View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11717_low_1 (Length: 997)

Name: NF11717_low_1
Description: NF11717
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11717_low_1
NF11717_low_1
[»] chr3 (69 HSPs)
chr3 (144-580)||(10658193-10658625)
chr3 (459-758)||(10594583-10594882)
chr3 (238-576)||(10513675-10514007)
chr3 (238-584)||(10510481-10510814)
chr3 (625-758)||(10513538-10513668)
chr3 (3-98)||(10658626-10658721)
chr3 (648-758)||(10510371-10510478)
chr3 (3-75)||(10514059-10514131)
chr3 (793-938)||(19625070-19625216)
chr3 (72-208)||(10377540-10377678)
chr3 (794-938)||(9491113-9491257)
chr3 (781-834)||(19646203-19646256)
chr3 (606-653)||(35492804-35492851)
chr3 (863-933)||(1661687-1661757)
chr3 (595-653)||(53681869-53681927)
chr3 (604-653)||(52119387-52119436)
chr3 (648-709)||(10658128-10658186)
chr3 (603-653)||(5702178-5702227)
chr3 (79-153)||(10440870-10440944)
chr3 (604-653)||(30200837-30200886)
chr3 (604-653)||(41990585-41990634)
chr3 (604-653)||(54230100-54230149)
chr3 (609-653)||(10926480-10926524)
chr3 (605-653)||(19939043-19939091)
chr3 (795-835)||(26832314-26832354)
chr3 (593-653)||(28148458-28148518)
chr3 (609-649)||(43630424-43630464)
chr3 (617-653)||(45254242-45254278)
chr3 (609-653)||(47377355-47377399)
chr3 (605-653)||(48688126-48688173)
chr3 (606-653)||(5117219-5117266)
chr3 (381-500)||(6113401-6113520)
chr3 (381-500)||(6120293-6120412)
chr3 (606-653)||(7868733-7868779)
chr3 (618-653)||(13800678-13800713)
chr3 (594-653)||(14741805-14741864)
chr3 (606-653)||(22486694-22486741)
chr3 (615-650)||(36690026-36690061)
chr3 (606-653)||(38869521-38869568)
chr3 (606-653)||(39869810-39869857)
chr3 (620-655)||(42943309-42943344)
chr3 (606-653)||(53633620-53633667)
chr3 (605-655)||(1743992-1744042)
chr3 (621-655)||(5135090-5135124)
chr3 (604-638)||(7859493-7859527)
chr3 (615-649)||(26973376-26973410)
chr3 (608-654)||(28266726-28266772)
chr3 (609-655)||(28430571-28430617)
chr3 (604-642)||(28965778-28965816)
chr3 (595-653)||(35191809-35191867)
chr3 (603-653)||(38559896-38559946)
chr3 (607-653)||(39100420-39100466)
chr3 (593-651)||(40359795-40359853)
chr3 (613-651)||(41258984-41259022)
chr3 (275-359)||(797462-797547)
chr3 (604-653)||(2563940-2563989)
chr3 (602-655)||(4033429-4033482)
chr3 (604-653)||(7464492-7464541)
chr3 (275-351)||(9507555-9507632)
chr3 (275-351)||(9515530-9515607)
chr3 (91-128)||(10514019-10514056)
chr3 (609-653)||(12043102-12043147)
chr3 (616-653)||(16980367-16980404)
chr3 (618-651)||(21245806-21245839)
chr3 (604-653)||(21914072-21914121)
chr3 (604-653)||(23653223-23653272)
chr3 (604-653)||(28244105-28244154)
chr3 (604-653)||(41291735-41291784)
chr3 (609-654)||(47040900-47040945)
[»] chr4 (57 HSPs)
chr4 (755-938)||(7108988-7109171)
chr4 (757-938)||(7103675-7103856)
chr4 (70-208)||(25793976-25794114)
chr4 (781-934)||(40756617-40756770)
chr4 (759-937)||(2058964-2059142)
chr4 (796-932)||(11423001-11423137)
chr4 (781-829)||(28033549-28033597)
chr4 (605-653)||(36071155-36071203)
chr4 (863-938)||(9742168-9742243)
chr4 (863-938)||(9745695-9745770)
chr4 (863-938)||(9747861-9747936)
chr4 (604-650)||(36479005-36479051)
chr4 (604-653)||(19908703-19908752)
chr4 (593-645)||(29568605-29568657)
chr4 (593-653)||(34595926-34595986)
chr4 (602-653)||(7190447-7190498)
chr4 (604-655)||(50668349-50668400)
chr4 (593-647)||(1657020-1657074)
chr4 (605-655)||(51465346-51465396)
chr4 (593-638)||(1701635-1701680)
chr4 (604-653)||(3936638-3936687)
chr4 (604-653)||(34960158-34960207)
chr4 (618-655)||(50380851-50380888)
chr4 (604-653)||(56551593-56551642)
chr4 (603-655)||(684994-685046)
chr4 (609-653)||(22411775-22411819)
chr4 (609-653)||(23160051-23160095)
chr4 (593-653)||(29808258-29808318)
chr4 (609-653)||(39842018-39842062)
chr4 (593-653)||(43722776-43722836)
chr4 (609-653)||(46434766-46434810)
chr4 (593-653)||(46676488-46676548)
chr4 (604-652)||(49473657-49473705)
chr4 (609-653)||(56096215-56096259)
chr4 (606-653)||(17656797-17656843)
chr4 (604-647)||(32923204-32923247)
chr4 (618-653)||(32923245-32923280)
chr4 (603-638)||(34968009-34968044)
chr4 (604-655)||(44221456-44221507)
chr4 (606-649)||(45029608-45029651)
chr4 (610-653)||(47704593-47704636)
chr4 (603-653)||(7230291-7230341)
chr4 (593-631)||(32200791-32200829)
chr4 (603-653)||(48223578-48223628)
chr4 (620-654)||(50937565-50937599)
chr4 (604-653)||(3299095-3299144)
chr4 (604-653)||(12058330-12058379)
chr4 (620-653)||(18004476-18004509)
chr4 (618-651)||(22164284-22164317)
chr4 (593-646)||(25978335-25978388)
chr4 (593-638)||(26315789-26315834)
chr4 (604-653)||(28435249-28435298)
chr4 (604-653)||(40070969-40071018)
chr4 (596-653)||(42756099-42756156)
chr4 (858-935)||(44527279-44527355)
chr4 (624-653)||(44689503-44689532)
chr4 (604-653)||(51436607-51436656)
[»] chr7 (40 HSPs)
chr7 (759-938)||(11790744-11790923)
chr7 (781-938)||(14069160-14069317)
chr7 (781-938)||(14379188-14379345)
chr7 (771-936)||(9112048-9112213)
chr7 (755-938)||(25616562-25616744)
chr7 (603-653)||(38553829-38553879)
chr7 (604-653)||(10236906-10236955)
chr7 (604-654)||(7908603-7908653)
chr7 (603-653)||(29237557-29237607)
chr7 (603-653)||(32513169-32513219)
chr7 (604-653)||(34722021-34722071)
chr7 (604-653)||(9522923-9522972)
chr7 (604-653)||(21105614-21105663)
chr7 (604-653)||(27833402-27833451)
chr7 (609-646)||(42227811-42227848)
chr7 (604-653)||(46987097-46987146)
chr7 (593-653)||(2618690-2618750)
chr7 (605-653)||(39049684-39049732)
chr7 (609-653)||(39280824-39280868)
chr7 (618-653)||(15015252-15015287)
chr7 (618-653)||(22327689-22327724)
chr7 (594-653)||(27270246-27270305)
chr7 (604-651)||(41619396-41619443)
chr7 (615-653)||(3536266-3536304)
chr7 (617-655)||(23374644-23374682)
chr7 (603-653)||(24225981-24226031)
chr7 (603-653)||(27158887-27158937)
chr7 (620-654)||(31885962-31885996)
chr7 (604-653)||(2391018-2391067)
chr7 (615-648)||(2756256-2756289)
chr7 (625-654)||(4335966-4335995)
chr7 (624-653)||(4398337-4398366)
chr7 (604-653)||(7872749-7872798)
chr7 (604-653)||(18714459-18714508)
chr7 (604-653)||(22690037-22690086)
chr7 (604-641)||(24099236-24099273)
chr7 (604-653)||(27263352-27263401)
chr7 (605-654)||(38139568-38139617)
chr7 (593-653)||(40890233-40890295)
chr7 (604-653)||(43539105-43539154)
[»] chr8 (48 HSPs)
chr8 (781-938)||(19237434-19237591)
chr8 (781-938)||(19310618-19310775)
chr8 (781-938)||(8969962-8970119)
chr8 (781-938)||(16435933-16436090)
chr8 (755-935)||(9492767-9492947)
chr8 (593-653)||(36919322-36919382)
chr8 (593-653)||(9070969-9071029)
chr8 (593-644)||(3102328-3102379)
chr8 (594-651)||(13477913-13477970)
chr8 (604-653)||(44019560-44019609)
chr8 (609-653)||(1230667-1230711)
chr8 (593-653)||(19778076-19778136)
chr8 (593-653)||(32878672-32878732)
chr8 (593-653)||(33445581-33445641)
chr8 (606-645)||(44146742-44146781)
chr8 (603-649)||(8078100-8078146)
chr8 (603-653)||(42208469-42208519)
chr8 (604-653)||(9655998-9656047)
chr8 (606-654)||(4830018-4830066)
chr8 (606-653)||(10320507-10320554)
chr8 (606-653)||(21557444-21557491)
chr8 (604-651)||(32192907-32192954)
chr8 (755-834)||(38311879-38311958)
chr8 (606-653)||(38489205-38489252)
chr8 (606-653)||(39774950-39774997)
chr8 (618-653)||(43073451-43073486)
chr8 (615-653)||(8020321-8020359)
chr8 (603-653)||(8717475-8717525)
chr8 (595-653)||(13105105-13105163)
chr8 (603-653)||(13357441-13357491)
chr8 (258-351)||(22930988-22931082)
chr8 (603-653)||(27750904-27750954)
chr8 (593-651)||(29924907-29924965)
chr8 (603-653)||(35102667-35102717)
chr8 (615-653)||(36588106-36588144)
chr8 (609-655)||(37141366-37141412)
chr8 (604-653)||(3650531-3650580)
chr8 (618-655)||(7968955-7968992)
chr8 (604-649)||(9241030-9241075)
chr8 (604-649)||(10732776-10732821)
chr8 (604-653)||(11104775-11104824)
chr8 (624-653)||(18533680-18533709)
chr8 (604-653)||(20469312-20469361)
chr8 (596-653)||(27129093-27129150)
chr8 (604-653)||(30623304-30623353)
chr8 (596-653)||(31888037-31888094)
chr8 (603-640)||(32115406-32115443)
chr8 (604-653)||(38282840-38282889)
[»] chr5 (48 HSPs)
chr5 (755-934)||(32401868-32402046)
chr5 (782-938)||(27214255-27214411)
chr5 (606-648)||(18981192-18981234)
chr5 (781-838)||(4719225-4719282)
chr5 (593-654)||(21657388-21657449)
chr5 (593-653)||(9123835-9123895)
chr5 (593-653)||(43108580-43108640)
chr5 (596-647)||(2951361-2951411)
chr5 (618-653)||(24438558-24438593)
chr5 (603-653)||(18391611-18391661)
chr5 (604-653)||(5107246-5107295)
chr5 (616-653)||(12909179-12909216)
chr5 (604-649)||(22745904-22745949)
chr5 (604-653)||(26409264-26409313)
chr5 (604-653)||(26655475-26655524)
chr5 (604-653)||(26927060-26927109)
chr5 (609-654)||(27903123-27903168)
chr5 (604-653)||(31602826-31602875)
chr5 (618-655)||(36162904-36162941)
chr5 (604-653)||(39143725-39143774)
chr5 (605-653)||(2705518-2705566)
chr5 (605-649)||(13547462-13547506)
chr5 (606-654)||(16752505-16752553)
chr5 (605-653)||(23118053-23118101)
chr5 (593-653)||(26034598-26034658)
chr5 (615-651)||(27651542-27651578)
chr5 (593-653)||(31708136-31708196)
chr5 (604-653)||(35807742-35807793)
chr5 (606-653)||(11647208-11647255)
chr5 (618-653)||(18278274-18278309)
chr5 (602-653)||(31545882-31545933)
chr5 (606-653)||(34702501-34702548)
chr5 (603-653)||(6894107-6894157)
chr5 (607-653)||(15105114-15105160)
chr5 (606-640)||(42854323-42854357)
chr5 (624-653)||(1669601-1669630)
chr5 (593-654)||(3955556-3955617)
chr5 (604-653)||(11637573-11637622)
chr5 (617-654)||(16193117-16193154)
chr5 (604-653)||(16579375-16579424)
chr5 (605-654)||(25709743-25709792)
chr5 (604-653)||(29695026-29695075)
chr5 (609-653)||(29904431-29904476)
chr5 (604-637)||(37073769-37073802)
chr5 (609-654)||(37791169-37791214)
chr5 (604-653)||(37932341-37932390)
chr5 (624-653)||(39917905-39917934)
chr5 (618-655)||(42515816-42515853)
[»] scaffold0524 (1 HSPs)
scaffold0524 (781-931)||(10023-10173)
[»] chr2 (46 HSPs)
chr2 (789-938)||(17538705-17538854)
chr2 (755-938)||(26024532-26024718)
chr2 (861-938)||(5953598-5953675)
chr2 (593-653)||(37320507-37320567)
chr2 (755-877)||(23496863-23496975)
chr2 (604-653)||(25274830-25274879)
chr2 (593-653)||(12124556-12124616)
chr2 (610-650)||(21497681-21497721)
chr2 (605-653)||(35727448-35727496)
chr2 (615-654)||(2429026-2429065)
chr2 (615-654)||(44488022-44488061)
chr2 (607-653)||(13196711-13196757)
chr2 (604-653)||(8542959-8543008)
chr2 (620-653)||(20517033-20517066)
chr2 (593-654)||(22520227-22520288)
chr2 (604-653)||(24593387-24593436)
chr2 (593-653)||(2687365-2687424)
chr2 (613-653)||(3196571-3196611)
chr2 (605-653)||(4238770-4238818)
chr2 (593-653)||(12124695-12124755)
chr2 (609-653)||(20120727-20120771)
chr2 (609-653)||(25395448-25395492)
chr2 (604-644)||(43356543-43356583)
chr2 (606-653)||(12893247-12893294)
chr2 (606-653)||(16221349-16221396)
chr2 (618-653)||(23250335-23250370)
chr2 (614-653)||(26133531-26133570)
chr2 (614-653)||(33966332-33966371)
chr2 (606-652)||(34843517-34843563)
chr2 (606-653)||(40099387-40099433)
chr2 (593-651)||(10065486-10065544)
chr2 (605-651)||(15612962-15613008)
chr2 (604-654)||(34903527-34903577)
chr2 (604-653)||(35456821-35456871)
chr2 (603-653)||(40967371-40967421)
chr2 (616-653)||(145024-145061)
chr2 (593-638)||(2264823-2264868)
chr2 (618-651)||(6579296-6579329)
chr2 (604-653)||(6765621-6765670)
chr2 (620-653)||(20644015-20644048)
chr2 (604-653)||(24393256-24393305)
chr2 (604-641)||(24581018-24581055)
chr2 (604-653)||(27935067-27935116)
chr2 (604-653)||(28771593-28771642)
chr2 (617-650)||(32957557-32957590)
chr2 (604-653)||(43117191-43117240)
[»] chr1 (52 HSPs)
chr1 (604-653)||(21015973-21016022)
chr1 (606-654)||(9413808-9413856)
chr1 (593-653)||(30795712-30795772)
chr1 (755-883)||(43542131-43542259)
chr1 (593-653)||(27023646-27023705)
chr1 (604-651)||(17221521-17221568)
chr1 (604-653)||(34083348-34083397)
chr1 (593-653)||(10132434-10132494)
chr1 (618-654)||(25271778-25271814)
chr1 (781-913)||(31438456-31438587)
chr1 (601-653)||(35442866-35442918)
chr1 (607-654)||(32826709-32826756)
chr1 (606-653)||(34808566-34808613)
chr1 (604-653)||(2613733-2613782)
chr1 (604-653)||(9398414-9398463)
chr1 (604-653)||(33153881-33153930)
chr1 (597-638)||(45652113-45652154)
chr1 (604-653)||(47528448-47528497)
chr1 (609-653)||(2817379-2817423)
chr1 (617-653)||(3573338-3573374)
chr1 (594-654)||(7652111-7652171)
chr1 (593-653)||(17283962-17284022)
chr1 (615-651)||(22821069-22821105)
chr1 (593-653)||(37045136-37045196)
chr1 (606-653)||(1408446-1408493)
chr1 (610-653)||(24124837-24124880)
chr1 (605-652)||(25942654-25942701)
chr1 (604-651)||(30561736-30561783)
chr1 (606-653)||(32874392-32874439)
chr1 (606-653)||(38448869-38448916)
chr1 (618-653)||(41926833-41926868)
chr1 (615-646)||(42860125-42860156)
chr1 (618-653)||(44243884-44243919)
chr1 (606-652)||(12500935-12500981)
chr1 (760-830)||(15262439-15262509)
chr1 (605-655)||(45481502-45481552)
chr1 (615-653)||(48681945-48681983)
chr1 (615-653)||(50849085-50849123)
chr1 (604-653)||(6000144-6000193)
chr1 (623-652)||(6519900-6519929)
chr1 (604-653)||(9872106-9872155)
chr1 (604-653)||(12268985-12269034)
chr1 (604-653)||(13615613-13615662)
chr1 (604-653)||(18056717-18056766)
chr1 (618-651)||(22946565-22946598)
chr1 (624-653)||(25365017-25365046)
chr1 (604-653)||(26329123-26329172)
chr1 (604-653)||(27533254-27533303)
chr1 (604-653)||(28039861-28039910)
chr1 (616-653)||(30678826-30678863)
chr1 (614-651)||(43843904-43843941)
chr1 (593-654)||(45190259-45190320)
[»] chr6 (37 HSPs)
chr6 (604-654)||(15062301-15062351)
chr6 (609-650)||(2105919-2105960)
chr6 (609-653)||(32193865-32193909)
chr6 (593-651)||(404176-404234)
chr6 (604-654)||(9111057-9111107)
chr6 (604-653)||(15169942-15169991)
chr6 (604-653)||(15178714-15178763)
chr6 (604-653)||(31971540-31971589)
chr6 (605-653)||(6196533-6196581)
chr6 (593-653)||(9333970-9334030)
chr6 (593-653)||(10118928-10118988)
chr6 (609-653)||(24438288-24438332)
chr6 (609-640)||(4826314-4826345)
chr6 (618-653)||(8138473-8138508)
chr6 (606-653)||(10497155-10497202)
chr6 (606-653)||(12276234-12276281)
chr6 (593-653)||(13655172-13655234)
chr6 (606-653)||(26587403-26587450)
chr6 (618-653)||(32149149-32149184)
chr6 (615-653)||(788877-788915)
chr6 (603-653)||(1989043-1989092)
chr6 (604-654)||(8637438-8637488)
chr6 (605-651)||(15291692-15291738)
chr6 (603-653)||(16390440-16390490)
chr6 (603-653)||(19277585-19277635)
chr6 (604-654)||(23507392-23507442)
chr6 (615-653)||(33938691-33938729)
chr6 (604-638)||(35110080-35110114)
chr6 (604-653)||(2726418-2726467)
chr6 (612-653)||(10320440-10320481)
chr6 (616-653)||(12319256-12319293)
chr6 (604-653)||(12329287-12329336)
chr6 (604-653)||(17829309-17829358)
chr6 (604-653)||(24623318-24623367)
chr6 (604-653)||(28758291-28758340)
chr6 (616-653)||(28951410-28951447)
chr6 (609-654)||(34701157-34701202)
[»] scaffold0129 (1 HSPs)
scaffold0129 (793-829)||(44869-44905)
[»] scaffold0238 (1 HSPs)
scaffold0238 (593-653)||(25400-25460)
[»] scaffold0204 (1 HSPs)
scaffold0204 (606-645)||(16170-16209)
[»] scaffold0026 (1 HSPs)
scaffold0026 (606-653)||(75336-75383)
[»] scaffold1120 (1 HSPs)
scaffold1120 (604-650)||(1927-1973)
[»] scaffold0118 (1 HSPs)
scaffold0118 (603-653)||(40009-40059)
[»] scaffold0012 (1 HSPs)
scaffold0012 (612-650)||(119963-120001)
[»] scaffold0006 (1 HSPs)
scaffold0006 (612-650)||(210087-210125)
[»] scaffold1160 (1 HSPs)
scaffold1160 (604-653)||(1713-1762)
[»] scaffold0328 (1 HSPs)
scaffold0328 (604-649)||(3350-3395)
[»] scaffold0083 (1 HSPs)
scaffold0083 (604-653)||(45954-46003)
[»] scaffold0072 (1 HSPs)
scaffold0072 (624-653)||(25706-25735)
[»] scaffold0041 (1 HSPs)
scaffold0041 (593-653)||(75989-76051)
[»] scaffold0016 (1 HSPs)
scaffold0016 (604-653)||(204601-204650)


Alignment Details
Target: chr3 (Bit Score: 250; Significance: 1e-138; HSPs: 69)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 250; E-Value: 1e-138
Query Start/End: Original strand, 144 - 580
Target Start/End: Complemental strand, 10658625 - 10658193
Alignment:
Q  144 taagtaaatctaatcctgtggcagtggcaaccattttgctcctctcaaacatttttacaaaaagagaacaaagtgttttgtcnnnnnnnnnn---gggta 240  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||             | |||    
T  10658625 taagtaaatctaatcctgtggcagtgacaaccattttgctcctctcaaacatttttacaaaaagagaacaaagtgttttgtcacaaaaaaaaaaagtgta 10658526  T
Q  241 acaatattacaacataaatataaaattatacgcatagaagtaacaaaactaatttctatattaactattaaagatattatgataagcagtttggttgaaa 340  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||      || ||| ||    
T  10658525 acaatattacaacataaatataaaattatacgcatagaagtaacaaaactaatttatagattaactattaaagatattatgataac-----tgattggaa 10658431  T
Q  341 agaaaatgtgacatgccagcctgaatagaaggctacggcaatatctctaaaataaagagaaaagaagacaatcaaaatagtagtattag-ctaacttatt 439  Q
    ||||||||||| ||| ||||||||||||||||||||| ||| ||||||||  ||||||||||||||||||||||||||| |||||||   ||||||||||    
T  10658430 agaaaatgtgatatgtcagcctgaatagaaggctacgacaa-atctctaa--taaagagaaaagaagacaatcaaaataatagtattttactaacttatt 10658334  T
Q  440 taatttctttaccatcatcttaaattacaaagcaataactataagaattttgaaattagaaaaataagacaacaacgtaactaaaaagcaactaatttaa 539  Q
    | |||||||||||||||||||| |||||||||||||||||| ||||||||| ||||||||||||||||||||||| |||| |||||||||||||||| ||    
T  10658333 tcatttctttaccatcatcttagattacaaagcaataactacaagaattttaaaattagaaaaataagacaacaaagtaattaaaaagcaactaattgaa 10658234  T
Q  540 tattttaaactaaatacagaatcatgatagtacataatctt 580  Q
    |||| || ||||||| |||||||||||||| ||| ||||||    
T  10658233 tattgtacactaaatgcagaatcatgatagcacaaaatctt 10658193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 459 - 758
Target Start/End: Complemental strand, 10594882 - 10594583
Alignment:
Q  459 ttaaattacaaagcaataactataagaattttgaaattagaaaaataagacaacaacgtaactaaaaagcaactaatttaatattttaaactaaatacag 558  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||||  ||    
T  10594882 ttaaattacaaagcaataactataagaattttgaaattagaaaaataagacaacaaagtaactaaaaagcaactaattcaatattttaaagtaaatgtag 10594783  T
Q  559 aatcatgatagtacataatcttttagnnnnnnnngtggtgtctaaggttcgaacctcgaaccttacatatattatgcattgttcttaccaactgaatggt 658  Q
    ||||||||||||||||||||||||||         ||||||| |||||| |||||   |||||| ||||||||||||||||| |||||||||||||||||    
T  10594782 aatcatgatagtacataatcttttagttttttttttggtgtccaaggtttgaaccctaaaccttgcatatattatgcattgtccttaccaactgaatggt 10594683  T
Q  659 taacatatacaaatggtgaacctactacacttcggtatcacaccaagggtacacatatctggtggacaatgagcatcattaaaacatctacgaatctctg 758  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10594682 taacatatacaaatggtgaacctactacacttcggtatcacaccaagggtacacatatctggtggacaatgagcatcattaaaacatctacgaatctctg 10594583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 220; E-Value: 1e-120
Query Start/End: Original strand, 238 - 576
Target Start/End: Complemental strand, 10514007 - 10513675
Alignment:
Q  238 gtaacaatattacaacataaatataaaattatacgcatagaagtaacaaaactaatttctatattaactattaaagatattatgataagcagtttggttg 337  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||      || |||    
T  10514007 gtaacaatattacaacataaatataaaattatacgcatagaagtaacaaaactaatttctagattaactattaaagatattatgataac-----tgattg 10513913  T
Q  338 aaaagaaaatgtgacatgccagcctgaatagaaggctacggcaatatctctaaaataaagagaaaagaagacaatcaaaatagtagtattag-ctaactt 436  Q
     ||||||||||||| || | |||||||||||||||||||  |||| |||||||||||||||||||| ||||||||||||||| |||||||   |||||||    
T  10513912 gaaagaaaatgtgatattc-agcctgaatagaaggctacaacaatctctctaaaataaagagaaaataagacaatcaaaataatagtattttactaactt 10513814  T
Q  437 atttaatttctttaccatcatcttaaattacaaagcaataactataagaattttgaaattagaaaaataagacaacaacgtaactaaaaagcaactaatt 536  Q
    |||| ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  10513813 atttcatttctttaccatcatcctaaattaaaaagcaataactataagaattttgaaattagaaaaataagacaacaa-gtaactaaaaagcaactaatt 10513715  T
Q  537 taatattttaaactaaatacagaatcatgatagtacataa 576  Q
    ||||||||||||||||||  ||||||||||||||| ||||    
T  10513714 taatattttaaactaaatgtagaatcatgatagtagataa 10513675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 238 - 584
Target Start/End: Complemental strand, 10510814 - 10510481
Alignment:
Q  238 gtaacaatattacaacataaatataaaattatacgcatagaagtaacaaaactaatttctatattaactattaaagatattatgataagcagtttggttg 337  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| ||||||    
T  10510814 gtaacaatattacaacataaatataaaattatacgcatagaagtaacaaaactaatttctagcttaactattaaagatattatgataagcagtatggttg 10510715  T
Q  338 aaaagaaaatgtgacatgccagcctgaatagaaggctacggcaatatctctaaaataaagagaaaagaagacaatcaaaatagtagta-ttagctaactt 436  Q
     ||||||||||||| ||| ||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||| ||  |||||||    
T  10510714 gaaagaaaatgtgatatgtcagcctgaatagaaggctacgacaatatctctaaaataaagagaaacgaagacaatcaaaatagtagtattttactaactt 10510615  T
Q  437 atttaatttctttaccatcatcttaaattacaaagcaataactataagaattttgaaattagaaaaataagacaacaacgtaactaaaaagcaactaatt 536  Q
    |||| |||||||||||||||||||  |||||              ||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||    
T  10510614 atttcatttctttaccatcatctttgattac--------------aaggattttgaaattagaaaaataagataacaaagtaactaaaaagcaactaatt 10510529  T
Q  537 taatattttaaactaaatacagaatcatgatagtacataatcttttag 584  Q
     |||||| || ||||||| |||||||||||||||||||||||||||||    
T  10510528 gaatattgtacactaaatgcagaatcatgatagtacataatcttttag 10510481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 108; E-Value: 1e-53
Query Start/End: Original strand, 625 - 758
Target Start/End: Complemental strand, 10513668 - 10513538
Alignment:
Q  625 atatattatgcattgttcttaccaactgaatggttaacatatacaaatggtgaacctactacacttcggtatcacaccaagggtacacatatctggtgga 724  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |   ||||||||||||||||||||||||||||||||||||||    
T  10513668 atatattatgcattgtccttaccaactgaatggttaacatatacaaatggtgaaccttc---acttcggtatcacaccaagggtacacatatctggtgga 10513572  T
Q  725 caatgagcatcattaaaacatctacgaatctctg 758  Q
    ||||||||||||||||||||| ||||||||||||    
T  10513571 caatgagcatcattaaaacatgtacgaatctctg 10513538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 92; E-Value: 4e-44
Query Start/End: Original strand, 3 - 98
Target Start/End: Complemental strand, 10658721 - 10658626
Alignment:
Q  3 ttttttaccataagattgttcacaatcacatgcatatgtgaattgagaatattattatcatgatttcattctactcttgcttatgcagattatgaa 98  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  10658721 ttttttaccataagattgttcacaatcacatgcatatgtgaattgagaatattattatcacgatttcattctactcttgcttatgcagattatgaa 10658626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 648 - 758
Target Start/End: Complemental strand, 10510478 - 10510371
Alignment:
Q  648 aactgaatggttaacatatacaaatggtgaacctactacacttcggtatcacaccaagggtacacatatctggtggacaatgagcatcattaaaacatct 747  Q
    |||| |||||||||||| |||||||||||||| |||   ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  10510478 aactcaatggttaacatttacaaatggtgaacttac---acttcggtatcacaccaggggtacacatatctggtggacaatgagcatcattaaaacatct 10510382  T
Q  748 acgaatctctg 758  Q
    |||||||||||    
T  10510381 acgaatctctg 10510371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 3 - 75
Target Start/End: Complemental strand, 10514131 - 10514059
Alignment:
Q  3 ttttttaccataagattgttcacaatcacatgcatatgtgaattgagaatattattatcatgatttcattcta 75  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  10514131 ttttttaccataagattgttcacaatcacatgcatatgtgaattgagaatattattatcacgatttcattcta 10514059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 793 - 938
Target Start/End: Original strand, 19625070 - 19625216
Alignment:
Q  793 gacaacatcttcattatctctcaccacaacaccaatatcccatttatc-actctctatcgaatctgctacgtcaacattaagcttaaagaaatcactaaa 891  Q
    ||||||| |||||||||||||||||| ||||||||||||||| ||| | || |||||||| | || || | || |||||||| ||| ||||| |||||||    
T  19625070 gacaacaccttcattatctctcaccaaaacaccaatatcccacttacccaccctctatcggaccttctgcatcgacattaagtttacagaaaccactaaa 19625169  T
Q  892 cagaggtgtccaatgaacatcatatattggtaaaattggacctccac 938  Q
     ||||||||||||||||||||| ||||||| ||| || |||||||||    
T  19625170 aagaggtgtccaatgaacatcagatattggcaaacttagacctccac 19625216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 72 - 208
Target Start/End: Original strand, 10377540 - 10377678
Alignment:
Q  72 tctactcttgcttatgcagattatgaaggatataaaaagatg--gagattataagaaaatacaaactgaatagctaagtaaatctaatcctgtggcagtg 169  Q
    |||| |||||||| |||| |||||| |||||||| || ||||  || || ||||||||||||| |||||||| | |||||||||||||||||||||| ||    
T  10377540 tctaatcttgcttgtgcaaattatgtaggatatacaatgatgtcgatatgataagaaaatacagactgaatacccaagtaaatctaatcctgtggcaatg 10377639  T
Q  170 gcaaccattttgctcctctcaaacatttttacaaaaaga 208  Q
     |  || |||||||||||||||| |||||||||| ||||    
T  10377640 acggccgttttgctcctctcaaatatttttacaagaaga 10377678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 794 - 938
Target Start/End: Original strand, 9491113 - 9491257
Alignment:
Q  794 acaacatcttcattatctctcaccacaacaccaatatcccatttatcactctctatcgaatctgctacgtcaacattaagcttaaagaaatcactaaaca 893  Q
    |||||| || ||| |||||||||||||||||||| | |||| ||||| | |||||||| | || || | |||||||||| |||| ||||| || |||| |    
T  9491113 acaacacctacataatctctcaccacaacaccaaaaccccacttatccccctctatcggacctactgcatcaacattaaacttatagaaaccattaaa-a 9491211  T
Q  894 ga-ggtgtccaatgaacatcatatattggtaaaattggacctccac 938  Q
    || |||||||||||||||| | || |||| ||||||||||||||||    
T  9491212 gatggtgtccaatgaacataagatgttggcaaaattggacctccac 9491257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 781 - 834
Target Start/End: Original strand, 19646203 - 19646256
Alignment:
Q  781 actagcaccaacgacaacatcttcattatctctcaccacaacaccaatatccca 834  Q
    ||||||| ||| ||||||| ||||||||||||||||||||||||||||||||||    
T  19646203 actagcagcaatgacaacaccttcattatctctcaccacaacaccaatatccca 19646256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 606 - 653
Target Start/End: Complemental strand, 35492851 - 35492804
Alignment:
Q  606 ttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||||||||||||| || ||||||||||||||||||||||||||||||    
T  35492851 ttcgaacctcgaactttgcatatattatgcattgttcttaccaactga 35492804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 863 - 933
Target Start/End: Original strand, 1661687 - 1661757
Alignment:
Q  863 tcaacattaagcttaaagaaatcactaaacagaggtgtccaatgaacatcatatattggtaaaattggacc 933  Q
    ||||||||||||||| |||||||||||||   |  |||||||||||||||||||||||| |||||| ||||    
T  1661687 tcaacattaagcttatagaaatcactaaaagaatatgtccaatgaacatcatatattggcaaaattagacc 1661757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 595 - 653
Target Start/End: Original strand, 53681869 - 53681927
Alignment:
Q  595 ggtgtctaaggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||||| | |||||||||||| || ||| ||||||||||||||||||||||||||||||    
T  53681869 ggtgtccagggttcgaacctcaaatcttgcatatattatgcattgttcttaccaactga 53681927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 604 - 653
Target Start/End: Complemental strand, 52119436 - 52119387
Alignment:
Q  604 ggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||||||||| |||||||| ||||||||||||||||| ||||||||||||    
T  52119436 ggttcgaaccccgaaccttgcatatattatgcattgtccttaccaactga 52119387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 648 - 709
Target Start/End: Complemental strand, 10658186 - 10658128
Alignment:
Q  648 aactgaatggttaacatatacaaatggtgaacctactacacttcggtatcacaccaagggta 709  Q
    |||| |||||||||||| ||||||||| ||||||||   |||||||||||||||||||||||    
T  10658186 aactcaatggttaacatttacaaatggggaacctac---acttcggtatcacaccaagggta 10658128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 603 - 653
Target Start/End: Original strand, 5702178 - 5702227
Alignment:
Q  603 aggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    ||||||||||||| |||||| |||||||||||||||| |||||||||||||    
T  5702178 aggttcgaacctcaaaccttgcatatattatgcattg-tcttaccaactga 5702227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 79 - 153
Target Start/End: Original strand, 10440870 - 10440944
Alignment:
Q  79 ttgcttatgcagattatgaaggatataaaaagatggagattataagaaaatacaaactgaatagctaagtaaatc 153  Q
    |||||| |||| |||||| |||||||| || ||||  ||| ||||||||||||| |||||||| |||||||||||    
T  10440870 ttgcttgtgcaaattatgtaggatatacaatgatgccgatgataagaaaatacagactgaataactaagtaaatc 10440944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 604 - 653
Target Start/End: Complemental strand, 30200886 - 30200837
Alignment:
Q  604 ggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||||||||||| |||||| ||||||||||||||||| |||| |||||||    
T  30200886 ggttcgaacctcaaaccttgcatatattatgcattgtccttagcaactga 30200837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 604 - 653
Target Start/End: Original strand, 41990585 - 41990634
Alignment:
Q  604 ggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    ||||||||||||| ||||| ||||||||||| ||||||||||| ||||||    
T  41990585 ggttcgaacctcggaccttgcatatattatgtattgttcttacaaactga 41990634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 604 - 653
Target Start/End: Original strand, 54230100 - 54230149
Alignment:
Q  604 ggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||||||||| | |||||| ||||||||||||||||| ||||||||||||    
T  54230100 ggttcgaaccccaaaccttgcatatattatgcattgtccttaccaactga 54230149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 609 - 653
Target Start/End: Complemental strand, 10926524 - 10926480
Alignment:
Q  609 gaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    ||||| |||||||| ||||||||||||||||| ||||||||||||    
T  10926524 gaaccccgaaccttgcatatattatgcattgtccttaccaactga 10926480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 605 - 653
Target Start/End: Original strand, 19939043 - 19939091
Alignment:
Q  605 gttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    ||||||||| |  ||||| ||||||||||||||||||||||||||||||    
T  19939043 gttcgaaccccagacctttcatatattatgcattgttcttaccaactga 19939091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 795 - 835
Target Start/End: Complemental strand, 26832354 - 26832314
Alignment:
Q  795 caacatcttcattatctctcaccacaacaccaatatcccat 835  Q
    ||||||||||| |||||||||| ||||||||||||||||||    
T  26832354 caacatcttcactatctctcacaacaacaccaatatcccat 26832314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 593 - 653
Target Start/End: Original strand, 28148458 - 28148518
Alignment:
Q  593 gtggtgtctaaggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||||||||| |||| |||||| ||||||| ||||| |||| |||| ||||||||||||||    
T  28148458 gtggtgtctagggtttgaaccttgaaccttgcatattttatacattattcttaccaactga 28148518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 609 - 649
Target Start/End: Original strand, 43630424 - 43630464
Alignment:
Q  609 gaacctcgaaccttacatatattatgcattgttcttaccaa 649  Q
    ||||||| |||||||||||||||||||||||||| ||||||    
T  43630424 gaacctcaaaccttacatatattatgcattgttcataccaa 43630464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 617 - 653
Target Start/End: Complemental strand, 45254278 - 45254242
Alignment:
Q  617 aaccttacatatattatgcattgttcttaccaactga 653  Q
    |||||||||||||||||||||||| ||||||||||||    
T  45254278 aaccttacatatattatgcattgtccttaccaactga 45254242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 609 - 653
Target Start/End: Original strand, 47377355 - 47377399
Alignment:
Q  609 gaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    ||||||||||||||  |||||||||||||||| ||||||||||||    
T  47377355 gaacctcgaaccttgtatatattatgcattgtccttaccaactga 47377399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 605 - 653
Target Start/End: Complemental strand, 48688173 - 48688126
Alignment:
Q  605 gttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    ||||||||||| ||||||||||||||||||||||| || ||||||||||    
T  48688173 gttcgaacctcaaaccttacatatattatgcattg-tcataccaactga 48688126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 606 - 653
Target Start/End: Complemental strand, 5117266 - 5117219
Alignment:
Q  606 ttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||||||||| |||||||||||||||||| ||||| |||| |||||||    
T  5117266 ttcgaacctcaaaccttacatatattatgtattgtccttatcaactga 5117219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 381 - 500
Target Start/End: Complemental strand, 6113520 - 6113401
Alignment:
Q  381 atatctctaaaataaagagaaaagaagacaatcaaaatagtagtattagctaacttatttaatttctttaccatcatcttaaattacaaagcaataacta 480  Q
    ||||||||||||| || ||| || |||||||||  |||  || ||||  ||| ||||||| ||||| |||||||||||||| | |||||||| || ||||    
T  6113520 atatctctaaaattaatagacaaaaagacaatcttaatgatattattcactatcttatttgatttcattaccatcatcttagagtacaaagccattacta 6113421  T
Q  481 taagaattttgaaattagaa 500  Q
     |||  | ||||||||||||    
T  6113420 caaggttcttgaaattagaa 6113401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 381 - 500
Target Start/End: Complemental strand, 6120412 - 6120293
Alignment:
Q  381 atatctctaaaataaagagaaaagaagacaatcaaaatagtagtattagctaacttatttaatttctttaccatcatcttaaattacaaagcaataacta 480  Q
    ||||||||||||| |||||| || |||| ||||  |||  || ||||  ||| ||||||| ||||| |||||||||||||| | |||||||| || ||||    
T  6120412 atatctctaaaattaagagacaaaaagataatcttaatgatattattcactatcttatttgatttcattaccatcatcttagagtacaaagccattacta 6120313  T
Q  481 taagaattttgaaattagaa 500  Q
     |||  | ||||||||||||    
T  6120312 caaggttcttgaaattagaa 6120293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 606 - 653
Target Start/End: Complemental strand, 7868779 - 7868733
Alignment:
Q  606 ttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||||||| ||||| || ||||||||||||||||||||||||||||||    
T  7868779 ttcgaacc-cgaactttgcatatattatgcattgttcttaccaactga 7868733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 618 - 653
Target Start/End: Complemental strand, 13800713 - 13800678
Alignment:
Q  618 accttacatatattatgcattgttcttaccaactga 653  Q
    ||||| ||||||||||||||||||||||||||||||    
T  13800713 accttgcatatattatgcattgttcttaccaactga 13800678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 594 - 653
Target Start/End: Complemental strand, 14741864 - 14741805
Alignment:
Q  594 tggtgtctaaggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||||||  ||||||||||  | |||||| ||||||||||||||||| ||||||||||||    
T  14741864 tggtgtccgaggttcgaactccaaaccttgcatatattatgcattgtccttaccaactga 14741805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 606 - 653
Target Start/End: Complemental strand, 22486741 - 22486694
Alignment:
Q  606 ttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||||||| | || ||| ||||||||||||||||||||||||||||||    
T  22486741 ttcgaaccccaaatcttgcatatattatgcattgttcttaccaactga 22486694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 615 - 650
Target Start/End: Complemental strand, 36690061 - 36690026
Alignment:
Q  615 cgaaccttacatatattatgcattgttcttaccaac 650  Q
    |||||||||||||||||||||||||||| |||||||    
T  36690061 cgaaccttacatatattatgcattgttcctaccaac 36690026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 606 - 653
Target Start/End: Original strand, 38869521 - 38869568
Alignment:
Q  606 ttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    ||||||||||| | |||  |||||||||||||||||||||||||||||    
T  38869521 ttcgaacctcggatcttgtatatattatgcattgttcttaccaactga 38869568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 606 - 653
Target Start/End: Original strand, 39869810 - 39869857
Alignment:
Q  606 ttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    ||||||||||| |||||  |||||||||||||||| ||||||||||||    
T  39869810 ttcgaacctcggaccttgtatatattatgcattgtccttaccaactga 39869857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 620 - 655
Target Start/End: Complemental strand, 42943344 - 42943309
Alignment:
Q  620 cttacatatattatgcattgttcttaccaactgaat 655  Q
    ||||| ||||||||||||||||||||||||||||||    
T  42943344 cttacgtatattatgcattgttcttaccaactgaat 42943309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 606 - 653
Target Start/End: Original strand, 53633620 - 53633667
Alignment:
Q  606 ttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||||||| || ||||||||||||||||||||| | ||||||||||||    
T  53633620 ttcgaaccccggaccttacatatattatgcattatccttaccaactga 53633667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 605 - 655
Target Start/End: Original strand, 1743992 - 1744042
Alignment:
Q  605 gttcgaacctcgaaccttacatatattatgcattgttcttaccaactgaat 655  Q
    ||||||||| |||||||| ||||||||||| ||||| | ||||||||||||    
T  1743992 gttcgaaccccgaaccttgcatatattatgtattgtccataccaactgaat 1744042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 621 - 655
Target Start/End: Complemental strand, 5135124 - 5135090
Alignment:
Q  621 ttacatatattatgcattgttcttaccaactgaat 655  Q
    |||||||||||||||||||| ||||||||||||||    
T  5135124 ttacatatattatgcattgtccttaccaactgaat 5135090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 604 - 638
Target Start/End: Original strand, 7859493 - 7859527
Alignment:
Q  604 ggttcgaacctcgaaccttacatatattatgcatt 638  Q
    |||||||||| ||||||||||||||||||||||||    
T  7859493 ggttcgaaccccgaaccttacatatattatgcatt 7859527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 615 - 649
Target Start/End: Complemental strand, 26973410 - 26973376
Alignment:
Q  615 cgaaccttacatatattatgcattgttcttaccaa 649  Q
    |||||||||||||||||||||||||| ||||||||    
T  26973410 cgaaccttacatatattatgcattgtccttaccaa 26973376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 608 - 654
Target Start/End: Complemental strand, 28266772 - 28266726
Alignment:
Q  608 cgaacctcgaaccttacatatattatgcattgttcttaccaactgaa 654  Q
    |||||| || ||||| ||||||||||||||||| |||||||||||||    
T  28266772 cgaaccccggaccttgcatatattatgcattgtccttaccaactgaa 28266726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 609 - 655
Target Start/End: Original strand, 28430571 - 28430617
Alignment:
Q  609 gaacctcgaaccttacatatattatgcattgttcttaccaactgaat 655  Q
    |||||||  ||||| ||||||||||||||||||| ||||||||||||    
T  28430571 gaacctcagaccttgcatatattatgcattgttcgtaccaactgaat 28430617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 604 - 642
Target Start/End: Original strand, 28965778 - 28965816
Alignment:
Q  604 ggttcgaacctcgaaccttacatatattatgcattgttc 642  Q
    |||| ||||| ||||||||||||||||||||||||||||    
T  28965778 ggtttgaaccccgaaccttacatatattatgcattgttc 28965816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 595 - 653
Target Start/End: Original strand, 35191809 - 35191867
Alignment:
Q  595 ggtgtctaaggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||||||  |||||||||| |  ||||| ||||||||||||||||| ||||||||||||    
T  35191809 ggtgtctggggttcgaaccccagaccttgcatatattatgcattgtccttaccaactga 35191867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 603 - 653
Target Start/End: Original strand, 38559896 - 38559946
Alignment:
Q  603 aggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||||| ||||||  |||||| |||||||||||||||||| ||||||||||    
T  38559896 aggttcaaacctcagaccttatatatattatgcattgttcataccaactga 38559946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 607 - 653
Target Start/End: Original strand, 39100420 - 39100466
Alignment:
Q  607 tcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    ||||||||| ||||||  ||||||||||||||||||||| |||||||    
T  39100420 tcgaacctcaaaccttgtatatattatgcattgttcttatcaactga 39100466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 593 - 651
Target Start/End: Original strand, 40359795 - 40359853
Alignment:
Q  593 gtggtgtctaaggttcgaacctcgaaccttacatatattatgcattgttcttaccaact 651  Q
    ||||| ||| |||||| |||||||||||||| |||||| || | |||||||||||||||    
T  40359795 gtggtatctgaggttcaaacctcgaaccttatatatatcatacgttgttcttaccaact 40359853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 613 - 651
Target Start/End: Complemental strand, 41259022 - 41258984
Alignment:
Q  613 ctcgaaccttacatatattatgcattgttcttaccaact 651  Q
    |||||||||| ||||||||||||||||| ||||||||||    
T  41259022 ctcgaaccttgcatatattatgcattgtccttaccaact 41258984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 275 - 359
Target Start/End: Complemental strand, 797547 - 797462
Alignment:
Q  275 tagaagtaacaaaactaatttctata-ttaactattaaagatattatgataagcagtttggttgaaaagaaaatgtgacatgccag 359  Q
    |||||||| |||||||| ||| || | |||| ||||||| ||||||| |||||| || |||| | ||||||||||||| |||||||    
T  797547 tagaagtagcaaaactattttgtaaaattaaatattaaacatattataataagcggtatggtgggaaagaaaatgtgatatgccag 797462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 604 - 653
Target Start/End: Complemental strand, 2563989 - 2563940
Alignment:
Q  604 ggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||| ||||||||||||||||||||||||| |||| || ||| |||||||    
T  2563989 ggtttgaacctcgaaccttacatatattattcattatttttatcaactga 2563940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 602 - 655
Target Start/End: Complemental strand, 4033482 - 4033429
Alignment:
Q  602 aaggttcgaacctcgaaccttacatatattatgcattgttcttaccaactgaat 655  Q
    |||||||||||  | || ||||||||||||||||||||||| || |||||||||    
T  4033482 aaggttcgaacaccaaatcttacatatattatgcattgttcatatcaactgaat 4033429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 604 - 653
Target Start/End: Original strand, 7464492 - 7464541
Alignment:
Q  604 ggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||| ||||| || ||||||||||||||||||||||| | ||||||||||    
T  7464492 ggtttgaaccccggaccttacatatattatgcattgtccctaccaactga 7464541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 275 - 351
Target Start/End: Original strand, 9507555 - 9507632
Alignment:
Q  275 tagaagtaacaaaactaatttctata-ttaactattaaagatattatgataagcagtttggttgaaaagaaaatgtga 351  Q
    ||||||||||||||||  ||| || | |||||||||| ||||||||| || ||| || |||| |||||||||||||||    
T  9507555 tagaagtaacaaaactgttttgtaaacttaactattacagatattataatgagcggtatggtggaaaagaaaatgtga 9507632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 275 - 351
Target Start/End: Original strand, 9515530 - 9515607
Alignment:
Q  275 tagaagtaacaaaactaatttctata-ttaactattaaagatattatgataagcagtttggttgaaaagaaaatgtga 351  Q
    ||||||||||||||||  ||| || | |||||||||| ||||||||| || ||| || |||| |||||||||||||||    
T  9515530 tagaagtaacaaaactgttttgtaaacttaactattacagatattataatgagcggtatggtggaaaagaaaatgtga 9515607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 128
Target Start/End: Complemental strand, 10514056 - 10514019
Alignment:
Q  91 attatgaaggatataaaaagatggagattataagaaaa 128  Q
    ||||||||||||||||||| |||||||| |||||||||    
T  10514056 attatgaaggatataaaaaaatggagatgataagaaaa 10514019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 609 - 653
Target Start/End: Original strand, 12043102 - 12043147
Alignment:
Q  609 gaacctcgaaccttacatatatt-atgcattgttcttaccaactga 653  Q
    |||||||||||||| |||||||| ||||||||| ||||||||||||    
T  12043102 gaacctcgaaccttgcatatattaatgcattgtccttaccaactga 12043147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 616 - 653
Target Start/End: Original strand, 16980367 - 16980404
Alignment:
Q  616 gaaccttacatatattatgcattgttcttaccaactga 653  Q
    ||||||| ||||||||||||||||| ||||||||||||    
T  16980367 gaaccttgcatatattatgcattgtccttaccaactga 16980404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 618 - 651
Target Start/End: Complemental strand, 21245839 - 21245806
Alignment:
Q  618 accttacatatattatgcattgttcttaccaact 651  Q
    ||||||||||||||||||||||| ||||||||||    
T  21245839 accttacatatattatgcattgtccttaccaact 21245806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 604 - 653
Target Start/End: Original strand, 21914072 - 21914121
Alignment:
Q  604 ggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||||||||| |  ||||| ||||||||||||||||| ||||||||||||    
T  21914072 ggttcgaaccccataccttgcatatattatgcattgtccttaccaactga 21914121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 604 - 653
Target Start/End: Original strand, 23653223 - 23653272
Alignment:
Q  604 ggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||||||||| ||| || | ||||||||||||| ||||||||||||||||    
T  23653223 ggttcgaaccccgacccctgcatatattatgcaatgttcttaccaactga 23653272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 604 - 653
Target Start/End: Original strand, 28244105 - 28244154
Alignment:
Q  604 ggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||||||||| || ||||| ||||| ||||||||||||| ||||||||||    
T  28244105 ggttcgaaccccggaccttgcatattttatgcattgttcataccaactga 28244154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 604 - 653
Target Start/End: Complemental strand, 41291784 - 41291735
Alignment:
Q  604 ggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    ||||||||||  ||||||| ||||| |||| |||||||||||||||||||    
T  41291784 ggttcgaacccagaaccttgcatattttattcattgttcttaccaactga 41291735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 609 - 654
Target Start/End: Original strand, 47040900 - 47040945
Alignment:
Q  609 gaacctcgaaccttacatatattatgcattgttcttaccaactgaa 654  Q
    ||||| ||||||||||||| |||||||||||||| || ||||||||    
T  47040900 gaaccccgaaccttacatacattatgcattgttcatatcaactgaa 47040945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 100; Significance: 6e-49; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 755 - 938
Target Start/End: Complemental strand, 7109171 - 7108988
Alignment:
Q  755 tctggtaatgaacagtcttgccaacgactagcaccaacgacaacatcttcattatctctcaccacaacaccaatatcccatttatcactctctatcgaat 854  Q
    |||||| ||||| || ||||||||  ||||||||||||||||||| ||||||||||||||||||||||||||||| |||| ||||||| |||||||| |     
T  7109171 tctggtgatgaaaagacttgccaagaactagcaccaacgacaacaccttcattatctctcaccacaacaccaataccccacttatcaccctctatcggac 7109072  T
Q  855 ctgctacgtcaacattaagcttaaagaaatcactaaacagaggtgtccaatgaacatcatatattggtaaaattggacctccac 938  Q
     | || |||| |||||||||||| ||||| |||||||  |||||||||||||||||||| ||||||| ||||||||||||||||    
T  7109071 tttctgcgtcgacattaagcttatagaaaccactaaaaggaggtgtccaatgaacatcagatattggcaaaattggacctccac 7108988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 98; E-Value: 9e-48
Query Start/End: Original strand, 757 - 938
Target Start/End: Complemental strand, 7103856 - 7103675
Alignment:
Q  757 tggtaatgaacagtcttgccaacgactagcaccaacgacaacatcttcattatctctcaccacaacaccaatatcccatttatcactctctatcgaatct 856  Q
    |||||||||| || ||||||||  ||||||| ||||||||||| ||||||||||||||||||||||||||||| |||| ||||||| |||||||| |  |    
T  7103856 tggtaatgaaaagacttgccaataactagcatcaacgacaacaccttcattatctctcaccacaacaccaataccccacttatcaccctctatcggactt 7103757  T
Q  857 gctacgtcaacattaagcttaaagaaatcactaaacagaggtgtccaatgaacatcatatattggtaaaattggacctccac 938  Q
     || ||||||||||||||||| ||||| |||||||  |||||||||||||||||||| | ||||| ||||||||||||||||    
T  7103756 tctgcgtcaacattaagcttatagaaaccactaaaaggaggtgtccaatgaacatcagaaattggcaaaattggacctccac 7103675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 70 - 208
Target Start/End: Complemental strand, 25794114 - 25793976
Alignment:
Q  70 attctactcttgcttatgcagattatgaaggatataaaaagatggagattataagaaaatacaaactgaatagctaagtaaatctaatcctgtggcagtg 169  Q
    |||||| ||||||||||||||||||||||||||||| ||||||| |||| |||||||||||||||||||||| || |||||||| |||||||||||| |     
T  25794114 attctaatcttgcttatgcagattatgaaggatatacaaagatgcagatgataagaaaatacaaactgaataacttagtaaatccaatcctgtggcaatt 25794015  T
Q  170 gcaaccattttgctcctctcaaacatttttacaaaaaga 208  Q
     |||||| |||||||||||||||||||||||||| ||||    
T  25794014 acaaccaatttgctcctctcaaacatttttacaagaaga 25793976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 90; E-Value: 6e-43
Query Start/End: Original strand, 781 - 934
Target Start/End: Original strand, 40756617 - 40756770
Alignment:
Q  781 actagcaccaacgacaacatcttcattatctctcaccacaacaccaatatcccatttatcactctctatcgaatctgctacgtcaacattaagcttaaag 880  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| | ||||| | ||||||||||||||  ||    
T  40756617 actagcaccaacgacaacaccttcattatctctcaccacaacaccaatatcccatttatcaccctctatcggacctgctgcatcaacattaagcttgtag 40756716  T
Q  881 aaatcactaaacagaggtgtccaatgaacatcatatattggtaaaattggacct 934  Q
    ||| |||||||  ||||||| |||||||||| | ||||||| ||||| ||||||    
T  40756717 aaaccactaaaaggaggtgttcaatgaacataagatattggcaaaatcggacct 40756770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 759 - 937
Target Start/End: Complemental strand, 2059142 - 2058964
Alignment:
Q  759 gtaatgaacagtcttgccaacgactagcaccaacgacaacatcttcattatctctcaccacaacaccaatatcccatttatcactctctatcgaatctgc 858  Q
    |||||||| || ||| ||||| ||||||||||||||| ||| |||||||||||||||| |||||||||||| | |||||| | | |||||||| | |||     
T  2059142 gtaatgaaaagactttccaacaactagcaccaacgaccacaccttcattatctctcacaacaacaccaatacctcatttacccccctctatcggacctgt 2059043  T
Q  859 tacgtcaacattaagcttaaagaaatcactaaacagaggtgtccaatgaacatcatatattggtaaaattggacctcca 937  Q
    | |||| ||||| |||||| |  || ||||||  || || ||||| ||||||||||||||  ||||  |||||||||||    
T  2059042 tgcgtccacatttagcttatatcaaccactaataaggggcgtccagtgaacatcatatatgagtaagtttggacctcca 2058964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 796 - 932
Target Start/End: Original strand, 11423001 - 11423137
Alignment:
Q  796 aacatcttcattatctctcaccacaacaccaatatcccatttatcactctctatcgaatctgctacgtcaacattaagcttaaagaaatcactaaacaga 895  Q
    |||| ||||||||||||| ||||||||||| ||| |||||||| |   || ||||  |  |||| | ||||||||||| ||| ||||| |||||||  ||    
T  11423001 aacaccttcattatctcttaccacaacaccgataccccatttaccctcctttatcagacttgctgcatcaacattaagattatagaaaccactaaaagga 11423100  T
Q  896 ggtgtccaatgaacatcatatattggtaaaattggac 932  Q
    |||||||||||||||| | ||||||| ||||||||||    
T  11423101 ggtgtccaatgaacattaaatattggcaaaattggac 11423137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 781 - 829
Target Start/End: Complemental strand, 28033597 - 28033549
Alignment:
Q  781 actagcaccaacgacaacatcttcattatctctcaccacaacaccaata 829  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  28033597 actagcatcaacgacaacatcttcattatctctcaccacaacaccaata 28033549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 605 - 653
Target Start/End: Complemental strand, 36071203 - 36071155
Alignment:
Q  605 gttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  36071203 gttcgaaccccgaaccttacatatattatgcattgtccttaccaactga 36071155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 863 - 938
Target Start/End: Original strand, 9742168 - 9742243
Alignment:
Q  863 tcaacattaagcttaaagaaatcactaaacagaggtgtccaatgaacatcatatattggtaaaattggacctccac 938  Q
    ||||||||||||||| ||||| | |||||  |||||||| ||||||||||| ||||||  ||||||||||||||||    
T  9742168 tcaacattaagcttatagaaacctctaaaaggaggtgtcaaatgaacatcagatattgacaaaattggacctccac 9742243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 863 - 938
Target Start/End: Original strand, 9745695 - 9745770
Alignment:
Q  863 tcaacattaagcttaaagaaatcactaaacagaggtgtccaatgaacatcatatattggtaaaattggacctccac 938  Q
    ||||||||||||||| |||||  ||||||  ||||||| |||||||||||||||||||  |||||||||| |||||    
T  9745695 tcaacattaagcttatagaaactactaaaaggaggtgttcaatgaacatcatatattgaaaaaattggacatccac 9745770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 863 - 938
Target Start/End: Original strand, 9747861 - 9747936
Alignment:
Q  863 tcaacattaagcttaaagaaatcactaaacagaggtgtccaatgaacatcatatattggtaaaattggacctccac 938  Q
    ||||||||||||||| ||||| |||| ||  |||||||||||||||||||| ||||||  ||||||| ||||||||    
T  9747861 tcaacattaagcttacagaaaccacttaaaggaggtgtccaatgaacatcagatattgaaaaaattgtacctccac 9747936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 604 - 650
Target Start/End: Complemental strand, 36479051 - 36479005
Alignment:
Q  604 ggttcgaacctcgaaccttacatatattatgcattgttcttaccaac 650  Q
    ||||||||||||||||||||||||||||||||||||| | |||||||    
T  36479051 ggttcgaacctcgaaccttacatatattatgcattgtccataccaac 36479005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 604 - 653
Target Start/End: Complemental strand, 19908752 - 19908703
Alignment:
Q  604 ggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    ||||||||||||| ||||| ||||||||||||||||| ||||||||||||    
T  19908752 ggttcgaacctcggaccttgcatatattatgcattgtccttaccaactga 19908703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 593 - 645
Target Start/End: Complemental strand, 29568657 - 29568605
Alignment:
Q  593 gtggtgtctaaggttcgaacctcgaaccttacatatattatgcattgttctta 645  Q
    |||||||||  ||||||||||||| ||||||||||||||||||||||| ||||    
T  29568657 gtggtgtctggggttcgaacctcggaccttacatatattatgcattgtcctta 29568605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 593 - 653
Target Start/End: Original strand, 34595926 - 34595986
Alignment:
Q  593 gtggtgtctaaggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||||||||  ||||| |||| ||||| |||||||||||||||||||| ||||||||||||    
T  34595926 gtggtgtctggggttcaaaccccgaactttacatatattatgcattgtccttaccaactga 34595986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 602 - 653
Target Start/End: Original strand, 7190447 - 7190498
Alignment:
Q  602 aaggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||||||||||  || || |||||||||||||||||||||||||||||||||    
T  7190447 aaggttcgaactccggacgttacatatattatgcattgttcttaccaactga 7190498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 604 - 655
Target Start/End: Complemental strand, 50668400 - 50668349
Alignment:
Q  604 ggttcgaacctcgaaccttacatatattatgcattgttcttaccaactgaat 655  Q
    |||| ||||| |||||||||||||||||||| ||||||| ||||||||||||    
T  50668400 ggtttgaaccccgaaccttacatatattatgtattgttcataccaactgaat 50668349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 593 - 647
Target Start/End: Original strand, 1657020 - 1657074
Alignment:
Q  593 gtggtgtctaaggttcgaacctcgaaccttacatatattatgcattgttcttacc 647  Q
    |||||||||  |||||||||| | |||||||||||||||||||||||| ||||||    
T  1657020 gtggtgtcttgggttcgaaccccaaaccttacatatattatgcattgtccttacc 1657074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 605 - 655
Target Start/End: Complemental strand, 51465396 - 51465346
Alignment:
Q  605 gttcgaacctcgaaccttacatatattatgcattgttcttaccaactgaat 655  Q
    ||||||||| ||| |||||||||||||||||||||| | ||||||||||||    
T  51465396 gttcgaaccccgacccttacatatattatgcattgtccataccaactgaat 51465346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 593 - 638
Target Start/End: Complemental strand, 1701680 - 1701635
Alignment:
Q  593 gtggtgtctaaggttcgaacctcgaaccttacatatattatgcatt 638  Q
    ||||||||| |||||||||||||| ||||| |||||||||||||||    
T  1701680 gtggtgtctgaggttcgaacctcggaccttgcatatattatgcatt 1701635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 604 - 653
Target Start/End: Complemental strand, 3936687 - 3936638
Alignment:
Q  604 ggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||||||||| || ||||| ||||||||||||||||||| ||||||||||    
T  3936687 ggttcgaaccccggaccttgcatatattatgcattgttcataccaactga 3936638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 604 - 653
Target Start/End: Original strand, 34960158 - 34960207
Alignment:
Q  604 ggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    ||||||||||||||| |||| |||||||||||||||||  ||||||||||    
T  34960158 ggttcgaacctcgaatcttatatatattatgcattgtttataccaactga 34960207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 618 - 655
Target Start/End: Original strand, 50380851 - 50380888
Alignment:
Q  618 accttacatatattatgcattgttcttaccaactgaat 655  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  50380851 accttacatatattatgcattgttcataccaactgaat 50380888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 604 - 653
Target Start/End: Original strand, 56551593 - 56551642
Alignment:
Q  604 ggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||| |||||||| ||||| ||||||||||||||||| ||||||||||||    
T  56551593 ggtttgaacctcggaccttgcatatattatgcattgtccttaccaactga 56551642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 603 - 655
Target Start/End: Original strand, 684994 - 685046
Alignment:
Q  603 aggttcgaacctcgaaccttacatatattatgcattgttcttaccaactgaat 655  Q
    ||||| ||||||| | ||||||||||| |||||||||||| ||||||||||||    
T  684994 aggtttgaacctcaagccttacatataatatgcattgttcataccaactgaat 685046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 609 - 653
Target Start/End: Complemental strand, 22411819 - 22411775
Alignment:
Q  609 gaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    ||||| |||||||||||||||||||||||||| | ||||||||||    
T  22411819 gaaccccgaaccttacatatattatgcattgtccataccaactga 22411775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 609 - 653
Target Start/End: Complemental strand, 23160095 - 23160051
Alignment:
Q  609 gaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||||||| ||||||||||||||||||||||| | ||||||||||    
T  23160095 gaacctcggaccttacatatattatgcattgtccctaccaactga 23160051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 593 - 653
Target Start/End: Original strand, 29808258 - 29808318
Alignment:
Q  593 gtggtgtctaaggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||||||| |||||||||||| |  ||||| ||||||||||||||||| |||| |||||||    
T  29808258 gtggtgtccaaggttcgaaccccataccttgcatatattatgcattgtccttatcaactga 29808318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 609 - 653
Target Start/End: Original strand, 39842018 - 39842062
Alignment:
Q  609 gaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    ||||||| |||||||||||||||||||||||| |||| |||||||    
T  39842018 gaacctcaaaccttacatatattatgcattgtccttatcaactga 39842062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 593 - 653
Target Start/End: Complemental strand, 43722836 - 43722776
Alignment:
Q  593 gtggtgtctaaggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    ||||||| || |||| ||||| || ||||||||||||||||||||||| | ||||||||||    
T  43722836 gtggtgtttagggtttgaaccccggaccttacatatattatgcattgtccataccaactga 43722776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 609 - 653
Target Start/End: Original strand, 46434766 - 46434810
Alignment:
Q  609 gaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    ||||||| |||||||||||||||||||||||| |||| |||||||    
T  46434766 gaacctcaaaccttacatatattatgcattgtccttatcaactga 46434810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 593 - 653
Target Start/End: Original strand, 46676488 - 46676548
Alignment:
Q  593 gtggtgtctaaggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||||||||  || ||||||| || ||||| ||||||||||||||||| ||||||||||||    
T  46676488 gtggtgtctgggggtcgaaccccggaccttgcatatattatgcattgtccttaccaactga 46676548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 604 - 652
Target Start/End: Complemental strand, 49473705 - 49473657
Alignment:
Q  604 ggttcgaacctcgaaccttacatatattatgcattgttcttaccaactg 652  Q
    |||||||||| || ||||| ||||||||||||||||| |||||||||||    
T  49473705 ggttcgaaccccggaccttgcatatattatgcattgtccttaccaactg 49473657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 609 - 653
Target Start/End: Complemental strand, 56096259 - 56096215
Alignment:
Q  609 gaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    ||||| |||||||||||||||||||||||||| |||| |||||||    
T  56096259 gaaccacgaaccttacatatattatgcattgtccttatcaactga 56096215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 606 - 653
Target Start/End: Original strand, 17656797 - 17656843
Alignment:
Q  606 ttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    ||||||||| ||||||||||||||||||||||||| | ||||||||||    
T  17656797 ttcgaacct-gaaccttacatatattatgcattgtccataccaactga 17656843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 604 - 647
Target Start/End: Original strand, 32923204 - 32923247
Alignment:
Q  604 ggttcgaacctcgaaccttacatatattatgcattgttcttacc 647  Q
    |||| ||||| |||||||||||||||||||||||||||| ||||    
T  32923204 ggtttgaaccccgaaccttacatatattatgcattgttcatacc 32923247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 618 - 653
Target Start/End: Original strand, 32923245 - 32923280
Alignment:
Q  618 accttacatatattatgcattgttcttaccaactga 653  Q
    ||||||||||||||||||||||||| ||||||||||    
T  32923245 accttacatatattatgcattgttcataccaactga 32923280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 603 - 638
Target Start/End: Original strand, 34968009 - 34968044
Alignment:
Q  603 aggttcgaacctcgaaccttacatatattatgcatt 638  Q
    ||||||||||||| ||||||||||||||||||||||    
T  34968009 aggttcgaacctcaaaccttacatatattatgcatt 34968044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 604 - 655
Target Start/End: Complemental strand, 44221507 - 44221456
Alignment:
Q  604 ggttcgaacctcgaaccttacatatattatgcattgttcttaccaactgaat 655  Q
    ||||||||||||  ||||| ||||||||||||||||| | ||||||||||||    
T  44221507 ggttcgaacctcagaccttgcatatattatgcattgtccataccaactgaat 44221456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 606 - 649
Target Start/End: Original strand, 45029608 - 45029651
Alignment:
Q  606 ttcgaacctcgaaccttacatatattatgcattgttcttaccaa 649  Q
    |||||||| | |||||||||||||||||||||||| ||||||||    
T  45029608 ttcgaaccccaaaccttacatatattatgcattgtccttaccaa 45029651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 610 - 653
Target Start/End: Complemental strand, 47704636 - 47704593
Alignment:
Q  610 aacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||||||||||||||||||||||| |||| ||| ||||||||||    
T  47704636 aacctcgaaccttacatatattatacattattcataccaactga 47704593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 603 - 653
Target Start/End: Complemental strand, 7230341 - 7230291
Alignment:
Q  603 aggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    ||||| ||||| || ||||| ||||||||||||||||| ||||||||||||    
T  7230341 aggtttgaaccccggaccttgcatatattatgcattgtccttaccaactga 7230291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 593 - 631
Target Start/End: Original strand, 32200791 - 32200829
Alignment:
Q  593 gtggtgtctaaggttcgaacctcgaaccttacatatatt 631  Q
    ||||||||||||||||||||| |||||||| ||||||||    
T  32200791 gtggtgtctaaggttcgaaccccgaaccttgcatatatt 32200829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 603 - 653
Target Start/End: Complemental strand, 48223628 - 48223578
Alignment:
Q  603 aggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    ||||| |||||||| |  ||| |||||||||||||||||||||||||||||    
T  48223628 aggtttgaacctcggattttaaatatattatgcattgttcttaccaactga 48223578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 620 - 654
Target Start/End: Original strand, 50937565 - 50937599
Alignment:
Q  620 cttacatatattatgcattgttcttaccaactgaa 654  Q
    |||||||||||||||| ||||||||||||||||||    
T  50937565 cttacatatattatgctttgttcttaccaactgaa 50937599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 604 - 653
Target Start/End: Original strand, 3299095 - 3299144
Alignment:
Q  604 ggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||| ||||||| |||||| |||||||||||||||||| | |||||||||    
T  3299095 ggtttgaacctcaaaccttgcatatattatgcattgttttaaccaactga 3299144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 604 - 653
Target Start/End: Complemental strand, 12058379 - 12058330
Alignment:
Q  604 ggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    ||||||||||| ||||||| ||||||||||||||| | |||||| |||||    
T  12058379 ggttcgaaccttgaaccttgcatatattatgcattatccttaccgactga 12058330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 620 - 653
Target Start/End: Complemental strand, 18004509 - 18004476
Alignment:
Q  620 cttacatatattatgcattgttcttaccaactga 653  Q
    ||||||||||||||||||| ||||||||||||||    
T  18004509 cttacatatattatgcattattcttaccaactga 18004476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 618 - 651
Target Start/End: Original strand, 22164284 - 22164317
Alignment:
Q  618 accttacatatattatgcattgttcttaccaact 651  Q
    ||||||||||||||||||||||||| ||||||||    
T  22164284 accttacatatattatgcattgttcctaccaact 22164317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 593 - 646
Target Start/End: Complemental strand, 25978388 - 25978335
Alignment:
Q  593 gtggtgtctaaggttcgaacctcgaaccttacatatattatgcattgttcttac 646  Q
    |||||||||  | ||||||||||| ||||| ||||||||||||||||| |||||    
T  25978388 gtggtgtctgggattcgaacctcggaccttgcatatattatgcattgtccttac 25978335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 593 - 638
Target Start/End: Complemental strand, 26315834 - 26315789
Alignment:
Q  593 gtggtgtctaaggttcgaacctcgaaccttacatatattatgcatt 638  Q
    |||||||||| ||||||||| |||||||||  ||||||||||||||    
T  26315834 gtggtgtctagggttcgaacatcgaaccttgtatatattatgcatt 26315789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 604 - 653
Target Start/End: Original strand, 28435249 - 28435298
Alignment:
Q  604 ggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||| ||||| |||||||| ||||||||||||||||| | ||||||||||    
T  28435249 ggtttgaaccccgaaccttgcatatattatgcattgtccataccaactga 28435298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 604 - 653
Target Start/End: Original strand, 40070969 - 40071018
Alignment:
Q  604 ggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||| |||| ||| ||||| ||||||||||||||||||| ||||||||||    
T  40070969 ggtttgaacttcggaccttgcatatattatgcattgttcataccaactga 40071018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 596 - 653
Target Start/End: Original strand, 42756099 - 42756156
Alignment:
Q  596 gtgtctaaggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||||| || |||||| | |||||||| ||||||||||||||||| |||| |||||||    
T  42756099 gtgtcttagattcgaatcccgaaccttgcatatattatgcattgtccttatcaactga 42756156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 858 - 935
Target Start/End: Complemental strand, 44527355 - 44527279
Alignment:
Q  858 ctacgtcaacattaagcttaaagaaatcactaaacagaggtgtccaatgaacatcatatattggtaaaattggacctc 935  Q
    |||| ||||||||||||||| ||||| |||||||  ||| | | |||||||||||||| |||||  ||||||||||||    
T  44527355 ctacatcaacattaagcttatagaaaccactaaaaggagatattcaatgaacatcatacattgg-caaattggacctc 44527279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 624 - 653
Target Start/End: Complemental strand, 44689532 - 44689503
Alignment:
Q  624 catatattatgcattgttcttaccaactga 653  Q
    ||||||||||||||||||||||||||||||    
T  44689532 catatattatgcattgttcttaccaactga 44689503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 604 - 653
Target Start/End: Original strand, 51436607 - 51436656
Alignment:
Q  604 ggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||||||||  |||||||| ||||||||||||||||||| || |||||||    
T  51436607 ggttcgaactccgaaccttgcatatattatgcattgttcgtatcaactga 51436656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 96; Significance: 1e-46; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 759 - 938
Target Start/End: Original strand, 11790744 - 11790923
Alignment:
Q  759 gtaatgaacagtcttgccaacgactagcaccaacgacaacatcttcattatctctcaccacaacaccaatatcccatttatcactctctatcgaatctgc 858  Q
    |||||||| || |||||||   |||||||||||||| |||| ||||||||||||||||| ||||||||||| |||| ||||||| |||||||  ||||||    
T  11790744 gtaatgaaaagacttgccagaaactagcaccaacgataacaccttcattatctctcaccgcaacaccaataccccacttatcaccctctatcagatctgc 11790843  T
Q  859 tacgtcaacattaagcttaaagaaatcactaaacagaggtgtccaatgaacatcatatattggtaaaattggacctccac 938  Q
    | | ||||||||||||||| ||||| |||||||  |||||||||||||||||||| ||||||| ||||||||||||||||    
T  11790844 tgcatcaacattaagcttatagaaaccactaaaaggaggtgtccaatgaacatcagatattggcaaaattggacctccac 11790923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 781 - 938
Target Start/End: Original strand, 14069160 - 14069317
Alignment:
Q  781 actagcaccaacgacaacatcttcattatctctcaccacaacaccaatatcccatttatcactctctatcgaatctgctacgtcaacattaagcttaaag 880  Q
    |||| |||||||||||||| |||||||||||||||| ||||| |||||  |||| |||||||  ||||||| | ||||| | ||||||||||||||| ||    
T  14069160 actaacaccaacgacaacaccttcattatctctcacaacaaccccaatgccccacttatcaccttctatcggacctgctgcatcaacattaagcttatag 14069259  T
Q  881 aaatcactaaacagaggtgtccaatgaacatcatatattggtaaaattggacctccac 938  Q
     || |||||||  |||||||||||||||||||| ||||||| ||||||||||||||||    
T  14069260 gaaccactaaaaggaggtgtccaatgaacatcagatattggcaaaattggacctccac 14069317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 781 - 938
Target Start/End: Original strand, 14379188 - 14379345
Alignment:
Q  781 actagcaccaacgacaacatcttcattatctctcaccacaacaccaatatcccatttatcactctctatcgaatctgctacgtcaacattaagcttaaag 880  Q
    |||| |||||||||||||| |||||||||||||||| ||||| |||||  |||| |||||||  ||||||| | ||||| | ||||||||||||||| ||    
T  14379188 actaacaccaacgacaacaccttcattatctctcacaacaaccccaatgccccacttatcaccttctatcggacctgctgcatcaacattaagcttatag 14379287  T
Q  881 aaatcactaaacagaggtgtccaatgaacatcatatattggtaaaattggacctccac 938  Q
     || |||||||  |||||||||||||||||||| ||||||| ||||||||||||||||    
T  14379288 gaaccactaaaaggaggtgtccaatgaacatcagatattggcaaaattggacctccac 14379345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 771 - 936
Target Start/End: Original strand, 9112048 - 9112213
Alignment:
Q  771 cttgccaacgactagcaccaacgacaacatcttcattatctctcaccacaacaccaatatcccatttatcactctctatcgaatctgctacgtcaacatt 870  Q
    ||||||||| ||||||| ||||||||||| |||||||||||||||| |||||||||||| |||||||||| | ||| |||||  ||||| | ||||||||    
T  9112048 cttgccaacaactagcagcaacgacaacaccttcattatctctcacaacaacaccaataccccatttatccccctcgatcgagcctgctgcatcaacatt 9112147  T
Q  871 aagcttaaagaaatcactaaacagaggt-gtccaatgaacatcatatattggtaaaattggacctcc 936  Q
     | |||| ||||| |||| || || ||| ||||||||||||| | |||| | |||| ||||||||||    
T  9112148 taacttatagaaaccact-aataggggtcgtccaatgaacattagatatggttaaatttggacctcc 9112213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 755 - 938
Target Start/End: Original strand, 25616562 - 25616744
Alignment:
Q  755 tctggtaatgaacagtcttgccaacgactagcaccaacgacaacatcttcattatctctcaccacaacaccaatatcccatttatcactctctatcgaat 854  Q
    |||||||||||| || |||||||    |||||||||| ||||||| |||||||||||||||| |||| ||||||| |||| ||||||   || |||  |     
T  25616562 tctggtaatgaaaagacttgccaggagctagcaccaaggacaacaccttcattatctctcac-acaataccaataccccacttatcatcttccatcagac 25616660  T
Q  855 ctgctacgtcaacattaagcttaaagaaatcactaaacagaggtgtccaatgaacatcatatattggtaaaattggacctccac 938  Q
    || ||   ||||||||||||||| ||||| |||||||  ||||||||||||| |||||| ||||||| ||||||| ||||||||    
T  25616661 ctactgtatcaacattaagcttatagaaaccactaaaaggaggtgtccaatgtacatcagatattggcaaaattgaacctccac 25616744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 603 - 653
Target Start/End: Complemental strand, 38553879 - 38553829
Alignment:
Q  603 aggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    ||||||||||| | |||||||||||||||||||||||||||||||||||||    
T  38553879 aggttcgaaccccaaaccttacatatattatgcattgttcttaccaactga 38553829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 604 - 653
Target Start/End: Original strand, 10236906 - 10236955
Alignment:
Q  604 ggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    ||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  10236906 ggttcgaacctcgaaccttgcatacattatgcattgttcttaccaactga 10236955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 604 - 654
Target Start/End: Complemental strand, 7908653 - 7908603
Alignment:
Q  604 ggttcgaacctcgaaccttacatatattatgcattgttcttaccaactgaa 654  Q
    |||||||||| |||||||||||||| ||||||||||| | |||||||||||    
T  7908653 ggttcgaaccccgaaccttacatattttatgcattgtccataccaactgaa 7908603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 603 - 653
Target Start/End: Original strand, 29237557 - 29237607
Alignment:
Q  603 aggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||||||||||  | ||||| ||||||||||||||||||||||||||||||    
T  29237557 aggttcgaaccctggaccttgcatatattatgcattgttcttaccaactga 29237607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 603 - 653
Target Start/End: Original strand, 32513169 - 32513219
Alignment:
Q  603 aggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||||||||||||||||||| |||||||||| |||||| ||||||| ||||    
T  32513169 aggttcgaacctcgaaccttgcatatattatacattgtacttaccagctga 32513219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 604 - 653
Target Start/End: Original strand, 34722021 - 34722071
Alignment:
Q  604 ggttcgaacctcgaaccttacatat-attatgcattgttcttaccaactga 653  Q
    ||||||||||||| ||||||||||| |||||||||||||| ||||||||||    
T  34722021 ggttcgaacctcggaccttacatattattatgcattgttcataccaactga 34722071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 604 - 653
Target Start/End: Complemental strand, 9522972 - 9522923
Alignment:
Q  604 ggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||||||||| | |||||| ||||||||||||||||||| ||||||||||    
T  9522972 ggttcgaaccccaaaccttgcatatattatgcattgttcataccaactga 9522923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 604 - 653
Target Start/End: Complemental strand, 21105663 - 21105614
Alignment:
Q  604 ggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    ||||||||||||||||||| ||||||||||||||| | | ||||||||||    
T  21105663 ggttcgaacctcgaaccttgcatatattatgcattttccataccaactga 21105614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 604 - 653
Target Start/End: Original strand, 27833402 - 27833451
Alignment:
Q  604 ggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||| ||||| || ||||||||||||||||||||||| ||||||||||||    
T  27833402 ggtttgaaccccggaccttacatatattatgcattgtccttaccaactga 27833451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 609 - 646
Target Start/End: Original strand, 42227811 - 42227848
Alignment:
Q  609 gaacctcgaaccttacatatattatgcattgttcttac 646  Q
    |||||||||||||||||||||||||||||||| |||||    
T  42227811 gaacctcgaaccttacatatattatgcattgtccttac 42227848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 604 - 653
Target Start/End: Complemental strand, 46987146 - 46987097
Alignment:
Q  604 ggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||||||||| || ||||| ||||||||||||||||| ||||||||||||    
T  46987146 ggttcgaaccccggaccttgcatatattatgcattgtccttaccaactga 46987097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 593 - 653
Target Start/End: Complemental strand, 2618750 - 2618690
Alignment:
Q  593 gtggtgtctaaggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    ||||||| | || |||||||| || ||||| ||||||||||||||||| ||||||||||||    
T  2618750 gtggtgtatgagattcgaaccccggaccttgcatatattatgcattgtccttaccaactga 2618690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 605 - 653
Target Start/End: Complemental strand, 39049732 - 39049684
Alignment:
Q  605 gttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    ||||||| | || ||||||||||||||||||||||| ||||||||||||    
T  39049732 gttcgaaacccggaccttacatatattatgcattgtgcttaccaactga 39049684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 609 - 653
Target Start/End: Original strand, 39280824 - 39280868
Alignment:
Q  609 gaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    ||||| || ||||| ||||||||||||||||||||||||||||||    
T  39280824 gaaccccggaccttgcatatattatgcattgttcttaccaactga 39280868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 618 - 653
Target Start/End: Complemental strand, 15015287 - 15015252
Alignment:
Q  618 accttacatatattatgcattgttcttaccaactga 653  Q
    |||||||||||||||||||||||||||| |||||||    
T  15015287 accttacatatattatgcattgttcttatcaactga 15015252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 618 - 653
Target Start/End: Complemental strand, 22327724 - 22327689
Alignment:
Q  618 accttacatatattatgcattgttcttaccaactga 653  Q
    ||||||||||||||||||||||||||||| ||||||    
T  22327724 accttacatatattatgcattgttcttacgaactga 22327689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 594 - 653
Target Start/End: Complemental strand, 27270305 - 27270246
Alignment:
Q  594 tggtgtctaaggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    ||||| || ||||||||||  |||||||| ||||||||||||||||| | ||||||||||    
T  27270305 tggtggctgaggttcgaactccgaaccttgcatatattatgcattgtccataccaactga 27270246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 604 - 651
Target Start/End: Original strand, 41619396 - 41619443
Alignment:
Q  604 ggttcgaacctcgaaccttacatatattatgcattgttcttaccaact 651  Q
    |||||||| |||||| |||||||||||||| |||||||| ||||||||    
T  41619396 ggttcgaatctcgaatcttacatatattatacattgttcctaccaact 41619443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 615 - 653
Target Start/End: Original strand, 3536266 - 3536304
Alignment:
Q  615 cgaaccttacatatattatgcattgttcttaccaactga 653  Q
    ||||||||||||||||||||||||||||  |||||||||    
T  3536266 cgaaccttacatatattatgcattgttccaaccaactga 3536304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 617 - 655
Target Start/End: Original strand, 23374644 - 23374682
Alignment:
Q  617 aaccttacatatattatgcattgttcttaccaactgaat 655  Q
    |||||||||||||||||||||| ||||||||||| ||||    
T  23374644 aaccttacatatattatgcattattcttaccaacagaat 23374682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 603 - 653
Target Start/End: Original strand, 24225981 - 24226031
Alignment:
Q  603 aggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||||||||||||| ||||||||||| ||||||||||| | ||| ||||||    
T  24225981 aggttcgaacctcggaccttacatattttatgcattgtccatacgaactga 24226031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 603 - 653
Target Start/End: Original strand, 27158887 - 27158937
Alignment:
Q  603 aggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    ||||| ||||||| ||| || |||||||||| |||||||||||||||||||    
T  27158887 aggtttgaacctcaaactttgcatatattattcattgttcttaccaactga 27158937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 620 - 654
Target Start/End: Original strand, 31885962 - 31885996
Alignment:
Q  620 cttacatatattatgcattgttcttaccaactgaa 654  Q
    ||||||||||||||||||||||| |||||||||||    
T  31885962 cttacatatattatgcattgttcataccaactgaa 31885996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 604 - 653
Target Start/End: Complemental strand, 2391067 - 2391018
Alignment:
Q  604 ggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||||||||| || | |||  |||||||||||||||||||||||||||||    
T  2391067 ggttcgaaccccggatcttgtatatattatgcattgttcttaccaactga 2391018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 615 - 648
Target Start/End: Complemental strand, 2756289 - 2756256
Alignment:
Q  615 cgaaccttacatatattatgcattgttcttacca 648  Q
    |||||||||||||||| |||||||||||||||||    
T  2756289 cgaaccttacatatataatgcattgttcttacca 2756256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 625 - 654
Target Start/End: Complemental strand, 4335995 - 4335966
Alignment:
Q  625 atatattatgcattgttcttaccaactgaa 654  Q
    ||||||||||||||||||||||||||||||    
T  4335995 atatattatgcattgttcttaccaactgaa 4335966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 624 - 653
Target Start/End: Complemental strand, 4398366 - 4398337
Alignment:
Q  624 catatattatgcattgttcttaccaactga 653  Q
    ||||||||||||||||||||||||||||||    
T  4398366 catatattatgcattgttcttaccaactga 4398337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 604 - 653
Target Start/End: Original strand, 7872749 - 7872798
Alignment:
Q  604 ggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||||||||| |  ||||| ||||||||||||||||| ||||||||||||    
T  7872749 ggttcgaaccccagaccttgcatatattatgcattgtccttaccaactga 7872798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 604 - 653
Target Start/End: Complemental strand, 18714508 - 18714459
Alignment:
Q  604 ggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||| ||||| || ||||| ||||||||||||||||| ||||||||||||    
T  18714508 ggtttgaaccccggaccttgcatatattatgcattgtccttaccaactga 18714459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 604 - 653
Target Start/End: Original strand, 22690037 - 22690086
Alignment:
Q  604 ggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||||||||| | |||||| ||||||||||||||| |||||| |||||||    
T  22690037 ggttcgaaccccaaaccttgcatatattatgcattattcttagcaactga 22690086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 604 - 641
Target Start/End: Original strand, 24099236 - 24099273
Alignment:
Q  604 ggttcgaacctcgaaccttacatatattatgcattgtt 641  Q
    ||||| |||| |||||||||||||||||||||||||||    
T  24099236 ggttcaaaccccgaaccttacatatattatgcattgtt 24099273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 604 - 653
Target Start/End: Complemental strand, 27263401 - 27263352
Alignment:
Q  604 ggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||||||||  |||||||| ||||||||||||||||| | ||||||||||    
T  27263401 ggttcgaactccgaaccttgcatatattatgcattgtccataccaactga 27263352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 605 - 654
Target Start/End: Complemental strand, 38139617 - 38139568
Alignment:
Q  605 gttcgaacctcgaaccttacatatattatgcattgttcttaccaactgaa 654  Q
    ||||||||| |||||||||||||| | ||||||||||| ||| |||||||    
T  38139617 gttcgaaccccgaaccttacatatctcatgcattgttcatactaactgaa 38139568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 593 - 653
Target Start/End: Complemental strand, 40890295 - 40890233
Alignment:
Q  593 gtggtgtctaaggttcgaacctcgaaccttacatatattat---gcattgttcttaccaactga 653  Q
    ||||||||| || ||||||||| ||||||||||||||||||   ||||||| ||||||||||||    
T  40890295 gtggtgtctgagattcgaacct-gaaccttacatatattattatgcattgtccttaccaactga 40890233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 604 - 653
Target Start/End: Original strand, 43539105 - 43539154
Alignment:
Q  604 ggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||| ||||| || ||||||||||||||||||||||||| || |||||||    
T  43539105 ggtttgaaccccggaccttacatatattatgcattgttcctatcaactga 43539154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 82; Significance: 3e-38; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 781 - 938
Target Start/End: Complemental strand, 19237591 - 19237434
Alignment:
Q  781 actagcaccaacgacaacatcttcattatctctcaccacaacaccaatatcccatttatcactctctatcgaatctgctacgtcaacattaagcttaaag 880  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||||||| |||| ||||||| |||||||| || || | | ||||| ||||||||| |     
T  19237591 actagcaccaacgacaacaccttcattatctctcaccgcaacaccaataccccacttatcaccctctatcggatatgttgcatcaacgttaagcttataa 19237492  T
Q  881 aaatcactaaacagaggtgtccaatgaacatcatatattggtaaaattggacctccac 938  Q
    ||| |||||||  |||||||||||||||||||| ||||||| ||||||| ||||||||    
T  19237491 aaaccactaaaaggaggtgtccaatgaacatcagatattggcaaaattgaacctccac 19237434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 781 - 938
Target Start/End: Complemental strand, 19310775 - 19310618
Alignment:
Q  781 actagcaccaacgacaacatcttcattatctctcaccacaacaccaatatcccatttatcactctctatcgaatctgctacgtcaacattaagcttaaag 880  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||||||| |||| ||||||| |||||||| || || | | ||||| ||||||||| |     
T  19310775 actagcaccaacgacaacaccttcattatctctcaccgcaacaccaataccccacttatcaccctctatcggatatgttgcatcaacgttaagcttataa 19310676  T
Q  881 aaatcactaaacagaggtgtccaatgaacatcatatattggtaaaattggacctccac 938  Q
    ||| |||||||  |||||||||||||||||||| ||||||| ||||||| ||||||||    
T  19310675 aaaccactaaaaggaggtgtccaatgaacatcagatattggcaaaattgaacctccac 19310618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 781 - 938
Target Start/End: Complemental strand, 8970119 - 8969962
Alignment:
Q  781 actagcaccaacgacaacatcttcattatctctcaccacaacaccaatatcccatttatcactctctatcgaatctgctacgtcaacattaagcttaaag 880  Q
    |||| |||||||||||||| ||||||||||||||||||||||||||||| |||| |||||||  ||||||  | ||||| | |||||||||| |||| |     
T  8970119 actaacaccaacgacaacaccttcattatctctcaccacaacaccaataccccacttatcaccttctatcagacctgctgcatcaacattaaacttataa 8970020  T
Q  881 aaatcactaaacagaggtgtccaatgaacatcatatattggtaaaattggacctccac 938  Q
    ||| ||||||| ||||||||||||||||||||| ||||||  |||||||||| |||||    
T  8970019 aaaccactaaaaagaggtgtccaatgaacatcacatattgacaaaattggacttccac 8969962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 781 - 938
Target Start/End: Original strand, 16435933 - 16436090
Alignment:
Q  781 actagcaccaacgacaacatcttcattatctctcaccacaacaccaatatcccatttatcactctctatcgaatctgctacgtcaacattaagcttaaag 880  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| || |||| ||||||| |||||||  |  |||| | ||| ||||||||||| ||    
T  16435933 actagcaccaacgacaacaccttcattatctctcaccacaacaccactaccccacttatcaccctctatcagacttgctgcatcagcattaagcttatag 16436032  T
Q  881 aaatcactaaacagaggtgtccaatgaacatcatatattggtaaaattggacctccac 938  Q
    ||| |||||||  ||||| || ||||||||||| ||||||| ||||||||||||||||    
T  16436033 aaaccactaaaaggaggtatctaatgaacatcaaatattggcaaaattggacctccac 16436090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 755 - 935
Target Start/End: Original strand, 9492767 - 9492947
Alignment:
Q  755 tctggtaatgaacagtcttgccaacgactagcaccaacgacaacatcttcattatctctcaccacaacaccaatatcccatttatcactctctatcgaat 854  Q
    |||||||||||| || |||| ||   ||||||| ||| |||||||  |||||||||||||||||||||||||||| ||| |||||||| |||||||| |     
T  9492767 tctggtaatgaaaagacttgtcaggaactagcatcaaggacaacactttcattatctctcaccacaacaccaataccccctttatcaccctctatcggac 9492866  T
Q  855 ctgctacgtcaacattaagcttaaagaaatcactaaacagaggtgtccaatgaacatcatatattggtaaaattggacctc 935  Q
    ||||| | |||| ||| |||||| ||||| |||||||  |||||||||||||||| ||| ||||||| |||||||||||||    
T  9492867 ctgctgcatcaatatttagcttatagaaaccactaaaaggaggtgtccaatgaacgtcagatattggcaaaattggacctc 9492947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 593 - 653
Target Start/End: Complemental strand, 36919382 - 36919322
Alignment:
Q  593 gtggtgtctaaggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    ||||||| ||| |||||||||| |||||||||||||||||| |||||||||||||||||||    
T  36919382 gtggtgtttaatgttcgaaccttgaaccttacatatattatacattgttcttaccaactga 36919322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 593 - 653
Target Start/End: Complemental strand, 9071029 - 9070969
Alignment:
Q  593 gtggtgtctaaggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    ||||||||| | |||||||||||| |||||||||||||||| |||||| ||||||||||||    
T  9071029 gtggtgtctgaagttcgaacctcggaccttacatatattatacattgtccttaccaactga 9070969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 593 - 644
Target Start/End: Complemental strand, 3102379 - 3102328
Alignment:
Q  593 gtggtgtctaaggttcgaacctcgaaccttacatatattatgcattgttctt 644  Q
    ||||||||| ||||||||||||| ||||||||||||||||| ||||||||||    
T  3102379 gtggtgtctgaggttcgaacctcaaaccttacatatattatacattgttctt 3102328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 594 - 651
Target Start/End: Complemental strand, 13477970 - 13477913
Alignment:
Q  594 tggtgtctaaggttcgaacctcgaaccttacatatattatgcattgttcttaccaact 651  Q
    |||| ||||||| ||||||||||||| || ||||||||||||||||| ||||||||||    
T  13477970 tggtatctaaggatcgaacctcgaacattgcatatattatgcattgtccttaccaact 13477913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 604 - 653
Target Start/End: Complemental strand, 44019609 - 44019560
Alignment:
Q  604 ggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    ||||||||| ||| ||||| ||||||||||||||||||||||||||||||    
T  44019609 ggttcgaacttcggaccttgcatatattatgcattgttcttaccaactga 44019560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 609 - 653
Target Start/End: Original strand, 1230667 - 1230711
Alignment:
Q  609 gaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||    
T  1230667 gaacctcaaaccttacatatattatgcattgttcctaccaactga 1230711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 593 - 653
Target Start/End: Complemental strand, 19778136 - 19778076
Alignment:
Q  593 gtggtgtctaaggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||||||||| | |||||||| || ||||| ||||||||||||||||| ||||||||||||    
T  19778136 gtggtgtctaggattcgaaccccggaccttgcatatattatgcattgtccttaccaactga 19778076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 593 - 653
Target Start/End: Complemental strand, 32878732 - 32878672
Alignment:
Q  593 gtggtgtctaaggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    ||||| |||| | ||| ||||||||||||  ||||||||||||||||||||||||||||||    
T  32878732 gtggtatctaggcttcaaacctcgaacctcgcatatattatgcattgttcttaccaactga 32878672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 593 - 653
Target Start/End: Complemental strand, 33445641 - 33445581
Alignment:
Q  593 gtggtgtctaaggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    ||||||||| ||||||||| ||| ||||||  |||||||||||||||||| ||||||||||    
T  33445641 gtggtgtctgaggttcgaatctcaaaccttgtatatattatgcattgttcctaccaactga 33445581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 606 - 645
Target Start/End: Complemental strand, 44146781 - 44146742
Alignment:
Q  606 ttcgaacctcgaaccttacatatattatgcattgttctta 645  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  44146781 ttcgaacctcgaaccttgcatatattatgcattgttctta 44146742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 603 - 649
Target Start/End: Original strand, 8078100 - 8078146
Alignment:
Q  603 aggttcgaacctcgaaccttacatatattatgcattgttcttaccaa 649  Q
    |||||||||| ||  ||||||||||||||||||||||||||||||||    
T  8078100 aggttcgaacatcagaccttacatatattatgcattgttcttaccaa 8078146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 603 - 653
Target Start/End: Original strand, 42208469 - 42208519
Alignment:
Q  603 aggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    ||||| |||||||| ||||| ||||||||||||||||| ||||||||||||    
T  42208469 aggtttgaacctcggaccttgcatatattatgcattgtccttaccaactga 42208519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 604 - 653
Target Start/End: Original strand, 9655998 - 9656047
Alignment:
Q  604 ggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    ||||||||||||| ||||| ||||| ||||||||||| ||||||||||||    
T  9655998 ggttcgaacctcggaccttgcatattttatgcattgtccttaccaactga 9656047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 606 - 654
Target Start/End: Complemental strand, 4830066 - 4830018
Alignment:
Q  606 ttcgaacctcgaaccttacatatattatgcattgttcttaccaactgaa 654  Q
    |||||||| |||||||| ||||||||||||||||| | |||||||||||    
T  4830066 ttcgaaccccgaaccttgcatatattatgcattgtccataccaactgaa 4830018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 606 - 653
Target Start/End: Complemental strand, 10320554 - 10320507
Alignment:
Q  606 ttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    ||||||||||  ||||||||||||||||||||| |||||| |||||||    
T  10320554 ttcgaacctcataccttacatatattatgcattattcttatcaactga 10320507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 606 - 653
Target Start/End: Complemental strand, 21557491 - 21557444
Alignment:
Q  606 ttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    ||||||||||| ||||||||||||||||||||||| | ||| ||||||    
T  21557491 ttcgaacctcggaccttacatatattatgcattgtccatactaactga 21557444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 604 - 651
Target Start/End: Complemental strand, 32192954 - 32192907
Alignment:
Q  604 ggttcgaacctcgaaccttacatatattatgcattgttcttaccaact 651  Q
    |||||||||| |||||||| ||||||||||||||||| | ||||||||    
T  32192954 ggttcgaaccccgaaccttgcatatattatgcattgtccataccaact 32192907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 755 - 834
Target Start/End: Complemental strand, 38311958 - 38311879
Alignment:
Q  755 tctggtaatgaacagtcttgccaacgactagcaccaacgacaacatcttcattatctctcaccacaacaccaatatccca 834  Q
    |||||||||||| || |||| |||| ||||||| |||| |||| | |||||| |||||| || |||||||||||| ||||    
T  38311958 tctggtaatgaaaagacttgacaacaactagcagcaaccacaataccttcataatctcttacaacaacaccaatacccca 38311879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 606 - 653
Target Start/End: Original strand, 38489205 - 38489252
Alignment:
Q  606 ttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||||||| |||||||| ||||||| |||||||||||||| |||||||    
T  38489205 ttcgaaccccgaaccttgcatatatcatgcattgttcttatcaactga 38489252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 606 - 653
Target Start/End: Complemental strand, 39774997 - 39774950
Alignment:
Q  606 ttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||||||||| |||||||||||| ||||| || |||||||||||||||    
T  39774997 ttcgaacctcaaaccttacatattttatgtatcgttcttaccaactga 39774950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 618 - 653
Target Start/End: Original strand, 43073451 - 43073486
Alignment:
Q  618 accttacatatattatgcattgttcttaccaactga 653  Q
    |||||||||||||||||||||||| |||||||||||    
T  43073451 accttacatatattatgcattgtttttaccaactga 43073486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 615 - 653
Target Start/End: Complemental strand, 8020359 - 8020321
Alignment:
Q  615 cgaaccttacatatattatgcattgttcttaccaactga 653  Q
    ||||||||||||||||||||| |||||| ||||||||||    
T  8020359 cgaaccttacatatattatgcgttgttcctaccaactga 8020321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 603 - 653
Target Start/End: Original strand, 8717475 - 8717525
Alignment:
Q  603 aggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    ||||| ||||| |||||||| ||||||||||||||||| | ||||||||||    
T  8717475 aggtttgaaccccgaaccttgcatatattatgcattgtccataccaactga 8717525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 595 - 653
Target Start/End: Complemental strand, 13105163 - 13105105
Alignment:
Q  595 ggtgtctaaggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    ||||||| ||||||||||| ||  |||| ||||||||||||||||| | ||||||||||    
T  13105163 ggtgtctgaggttcgaaccccggcccttgcatatattatgcattgtccctaccaactga 13105105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 603 - 653
Target Start/End: Original strand, 13357441 - 13357491
Alignment:
Q  603 aggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    ||||| |||||||| ||||| ||||||||||||||||| | ||||||||||    
T  13357441 aggtttgaacctcgtaccttgcatatattatgcattgtccataccaactga 13357491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 258 - 351
Target Start/End: Original strand, 22930988 - 22931082
Alignment:
Q  258 atataaaattatacgcatagaagtaacaaaactaattt-ctatattaactattaaagatattatgataagcagtttggttgaaaagaaaatgtga 351  Q
    ||||||||| ||| || ||||||||||||||||| ||| | |  |||||||||||||||||||| || |   || |||| |||||||||||||||    
T  22930988 atataaaatcataggcttagaagtaacaaaactattttgcaaacttaactattaaagatattataatgattggtatggtggaaaagaaaatgtga 22931082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 603 - 653
Target Start/End: Original strand, 27750904 - 27750954
Alignment:
Q  603 aggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    ||||||||||| || ||||| ||||||||||||| ||| ||||||||||||    
T  27750904 aggttcgaaccccggaccttgcatatattatgcactgtccttaccaactga 27750954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 593 - 651
Target Start/End: Original strand, 29924907 - 29924965
Alignment:
Q  593 gtggtgtctaaggttcgaacctcgaaccttacatatattatgcattgttcttaccaact 651  Q
    |||||||||  ||||  |||| |||||||| |||||||||||||||||||||| |||||    
T  29924907 gtggtgtctggggtttaaaccccgaaccttgcatatattatgcattgttcttaacaact 29924965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 603 - 653
Target Start/End: Original strand, 35102667 - 35102717
Alignment:
Q  603 aggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||||||||||||| | ||| ||||||||||||||||  ||||||||||||    
T  35102667 aggttcgaacctcggatcttgcatatattatgcattgaccttaccaactga 35102717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 615 - 653
Target Start/End: Original strand, 36588106 - 36588144
Alignment:
Q  615 cgaaccttacatatattatgcattgttcttaccaactga 653  Q
    ||||||||||||||||||| |||||||| ||||||||||    
T  36588106 cgaaccttacatatattatacattgttcctaccaactga 36588144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 609 - 655
Target Start/End: Complemental strand, 37141412 - 37141366
Alignment:
Q  609 gaacctcgaaccttacatatattatgcattgttcttaccaactgaat 655  Q
    ||||| |||||||| ||||||||||||||||| | ||||||||||||    
T  37141412 gaaccccgaaccttgcatatattatgcattgtccataccaactgaat 37141366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 604 - 653
Target Start/End: Complemental strand, 3650580 - 3650531
Alignment:
Q  604 ggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||| ||||| |||||||||||||||||||||||| ||  ||||||||||    
T  3650580 ggtttgaaccccgaaccttacatatattatgcattttttctaccaactga 3650531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 618 - 655
Target Start/End: Original strand, 7968955 - 7968992
Alignment:
Q  618 accttacatatattatgcattgttcttaccaactgaat 655  Q
    ||||| ||||||||||||||||| ||||||||||||||    
T  7968955 accttgcatatattatgcattgtccttaccaactgaat 7968992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 604 - 649
Target Start/End: Complemental strand, 9241075 - 9241030
Alignment:
Q  604 ggttcgaacctcgaaccttacatatattatgcattgttcttaccaa 649  Q
    |||| |||| ||| ||||||||||||||||||||||| ||||||||    
T  9241075 ggtttgaacatcggaccttacatatattatgcattgtacttaccaa 9241030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 604 - 649
Target Start/End: Original strand, 10732776 - 10732821
Alignment:
Q  604 ggttcgaacctcgaaccttacatatattatgcattgttcttaccaa 649  Q
    ||||||||||| |||||||  |||||||||||||||||| ||||||    
T  10732776 ggttcgaaccttgaaccttgtatatattatgcattgttcataccaa 10732821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 604 - 653
Target Start/End: Complemental strand, 11104824 - 11104775
Alignment:
Q  604 ggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||||||| | ||||||||  |||||||||||||||||| ||||||||||    
T  11104824 ggttcgaatcccgaaccttgtatatattatgcattgttcctaccaactga 11104775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 624 - 653
Target Start/End: Complemental strand, 18533709 - 18533680
Alignment:
Q  624 catatattatgcattgttcttaccaactga 653  Q
    ||||||||||||||||||||||||||||||    
T  18533709 catatattatgcattgttcttaccaactga 18533680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 604 - 653
Target Start/End: Original strand, 20469312 - 20469361
Alignment:
Q  604 ggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||||||||  |||||||| ||||||||||||||||||  ||||||||||    
T  20469312 ggttcgaactccgaaccttgcatatattatgcattgtttataccaactga 20469361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 596 - 653
Target Start/End: Complemental strand, 27129150 - 27129093
Alignment:
Q  596 gtgtctaaggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||||| ||||||||| |  |||| || ||||||||||||| ||||||||||||||||    
T  27129150 gtgtctgaggttcgaatcctgaactttgcatatattatgcaatgttcttaccaactga 27129093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 604 - 653
Target Start/End: Complemental strand, 30623353 - 30623304
Alignment:
Q  604 ggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||||||||| |  ||||| ||||||||||||||||| ||||||||||||    
T  30623353 ggttcgaaccccagaccttgcatatattatgcattgtccttaccaactga 30623304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 596 - 653
Target Start/End: Complemental strand, 31888094 - 31888037
Alignment:
Q  596 gtgtctaaggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||||||||||||||| |  | ||||| |||||||||| |||||| ||||||||||||    
T  31888094 gtgtctaaggttcgaatcatggaccttgcatatattatccattgtccttaccaactga 31888037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 603 - 640
Target Start/End: Original strand, 32115406 - 32115443
Alignment:
Q  603 aggttcgaacctcgaaccttacatatattatgcattgt 640  Q
    ||||| ||||| ||||||||||||||||||||||||||    
T  32115406 aggtttgaaccccgaaccttacatatattatgcattgt 32115443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 604 - 653
Target Start/End: Original strand, 38282840 - 38282889
Alignment:
Q  604 ggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    ||||||||||||| |||||  ||||| |||||||||| ||||||||||||    
T  38282840 ggttcgaacctcggaccttgtatatactatgcattgtccttaccaactga 38282889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 80; Significance: 5e-37; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 755 - 934
Target Start/End: Original strand, 32401868 - 32402046
Alignment:
Q  755 tctggtaatgaacagtcttgccaacgactagcaccaacgacaacatcttcattatctctcaccacaacaccaatatcccatttatcactctctatcgaat 854  Q
    |||||||||||| || ||||||||  |||| ||| || ||||||| ||||||||||||||||||||||||||||| |||| ||||||| ||| |||| |     
T  32401868 tctggtaatgaaaagacttgccaagaactaacactaaggacaacaccttcattatctctcaccacaacaccaataccccacttatcaccctcaatcggac 32401967  T
Q  855 ctgctacgtcaacattaagcttaaagaaatcactaaacagaggtgtccaatgaacatcatatattggtaaaattggacct 934  Q
    ||||| ||||||||||||||||| |||||  ||||||  |||||| ||||||||||||||||||||   |||||||||||    
T  32401968 ctgctgcgtcaacattaagcttatagaaactactaaaaggaggtg-ccaatgaacatcatatattgacgaaattggacct 32402046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 782 - 938
Target Start/End: Original strand, 27214255 - 27214411
Alignment:
Q  782 ctagcaccaacgacaacatcttcattatctctcaccacaacaccaatatcccatttatcactct-ctatcgaatctgctacgtcaacattaagcttaaag 880  Q
    |||||| | ||||||||| ||||||||||||| ||||||||||||||| |||| ||| | |||| |||||| | ||||| | ||||||||||||||| ||    
T  27214255 ctagcagctacgacaacaccttcattatctcttaccacaacaccaataccccacttacc-ctcttctatcggacctgctgcatcaacattaagcttatag 27214353  T
Q  881 aaatcactaaacagaggtgtccaatgaacatcatatattggtaaaattggacctccac 938  Q
    ||  |||||||  ||||||| |||||||||||| |||   | ||||||||||||||||    
T  27214354 aagccactaaaaggaggtgtacaatgaacatcagatacccgcaaaattggacctccac 27214411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 606 - 648
Target Start/End: Original strand, 18981192 - 18981234
Alignment:
Q  606 ttcgaacctcgaaccttacatatattatgcattgttcttacca 648  Q
    |||||||| ||||||||||||||||||||||||||||||||||    
T  18981192 ttcgaaccccgaaccttacatatattatgcattgttcttacca 18981234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 781 - 838
Target Start/End: Original strand, 4719225 - 4719282
Alignment:
Q  781 actagcaccaacgacaacatcttcattatctctcaccacaacaccaatatcccattta 838  Q
    |||||||| || |||||||||||||||||||||| |||||||||||||| || |||||    
T  4719225 actagcacaaatgacaacatcttcattatctctcgccacaacaccaataccctattta 4719282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 593 - 654
Target Start/End: Original strand, 21657388 - 21657449
Alignment:
Q  593 gtggtgtctaaggttcgaacctcgaaccttacatatattatgcattgttcttaccaactgaa 654  Q
    ||||||||| ||||| ||||||| |||||||||||||||||||||||| | ||| |||||||    
T  21657388 gtggtgtctgaggtttgaacctcaaaccttacatatattatgcattgtccctacaaactgaa 21657449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 593 - 653
Target Start/End: Original strand, 9123835 - 9123895
Alignment:
Q  593 gtggtgtctaaggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    ||||||||| |||||||||| ||| | |||||||||||||||||||||  |||||||||||    
T  9123835 gtggtgtctgaggttcgaacttcggatcttacatatattatgcattgtctttaccaactga 9123895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 593 - 653
Target Start/End: Complemental strand, 43108640 - 43108580
Alignment:
Q  593 gtggtgtctaaggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||||||| ||| ||||||||  ||||||| ||||||||||||||||| ||||||||||||    
T  43108640 gtggtgtccaagattcgaaccctgaaccttgcatatattatgcattgtccttaccaactga 43108580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 596 - 647
Target Start/End: Original strand, 2951361 - 2951411
Alignment:
Q  596 gtgtctaaggttcgaacctcgaaccttacatatattatgcattgttcttacc 647  Q
    ||||||| |||||||||||| |||||||||||||||||||||||| ||||||    
T  2951361 gtgtctagggttcgaacctc-aaccttacatatattatgcattgtccttacc 2951411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 618 - 653
Target Start/End: Complemental strand, 24438593 - 24438558
Alignment:
Q  618 accttacatatattatgcattgttcttaccaactga 653  Q
    ||||||||||||||||||||||||||||||||||||    
T  24438593 accttacatatattatgcattgttcttaccaactga 24438558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 603 - 653
Target Start/End: Complemental strand, 18391661 - 18391611
Alignment:
Q  603 aggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||||||||||||| ||||| ||||| ||||||||||| ||||||||||||    
T  18391661 aggttcgaacctcggaccttgcatattttatgcattgtccttaccaactga 18391611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 604 - 653
Target Start/End: Original strand, 5107246 - 5107295
Alignment:
Q  604 ggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    ||||||||||||| ||||| ||||||||||||||| ||| ||||||||||    
T  5107246 ggttcgaacctcggaccttgcatatattatgcattattcataccaactga 5107295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 616 - 653
Target Start/End: Original strand, 12909179 - 12909216
Alignment:
Q  616 gaaccttacatatattatgcattgttcttaccaactga 653  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  12909179 gaaccttacatatattatgcattgttcataccaactga 12909216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 604 - 649
Target Start/End: Complemental strand, 22745949 - 22745904
Alignment:
Q  604 ggttcgaacctcgaaccttacatatattatgcattgttcttaccaa 649  Q
    ||||||||||||| ||||||||||||||||||||| | ||||||||    
T  22745949 ggttcgaacctcgtaccttacatatattatgcattatccttaccaa 22745904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 604 - 653
Target Start/End: Complemental strand, 26409313 - 26409264
Alignment:
Q  604 ggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||||||||| || ||||||||||||||||||||||| | ||||||||||    
T  26409313 ggttcgaaccccggaccttacatatattatgcattgtccataccaactga 26409264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 604 - 653
Target Start/End: Complemental strand, 26655524 - 26655475
Alignment:
Q  604 ggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||||||||| || ||||||||||||||||||||||| | ||||||||||    
T  26655524 ggttcgaaccccggaccttacatatattatgcattgtccataccaactga 26655475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 604 - 653
Target Start/End: Complemental strand, 26927109 - 26927060
Alignment:
Q  604 ggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||||||||| || ||||||||||||||||||||||| | ||||||||||    
T  26927109 ggttcgaaccccggaccttacatatattatgcattgtccataccaactga 26927060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 609 - 654
Target Start/End: Complemental strand, 27903168 - 27903123
Alignment:
Q  609 gaacctcgaaccttacatatattatgcattgttcttaccaactgaa 654  Q
    ||||| |||||||| ||||||||||||||||||| |||||||||||    
T  27903168 gaaccccgaaccttgcatatattatgcattgttcataccaactgaa 27903123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 604 - 653
Target Start/End: Original strand, 31602826 - 31602875
Alignment:
Q  604 ggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||| ||| |||||||||| ||||||||||||||||||| ||||||||||    
T  31602826 ggtttgaatctcgaaccttgcatatattatgcattgttcataccaactga 31602875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 618 - 655
Target Start/End: Original strand, 36162904 - 36162941
Alignment:
Q  618 accttacatatattatgcattgttcttaccaactgaat 655  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  36162904 accttacatatattatgcattgttcataccaactgaat 36162941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 604 - 653
Target Start/End: Complemental strand, 39143774 - 39143725
Alignment:
Q  604 ggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||||||||||| |||||||||||||||||||| ||| | ||||||||||    
T  39143774 ggttcgaacctcaaaccttacatatattatgcaatgtccataccaactga 39143725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 605 - 653
Target Start/End: Original strand, 2705518 - 2705566
Alignment:
Q  605 gttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||||||||||  ||||||||||||||||| |||||||||| |||||||    
T  2705518 gttcgaacctcagaccttacatatattatgtattgttcttatcaactga 2705566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 605 - 649
Target Start/End: Complemental strand, 13547506 - 13547462
Alignment:
Q  605 gttcgaacctcgaaccttacatatattatgcattgttcttaccaa 649  Q
    ||||||||||||||||||||||| |||||||||| | ||||||||    
T  13547506 gttcgaacctcgaaccttacatacattatgcattatccttaccaa 13547462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 606 - 654
Target Start/End: Original strand, 16752505 - 16752553
Alignment:
Q  606 ttcgaacctcgaaccttacatatattatgcattgttcttaccaactgaa 654  Q
    |||||||| |||| ||| ||||||||||||||||| |||||||||||||    
T  16752505 ttcgaaccccgaatcttgcatatattatgcattgtccttaccaactgaa 16752553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 605 - 653
Target Start/End: Original strand, 23118053 - 23118101
Alignment:
Q  605 gttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    ||||||||| | |||||||||||||||||||||||| |||| |||||||    
T  23118053 gttcgaaccccaaaccttacatatattatgcattgtccttatcaactga 23118101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 593 - 653
Target Start/End: Original strand, 26034598 - 26034658
Alignment:
Q  593 gtggtgtctaaggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||||| ||| | ||||| || |||||||| ||||||||||||||||||| ||||||||||    
T  26034598 gtggtggctaggtttcgatccacgaacctttcatatattatgcattgttcataccaactga 26034658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 615 - 651
Target Start/End: Original strand, 27651542 - 27651578
Alignment:
Q  615 cgaaccttacatatattatgcattgttcttaccaact 651  Q
    |||||||||||||||||||||||||| ||||||||||    
T  27651542 cgaaccttacatatattatgcattgtccttaccaact 27651578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 593 - 653
Target Start/End: Original strand, 31708136 - 31708196
Alignment:
Q  593 gtggtgtctaaggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    ||||||||  ||||||||||| |  ||||| ||||||||||||||||||| ||||||||||    
T  31708136 gtggtgtccgaggttcgaaccccagaccttgcatatattatgcattgttcataccaactga 31708196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 604 - 653
Target Start/End: Original strand, 35807742 - 35807793
Alignment:
Q  604 ggttcgaacctcgaaccttacatatattatg--cattgttcttaccaactga 653  Q
    |||||||||||| |||||| |||||||||||  |||||||||||||||||||    
T  35807742 ggttcgaacctcaaaccttgcatatattatgcacattgttcttaccaactga 35807793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 606 - 653
Target Start/End: Complemental strand, 11647255 - 11647208
Alignment:
Q  606 ttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||||||| | |||||| ||||||||||||||||| ||||||||||||    
T  11647255 ttcgaaccccaaaccttgcatatattatgcattgtccttaccaactga 11647208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 618 - 653
Target Start/End: Original strand, 18278274 - 18278309
Alignment:
Q  618 accttacatatattatgcattgttcttaccaactga 653  Q
    ||||| ||||||||||||||||||||||||||||||    
T  18278274 accttgcatatattatgcattgttcttaccaactga 18278309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 602 - 653
Target Start/End: Complemental strand, 31545933 - 31545882
Alignment:
Q  602 aaggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    ||||||||||||| ||||||| ||||||||||||||| | || |||||||||    
T  31545933 aaggttcgaaccttgaaccttgcatatattatgcattatcctaaccaactga 31545882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 606 - 653
Target Start/End: Complemental strand, 34702548 - 34702501
Alignment:
Q  606 ttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||||||| || ||||| ||||||||||||||||| ||||||||||||    
T  34702548 ttcgaaccccggacctttcatatattatgcattgtccttaccaactga 34702501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 603 - 653
Target Start/End: Complemental strand, 6894157 - 6894107
Alignment:
Q  603 aggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    ||||||||||| |||||||| ||||| || |||||||||| ||||||||||    
T  6894157 aggttcgaaccccgaaccttgcatattttttgcattgttcataccaactga 6894107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 607 - 653
Target Start/End: Original strand, 15105114 - 15105160
Alignment:
Q  607 tcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    ||||||| | ||||||| ||||||||||||||||| |||||||||||    
T  15105114 tcgaaccccaaaccttatatatattatgcattgtttttaccaactga 15105160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 606 - 640
Target Start/End: Original strand, 42854323 - 42854357
Alignment:
Q  606 ttcgaacctcgaaccttacatatattatgcattgt 640  Q
    |||||||||| ||||||||||||||||||||||||    
T  42854323 ttcgaacctcaaaccttacatatattatgcattgt 42854357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 624 - 653
Target Start/End: Original strand, 1669601 - 1669630
Alignment:
Q  624 catatattatgcattgttcttaccaactga 653  Q
    ||||||||||||||||||||||||||||||    
T  1669601 catatattatgcattgttcttaccaactga 1669630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 593 - 654
Target Start/End: Complemental strand, 3955617 - 3955556
Alignment:
Q  593 gtggtgtctaaggttcgaacctcgaaccttacatatattatgcattgttcttaccaactgaa 654  Q
    |||||||||  | |||||||| ||||| ||||||||||||||||||||  ||||||| ||||    
T  3955617 gtggtgtctgggattcgaaccccgaacattacatatattatgcattgtctttaccaattgaa 3955556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 604 - 653
Target Start/End: Original strand, 11637573 - 11637622
Alignment:
Q  604 ggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||||||||| |||||||| ||||| ||||||||||| | ||||||||||    
T  11637573 ggttcgaaccccgaaccttgcatattttatgcattgtccataccaactga 11637622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 617 - 654
Target Start/End: Complemental strand, 16193154 - 16193117
Alignment:
Q  617 aaccttacatatattatgcattgttcttaccaactgaa 654  Q
    |||||||||||| ||||||||||||| |||||||||||    
T  16193154 aaccttacatattttatgcattgttcataccaactgaa 16193117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 604 - 653
Target Start/End: Original strand, 16579375 - 16579424
Alignment:
Q  604 ggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||| ||||| || ||||| ||||||||||||||||||| ||||||||||    
T  16579375 ggtttgaaccacggaccttgcatatattatgcattgttcataccaactga 16579424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 605 - 654
Target Start/End: Complemental strand, 25709792 - 25709743
Alignment:
Q  605 gttcgaacctcgaaccttacatatattatgcattgttcttaccaactgaa 654  Q
    |||| ||||||| ||||| |||||||||||||||||| ||| ||||||||    
T  25709792 gttcaaacctcggaccttgcatatattatgcattgtttttatcaactgaa 25709743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 604 - 653
Target Start/End: Complemental strand, 29695075 - 29695026
Alignment:
Q  604 ggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||| ||||| |||||||||||||||||||||||||| | || |||||||    
T  29695075 ggtttgaaccacgaaccttacatatattatgcattgtccatatcaactga 29695026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 609 - 653
Target Start/End: Complemental strand, 29904476 - 29904431
Alignment:
Q  609 gaacctcgaaccttacatatattatgcattgttctt-accaactga 653  Q
    |||||||||||||||||||||||||| ||||| ||| |||||||||    
T  29904476 gaacctcgaaccttacatatattatgtattgtccttaaccaactga 29904431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 604 - 637
Target Start/End: Original strand, 37073769 - 37073802
Alignment:
Q  604 ggttcgaacctcgaaccttacatatattatgcat 637  Q
    |||||||||| |||||||||||||||||||||||    
T  37073769 ggttcgaaccccgaaccttacatatattatgcat 37073802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 609 - 654
Target Start/End: Original strand, 37791169 - 37791214
Alignment:
Q  609 gaacctcgaaccttacatatattatgcattgttcttaccaactgaa 654  Q
    |||||||||||||| |||||||||||| |||||  |||||||||||    
T  37791169 gaacctcgaaccttgcatatattatgcgttgtttctaccaactgaa 37791214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 604 - 653
Target Start/End: Complemental strand, 37932390 - 37932341
Alignment:
Q  604 ggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||||||||| || ||||| ||||||||||||||||| | ||||||||||    
T  37932390 ggttcgaaccccggaccttgcatatattatgcattgtccataccaactga 37932341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 624 - 653
Target Start/End: Original strand, 39917905 - 39917934
Alignment:
Q  624 catatattatgcattgttcttaccaactga 653  Q
    ||||||||||||||||||||||||||||||    
T  39917905 catatattatgcattgttcttaccaactga 39917934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 618 - 655
Target Start/End: Complemental strand, 42515853 - 42515816
Alignment:
Q  618 accttacatatattatgcattgttcttaccaactgaat 655  Q
    ||||||||||||||||||||||| | ||||||||||||    
T  42515853 accttacatatattatgcattgtccataccaactgaat 42515816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0524 (Bit Score: 71; Significance: 1e-31; HSPs: 1)
Name: scaffold0524
Description:

Target: scaffold0524; HSP #1
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 781 - 931
Target Start/End: Original strand, 10023 - 10173
Alignment:
Q  781 actagcaccaacgacaacatcttcattatctctcaccacaacaccaatatcccatttatcactctctatcgaatctgctacgtcaacattaagcttaaag 880  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||  ||| |||| ||||||| || ||||| |  |||||| ||||||||||||||| |     
T  10023 actagcaccgacgacaacaccttcattatctctcaccacaacactgataccccacttatcaccctttatcggacgtgctacatcaacattaagcttataa 10122  T
Q  881 aaatcactaaacagaggtgtccaatgaacatcatatattggtaaaattgga 931  Q
    ||| ||||||| ||||||||| ||||||||||| |||||||  ||||||||    
T  10123 aaaccactaaaaagaggtgtcaaatgaacatcagatattggctaaattgga 10173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 70; Significance: 5e-31; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 789 - 938
Target Start/End: Complemental strand, 17538854 - 17538705
Alignment:
Q  789 caacgacaacatcttcattatctctcaccacaacaccaatatcccatttatcactctctatcgaatctgctacgtcaacattaagcttaaagaaatcact 888  Q
    ||||||||||| |||||| |||||||||||||||| |||||||||| ||||| | ||||||||||  |||| | ||||||||||||||| ||||| ||||    
T  17538854 caacgacaacaccttcatcatctctcaccacaacatcaatatcccacttatccccctctatcgaacatgctccatcaacattaagcttatagaaaccact 17538755  T
Q  889 aaacagaggtgtccaatgaacatcatatattggtaaaattggacctccac 938  Q
    |||  |||||||| ||||||||||| |||||   |||||| |||||||||    
T  17538754 aaaaggaggtgtcaaatgaacatcagatattaacaaaatttgacctccac 17538705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 755 - 938
Target Start/End: Complemental strand, 26024718 - 26024532
Alignment:
Q  755 tctggtaatgaacagtcttgccaacgactagcaccaacgacaacatcttcattatctctcaccacaacaccaatatcccatttatcactctctatcgaat 854  Q
    |||||||||||| || |||||||   || | |||||||||||||| |||||||||||||||  |||||||||||| |||| | |||||  ||||||| |     
T  26024718 tctggtaatgaagagacttgccaggaaccaacaccaacgacaacaccttcattatctctcaaaacaacaccaataccccactcatcaccttctatcggac 26024619  T
Q  855 ctgctacgtcaacattaagcttaaagaaatcactaaa---cagaggtgtccaatgaacatcatatattggtaaaattggacctccac 938  Q
    ||||| | ||||||| ||||||| ||||| |||||||     |||||||||||||||||| | ||||||| |||| |||||||||||    
T  26024618 ctgctgcatcaacatcaagcttatagaaaccactaaatggaggaggtgtccaatgaacattagatattggcaaaactggacctccac 26024532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 861 - 938
Target Start/End: Original strand, 5953598 - 5953675
Alignment:
Q  861 cgtcaacattaagcttaaagaaatcactaaacagaggtgtccaatgaacatcatatattggtaaaattggacctccac 938  Q
    |||||||||| |||||| | ||| |||||||  ||||||||  |||||||||| ||||||||||||||||||||||||    
T  5953598 cgtcaacattgagcttataaaaaccactaaaaggaggtgtcatatgaacatcaaatattggtaaaattggacctccac 5953675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 593 - 653
Target Start/End: Original strand, 37320507 - 37320567
Alignment:
Q  593 gtggtgtctaaggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||||||| | ||||||||||||||||||| |||||||||||||||||  |||||||||||    
T  37320507 gtggtgtccatggttcgaacctcgaaccttgcatatattatgcattgtctttaccaactga 37320567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 755 - 877
Target Start/End: Complemental strand, 23496975 - 23496863
Alignment:
Q  755 tctggtaatgaacagtcttgccaacgactagcaccaacgacaacatcttcattatctctcaccacaacaccaatatcccatttatcactctctatcgaat 854  Q
    |||||||||||| || ||||||||  ||||||||||||||||||| |||||||||||          |||||||| |||| ||||||| ||||||||||     
T  23496975 tctggtaatgaaaagacttgccaagaactagcaccaacgacaacaccttcattatct----------caccaataccccacttatcaccctctatcgaac 23496886  T
Q  855 ctgctacgtcaacattaagctta 877  Q
    || || | |||||||||||||||    
T  23496885 ctactgcatcaacattaagctta 23496863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 604 - 653
Target Start/End: Original strand, 25274830 - 25274879
Alignment:
Q  604 ggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||||||||| |  ||||||||||||||||||||||||||||||||||||    
T  25274830 ggttcgaaccccagaccttacatatattatgcattgttcttaccaactga 25274879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 593 - 653
Target Start/End: Complemental strand, 12124616 - 12124556
Alignment:
Q  593 gtggtgtctaaggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    ||||||| | ||||||||||| || ||||| ||||||||||||||||| ||||||||||||    
T  12124616 gtggtgtttgaggttcgaaccccggaccttgcatatattatgcattgtccttaccaactga 12124556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 610 - 650
Target Start/End: Complemental strand, 21497721 - 21497681
Alignment:
Q  610 aacctcgaaccttacatatattatgcattgttcttaccaac 650  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  21497721 aacctcgaaccttgcatatattatgcattgttcttaccaac 21497681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 605 - 653
Target Start/End: Complemental strand, 35727496 - 35727448
Alignment:
Q  605 gttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    ||||||||| | |||||| ||||||||||||||||||||||||||||||    
T  35727496 gttcgaaccccaaaccttgcatatattatgcattgttcttaccaactga 35727448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 615 - 654
Target Start/End: Complemental strand, 2429065 - 2429026
Alignment:
Q  615 cgaaccttacatatattatgcattgttcttaccaactgaa 654  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  2429065 cgaaccttacatatattatgcattgtccttaccaactgaa 2429026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 615 - 654
Target Start/End: Original strand, 44488022 - 44488061
Alignment:
Q  615 cgaaccttacatatattatgcattgttcttaccaactgaa 654  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  44488022 cgaaccttacatatattatgcattgtccttaccaactgaa 44488061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 607 - 653
Target Start/End: Complemental strand, 13196757 - 13196711
Alignment:
Q  607 tcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    ||||||| |||||||| ||||||||||||||||||| ||||||||||    
T  13196757 tcgaaccccgaaccttgcatatattatgcattgttcataccaactga 13196711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 604 - 653
Target Start/End: Complemental strand, 8543008 - 8542959
Alignment:
Q  604 ggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    ||||| |||||||||||||||||||| |||||||||||| ||| ||||||    
T  8543008 ggttcaaacctcgaaccttacatataatatgcattgttcctactaactga 8542959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 620 - 653
Target Start/End: Complemental strand, 20517066 - 20517033
Alignment:
Q  620 cttacatatattatgcattgttcttaccaactga 653  Q
    ||||||||||||||||||||||||||||||||||    
T  20517066 cttacatatattatgcattgttcttaccaactga 20517033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 593 - 654
Target Start/End: Complemental strand, 22520288 - 22520227
Alignment:
Q  593 gtggtgtctaaggttcgaacctcgaaccttacatatattatgcattgttcttaccaactgaa 654  Q
    |||||||||| |||| |||||||   |||| ||||||||||||||||||||||| |||||||    
T  22520288 gtggtgtctagggtttgaacctcaggccttgcatatattatgcattgttcttactaactgaa 22520227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 604 - 653
Target Start/End: Complemental strand, 24593436 - 24593387
Alignment:
Q  604 ggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||||||||| || ||||| ||||||||||||||||| ||||||||||||    
T  24593436 ggttcgaaccccggaccttgcatatattatgcattgtccttaccaactga 24593387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 593 - 653
Target Start/End: Original strand, 2687365 - 2687424
Alignment:
Q  593 gtggtgtctaaggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||||||| | |||||||||| ||||| || ||||||| ||||||||||||||||||||||    
T  2687365 gtggtgtccagggttcgaacc-cgaactttgcatatataatgcattgttcttaccaactga 2687424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 613 - 653
Target Start/End: Complemental strand, 3196611 - 3196571
Alignment:
Q  613 ctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||||||||||||||||||||||||||||| || |||||||    
T  3196611 ctcgaaccttacatatattatgcattgttcatatcaactga 3196571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 605 - 653
Target Start/End: Complemental strand, 4238818 - 4238770
Alignment:
Q  605 gttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    ||||||||| |||||||||||||||||||||||||| | ||| ||||||    
T  4238818 gttcgaaccccgaaccttacatatattatgcattgtccatactaactga 4238770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 593 - 653
Target Start/End: Complemental strand, 12124755 - 12124695
Alignment:
Q  593 gtggtgtctaaggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    ||||||| | ||||||||||  || ||||| ||||||||||||||||| ||||||||||||    
T  12124755 gtggtgtttgaggttcgaactccggaccttgcatatattatgcattgtccttaccaactga 12124695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 609 - 653
Target Start/End: Original strand, 20120727 - 20120771
Alignment:
Q  609 gaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    ||||| |||||||| ||||||||||||||||| ||||||||||||    
T  20120727 gaaccccgaaccttgcatatattatgcattgtccttaccaactga 20120771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 609 - 653
Target Start/End: Original strand, 25395448 - 25395492
Alignment:
Q  609 gaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||||| ||||||| ||||||||||||||||||| ||||||||||    
T  25395448 gaaccttgaaccttgcatatattatgcattgttcctaccaactga 25395492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 604 - 644
Target Start/End: Original strand, 43356543 - 43356583
Alignment:
Q  604 ggttcgaacctcgaaccttacatatattatgcattgttctt 644  Q
    ||||||||||||| ||||| |||||||||||||||||||||    
T  43356543 ggttcgaacctcggaccttgcatatattatgcattgttctt 43356583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 606 - 653
Target Start/End: Original strand, 12893247 - 12893294
Alignment:
Q  606 ttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    ||||||||| | |||||||||||||||| ||||||||||| |||||||    
T  12893247 ttcgaaccttggaccttacatatattatacattgttcttatcaactga 12893294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 606 - 653
Target Start/End: Original strand, 16221349 - 16221396
Alignment:
Q  606 ttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||||||| |||||||| ||||| ||||||||||||| ||||||||||    
T  16221349 ttcgaaccccgaaccttgcatattttatgcattgttcataccaactga 16221396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 618 - 653
Target Start/End: Original strand, 23250335 - 23250370
Alignment:
Q  618 accttacatatattatgcattgttcttaccaactga 653  Q
    ||||| ||||||||||||||||||||||||||||||    
T  23250335 accttgcatatattatgcattgttcttaccaactga 23250370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 614 - 653
Target Start/End: Original strand, 26133531 - 26133570
Alignment:
Q  614 tcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    ||||||||| ||||||||||||||||| ||||||||||||    
T  26133531 tcgaaccttgcatatattatgcattgtccttaccaactga 26133570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 614 - 653
Target Start/End: Complemental strand, 33966371 - 33966332
Alignment:
Q  614 tcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    ||||||||| ||||||||||||||||||| ||||||||||    
T  33966371 tcgaaccttgcatatattatgcattgttcataccaactga 33966332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 606 - 652
Target Start/End: Original strand, 34843517 - 34843563
Alignment:
Q  606 ttcgaacctcgaaccttacatatattatgcattg-ttcttaccaactg 652  Q
    ||||||||| |||||||||||||||||||||||| |||||||||||||    
T  34843517 ttcgaacct-gaaccttacatatattatgcattgtttcttaccaactg 34843563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 606 - 653
Target Start/End: Original strand, 40099387 - 40099433
Alignment:
Q  606 ttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||||||||||| |||| ||||||||||||||||| ||||||||||||    
T  40099387 ttcgaacctcga-ccttgcatatattatgcattgtccttaccaactga 40099433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 593 - 651
Target Start/End: Complemental strand, 10065544 - 10065486
Alignment:
Q  593 gtggtgtctaaggttcgaacctcgaaccttacatatattatgcattgttcttaccaact 651  Q
    |||||||| | ||||||||||  ||| ||| ||||||||||||||||| ||||||||||    
T  10065544 gtggtgtccagggttcgaaccctgaaacttgcatatattatgcattgtccttaccaact 10065486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 605 - 651
Target Start/End: Complemental strand, 15613008 - 15612962
Alignment:
Q  605 gttcgaacctcgaaccttacatatattatgcattgttcttaccaact 651  Q
    |||| ||||||||||||||| ||||||||||||||| ||||| ||||    
T  15613008 gttcaaacctcgaaccttacgtatattatgcattgtccttacaaact 15612962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 604 - 654
Target Start/End: Complemental strand, 34903577 - 34903527
Alignment:
Q  604 ggttcgaacctcgaaccttacatatattatgcattgttcttaccaactgaa 654  Q
    ||||||||||||  ||||| ||||||||||||| ||| |||||||||||||    
T  34903577 ggttcgaacctcagaccttgcatatattatgcactgtccttaccaactgaa 34903527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 604 - 653
Target Start/End: Original strand, 35456821 - 35456871
Alignment:
Q  604 ggttcgaacctcgaaccttacatatatta-tgcattgttcttaccaactga 653  Q
    |||| ||||| |||||||| ||||||||| |||||||||||||||||||||    
T  35456821 ggtttgaaccccgaaccttgcatatattaatgcattgttcttaccaactga 35456871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 603 - 653
Target Start/End: Original strand, 40967371 - 40967421
Alignment:
Q  603 aggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    ||||| ||||||| |||||| ||||||||||||||||| |||| |||||||    
T  40967371 aggtttgaacctcaaaccttgcatatattatgcattgtccttatcaactga 40967421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 616 - 653
Target Start/End: Original strand, 145024 - 145061
Alignment:
Q  616 gaaccttacatatattatgcattgttcttaccaactga 653  Q
    ||||||||||||||||||||||||| | ||||||||||    
T  145024 gaaccttacatatattatgcattgtccataccaactga 145061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 593 - 638
Target Start/End: Complemental strand, 2264868 - 2264823
Alignment:
Q  593 gtggtgtctaaggttcgaacctcgaaccttacatatattatgcatt 638  Q
    |||||||| | |||||||||| | ||||||||||||||||||||||    
T  2264868 gtggtgtccagggttcgaaccccaaaccttacatatattatgcatt 2264823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 618 - 651
Target Start/End: Original strand, 6579296 - 6579329
Alignment:
Q  618 accttacatatattatgcattgttcttaccaact 651  Q
    ||||| ||||||||||||||||||||||||||||    
T  6579296 accttgcatatattatgcattgttcttaccaact 6579329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 604 - 653
Target Start/End: Complemental strand, 6765670 - 6765621
Alignment:
Q  604 ggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||||||||| || ||||||||||| ||||||||||| | ||||||||||    
T  6765670 ggttcgaaccccggaccttacatattttatgcattgtccataccaactga 6765621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 620 - 653
Target Start/End: Complemental strand, 20644048 - 20644015
Alignment:
Q  620 cttacatatattatgcattgttcttaccaactga 653  Q
    ||||||||||||||||||| ||||||||||||||    
T  20644048 cttacatatattatgcattattcttaccaactga 20644015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 604 - 653
Target Start/End: Complemental strand, 24393305 - 24393256
Alignment:
Q  604 ggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    ||||||||||||  ||||| ||||||||||||||||| |||| |||||||    
T  24393305 ggttcgaacctcagaccttgcatatattatgcattgtccttaacaactga 24393256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 604 - 641
Target Start/End: Original strand, 24581018 - 24581055
Alignment:
Q  604 ggttcgaacctcgaaccttacatatattatgcattgtt 641  Q
    |||| |||||||||||||| ||||||||||||||||||    
T  24581018 ggtttgaacctcgaaccttgcatatattatgcattgtt 24581055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 604 - 653
Target Start/End: Complemental strand, 27935116 - 27935067
Alignment:
Q  604 ggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    ||||||||||||| ||||| |||||||| |||||||| | ||||||||||    
T  27935116 ggttcgaacctcgtaccttgcatatattctgcattgtccctaccaactga 27935067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 604 - 653
Target Start/End: Complemental strand, 28771642 - 28771593
Alignment:
Q  604 ggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||||||||| || | ||| ||||||||||||||||| ||||||||||||    
T  28771642 ggttcgaaccgcggatcttgcatatattatgcattgtccttaccaactga 28771593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 617 - 650
Target Start/End: Original strand, 32957557 - 32957590
Alignment:
Q  617 aaccttacatatattatgcattgttcttaccaac 650  Q
    |||||||||||||||||||||||||| |||||||    
T  32957557 aaccttacatatattatgcattgttcataccaac 32957590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 604 - 653
Target Start/End: Original strand, 43117191 - 43117240
Alignment:
Q  604 ggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||| |||||||  ||||| ||||||||||||||||| ||||||||||||    
T  43117191 ggtttgaacctcagaccttgcatatattatgcattgtccttaccaactga 43117240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 1e-16; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 604 - 653
Target Start/End: Complemental strand, 21016022 - 21015973
Alignment:
Q  604 ggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||    
T  21016022 ggttcgaaccccgaaccttacatatattatgcattgttcttaccaactga 21015973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 606 - 654
Target Start/End: Complemental strand, 9413856 - 9413808
Alignment:
Q  606 ttcgaacctcgaaccttacatatattatgcattgttcttaccaactgaa 654  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  9413856 ttcgaaccccgaaccttacatatattatgcattgttcttaccaactgaa 9413808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 593 - 653
Target Start/End: Complemental strand, 30795772 - 30795712
Alignment:
Q  593 gtggtgtctaaggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    ||||||| |||||||||||||| | ||||| ||||||||||||||||||||||||||||||    
T  30795772 gtggtgtttaaggttcgaaccttggaccttgcatatattatgcattgttcttaccaactga 30795712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 755 - 883
Target Start/End: Complemental strand, 43542259 - 43542131
Alignment:
Q  755 tctggtaatgaacagtcttgccaacgactagcaccaacgacaacatcttcattatctctcaccacaacaccaatatcccatttatcactctctatcgaat 854  Q
    |||||||||||| ||  |||||||  ||||||||||||||||||| |||||||||||||||| ||||  | |||| |||| |||||||  ||||||| |     
T  43542259 tctggtaatgaaaagatttgccaaaaactagcaccaacgacaacaccttcattatctctcacaacaatcctaataccccacttatcaccttctatcggac 43542160  T
Q  855 ctgctacgtcaacattaagcttaaagaaa 883  Q
     |||| | |||||||| |||||| |||||    
T  43542159 ttgctgcatcaacattcagcttatagaaa 43542131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 593 - 653
Target Start/End: Original strand, 27023646 - 27023705
Alignment:
Q  593 gtggtgtctaaggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    ||||||||| ||||| ||||| |||||||| ||||||||||||||||||||||||||||||    
T  27023646 gtggtgtctgaggtttgaacc-cgaaccttgcatatattatgcattgttcttaccaactga 27023705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 604 - 651
Target Start/End: Original strand, 17221521 - 17221568
Alignment:
Q  604 ggttcgaacctcgaaccttacatatattatgcattgttcttaccaact 651  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  17221521 ggttcgaacctcggaccttgcatatattatgcattgttcttaccaact 17221568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 604 - 653
Target Start/End: Complemental strand, 34083397 - 34083348
Alignment:
Q  604 ggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||||||||| | |||||||||||||||||||||||||||||||| ||||    
T  34083397 ggttcgaaccccaaaccttacatatattatgcattgttcttaccatctga 34083348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 593 - 653
Target Start/End: Original strand, 10132434 - 10132494
Alignment:
Q  593 gtggtgtctaaggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||||||| |||||||||||| |  ||||| ||||||||||||||||| ||||||||||||    
T  10132434 gtggtgtccaaggttcgaaccccagaccttgcatatattatgcattgtccttaccaactga 10132494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 618 - 654
Target Start/End: Original strand, 25271778 - 25271814
Alignment:
Q  618 accttacatatattatgcattgttcttaccaactgaa 654  Q
    |||||||||||||||||||||||||||||||||||||    
T  25271778 accttacatatattatgcattgttcttaccaactgaa 25271814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 781 - 913
Target Start/End: Complemental strand, 31438587 - 31438456
Alignment:
Q  781 actagcaccaacgacaacatcttcattatctctcaccacaacaccaatatcccatttatcactctctatcgaatctgctacgtcaacattaagcttaaag 880  Q
    ||||||| ||||||||||| |||| |||||||||||  ||||||||||| | |||||| | | |||| ||| |  |||| | |||||||| | |||| ||    
T  31438587 actagcagcaacgacaacaccttcgttatctctcactgcaacaccaatacctcatttacccccctctgtcggacatgctgcatcaacatttaacttatag 31438488  T
Q  881 aaatcactaaacagaggtgtccaatgaacatca 913  Q
     || ||||  |||||||||||||||||||||||    
T  31438487 caaccact-gacagaggtgtccaatgaacatca 31438456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 601 - 653
Target Start/End: Complemental strand, 35442918 - 35442866
Alignment:
Q  601 taaggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||||||||||||||| |||||  |||||||||||||||||| ||||||||||    
T  35442918 taaggttcgaacctcggaccttgaatatattatgcattgttcataccaactga 35442866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 607 - 654
Target Start/End: Original strand, 32826709 - 32826756
Alignment:
Q  607 tcgaacctcgaaccttacatatattatgcattgttcttaccaactgaa 654  Q
    |||||||| ||||||||||||||||||||||| || ||||||||||||    
T  32826709 tcgaaccttgaaccttacatatattatgcattatttttaccaactgaa 32826756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 606 - 653
Target Start/End: Original strand, 34808566 - 34808613
Alignment:
Q  606 ttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    ||||||||||||||||| ||||||||||||||||| |||| |||||||    
T  34808566 ttcgaacctcgaaccttgcatatattatgcattgtccttaacaactga 34808613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 604 - 653
Target Start/End: Complemental strand, 2613782 - 2613733
Alignment:
Q  604 ggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||||||||| |||||||||||||| ||||||||||| | ||||||||||    
T  2613782 ggttcgaaccccgaaccttacatattttatgcattgtccataccaactga 2613733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 604 - 653
Target Start/End: Original strand, 9398414 - 9398463
Alignment:
Q  604 ggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||||||||| |  ||||||||||||| ||||||||||||||||||||||    
T  9398414 ggttcgaaccccagaccttacatatatcatgcattgttcttaccaactga 9398463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 604 - 653
Target Start/End: Original strand, 33153881 - 33153930
Alignment:
Q  604 ggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||| |||||||| ||||||||||||||||||||||| | ||||||||||    
T  33153881 ggtttgaacctcggaccttacatatattatgcattgtccctaccaactga 33153930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 597 - 638
Target Start/End: Original strand, 45652113 - 45652154
Alignment:
Q  597 tgtctaaggttcgaacctcgaaccttacatatattatgcatt 638  Q
    ||||| |||||||||||||| |||||||||||||||||||||    
T  45652113 tgtctgaggttcgaacctcggaccttacatatattatgcatt 45652154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 604 - 653
Target Start/End: Original strand, 47528448 - 47528497
Alignment:
Q  604 ggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    ||||||||||||| ||||| | ||||||||||||||| ||||||||||||    
T  47528448 ggttcgaacctcggaccttgcgtatattatgcattgtccttaccaactga 47528497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 609 - 653
Target Start/End: Original strand, 2817379 - 2817423
Alignment:
Q  609 gaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||| ||| ||||||||||||||||||||||| ||||||||||||    
T  2817379 gaacttcggaccttacatatattatgcattgtccttaccaactga 2817423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 617 - 653
Target Start/End: Original strand, 3573338 - 3573374
Alignment:
Q  617 aaccttacatatattatgcattgttcttaccaactga 653  Q
    |||||||||||||||||||||||||| ||||||||||    
T  3573338 aaccttacatatattatgcattgttcctaccaactga 3573374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 594 - 654
Target Start/End: Complemental strand, 7652171 - 7652111
Alignment:
Q  594 tggtgtctaaggttcgaacctcgaaccttacatatattatgcattgttcttaccaactgaa 654  Q
    |||||||| |||||||||| ||  ||||||||||||||||| ||||| | |||||||||||    
T  7652171 tggtgtctgaggttcgaacttcagaccttacatatattatgtattgtccataccaactgaa 7652111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 593 - 653
Target Start/End: Complemental strand, 17284022 - 17283962
Alignment:
Q  593 gtggtgtctaaggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||||||| | ||||||||||  | ||||| ||||||||||||||||| ||||||||||||    
T  17284022 gtggtgtccagggttcgaaccctggaccttgcatatattatgcattgtccttaccaactga 17283962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 615 - 651
Target Start/End: Complemental strand, 22821105 - 22821069
Alignment:
Q  615 cgaaccttacatatattatgcattgttcttaccaact 651  Q
    |||||||| ||||||||||||||||||||||||||||    
T  22821105 cgaaccttgcatatattatgcattgttcttaccaact 22821069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 593 - 653
Target Start/End: Original strand, 37045136 - 37045196
Alignment:
Q  593 gtggtgtctaaggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||||||||  ||||||||||  | ||||| ||||||||||||||||||| ||||||||||    
T  37045136 gtggtgtctggggttcgaaccctggaccttgcatatattatgcattgttcctaccaactga 37045196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 606 - 653
Target Start/End: Complemental strand, 1408493 - 1408446
Alignment:
Q  606 ttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    ||||||| |||||| || ||||||||||||||||| ||||||||||||    
T  1408493 ttcgaacttcgaactttgcatatattatgcattgtccttaccaactga 1408446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 610 - 653
Target Start/End: Original strand, 24124837 - 24124880
Alignment:
Q  610 aacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    ||||||||||||| ||||||||||||||||| |||| |||||||    
T  24124837 aacctcgaaccttgcatatattatgcattgtccttaacaactga 24124880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 605 - 652
Target Start/End: Original strand, 25942654 - 25942701
Alignment:
Q  605 gttcgaacctcgaaccttacatatattatgcattgttcttaccaactg 652  Q
    ||||||||| ||||||||| |||| ||||||||||||| |||||||||    
T  25942654 gttcgaaccccgaaccttatatattttatgcattgttcataccaactg 25942701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 604 - 651
Target Start/End: Complemental strand, 30561783 - 30561736
Alignment:
Q  604 ggttcgaacctcgaaccttacatatattatgcattgttcttaccaact 651  Q
    |||||||||||   ||||| ||||||||||||||||||||||||||||    
T  30561783 ggttcgaaccttagaccttgcatatattatgcattgttcttaccaact 30561736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 606 - 653
Target Start/End: Original strand, 32874392 - 32874439
Alignment:
Q  606 ttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||||||| ||||| |||||||||||||||||||  ||||||||||||    
T  32874392 ttcgaaccccgaactttacatatattatgcattgcccttaccaactga 32874439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 606 - 653
Target Start/End: Original strand, 38448869 - 38448916
Alignment:
Q  606 ttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||||||| || ||||| ||||||||||||||||| ||||||||||||    
T  38448869 ttcgaaccccggaccttgcatatattatgcattgtccttaccaactga 38448916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 618 - 653
Target Start/End: Complemental strand, 41926868 - 41926833
Alignment:
Q  618 accttacatatattatgcattgttcttaccaactga 653  Q
    ||||||||||||||||||||||| ||||||||||||    
T  41926868 accttacatatattatgcattgtccttaccaactga 41926833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 615 - 646
Target Start/End: Complemental strand, 42860156 - 42860125
Alignment:
Q  615 cgaaccttacatatattatgcattgttcttac 646  Q
    ||||||||||||||||||||||||||||||||    
T  42860156 cgaaccttacatatattatgcattgttcttac 42860125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 618 - 653
Target Start/End: Complemental strand, 44243919 - 44243884
Alignment:
Q  618 accttacatatattatgcattgttcttaccaactga 653  Q
    ||||||||||||||||||||||||| ||||||||||    
T  44243919 accttacatatattatgcattgttcctaccaactga 44243884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 606 - 652
Target Start/End: Complemental strand, 12500981 - 12500935
Alignment:
Q  606 ttcgaacctcgaaccttacatatattatgcattgttcttaccaactg 652  Q
    |||||||| ||||| || ||||||||||||||||| |||||||||||    
T  12500981 ttcgaaccccgaactttgcatatattatgcattgtccttaccaactg 12500935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 760 - 830
Target Start/End: Original strand, 15262439 - 15262509
Alignment:
Q  760 taatgaacagtcttgccaacgactagcaccaacgacaacatcttcattatctctcaccacaacaccaatat 830  Q
    ||||||| || ||||| | | |||| || |||| |||||| ||||||||||||||||| ||||||||||||    
T  15262439 taatgaaaagacttgcaagcaactaacagcaacaacaacaccttcattatctctcaccgcaacaccaatat 15262509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 605 - 655
Target Start/End: Complemental strand, 45481552 - 45481502
Alignment:
Q  605 gttcgaacctcgaaccttacatatattatgcattgttcttaccaactgaat 655  Q
    ||||||||| || ||||| ||||||||||||||||| |||||||| |||||    
T  45481552 gttcgaaccccggaccttgcatatattatgcattgtccttaccaaatgaat 45481502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 615 - 653
Target Start/End: Original strand, 48681945 - 48681983
Alignment:
Q  615 cgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||||||| ||||||||||||||||||| ||||||||||    
T  48681945 cgaaccttgcatatattatgcattgttcataccaactga 48681983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 615 - 653
Target Start/End: Original strand, 50849085 - 50849123
Alignment:
Q  615 cgaaccttacatatattatgcattgttcttaccaactga 653  Q
    ||||||||||||||||||||||||||  |||||||||||    
T  50849085 cgaaccttacatatattatgcattgtcattaccaactga 50849123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 604 - 653
Target Start/End: Original strand, 6000144 - 6000193
Alignment:
Q  604 ggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||| |||||||| ||||| ||||||||||||||||| || |||||||||    
T  6000144 ggtttgaacctcggaccttgcatatattatgcattgtcctaaccaactga 6000193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 623 - 652
Target Start/End: Original strand, 6519900 - 6519929
Alignment:
Q  623 acatatattatgcattgttcttaccaactg 652  Q
    ||||||||||||||||||||||||||||||    
T  6519900 acatatattatgcattgttcttaccaactg 6519929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 604 - 653
Target Start/End: Original strand, 9872106 - 9872155
Alignment:
Q  604 ggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||||||||| | |||||| ||||||||||||||| | ||||||||||||    
T  9872106 ggttcgaaccgcaaaccttgcatatattatgcattatccttaccaactga 9872155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 604 - 653
Target Start/End: Original strand, 12268985 - 12269034
Alignment:
Q  604 ggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||| ||||| || ||||| ||||||||||||||||||| ||||||||||    
T  12268985 ggtttgaaccccggaccttgcatatattatgcattgttcctaccaactga 12269034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 604 - 653
Target Start/End: Original strand, 13615613 - 13615662
Alignment:
Q  604 ggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    ||||||||||| | ||||| ||| ||||||||||||| ||||||||||||    
T  13615613 ggttcgaaccttggaccttgcatgtattatgcattgtccttaccaactga 13615662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 604 - 653
Target Start/End: Original strand, 18056717 - 18056766
Alignment:
Q  604 ggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    ||||||||||||  || || ||||||||||||||||| ||||||||||||    
T  18056717 ggttcgaacctcacacattgcatatattatgcattgtccttaccaactga 18056766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 618 - 651
Target Start/End: Original strand, 22946565 - 22946598
Alignment:
Q  618 accttacatatattatgcattgttcttaccaact 651  Q
    ||||| ||||||||||||||||||||||||||||    
T  22946565 accttgcatatattatgcattgttcttaccaact 22946598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 624 - 653
Target Start/End: Original strand, 25365017 - 25365046
Alignment:
Q  624 catatattatgcattgttcttaccaactga 653  Q
    ||||||||||||||||||||||||||||||    
T  25365017 catatattatgcattgttcttaccaactga 25365046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 604 - 653
Target Start/End: Original strand, 26329123 - 26329172
Alignment:
Q  604 ggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||||||||  |||||||| ||| |||||||||||||||||| |||||||    
T  26329123 ggttcgaactccgaaccttgcatgtattatgcattgttcttatcaactga 26329172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 604 - 653
Target Start/End: Complemental strand, 27533303 - 27533254
Alignment:
Q  604 ggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||| ||||| |||||||| ||||||||||||||||| | ||||||||||    
T  27533303 ggtttgaaccccgaaccttgcatatattatgcattgtccctaccaactga 27533254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 604 - 653
Target Start/End: Original strand, 28039861 - 28039910
Alignment:
Q  604 ggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    ||||| ||||||  ||||| ||||||||||||||||| ||||||||||||    
T  28039861 ggttcaaacctcagaccttgcatatattatgcattgtccttaccaactga 28039910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 616 - 653
Target Start/End: Original strand, 30678826 - 30678863
Alignment:
Q  616 gaaccttacatatattatgcattgttcttaccaactga 653  Q
    ||||||||||||||||||||||||| | ||||||||||    
T  30678826 gaaccttacatatattatgcattgtccctaccaactga 30678863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 614 - 651
Target Start/End: Complemental strand, 43843941 - 43843904
Alignment:
Q  614 tcgaaccttacatatattatgcattgttcttaccaact 651  Q
    ||||||||| ||||||||||||||||| ||||||||||    
T  43843941 tcgaaccttgcatatattatgcattgtccttaccaact 43843904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 593 - 654
Target Start/End: Original strand, 45190259 - 45190320
Alignment:
Q  593 gtggtgtctaaggttcgaacctcgaaccttacatatattatgcattgttcttaccaactgaa 654  Q
    |||||| ||| |||| ||| | |||||||| ||||||||||||||||| | |||||||||||    
T  45190259 gtggtggctagggtttgaatcccgaaccttgcatatattatgcattgtccataccaactgaa 45190320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.000000000002; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 604 - 654
Target Start/End: Complemental strand, 15062351 - 15062301
Alignment:
Q  604 ggttcgaacctcgaaccttacatatattatgcattgttcttaccaactgaa 654  Q
    |||||||||| |||||||||||||| ||||||||||| |||||||||||||    
T  15062351 ggttcgaaccccgaaccttacatattttatgcattgtacttaccaactgaa 15062301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 609 - 650
Target Start/End: Complemental strand, 2105960 - 2105919
Alignment:
Q  609 gaacctcgaaccttacatatattatgcattgttcttaccaac 650  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  2105960 gaacctcgaaccttacatatattatgcattgtttttaccaac 2105919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 609 - 653
Target Start/End: Original strand, 32193865 - 32193909
Alignment:
Q  609 gaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||||||| ||||| ||||||||||||||||||||||||||||||    
T  32193865 gaacctcgtaccttgcatatattatgcattgttcttaccaactga 32193909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 593 - 651
Target Start/End: Complemental strand, 404234 - 404176
Alignment:
Q  593 gtggtgtctaaggttcgaacctcgaaccttacatatattatgcattgttcttaccaact 651  Q
    |||||||||  ||||||||||||| || || ||||||||||||||||| ||||||||||    
T  404234 gtggtgtctggggttcgaacctcggacattgcatatattatgcattgtccttaccaact 404176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 604 - 654
Target Start/End: Complemental strand, 9111107 - 9111057
Alignment:
Q  604 ggttcgaacctcgaaccttacatatattatgcattgttcttaccaactgaa 654  Q
    |||||||||| || ||||| ||||||||||||||||||| |||||||||||    
T  9111107 ggttcgaaccccggaccttgcatatattatgcattgttcataccaactgaa 9111057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 604 - 653
Target Start/End: Complemental strand, 15169991 - 15169942
Alignment:
Q  604 ggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||| ||||| |||||||||||||||||||||||||| ||||||| ||||    
T  15169991 ggtttgaaccccgaaccttacatatattatgcattgtacttaccagctga 15169942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 604 - 653
Target Start/End: Complemental strand, 15178763 - 15178714
Alignment:
Q  604 ggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||| ||||| |||||||||||||||||||||||||| ||||||| ||||    
T  15178763 ggtttgaaccccgaaccttacatatattatgcattgtacttaccagctga 15178714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 604 - 653
Target Start/End: Complemental strand, 31971589 - 31971540
Alignment:
Q  604 ggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||| |||||||| ||||| ||||||||||||||||| ||||||||||||    
T  31971589 ggtttgaacctcggaccttgcatatattatgcattgtccttaccaactga 31971540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 605 - 653
Target Start/End: Original strand, 6196533 - 6196581
Alignment:
Q  605 gttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    ||||||||| ||| || ||||||||||||||||||| ||||||||||||    
T  6196533 gttcgaaccccgacccctacatatattatgcattgtccttaccaactga 6196581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 593 - 653
Target Start/End: Original strand, 9333970 - 9334030
Alignment:
Q  593 gtggtgtctaaggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    ||||||||  ||||||||||| | |||||||||||||||||||||||| |||  |||||||    
T  9333970 gtggtgtccgaggttcgaaccccaaaccttacatatattatgcattgtccttgtcaactga 9334030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 593 - 653
Target Start/End: Complemental strand, 10118988 - 10118928
Alignment:
Q  593 gtggtgtctaaggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||||||||  ||||||||||  ||| ||| ||||||||||| ||||||||||||||||||    
T  10118988 gtggtgtctggggttcgaaccatgaatcttgcatatattatgtattgttcttaccaactga 10118928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 609 - 653
Target Start/End: Original strand, 24438288 - 24438332
Alignment:
Q  609 gaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    ||||| ||||| |||||||||||||||||| ||||||||||||||    
T  24438288 gaaccccgaactttacatatattatgcattattcttaccaactga 24438332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 609 - 640
Target Start/End: Complemental strand, 4826345 - 4826314
Alignment:
Q  609 gaacctcgaaccttacatatattatgcattgt 640  Q
    ||||||||||||||||||||||||||||||||    
T  4826345 gaacctcgaaccttacatatattatgcattgt 4826314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 618 - 653
Target Start/End: Original strand, 8138473 - 8138508
Alignment:
Q  618 accttacatatattatgcattgttcttaccaactga 653  Q
    |||||||||||||||||||||||||||| |||||||    
T  8138473 accttacatatattatgcattgttcttatcaactga 8138508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 606 - 653
Target Start/End: Original strand, 10497155 - 10497202
Alignment:
Q  606 ttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||||||| | |||||||||||||||||||||||| ||||| ||||||    
T  10497155 ttcgaaccgcaaaccttacatatattatgcattgtccttacaaactga 10497202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 606 - 653
Target Start/End: Original strand, 12276234 - 12276281
Alignment:
Q  606 ttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||||| | ||||| || ||||||||||||||||||||||||||||||    
T  12276234 ttcgaatcccgaactttgcatatattatgcattgttcttaccaactga 12276281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 593 - 653
Target Start/End: Complemental strand, 13655234 - 13655172
Alignment:
Q  593 gtggtgtctaaggttcgaacctcgaaccttacatatat--tatgcattgttcttaccaactga 653  Q
    |||||||| | ||||||||||||| || ||||||||||  |||||||||| ||||||||||||    
T  13655234 gtggtgtccagggttcgaacctcggactttacatatatattatgcattgtccttaccaactga 13655172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 606 - 653
Target Start/End: Complemental strand, 26587450 - 26587403
Alignment:
Q  606 ttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    ||||||||  ||||||| ||||||||||||||||||||||| ||||||    
T  26587450 ttcgaacccagaaccttgcatatattatgcattgttcttactaactga 26587403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 618 - 653
Target Start/End: Complemental strand, 32149184 - 32149149
Alignment:
Q  618 accttacatatattatgcattgttcttaccaactga 653  Q
    ||||| ||||||||||||||||||||||||||||||    
T  32149184 accttgcatatattatgcattgttcttaccaactga 32149149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 615 - 653
Target Start/End: Complemental strand, 788915 - 788877
Alignment:
Q  615 cgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||||||| ||||||||||||||||| ||||||||||||    
T  788915 cgaaccttgcatatattatgcattgtccttaccaactga 788877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 603 - 653
Target Start/End: Original strand, 1989043 - 1989092
Alignment:
Q  603 aggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    ||||| ||||||| ||||||||||||||||||||||| || ||||||||||    
T  1989043 aggtttgaacctcaaaccttacatatattatgcattg-tcataccaactga 1989092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 604 - 654
Target Start/End: Original strand, 8637438 - 8637488
Alignment:
Q  604 ggttcgaacctcgaaccttacatatattatgcattgttcttaccaactgaa 654  Q
    |||| |||||||| ||||| ||||||||||||||||| | |||||||||||    
T  8637438 ggtttgaacctcggaccttgcatatattatgcattgtccctaccaactgaa 8637488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 605 - 651
Target Start/End: Original strand, 15291692 - 15291738
Alignment:
Q  605 gttcgaacctcgaaccttacatatattatgcattgttcttaccaact 651  Q
    ||||||||||| |||||| |||||||||| |||||| ||||||||||    
T  15291692 gttcgaacctcaaaccttgcatatattattcattgtccttaccaact 15291738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 603 - 653
Target Start/End: Complemental strand, 16390490 - 16390440
Alignment:
Q  603 aggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    ||||| ||||| || ||||||||||||||||||||||| | ||||||||||    
T  16390490 aggtttgaaccccggaccttacatatattatgcattgtccctaccaactga 16390440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 603 - 653
Target Start/End: Complemental strand, 19277635 - 19277585
Alignment:
Q  603 aggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||||||||||  ||||||||| ||||||||||||||||| || |||||||    
T  19277635 aggttcgaaccctgaaccttacctatattatgcattgttcctatcaactga 19277585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 604 - 654
Target Start/End: Original strand, 23507392 - 23507442
Alignment:
Q  604 ggttcgaacctcgaaccttacatatattatgcattgttcttaccaactgaa 654  Q
    |||||||||| | |||||||||||| ||||| ||||| |||||||||||||    
T  23507392 ggttcgaaccccaaaccttacatattttatgtattgtccttaccaactgaa 23507442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 615 - 653
Target Start/End: Original strand, 33938691 - 33938729
Alignment:
Q  615 cgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||||||| ||||||||||||||||||| ||||||||||    
T  33938691 cgaaccttgcatatattatgcattgttcataccaactga 33938729  T

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Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 604 - 638
Target Start/End: Complemental strand, 35110114 - 35110080
Alignment:
Q  604 ggttcgaacctcgaaccttacatatattatgcatt 638  Q
    |||||||||||| ||||||||||||||||||||||    
T  35110114 ggttcgaacctcaaaccttacatatattatgcatt 35110080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 604 - 653
Target Start/End: Original strand, 2726418 - 2726467
Alignment:
Q  604 ggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||||||||| || ||||| ||||||||||||||||| | ||||||||||    
T  2726418 ggttcgaaccccggaccttgcatatattatgcattgtccataccaactga 2726467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 612 - 653
Target Start/End: Original strand, 10320440 - 10320481
Alignment:
Q  612 cctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||||||||||| |||||| || |||||||||||||||||||    
T  10320440 cctcgaaccttatatatatgatacattgttcttaccaactga 10320481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 616 - 653
Target Start/End: Complemental strand, 12319293 - 12319256
Alignment:
Q  616 gaaccttacatatattatgcattgttcttaccaactga 653  Q
    ||||||||| ||||||||||||||| ||||||||||||    
T  12319293 gaaccttacctatattatgcattgtccttaccaactga 12319256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 604 - 653
Target Start/End: Complemental strand, 12329336 - 12329287
Alignment:
Q  604 ggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    ||||||||||| ||||||||||||| ||||| ||||||| || |||||||    
T  12329336 ggttcgaacctggaaccttacatattttatgtattgttcataacaactga 12329287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 604 - 653
Target Start/End: Original strand, 17829309 - 17829358
Alignment:
Q  604 ggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    ||||||||||||| || || |||||||||||||| || ||||||||||||    
T  17829309 ggttcgaacctcggactttgcatatattatgcatagtccttaccaactga 17829358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 604 - 653
Target Start/End: Original strand, 24623318 - 24623367
Alignment:
Q  604 ggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||| ||||| |||||||||||||||||||||||||| | || |||||||    
T  24623318 ggtttgaaccccgaaccttacatatattatgcattgtccatatcaactga 24623367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 604 - 653
Target Start/End: Original strand, 28758291 - 28758340
Alignment:
Q  604 ggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||| |||||||| || || ||||||||||||||||||||||||| ||||    
T  28758291 ggtttgaacctcggactttgcatatattatgcattgttcttaccagctga 28758340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 616 - 653
Target Start/End: Complemental strand, 28951447 - 28951410
Alignment:
Q  616 gaaccttacatatattatgcattgttcttaccaactga 653  Q
    ||||||| ||||||||||||||||||| ||||||||||    
T  28951447 gaaccttgcatatattatgcattgttcataccaactga 28951410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 609 - 654
Target Start/End: Complemental strand, 34701202 - 34701157
Alignment:
Q  609 gaacctcgaaccttacatatattatgcattgttcttaccaactgaa 654  Q
    |||||||  ||||| ||||||||||||||||||| |||||||||||    
T  34701202 gaacctcagaccttgcatatattatgcattgttcctaccaactgaa 34701157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 793 - 829
Target Start/End: Original strand, 44869 - 44905
Alignment:
Q  793 gacaacatcttcattatctctcaccacaacaccaata 829  Q
    |||||||||||||||||||||||||||||||||||||    
T  44869 gacaacatcttcattatctctcaccacaacaccaata 44905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 33; Significance: 0.000000006; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 593 - 653
Target Start/End: Complemental strand, 25460 - 25400
Alignment:
Q  593 gtggtgtctaaggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||||||||  ||||||||||  | ||||| ||||||||||||||||| ||||||||||||    
T  25460 gtggtgtctggggttcgaaccctggaccttgcatatattatgcattgtccttaccaactga 25400  T

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Target: scaffold0204 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 606 - 645
Target Start/End: Complemental strand, 16209 - 16170
Alignment:
Q  606 ttcgaacctcgaaccttacatatattatgcattgttctta 645  Q
    |||||||||||||| |||||||||||||||||||| ||||    
T  16209 ttcgaacctcgaactttacatatattatgcattgtcctta 16170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 606 - 653
Target Start/End: Complemental strand, 75383 - 75336
Alignment:
Q  606 ttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||||||| || ||||| ||||||||||||||||| ||||||||||||    
T  75383 ttcgaaccccggaccttgcatatattatgcattgtccttaccaactga 75336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1120 (Bit Score: 31; Significance: 0.00000009; HSPs: 1)
Name: scaffold1120
Description:

Target: scaffold1120; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 604 - 650
Target Start/End: Complemental strand, 1973 - 1927
Alignment:
Q  604 ggttcgaacctcgaaccttacatatattatgcattgttcttaccaac 650  Q
    |||| ||||| |||||||| ||||||||||||||||||| |||||||    
T  1973 ggtttgaaccacgaaccttgcatatattatgcattgttcctaccaac 1927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 31; Significance: 0.00000009; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 603 - 653
Target Start/End: Complemental strand, 40059 - 40009
Alignment:
Q  603 aggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    ||||| ||||||| |||||| ||||||||||||||||| | ||||||||||    
T  40059 aggtttgaacctctaaccttgcatatattatgcattgtccataccaactga 40009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 31; Significance: 0.00000009; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 612 - 650
Target Start/End: Original strand, 119963 - 120001
Alignment:
Q  612 cctcgaaccttacatatattatgcattgttcttaccaac 650  Q
    ||||||||||| ||||||||||||||||| |||||||||    
T  119963 cctcgaaccttgcatatattatgcattgtccttaccaac 120001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 31; Significance: 0.00000009; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 612 - 650
Target Start/End: Original strand, 210087 - 210125
Alignment:
Q  612 cctcgaaccttacatatattatgcattgttcttaccaac 650  Q
    ||||||||||| ||||||||||||||||| |||||||||    
T  210087 cctcgaaccttgcatatattatgcattgtccttaccaac 210125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1160 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold1160
Description:

Target: scaffold1160; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 604 - 653
Target Start/End: Original strand, 1713 - 1762
Alignment:
Q  604 ggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    ||||| ||||||||||||| ||||| ||||||||||| | ||||||||||    
T  1713 ggttcaaacctcgaaccttgcatattttatgcattgtccctaccaactga 1762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 604 - 649
Target Start/End: Original strand, 3350 - 3395
Alignment:
Q  604 ggttcgaacctcgaaccttacatatattatgcattgttcttaccaa 649  Q
    |||||||| |||| ||||||||| ||||||||||||| ||||||||    
T  3350 ggttcgaatctcggaccttacatctattatgcattgtccttaccaa 3395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 604 - 653
Target Start/End: Complemental strand, 46003 - 45954
Alignment:
Q  604 ggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    ||||||||||||| | ||| |||||||||| |||| ||||||||||||||    
T  46003 ggttcgaacctcggatcttgcatatattatacattattcttaccaactga 45954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 624 - 653
Target Start/End: Complemental strand, 25735 - 25706
Alignment:
Q  624 catatattatgcattgttcttaccaactga 653  Q
    ||||||||||||||||||||||||||||||    
T  25735 catatattatgcattgttcttaccaactga 25706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 593 - 653
Target Start/End: Original strand, 75989 - 76051
Alignment:
Q  593 gtggtgtctaaggttcgaacctcgaaccttacatatatt---atgcattgttcttaccaactga 653  Q
    ||||||||| || ||||||||| ||||||||||||||||   ||||||||| ||||||||||||    
T  75989 gtggtgtctgagattcgaacct-gaaccttacatatattattatgcattgtccttaccaactga 76051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 604 - 653
Target Start/End: Complemental strand, 204650 - 204601
Alignment:
Q  604 ggttcgaacctcgaaccttacatatattatgcattgttcttaccaactga 653  Q
    |||| ||||| |||||||||||||| ||||||||||||| | ||||||||    
T  204650 ggtttgaaccccgaaccttacatattttatgcattgttcatgccaactga 204601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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