 ttggattggcttattttgagcttatgtgggcttatctactcccataagcttttttaaaggtgttt 54534448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 542 - 606
Target Start/End: Complemental strand, 54870360 - 54870296
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||  |||||| | |||| |||||||||||||||||||||||||||||    
T  54870360 ttggattggcttattttgagtttatgtgggtttatctacttccataagcctttttaaaggtgttt 54870296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 545 - 606
Target Start/End: Original strand, 34700346 - 34700407
Alignment:
Q  545 gattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    |||||| ||||||||||| |||||| | |||| |||||||||||||||||||||||||||||    
T  34700346 gattggtttattttgagcttatgtgggtttatttacttccataagcctttttaaaggtgttt 34700407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 546 - 606
Target Start/End: Complemental strand, 12117840 - 12117780
Alignment:
Q  546 attggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||| |||||| |||||| || | ||||||||||||||||||||||||    
T  12117840 attggcttattttgagcttatgtgggcttatctattcccataagcctttttaaaggtgttt 12117780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 542 - 606
Target Start/End: Original strand, 20699151 - 20699215
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||| |||||| |||||| ||||  ||||||||||||| |||||||||    
T  20699151 ttggattggcttattttgagcttatgtgggcttatctactcgcataagcctttttgaaggtgttt 20699215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 542 - 606
Target Start/End: Complemental strand, 22175176 - 22175112
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||| |||||| |||||| ||||  ||||||||||||| |||||||||    
T  22175176 ttggattggcttattttgagcttatgtgggcttatctactcgcataagcctttttgaaggtgttt 22175112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 542 - 606
Target Start/End: Original strand, 38856095 - 38856159
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||| ||| || |||||| |||| |||||||| |||||||||||||||    
T  38856095 ttggattggcttattttgagcttatatgggcttatctactcccataagcttttttaaaggtgttt 38856159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 542 - 606
Target Start/End: Original strand, 38933948 - 38934011
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||| |||||| |||||| |||| ||||||||||||| ||||||||||    
T  38933948 ttggattggcttattttgagcttatgtg-gcttatctactcccataagccttttcaaaggtgttt 38934011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 542 - 606
Target Start/End: Complemental strand, 44609519 - 44609455
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||| ||||||  ||||| ||||| ||||||||||||| |||||||||    
T  44609519 ttggattggcttattttgagcttatgtggacttatctacttgcataagcctttttgaaggtgttt 44609455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 542 - 606
Target Start/End: Original strand, 50528931 - 50528995
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||| |||||| |||||| ||||  ||||||||||||| |||||||||    
T  50528931 ttggattggcttattttgagcttatgtgggcttatctactcgcataagcctttttgaaggtgttt 50528995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 542 - 606
Target Start/End: Original strand, 15520638 - 15520702
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||| |||||| | |||| ||||  ||||||||||||| |||||||||    
T  15520638 ttggattggcttattttgagcttatgtgggtttatctactcgcataagcctttttgaaggtgttt 15520702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 542 - 606
Target Start/End: Original strand, 26122816 - 26122880
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||| |||||| | |||| || | |||| |||||||||||||||||||    
T  26122816 ttggattggcttattttgagcttatgtgggtttatctattcccatgagcctttttaaaggtgttt 26122880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 542 - 606
Target Start/End: Complemental strand, 46452348 - 46452284
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    |||||||||||||  |||||| ||| || |||||| |||| ||||||||||||||||||||||||    
T  46452348 ttggattggcttaagttgagcttatatgggcttatctactcccataagcctttttaaaggtgttt 46452284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 542 - 606
Target Start/End: Complemental strand, 50529959 - 50529895
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    |||||||| |||||||||||  ||||||  ||||| |||| ||||||||||||||||||||||||    
T  50529959 ttggattgacttattttgagtttatgtggacttatctactcccataagcctttttaaaggtgttt 50529895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 532 - 606
Target Start/End: Complemental strand, 25494482 - 25494407
Alignment:
Q  532 tatggccccgtt-ggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    |||||||||||| |||||| |||||||||||| |||||| | |||| || | ||||||| ||||||||||||||||    
T  25494482 tatggccccgtttggattgacttattttgagcttatgtgggtttatctattcccataagtctttttaaaggtgttt 25494407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 544 - 606
Target Start/End: Complemental strand, 42105155 - 42105093
Alignment:
Q  544 ggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    |||||| |||||||||||| |||||| |||||| |||| |||||| | |||||||||||||||    
T  42105155 ggattgacttattttgagcttatgtgggcttatctactcccataaacatttttaaaggtgttt 42105093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 546 - 606
Target Start/End: Original strand, 2895191 - 2895251
Alignment:
Q  546 attggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    |||| |||||||||||| |||||| | |||| ||||  |||||||||||||||||||||||    
T  2895191 attgacttattttgagcttatgtgggtttatctactcgcataagcctttttaaaggtgttt 2895251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 542 - 606
Target Start/End: Original strand, 32359261 - 32359325
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||| ||||||   |||| || |||||||||| ||| |||||||||||    
T  32359261 ttggattggcttattttgagcttatgtggatttatctatttccataagcttttataaaggtgttt 32359325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 542 - 602
Target Start/End: Original strand, 53028227 - 53028287
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggt 602  Q
    |||||||| |||||||||||| |||||| |||||| || | ||||||| ||||||| ||||    
T  53028227 ttggattgacttattttgagcttatgtgggcttatctattcccataagtctttttagaggt 53028287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 53; Significance: 4e-21; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 542 - 606
Target Start/End: Complemental strand, 3347723 - 3347659
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||| |||||| |||||| |||||||||||||||||||||||||||||    
T  3347723 ttggattggcttattttgagcttatgtgggcttatctacttccataagcctttttaaaggtgttt 3347659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 542 - 606
Target Start/End: Original strand, 33463708 - 33463772
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||| ||||||||||||| |||| ||||||||||||||||||||||||    
T  33463708 ttggattggcttattttgagcttatgtgagcttatctactcccataagcctttttaaaggtgttt 33463772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 542 - 606
Target Start/End: Original strand, 2837552 - 2837616
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||| |||||| |||||| |||| ||||||||||||||||||||||||    
T  2837552 ttggattggcttattttgagcttatgtgggcttatctactcccataagcctttttaaaggtgttt 2837616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 542 - 606
Target Start/End: Original strand, 30691858 - 30691922
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||| |||||| |||||| |||| ||||||||||||||||||||||||    
T  30691858 ttggattggcttattttgagcttatgtgggcttatctactcccataagcctttttaaaggtgttt 30691922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 532 - 606
Target Start/End: Original strand, 20726787 - 20726862
Alignment:
Q  532 tatggccccgtt-ggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    |||||||||||| ||||||||||||||||||| ||| || |||||| |||| ||||||||||||||||||||||||    
T  20726787 tatggccccgtttggattggcttattttgagcttatatgggcttatctactcccataagcctttttaaaggtgttt 20726862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 542 - 606
Target Start/End: Complemental strand, 3955966 - 3955902
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||| |||||| | |||| |||| ||||||||||||||||||||||||    
T  3955966 ttggattggcttattttgagcttatgtgggtttatctactcccataagcctttttaaaggtgttt 3955902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 542 - 606
Target Start/End: Complemental strand, 6086799 - 6086735
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||| |||||| |||||| |||| |||||||| |||||||||||||||    
T  6086799 ttggattggcttattttgagcttatgtgggcttatctactcccataagcatttttaaaggtgttt 6086735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 542 - 602
Target Start/End: Original strand, 9459570 - 9459630
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggt 602  Q
    ||||||||||||||||||||  ||||||||||||| || ||||||||||||||||||||||    
T  9459570 ttggattggcttattttgagtttatgtgagcttatctatttccataagcctttttaaaggt 9459630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 542 - 606
Target Start/End: Complemental strand, 17261273 - 17261209
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||| |||||| |||||| |||| |||||||||||| |||||||||||    
T  17261273 ttggattggcttattttgagcttatgtgggcttatctactcccataagcctttctaaaggtgttt 17261209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 542 - 606
Target Start/End: Complemental strand, 26947076 - 26947012
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||| ||| || |||||| |||| ||||||||||||||||||||||||    
T  26947076 ttggattggcttattttgagcttatatgggcttatctactcccataagcctttttaaaggtgttt 26947012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 545 - 606
Target Start/End: Original strand, 1153603 - 1153664
Alignment:
Q  545 gattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    |||||||||||||| ||| |||||  |||||| |||||||||||||||||||||||||||||    
T  1153603 gattggcttattttaagcttatgttggcttatctacttccataagcctttttaaaggtgttt 1153664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 542 - 606
Target Start/End: Original strand, 52843 - 52907
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||| |||||| |||||| ||||  ||||||| |||||||||||||||    
T  52843 ttggattggcttattttgagcttatgtgggcttatctactaacataagcatttttaaaggtgttt 52907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 542 - 606
Target Start/End: Original strand, 11167247 - 11167311
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||| |||||| |||||| || || ||||||  |||||||||||||||    
T  11167247 ttggattggcttattttgagcttatgtgtgcttatttattttcataagtttttttaaaggtgttt 11167311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 542 - 606
Target Start/End: Original strand, 18613545 - 18613609
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    |||||||| |||||||||||| |||| |  ||||| |||| ||||||||||||||||||||||||    
T  18613545 ttggattgacttattttgagcttatgcggacttatctactcccataagcctttttaaaggtgttt 18613609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 542 - 606
Target Start/End: Complemental strand, 26704539 - 26704475
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||| ||||||||||| || ||| |||||| |||| | ||||||||||||||||||||||    
T  26704539 ttggattggtttattttgagcttacgtgggcttatctactcctataagcctttttaaaggtgttt 26704475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 542 - 606
Target Start/End: Complemental strand, 34887492 - 34887428
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    |||||||| |||||||||||| |||||| | |||| | || ||||||||||||||||||||||||    
T  34887492 ttggattgacttattttgagcttatgtgggtttatctcctcccataagcctttttaaaggtgttt 34887428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 546 - 606
Target Start/End: Original strand, 35198295 - 35198354
Alignment:
Q  546 attggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||| | |||||| |||||| |||||||||||| ||||||||||||||||    
T  35198295 attggcttattttgaacttatgtgggcttatctacttccataag-ctttttaaaggtgttt 35198354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 552 - 606
Target Start/End: Original strand, 21893472 - 21893526
Alignment:
Q  552 ttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||| |||||| | |||| |||| ||||||||||||||||||||||||    
T  21893472 ttattttgagcttatgtgggtttatctactcccataagcctttttaaaggtgttt 21893526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 542 - 606
Target Start/End: Complemental strand, 16307208 - 16307144
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    |||||||| |||||||||||| |||||  |||||| ||||  ||||||||||||| |||||||||    
T  16307208 ttggattgacttattttgagcttatgttggcttatctactcgcataagcctttttgaaggtgttt 16307144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 542 - 606
Target Start/End: Complemental strand, 30699129 - 30699065
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    |||||||| |||||| ||||  ||||||||||||| || ||| ||||| ||||||||||||||||    
T  30699129 ttggattgacttattatgagtttatgtgagcttatttatttctataagtctttttaaaggtgttt 30699065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 53; Significance: 4e-21; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 542 - 606
Target Start/End: Complemental strand, 1165801 - 1165737
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    |||||||| |||||||||||| ||||||||||||| |||||||||||||||||||||||||||||    
T  1165801 ttggattgacttattttgagcttatgtgagcttatctacttccataagcctttttaaaggtgttt 1165737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 542 - 606
Target Start/End: Complemental strand, 9008257 - 9008193
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||| |||||| |||||| |||| ||||||||||||||||||||||||    
T  9008257 ttggattggcttattttgagcttatgtgggcttatctactcccataagcctttttaaaggtgttt 9008193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 542 - 606
Target Start/End: Complemental strand, 24105871 - 24105807
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||| |||||| |||||| |||| ||||||||||||||||||||||||    
T  24105871 ttggattggcttattttgagcttatgtgggcttatctactcccataagcctttttaaaggtgttt 24105807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 542 - 606
Target Start/End: Original strand, 1579044 - 1579108
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||| ||| || |||||| |||| ||||||||||||||||||||||||    
T  1579044 ttggattggcttattttgagcttatatgggcttatctactcccataagcctttttaaaggtgttt 1579108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 542 - 606
Target Start/End: Complemental strand, 1605771 - 1605707
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||| ||| || |||||| |||| ||||||||||||||||||||||||    
T  1605771 ttggattggcttattttgagcttatatgggcttatctactcccataagcctttttaaaggtgttt 1605707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 542 - 606
Target Start/End: Complemental strand, 8374538 - 8374474
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    |||||||| |||||||| ||| |||||| |||||| |||||||||||||||||||||||||||||    
T  8374538 ttggattgccttattttaagcttatgtgggcttatctacttccataagcctttttaaaggtgttt 8374474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 542 - 606
Target Start/End: Original strand, 27420866 - 27420930
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||| ||| || |||||| |||| ||||||||||||||||||||||||    
T  27420866 ttggattggcttattttgagcttatatgggcttatctactcccataagcctttttaaaggtgttt 27420930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 542 - 606
Target Start/End: Complemental strand, 27679369 - 27679305
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||| |||||| |||||| ||||  |||||||||||||||||||||||    
T  27679369 ttggattggcttattttgagcttatgtgggcttatctactctcataagcctttttaaaggtgttt 27679305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 542 - 606
Target Start/End: Complemental strand, 3386686 - 3386622
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||| ||||||  ||||| ||||  |||||||||||||||||||||||    
T  3386686 ttggattggcttattttgagcttatgtggacttatctactctcataagcctttttaaaggtgttt 3386622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 542 - 606
Target Start/End: Original strand, 16069361 - 16069425
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    |||||||| |||||||||||| |||||  |||||| |||| ||||||||||||||||||||||||    
T  16069361 ttggattgacttattttgagcttatgtaggcttatctactcccataagcctttttaaaggtgttt 16069425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 542 - 606
Target Start/End: Original strand, 19358534 - 19358598
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    |||||||| |||||||||||| ||||||||||||| |||| | ||||||||||||||| ||||||    
T  19358534 ttggattgccttattttgagcttatgtgagcttatctactcctataagcctttttaaaagtgttt 19358598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 542 - 606
Target Start/End: Complemental strand, 33284775 - 33284711
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    |||||||| |||||||||||| ||| || |||||| |||| ||||||||||||||||||||||||    
T  33284775 ttggattgacttattttgagcttatatgggcttatctactcccataagcctttttaaaggtgttt 33284711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 542 - 606
Target Start/End: Complemental strand, 33491396 - 33491332
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||| |||||| | |||| ||||  |||||||||||||||||||||||    
T  33491396 ttggattggcttattttgagcttatgtgggtttatctactctcataagcctttttaaaggtgttt 33491332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 542 - 606
Target Start/End: Complemental strand, 35782844 - 35782780
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    |||||||| |||||||||||| |||||| |||||| ||||  |||||||||||||||||||||||    
T  35782844 ttggattgccttattttgagcttatgtgggcttatctactcgcataagcctttttaaaggtgttt 35782780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 542 - 606
Target Start/End: Original strand, 4120945 - 4121009
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||| ||||||||||||||| |||||| | |||| |||| ||||||||| ||||||||||||||    
T  4120945 ttggaatggcttattttgagcttatgtgggtttatctactcccataagcccttttaaaggtgttt 4121009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 546 - 606
Target Start/End: Complemental strand, 16737643 - 16737583
Alignment:
Q  546 attggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||| ||| || |||||| |||| |||||| |||||||||||||||||    
T  16737643 attggcttattttgagcttatatgggcttatctactcccataaacctttttaaaggtgttt 16737583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 546 - 606
Target Start/End: Original strand, 33991152 - 33991212
Alignment:
Q  546 attggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    |||| |||||||||||  ||||||  ||||| |||||||||||||||||||||||||||||    
T  33991152 attgacttattttgagtttatgtggacttatctacttccataagcctttttaaaggtgttt 33991212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 542 - 606
Target Start/End: Complemental strand, 38598650 - 38598586
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||| ||||| | ||||||||||||| ||||  |||||||||||||||| ||||||    
T  38598650 ttggattggcttactttgaacttatgtgagcttatctactctcataagcctttttaaatgtgttt 38598586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 542 - 606
Target Start/End: Complemental strand, 20992485 - 20992417
Alignment:
Q  542 ttggattggcttattttgagcatatgt----gagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||| |||||    | |||||| |||| ||||||||||||||||||||||||    
T  20992485 ttggattggcttattttgagcttatgtacatgggcttatctactcccataagcctttttaaaggtgttt 20992417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 546 - 606
Target Start/End: Complemental strand, 20992342 - 20992282
Alignment:
Q  546 attggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||| ||||||  ||||| |||| | ||||| ||||||||||||||||    
T  20992342 attggcttattttgagcttatgtggtcttatctactcctataagtctttttaaaggtgttt 20992282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 542 - 606
Target Start/End: Original strand, 31883152 - 31883216
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    |||||||| |||||||||||| ||||||  ||||| ||||  |||||| ||||||||||||||||    
T  31883152 ttggattgacttattttgagcttatgtggacttatctactctcataagtctttttaaaggtgttt 31883216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 532 - 606
Target Start/End: Original strand, 5202969 - 5203044
Alignment:
Q  532 tatggccccgtt-ggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    |||||||||||| |||||| |||||||||||  |||||  | |||| |||| ||||||| ||||||||||||||||    
T  5202969 tatggccccgtttggattgacttattttgagtttatgttggtttatctactcccataagtctttttaaaggtgttt 5203044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 568 - 606
Target Start/End: Complemental strand, 26603116 - 26603078
Alignment:
Q  568 tgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  26603116 tgagcttatctactcccataagcctttttaaaggtgttt 26603078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 542 - 606
Target Start/End: Original strand, 3921589 - 3921653
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||  ||||||||||  ||| || |||||| |||| ||||||| ||||||||||||||||    
T  3921589 ttggattgatttattttgagtttatatgggcttatctactcccataagtctttttaaaggtgttt 3921653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 52; Significance: 2e-20; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 532 - 606
Target Start/End: Complemental strand, 33359291 - 33359216
Alignment:
Q  532 tatggccccgtt-ggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    |||||||||||| ||||||||||||||||||| |||||| |||||| ||||||||||||||||||| |||||||||    
T  33359291 tatggccccgtttggattggcttattttgagcttatgtgggcttatctacttccataagcctttttgaaggtgttt 33359216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 542 - 606
Target Start/End: Original strand, 3511329 - 3511393
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    |||||||| |||||||||||| |||||| |||||| |||||||||||||||||||||||||||||    
T  3511329 ttggattgtcttattttgagcttatgtgggcttatctacttccataagcctttttaaaggtgttt 3511393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 542 - 606
Target Start/End: Complemental strand, 33846714 - 33846650
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||| |||||| |||||| |||| ||||||||||||||||||||||||    
T  33846714 ttggattggcttattttgagcttatgtgggcttatctactcccataagcctttttaaaggtgttt 33846650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 532 - 606
Target Start/End: Complemental strand, 22649895 - 22649820
Alignment:
Q  532 tatggccccgttgga-ttggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    |||||||||||| || |||||||||||||||| |||||| |||||| |||| ||||||||||||||||||||||||    
T  22649895 tatggccccgtttgaattggcttattttgagcttatgtgggcttatctactcccataagcctttttaaaggtgttt 22649820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 542 - 606
Target Start/End: Complemental strand, 12101368 - 12101304
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||| |||||| | |||| |||| ||||||||||||||||||||||||    
T  12101368 ttggattggcttattttgagcttatgtgggtttatctactcccataagcctttttaaaggtgttt 12101304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 542 - 606
Target Start/End: Original strand, 20346494 - 20346558
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||| |||||| |||||| ||||  |||||||||||||||||||||||    
T  20346494 ttggattggcttattttgagcttatgtgggcttatctactctcataagcctttttaaaggtgttt 20346558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 542 - 606
Target Start/End: Complemental strand, 30181214 - 30181150
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||| |||||| |||||| |||| ||||||| ||||||||||||||||    
T  30181214 ttggattggcttattttgagcttatgtgggcttatctactcccataagtctttttaaaggtgttt 30181150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 542 - 606
Target Start/End: Complemental strand, 42965186 - 42965122
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||| |||||| |||||| |||| ||||||| ||||||||||||||||    
T  42965186 ttggattggcttattttgagcttatgtgggcttatctactcccataagtctttttaaaggtgttt 42965122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 542 - 606
Target Start/End: Original strand, 43156719 - 43156783
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||| |||||| |||||| || | ||||||||||||||||||||||||    
T  43156719 ttggattggcttattttgagcttatgtgggcttatctattcccataagcctttttaaaggtgttt 43156783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 545 - 606
Target Start/End: Original strand, 6394760 - 6394821
Alignment:
Q  545 gattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    |||||||||||||||||| |||||| |||||| || | ||||||||||||||||||||||||    
T  6394760 gattggcttattttgagcttatgtgggcttatctattcccataagcctttttaaaggtgttt 6394821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 546 - 606
Target Start/End: Original strand, 933295 - 933355
Alignment:
Q  546 attggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    |||||||||||||||||  |||||  ||||| |||||||||||||||||||||||||||||    
T  933295 attggcttattttgagctcatgtggacttatctacttccataagcctttttaaaggtgttt 933355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 542 - 602
Target Start/End: Original strand, 1803032 - 1803092
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggt 602  Q
    |||||||| |||||||||||| |||||| |||||| |||| ||||||||||||||||||||    
T  1803032 ttggattgacttattttgagcttatgtgggcttatctactcccataagcctttttaaaggt 1803092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 542 - 606
Target Start/End: Complemental strand, 4477511 - 4477447
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||| |||||| |||||| |||| ||||||| ||||| ||||||||||    
T  4477511 ttggattggcttattttgagcttatgtgggcttatctactcccataagtcttttcaaaggtgttt 4477447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 542 - 606
Target Start/End: Original strand, 5280866 - 5280930
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||| ||||||||||||| || |  |||||| ||||||||||||||||    
T  5280866 ttggattggcttattttgagcttatgtgagcttatctattcacataagtctttttaaaggtgttt 5280930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 542 - 606
Target Start/End: Original strand, 32041548 - 32041612
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    |||||||||||||||||| || |||||| |||||| |||||||||||| ||||||||| ||||||    
T  32041548 ttggattggcttattttgtgcttatgtgggcttatctacttccataagtctttttaaatgtgttt 32041612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 542 - 606
Target Start/End: Complemental strand, 43068163 - 43068099
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    |||||||| |||||||||||| ||| || |||||| |||| ||||||||||||||||||||||||    
T  43068163 ttggattgacttattttgagcttatatgggcttatctactcccataagcctttttaaaggtgttt 43068099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 542 - 606
Target Start/End: Original strand, 7164190 - 7164254
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||| ||| || |||||| |||| |||||||  |||||||||||||||    
T  7164190 ttggattggcttattttgagcttatatgggcttatctactcccataagtttttttaaaggtgttt 7164254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 542 - 606
Target Start/End: Original strand, 9452596 - 9452660
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    |||||||| |||||||||||| ||||||| ||||| || |  |||||||||||||||||||||||    
T  9452596 ttggattgacttattttgagcttatgtgaacttatctattctcataagcctttttaaaggtgttt 9452660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 542 - 606
Target Start/End: Complemental strand, 12097780 - 12097716
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    |||||||||||||  |||||| ||| ||||||||| ||||  |||||||||||||||||||||||    
T  12097780 ttggattggcttaagttgagcttatatgagcttatctactctcataagcctttttaaaggtgttt 12097716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 542 - 606
Target Start/End: Original strand, 15655918 - 15655982
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||| |||||| |||||| | ||  ||||||||||||| |||||||||    
T  15655918 ttggattggcttattttgagcttatgtgggcttatctgctcgcataagcctttttgaaggtgttt 15655982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 546 - 606
Target Start/End: Original strand, 19828280 - 19828340
Alignment:
Q  546 attggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||  |||||  |||||| |||| ||||||||||||||||||||||||    
T  19828280 attggcttattttgagtttatgttggcttatctactcccataagcctttttaaaggtgttt 19828340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 542 - 606
Target Start/End: Complemental strand, 24792522 - 24792458
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    |||||||||||||  |||||| ||| || |||||| |||| ||||||||||||||||||||||||    
T  24792522 ttggattggcttaagttgagcttatctgggcttatctactcccataagcctttttaaaggtgttt 24792458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 542 - 606
Target Start/End: Original strand, 37704986 - 37705050
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    |||| ||| |||||||||||| |||||| |||||| ||||  |||||||||||||||||||||||    
T  37704986 ttgggttgacttattttgagcttatgtgggcttatctactctcataagcctttttaaaggtgttt 37705050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 542 - 606
Target Start/End: Original strand, 42673471 - 42673535
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    |||||||| ||||||| |||| |||||| |||||| ||||  |||||||||||||||||||||||    
T  42673471 ttggattgacttatttggagcttatgtgggcttatctactcgcataagcctttttaaaggtgttt 42673535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 542 - 606
Target Start/End: Original strand, 42204160 - 42204225
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataag-cctttttaaaggtgttt 606  Q
    ||||||||||||||||||||| |||||| |||||| ||||  |||||| | |||||||||||||||    
T  42204160 ttggattggcttattttgagcttatgtgggcttatctactctcataagtcttttttaaaggtgttt 42204225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 542 - 606
Target Start/End: Original strand, 4347279 - 4347343
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    |||||||| |||||||| ||| |||||| |||||| |||| |||||| | |||||||||||||||    
T  4347279 ttggattgacttattttaagcttatgtgggcttatctactcccataaacttttttaaaggtgttt 4347343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 542 - 606
Target Start/End: Complemental strand, 37006001 - 37005937
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||| ||| |||||||| |||| |||||| |||||  |||||||||| ||||    
T  37006001 ttggattggcttattttaagcttatgtgagtttatctacttctataagtttttttaaaggcgttt 37005937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 534 - 606
Target Start/End: Original strand, 25748484 - 25748557
Alignment:
Q  534 tggccccgtt-ggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    |||||||||| |||||||||||  |||||| ||| | || |||| |||| ||||||| ||||||||||||||||    
T  25748484 tggccccgtttggattggcttaagttgagcttatattagtttatctactcccataagtctttttaaaggtgttt 25748557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 542 - 606
Target Start/End: Complemental strand, 36891019 - 36890956
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    |||||||| ||||||| |||| |||||  |||||| |||| |||||||| |||||||||||||||    
T  36891019 ttggattgacttattt-gagcttatgtaggcttatctactcccataagcttttttaaaggtgttt 36890956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 542 - 606
Target Start/End: Complemental strand, 43021766 - 43021702
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||| ||  ||||||  ||||| |||||| ||||| |||||||||| |||||    
T  43021766 ttggattggcttattttaagtttatgtggacttatctacttcaataagtctttttaaagatgttt 43021702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 542 - 606
Target Start/End: Complemental strand, 46134494 - 46134430
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    |||||||| |||||||||||| |||||||| |||| |||| | ||||  |||||||||| |||||    
T  46134494 ttggattgacttattttgagcttatgtgagtttatctactcctataactctttttaaagatgttt 46134430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 51; Significance: 6e-20; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 533 - 606
Target Start/End: Complemental strand, 19913828 - 19913754
Alignment:
Q  533 atggccccgtt-ggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||| ||||||||||||||||||| |||||| |||||| |||| ||||||||||||||||||||||||    
T  19913828 atggccccgtttggattggcttattttgagcttatgtgggcttatctactcccataagcctttttaaaggtgttt 19913754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 530 - 606
Target Start/End: Original strand, 50353793 - 50353870
Alignment:
Q  530 tatatggccccgtt-ggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    |||| ||||||||| ||||||||||||||||||| | ||||||||||| |||| ||||||||||||||||||||||||    
T  50353793 tataaggccccgtttggattggcttattttgagcttctgtgagcttatctactcccataagcctttttaaaggtgttt 50353870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 542 - 606
Target Start/End: Original strand, 14987797 - 14987861
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||| |||||| ||||||||||| ||||||||| ||||||||||||||    
T  14987797 ttggattggcttattttgagcttatgtgggcttatatactcccataagccattttaaaggtgttt 14987861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 542 - 606
Target Start/End: Original strand, 20877052 - 20877116
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||| |||||| |||||| |||| ||||||||||||||||||||||||    
T  20877052 ttggattggcttattttgagcttatgtgggcttatctactcccataagcctttttaaaggtgttt 20877116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 542 - 606
Target Start/End: Complemental strand, 23776647 - 23776583
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||| |||||| |||||| |||| ||||||||||||||||||||||||    
T  23776647 ttggattggcttattttgagcttatgtgggcttatctactcccataagcctttttaaaggtgttt 23776583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 542 - 606
Target Start/End: Complemental strand, 30423752 - 30423688
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||  |||||| |||||| |||||||||||||||||||||||||||||    
T  30423752 ttggattggcttattttgagtttatgtgggcttatctacttccataagcctttttaaaggtgttt 30423688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 531 - 606
Target Start/End: Original strand, 38055150 - 38055226
Alignment:
Q  531 atatggccccgtt-ggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||| |||||| |||||||||||| |||||| |||||| |||| ||||||||||||||||||||||||    
T  38055150 atatggccccgtttggattgacttattttgagcttatgtgggcttatctactcccataagcctttttaaaggtgttt 38055226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 542 - 606
Target Start/End: Complemental strand, 50055289 - 50055225
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||| |||||| |||||| |||| ||||||||||||||||||||||||    
T  50055289 ttggattggcttattttgagcttatgtgggcttatctactcccataagcctttttaaaggtgttt 50055225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 542 - 606
Target Start/End: Original strand, 54412633 - 54412697
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||| |||||| |||||| |||| ||||||||||||||||||||||||    
T  54412633 ttggattggcttattttgagcttatgtgggcttatctactcccataagcctttttaaaggtgttt 54412697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 542 - 606
Target Start/End: Original strand, 16700786 - 16700850
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||| |||||| |||||| |||| |||||| |||||||||||||||||    
T  16700786 ttggattggcttattttgagcttatgtgggcttatctactcccataaacctttttaaaggtgttt 16700850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 542 - 606
Target Start/End: Original strand, 30171585 - 30171649
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||| ||||||||||||| |  |||||||||| |||||||||||||||    
T  30171585 ttggattggcttattttgagcttatgtgagcttatcttattccataagcttttttaaaggtgttt 30171649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 542 - 606
Target Start/End: Complemental strand, 53717652 - 53717588
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||| |||||||| |||| |||| ||||||||||||||||| ||||||    
T  53717652 ttggattggcttattttgagcttatgtgagtttatctactcccataagcctttttaaatgtgttt 53717588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 542 - 606
Target Start/End: Original strand, 53875662 - 53875726
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||| ||| |||||| |||||||||||  |||||||||||||||||||||||    
T  53875662 ttggattggcttattttaagcttatgtgggcttatatactctcataagcctttttaaaggtgttt 53875726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 542 - 606
Target Start/End: Original strand, 54189550 - 54189614
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||| |||||| |||||| ||||  |||||||||||||||||||||||    
T  54189550 ttggattggcttattttgagcttatgtgggcttatctactaacataagcctttttaaaggtgttt 54189614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 545 - 606
Target Start/End: Complemental strand, 28032897 - 28032836
Alignment:
Q  545 gattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||| |||||||||||| |||||| |||||| |||| ||||||||||||||||||||||||    
T  28032897 gattgacttattttgagcttatgtgggcttatctactcccataagcctttttaaaggtgttt 28032836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 542 - 606
Target Start/End: Original strand, 1617089 - 1617153
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||| ||||||||||||| || |  |||||| ||||||||||||||||    
T  1617089 ttggattggcttattttgagcttatgtgagcttatctattctcataagtctttttaaaggtgttt 1617153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 542 - 606
Target Start/End: Complemental strand, 1756952 - 1756888
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||| ||| || |||||| |||| |||||||| |||||||||||||||    
T  1756952 ttggattggcttattttgagcttatatgggcttatctactcccataagcttttttaaaggtgttt 1756888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 542 - 606
Target Start/End: Complemental strand, 2481596 - 2481532
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||| |||||| |||||| ||||  ||||||||||||| |||||||||    
T  2481596 ttggattggcttattttgagcttatgtgggcttatctactcgcataagcctttttgaaggtgttt 2481532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 542 - 606
Target Start/End: Complemental strand, 6611548 - 6611484
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||| ||||||||||| ||||||  ||||| |||| ||||||||||||||||||||||||    
T  6611548 ttggattggtttattttgagcttatgtggacttatctactcccataagcctttttaaaggtgttt 6611484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 542 - 606
Target Start/End: Complemental strand, 6688809 - 6688745
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    |||||||| |||||||||||  |||||| |||||| |||| ||||||||||||||||||||||||    
T  6688809 ttggattgacttattttgagtttatgtgggcttatctactcccataagcctttttaaaggtgttt 6688745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 542 - 606
Target Start/End: Complemental strand, 8932366 - 8932302
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||| |||| | |||||| |||| | ||||||||||||||||||||||    
T  8932366 ttggattggcttattttgagcttatgcgggcttatctactcctataagcctttttaaaggtgttt 8932302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 542 - 606
Target Start/End: Complemental strand, 15241216 - 15241152
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||| |||||| | |||| |||| | ||||||||||||||||||||||    
T  15241216 ttggattggcttattttgagcttatgtgggtttatctactcctataagcctttttaaaggtgttt 15241152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 542 - 606
Target Start/End: Original strand, 15669188 - 15669252
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||| ||||||||||||| || |  |||||| ||||||||||||||||    
T  15669188 ttggattggcttattttgagcttatgtgagcttatctaatcacataagactttttaaaggtgttt 15669252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 542 - 606
Target Start/End: Complemental strand, 23265945 - 23265881
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||| |||||| |||||| ||||   ||||||||||||||||||||||    
T  23265945 ttggattggcttattttgagcttatgtgggcttatctactcggataagcctttttaaaggtgttt 23265881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 542 - 606
Target Start/End: Complemental strand, 23704397 - 23704333
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||| ||| ||||||||| ||||  |||||||||||| ||||||||||    
T  23704397 ttggattggcttattttgagcttatatgagcttatctactcacataagccttttgaaaggtgttt 23704333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 542 - 606
Target Start/End: Original strand, 28360435 - 28360499
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    |||||||| |||||||||||| |||||| |||| | |||| ||||||||||||||||||||||||    
T  28360435 ttggattgacttattttgagcttatgtgggcttttctactcccataagcctttttaaaggtgttt 28360499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 542 - 606
Target Start/End: Complemental strand, 44785105 - 44785041
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||| |||||| |||||| |||| |||||||||||| |||| ||||||    
T  44785105 ttggattggcttattttgagcttatgtgggcttatctactcccataagcctttgtaaaagtgttt 44785041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 542 - 606
Target Start/End: Original strand, 48909851 - 48909915
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||| |||||| | |||| |||| |||||| |||||||||||||||||    
T  48909851 ttggattggcttattttgagcttatgtgggtttatctactcccataaacctttttaaaggtgttt 48909915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 542 - 606
Target Start/End: Complemental strand, 19165160 - 19165095
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataag-cctttttaaaggtgttt 606  Q
    ||||||||||||||||||||| |||||| |||||| |||| ||||||| | |||||||||||||||    
T  19165160 ttggattggcttattttgagcttatgtgggcttatctactcccataagtcttttttaaaggtgttt 19165095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 542 - 606
Target Start/End: Complemental strand, 27488836 - 27488772
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    |||||||||||||  |||||| ||| || |||||| |||| ||||||||||||||||||||||||    
T  27488836 ttggattggcttaagttgagcttatctgggcttatctactcccataagcctttttaaaggtgttt 27488772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 546 - 606
Target Start/End: Original strand, 37464730 - 37464790
Alignment:
Q  546 attggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||| |||||| |||||| || |  |||||||||||||||||||||||    
T  37464730 attggcttattttgagcttatgtgggcttatctattcgcataagcctttttaaaggtgttt 37464790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 546 - 606
Target Start/End: Complemental strand, 40428904 - 40428844
Alignment:
Q  546 attggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||| |||||| | |||| |||| ||||||||||||||||| ||||||    
T  40428904 attggcttattttgagcttatgtgggtttatctactcccataagcctttttaaaagtgttt 40428844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 542 - 602
Target Start/End: Complemental strand, 40680226 - 40680166
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggt 602  Q
    |||||||| ||||||||||   ||||||||||||| |||||||||||| ||||||||||||    
T  40680226 ttggattgacttattttgaatttatgtgagcttatctacttccataagtctttttaaaggt 40680166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 542 - 606
Target Start/End: Complemental strand, 43290148 - 43290084
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||| | | || |||||| ||||  |||||||||||||||||||||||    
T  43290148 ttggattggcttattttgagcttttatgtgcttatctactcacataagcctttttaaaggtgttt 43290084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 542 - 606
Target Start/End: Original strand, 50053448 - 50053512
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||| ||| ||  ||||| |||| ||||||||||||||||| ||||||    
T  50053448 ttggattggcttattttgagcttatatggacttatctactcccataagcctttttaaatgtgttt 50053512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 545 - 606
Target Start/End: Complemental strand, 37968942 - 37968881
Alignment:
Q  545 gattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    |||||| ||||||||||| |||||| |||||| |||| |||||||  |||||||||||||||    
T  37968942 gattggtttattttgagcttatgtgggcttatctactcccataagtttttttaaaggtgttt 37968881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 542 - 606
Target Start/End: Complemental strand, 11639766 - 11639702
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||| ||||||||| | |||||| |||||| ||||  |||||||||||||||| ||||||    
T  11639766 ttggattggtttattttgaacttatgtgggcttatctactctcataagcctttttaaatgtgttt 11639702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 542 - 606
Target Start/End: Complemental strand, 27583820 - 27583756
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    |||||||| |||||||||||| |||||  |||||| |||| |||||||| ||||||||| |||||    
T  27583820 ttggattgacttattttgagcttatgtaggcttatctactcccataagcttttttaaagatgttt 27583756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 546 - 606
Target Start/End: Original strand, 33703850 - 33703910
Alignment:
Q  546 attggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    |||| |||||||||||| |||||||| |||| ||||   ||||||||||||||||||||||    
T  33703850 attgacttattttgagcttatgtgagtttatctactcggataagcctttttaaaggtgttt 33703910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 542 - 606
Target Start/End: Complemental strand, 35490961 - 35490897
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||| ||| || ||||||  |||  ||||||| |||||||||||||||    
T  35490961 ttggattggcttattttgagcttatatgggcttatccactctcataagcttttttaaaggtgttt 35490897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 546 - 606
Target Start/End: Complemental strand, 38071504 - 38071444
Alignment:
Q  546 attggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    |||| |||||||||||| |||||| |||||| ||||  ||||| |||||||||||||||||    
T  38071504 attgacttattttgagcttatgtgggcttatctactctcataatcctttttaaaggtgttt 38071444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 542 - 606
Target Start/End: Complemental strand, 44379375 - 44379311
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    |||||||| |||||||||||  ||| |  |||||| ||||||||||| |||||||||||||||||    
T  44379375 ttggattgacttattttgagtttatataggcttatctacttccataaacctttttaaaggtgttt 44379311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 542 - 606
Target Start/End: Complemental strand, 45424722 - 45424658
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    |||||||| |||||||||||| |||||  |||||| ||||  ||||||||||||| |||||||||    
T  45424722 ttggattgacttattttgagcttatgttggcttatctactcgcataagcctttttgaaggtgttt 45424658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 542 - 606
Target Start/End: Original strand, 52139208 - 52139272
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||| | |||||| | |||| || ||| ||||| ||||||||||||||||    
T  52139208 ttggattggcttattttgaacttatgtgggtttatctatttctataagtctttttaaaggtgttt 52139272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 547 - 606
Target Start/End: Complemental strand, 8591275 - 8591216
Alignment:
Q  547 ttggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    |||||||||||||||  |||||| | |||| |||||| |||||||||||||||| |||||    
T  8591275 ttggcttattttgagtttatgtgggtttatctacttctataagcctttttaaagatgttt 8591216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 551 - 606
Target Start/End: Complemental strand, 44548320 - 44548265
Alignment:
Q  551 cttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||| |||| |||||| |||||| ||||  |||||||||||||||||||||||    
T  44548320 cttatttggagcttatgtgggcttatctactaacataagcctttttaaaggtgttt 44548265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 552 - 606
Target Start/End: Original strand, 31969696 - 31969750
Alignment:
Q  552 ttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||| ||| || |||||| |||| |||||||||||||||||| |||||    
T  31969696 ttattttgagcttatatgggcttatctactcccataagcctttttaaagatgttt 31969750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 546 - 606
Target Start/End: Complemental strand, 55345009 - 55344949
Alignment:
Q  546 attggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    |||| |||||||||||| |||||| | |||| ||||  ||||||||||||||||| |||||    
T  55345009 attgacttattttgagcttatgtgggtttatctactctcataagcctttttaaagatgttt 55344949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 50; Significance: 2e-19; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 534 - 606
Target Start/End: Complemental strand, 42371004 - 42370931
Alignment:
Q  534 tggccccgtt-ggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    |||||||||| |||||| |||||||||||| ||||||||||||| |||| ||||||||||||||||||||||||    
T  42371004 tggccccgtttggattgacttattttgagcttatgtgagcttatctactcccataagcctttttaaaggtgttt 42370931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 542 - 606
Target Start/End: Complemental strand, 1170644 - 1170580
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||| | |||| |||||| |||||||||||||||||||||||||||||    
T  1170644 ttggattggcttattttgagcttttgtgggcttatctacttccataagcctttttaaaggtgttt 1170580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 542 - 606
Target Start/End: Original strand, 26663263 - 26663327
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||| |||||| |||||| |||| ||||||||||||||||||||||||    
T  26663263 ttggattggcttattttgagcttatgtgggcttatctactcccataagcctttttaaaggtgttt 26663327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 542 - 606
Target Start/End: Original strand, 29078521 - 29078585
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||| |||||| |||||| |||| ||||||||||||||||||||||||    
T  29078521 ttggattggcttattttgagcttatgtgggcttatctactcccataagcctttttaaaggtgttt 29078585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 542 - 606
Target Start/End: Original strand, 38829074 - 38829138
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||| |||||  |||||| |||||||||||||||||||||||||||||    
T  38829074 ttggattggcttattttgagcttatgtcggcttatctacttccataagcctttttaaaggtgttt 38829138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 534 - 606
Target Start/End: Complemental strand, 970735 - 970662
Alignment:
Q  534 tggccccgtt-ggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    |||||||||| |||||| |||||||||||| |||||| |||||| |||| ||||||||||||||||||||||||    
T  970735 tggccccgtttggattgacttattttgagcttatgtgggcttatctactcccataagcctttttaaaggtgttt 970662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 542 - 606
Target Start/End: Original strand, 1168508 - 1168572
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||| |||||| |||||| |||| ||||||| ||||||||||||||||    
T  1168508 ttggattggcttattttgagcttatgtgggcttatctactcccataagtctttttaaaggtgttt 1168572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 542 - 606
Target Start/End: Complemental strand, 1940947 - 1940883
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||| ||| || |||||| |||| ||||||||||||||||||||||||    
T  1940947 ttggattggcttattttgagcttatatgggcttatctactcccataagcctttttaaaggtgttt 1940883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 542 - 606
Target Start/End: Original strand, 5215390 - 5215454
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||| |||||| |||||| ||||| ||||||||||||||||| |||||    
T  5215390 ttggattggcttattttgagcttatgtgggcttatctactttcataagcctttttaaagatgttt 5215454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 542 - 606
Target Start/End: Complemental strand, 8079909 - 8079845
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||| |||||| |||||| ||||  |||||||||||||||||||||||    
T  8079909 ttggattggcttattttgagcttatgtgggcttatctactctcataagcctttttaaaggtgttt 8079845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 542 - 606
Target Start/End: Original strand, 16052101 - 16052165
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||  |||||| |||||| ||||||||||||| |||||||||||||||    
T  16052101 ttggattggcttattttgagtttatgtgggcttatctacttccataagcttttttaaaggtgttt 16052165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 542 - 606
Target Start/End: Complemental strand, 19715361 - 19715297
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||| ||||||||||| ||||||||||||| |||| | ||||||||||||||||||||||    
T  19715361 ttggattggtttattttgagcttatgtgagcttatctactcctataagcctttttaaaggtgttt 19715297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 542 - 606
Target Start/End: Original strand, 20089476 - 20089540
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||| |||||| |||||| |||| |||||||| |||||||||||||||    
T  20089476 ttggattggcttattttgagcttatgtgggcttatctactcccataagcatttttaaaggtgttt 20089540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 542 - 606
Target Start/End: Complemental strand, 26580470 - 26580406
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||| |||||| |||||| || | ||||||||||||||||||||||||    
T  26580470 ttggattggcttattttgagcttatgtgggcttatctattcccataagcctttttaaaggtgttt 26580406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 542 - 606
Target Start/End: Original strand, 29288154 - 29288218
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    |||||||| |||||||||||| |||||| |||||| |||| ||||||||||||||||||||||||    
T  29288154 ttggattgacttattttgagcttatgtgggcttatctactcccataagcctttttaaaggtgttt 29288218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 542 - 606
Target Start/End: Original strand, 33510489 - 33510553
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||| ||| ||||||||| |||| ||||||| ||||||||||||||||    
T  33510489 ttggattggcttattttgagcttatatgagcttatctactcccataagtctttttaaaggtgttt 33510553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 542 - 606
Target Start/End: Complemental strand, 39260546 - 39260482
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||| |||||| |||||| |||| |||||||| |||||||||||||||    
T  39260546 ttggattggcttattttgagcttatgtgggcttatctactcccataagcatttttaaaggtgttt 39260482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 542 - 606
Target Start/End: Complemental strand, 52753347 - 52753283
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||| |||||| |||||| |||| |||||||| |||||||||||||||    
T  52753347 ttggattggcttattttgagcttatgtgggcttatctactcccataagcatttttaaaggtgttt 52753283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 542 - 606
Target Start/End: Original strand, 8120874 - 8120938
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||| ||||||  ||||| ||||  |||||||||||||||||||||||    
T  8120874 ttggattggcttattttgagcttatgtggacttatctactcgcataagcctttttaaaggtgttt 8120938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 542 - 606
Target Start/End: Original strand, 25897379 - 25897443
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    |||||||| |||||||||||| |||||| || ||| |||| ||||||||||||||||||||||||    
T  25897379 ttggattgacttattttgagcttatgtgggcatatctactcccataagcctttttaaaggtgttt 25897443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 542 - 606
Target Start/End: Original strand, 40092496 - 40092560
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    |||||||| |||||||||||| ||| ||||||||| |||| ||||||| ||||||||||||||||    
T  40092496 ttggattgacttattttgagcttatatgagcttatctactcccataagtctttttaaaggtgttt 40092560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 542 - 606
Target Start/End: Original strand, 43905659 - 43905723
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||| ||| || |||||| |||| | ||||||||||||||||||||||    
T  43905659 ttggattggcttattttgagcttatttgggcttatctactcctataagcctttttaaaggtgttt 43905723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 542 - 606
Target Start/End: Original strand, 46760971 - 46761035
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    |||||||| |||||||||| | ||| ||||||||| ||||| |||||||||||||||||||||||    
T  46760971 ttggattgacttattttgaacttatatgagcttatctacttgcataagcctttttaaaggtgttt 46761035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 542 - 606
Target Start/End: Original strand, 52696796 - 52696860
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||| |||||| |||||| ||||  ||||||||||||| |||||||||    
T  52696796 ttggattggcttattttgagcttatgtgggcttatctactcgcataagcctttttgaaggtgttt 52696860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 534 - 602
Target Start/End: Complemental strand, 51359425 - 51359356
Alignment:
Q  534 tggccccgtt-ggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggt 602  Q
    |||||||||| ||||||||||||||||||| |||| | |||||| |||| ||||||||||| ||||||||    
T  51359425 tggccccgtttggattggcttattttgagcttatgcgggcttatttactgccataagccttcttaaaggt 51359356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 542 - 606
Target Start/End: Original strand, 12682825 - 12682889
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    |||||||| |||||||||||  |||||| |||||| |||| ||||||| ||||||||||||||||    
T  12682825 ttggattgacttattttgagtttatgtgggcttatctactcccataagtctttttaaaggtgttt 12682889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 542 - 606
Target Start/End: Complemental strand, 15554344 - 15554280
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    |||||||||||||  |||||| ||| || |||||| |||| ||||||||||||||||||||||||    
T  15554344 ttggattggcttaagttgagcttatatgggcttatctactcccataagcctttttaaaggtgttt 15554280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 546 - 606
Target Start/End: Original strand, 23498469 - 23498529
Alignment:
Q  546 attggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||| ||| |||||| |||||| |||||||| |||||||||| |||||||||    
T  23498469 attggcttattttaagcttatgtgggcttatctacttccacaagcctttttcaaggtgttt 23498529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 542 - 606
Target Start/End: Original strand, 32671584 - 32671648
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||| ||||||   |||| |||| |||||||||||||||||| |||||    
T  32671584 ttggattggcttattttgagcttatgtggatttatctactcccataagcctttttaaagatgttt 32671648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 542 - 606
Target Start/End: Complemental strand, 41928695 - 41928631
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||| | ||||||  ||||| |||| | ||||||||||||||||||||||    
T  41928695 ttggattggcttattttgaacttatgtggacttatctactcctataagcctttttaaaggtgttt 41928631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 553 - 606
Target Start/End: Complemental strand, 17587694 - 17587641
Alignment:
Q  553 tattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    |||||||||| ||||||||||||| || |  |||||||||||||||||||||||    
T  17587694 tattttgagcttatgtgagcttatctattcgcataagcctttttaaaggtgttt 17587641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 542 - 606
Target Start/End: Original strand, 2347661 - 2347725
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||| | ||||||||||  |||| | |||||| |||| ||||||||||||||||||||||||    
T  2347661 ttggatttgtttattttgagtttatgcgggcttatctactcccataagcctttttaaaggtgttt 2347725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 542 - 606
Target Start/End: Original strand, 2473727 - 2473791
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    |||||| || ||||||||||| |||||| |||||| |||  |||||||| |||||||||||||||    
T  2473727 ttggatcggtttattttgagcttatgtgggcttatctacgcccataagcttttttaaaggtgttt 2473791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 542 - 606
Target Start/End: Original strand, 6765464 - 6765528
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||  |||||||  |||| |||||  ||||||||||||||| ||||||    
T  6765464 ttggattggcttattttgagtttatgtgaatttatctacttttataagcctttttaaaagtgttt 6765528  T

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Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 542 - 606
Target Start/End: Complemental strand, 13996923 - 13996859
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    |||||||||||||||||||   |||||| | |||| |||| |||||||||||||||||| |||||    
T  13996923 ttggattggcttattttgaaattatgtgggtttatctactcccataagcctttttaaagatgttt 13996859  T

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Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 542 - 606
Target Start/End: Original strand, 46409440 - 46409504
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    |||||||| |||||||||||| ||||||  ||||| || |  |||||||||||||||||||||||    
T  46409440 ttggattgacttattttgagcttatgtggacttatctaatctcataagcctttttaaaggtgttt 46409504  T

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Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 542 - 606
Target Start/End: Original strand, 49146177 - 49146241
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||| ||||||||||| ||||||   ||||||||| |||||||  |||||||||||||||    
T  49146177 ttggattggtttattttgagcttatgtggatttatatactcccataagtttttttaaaggtgttt 49146241  T

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Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 532 - 605
Target Start/End: Original strand, 15203106 - 15203180
Alignment:
Q  532 tatggccccgttgga-ttggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgtt 605  Q
    |||||||||||| || ||| |||||||| ||| | |||| | |||| |||| |||||||||||||||||||||||    
T  15203106 tatggccccgtttgaattgacttattttaagcttttgtgggtttatctactcccataagcctttttaaaggtgtt 15203180  T

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Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 542 - 606
Target Start/End: Original strand, 17591696 - 17591757
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    |||||||||||||||  |||| |||||| |||||| |||| ||||||||||||| ||||||||||    
T  17591696 ttggattggcttatt--gagcttatgtg-gcttatctactcccataagccttttcaaaggtgttt 17591757  T

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Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 542 - 606
Target Start/End: Original strand, 5675110 - 5675174
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||| ||| ||||| ||||||| ||||  ||||||| |||| |||| |||||    
T  5675110 ttggattggcttattttaagcttatgttagcttatctactaacataagctttttgaaagatgttt 5675174  T

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Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 542 - 606
Target Start/End: Original strand, 15717790 - 15717854
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    |||||||| |||||||||||  |||||  || ||| || || |||||||||||||||||||||||    
T  15717790 ttggattgacttattttgagtttatgttggcctatctaatttcataagcctttttaaaggtgttt 15717854  T

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Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 542 - 606
Target Start/End: Original strand, 52086272 - 52086336
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    |||||||| |||||||| ||| |||||| | |||| | || |||||| |||||||||||||||||    
T  52086272 ttggattgacttattttaagcttatgtgggtttatctgctcccataaacctttttaaaggtgttt 52086336  T

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Target: scaffold0012 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 542 - 606
Target Start/End: Original strand, 36710 - 36774
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||| |||||| |||||| |||| |||||||| |||||||||||||||    
T  36710 ttggattggcttattttgagcttatgtgggcttatctactcccataagcatttttaaaggtgttt 36774  T

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Target: scaffold0482 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0482
Description:

Target: scaffold0482; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 542 - 606
Target Start/End: Complemental strand, 495 - 431
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||  |||||||| |||| |||| ||||||| ||||||||||||||||    
T  495 ttggattggcttattttgagtttatgtgagtttatctactcccataagtctttttaaaggtgttt 431  T

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Target: scaffold0167 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 542 - 606
Target Start/End: Complemental strand, 23151 - 23087
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||||||||||||||| ||| || |||||| ||||  |||||||||||||||||||||||    
T  23151 ttggattggcttattttgagcttatatgggcttatctactctcataagcctttttaaaggtgttt 23087  T

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Target: scaffold0920 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0920
Description:

Target: scaffold0920; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 542 - 606
Target Start/End: Original strand, 3715 - 3779
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    ||||||||| ||||||||| | |||||| |||||| ||||  |||||||||||||||| ||||||    
T  3715 ttggattggtttattttgaacttatgtgggcttatctactctcataagcctttttaaatgtgttt 3779  T

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Target: scaffold0018 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 542 - 606
Target Start/End: Complemental strand, 145445 - 145381
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    |||||||| |||||||||||  ||||||  ||||| |||| |||||||| |||||||||||||||    
T  145445 ttggattgacttattttgagtttatgtggacttatctactcccataagcttttttaaaggtgttt 145381  T

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Target: scaffold1777 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold1777
Description:

Target: scaffold1777; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 546 - 606
Target Start/End: Complemental strand, 202 - 142
Alignment:
Q  546 attggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    |||||||||  |||||  ||| || |||||| |||| ||||||||||||||||||||||||    
T  202 attggcttaagttgagtttatatgggcttatctactcccataagcctttttaaaggtgttt 142  T

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Target: scaffold0172 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 542 - 606
Target Start/End: Original strand, 10243 - 10307
Alignment:
Q  542 ttggattggcttattttgagcatatgtgagcttatatacttccataagcctttttaaaggtgttt 606  Q
    |||||||| |||||||||||| ||| || | |||| ||||  |||||||||| ||||||||||||    
T  10243 ttggattgacttattttgagcttatatgggtttatctactctcataagccttcttaaaggtgttt 10307  T

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