View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11714_low_57 (Length: 206)
Name: NF11714_low_57
Description: NF11714
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11714_low_57 |
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Alignment Details
Target: chr8 (Bit Score: 52; Significance: 5e-21; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 104 - 184
Target Start/End: Original strand, 43423750 - 43423829
Alignment:
| Q |
104 |
ctccatgattattattaactcaaattctatcnnnnnnnnttatagaaccaagcaacaatagtgttccttccccctatagct |
184 |
Q |
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| T |
43423750 |
ctccatgattattattaactcaaattctatcaaaaaaa-ttatagaaccaagcaacaatagtgttccttccccctatagct |
43423829 |
T |
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