View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11718_low_22 (Length: 474)

Name: NF11718_low_22
Description: NF11718
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11718_low_22
NF11718_low_22
[»] chr6 (21 HSPs)
chr6 (18-457)||(14771201-14771642)
chr6 (410-457)||(2890715-2890762)
chr6 (410-457)||(17730985-17731032)
chr6 (410-457)||(2891170-2891217)
chr6 (410-457)||(7912101-7912148)
chr6 (410-457)||(13492556-13492603)
chr6 (410-457)||(17027407-17027454)
chr6 (410-457)||(20126058-20126105)
chr6 (410-457)||(20850544-20850591)
chr6 (410-457)||(23776663-23776710)
chr6 (410-457)||(27334316-27334363)
chr6 (410-457)||(27395056-27395103)
chr6 (410-450)||(21312468-21312508)
chr6 (410-457)||(3653121-3653168)
chr6 (410-457)||(6331244-6331291)
chr6 (410-457)||(9352285-9352332)
chr6 (410-457)||(21311738-21311785)
chr6 (410-457)||(21312194-21312241)
chr6 (416-457)||(13493013-13493054)
chr6 (410-450)||(3652753-3652793)
chr6 (410-454)||(23986193-23986237)
[»] scaffold0333 (3 HSPs)
scaffold0333 (410-457)||(4783-4830)
scaffold0333 (410-457)||(5243-5290)
scaffold0333 (410-457)||(5346-5393)
[»] chr4 (27 HSPs)
chr4 (410-457)||(23943112-23943159)
chr4 (402-457)||(53995992-53996047)
chr4 (410-457)||(4127288-4127335)
chr4 (410-457)||(4414257-4414304)
chr4 (410-457)||(7381490-7381537)
chr4 (410-457)||(7678492-7678539)
chr4 (410-457)||(15268043-15268090)
chr4 (410-457)||(35477883-35477930)
chr4 (410-457)||(44470745-44470792)
chr4 (410-457)||(44471195-44471242)
chr4 (417-457)||(1645626-1645666)
chr4 (410-450)||(50399334-50399374)
chr4 (402-457)||(3169429-3169484)
chr4 (426-457)||(4127775-4127806)
chr4 (410-457)||(23350153-23350200)
chr4 (410-457)||(24629306-24629353)
chr4 (410-457)||(33294762-33294809)
chr4 (426-457)||(35871850-35871881)
chr4 (426-457)||(49998859-49998890)
chr4 (410-457)||(50398864-50398911)
chr4 (415-457)||(14571563-14571605)
chr4 (403-457)||(33987012-33987066)
chr4 (424-457)||(27578170-27578203)
chr4 (417-457)||(8467690-8467730)
chr4 (425-457)||(9423743-9423775)
chr4 (426-458)||(13265858-13265890)
chr4 (410-458)||(13266308-13266356)
[»] chr3 (28 HSPs)
chr3 (410-457)||(25239003-25239050)
chr3 (410-457)||(37045255-37045302)
chr3 (410-457)||(11179910-11179957)
chr3 (410-457)||(13149975-13150022)
chr3 (410-457)||(39653387-39653434)
chr3 (410-457)||(50347969-50348016)
chr3 (410-464)||(25230581-25230635)
chr3 (410-464)||(25238168-25238222)
chr3 (416-457)||(20884999-20885040)
chr3 (410-457)||(13150430-13150477)
chr3 (410-457)||(14820377-14820424)
chr3 (410-457)||(27187205-27187252)
chr3 (410-457)||(32227723-32227770)
chr3 (415-457)||(28561968-28562010)
chr3 (409-457)||(14814172-14814220)
chr3 (425-457)||(25230988-25231020)
chr3 (425-457)||(25238575-25238607)
chr3 (410-457)||(2911307-2911354)
chr3 (410-457)||(4067236-4067283)
chr3 (426-457)||(8067503-8067534)
chr3 (410-457)||(25230124-25230171)
chr3 (410-457)||(25237711-25237758)
chr3 (410-457)||(25802424-25802471)
chr3 (410-457)||(31284152-31284199)
chr3 (410-457)||(32227097-32227144)
chr3 (410-457)||(32386610-32386657)
chr3 (410-457)||(41473764-41473811)
chr3 (410-452)||(16811607-16811649)
[»] chr2 (19 HSPs)
chr2 (410-457)||(16379160-16379207)
chr2 (410-457)||(1912747-1912794)
chr2 (410-457)||(16379616-16379663)
chr2 (402-457)||(20502187-20502242)
chr2 (410-457)||(24818548-24818595)
chr2 (410-457)||(25337873-25337920)
chr2 (410-457)||(8181238-8181284)
chr2 (410-457)||(25433932-25433979)
chr2 (410-457)||(30966913-30966960)
chr2 (410-457)||(32377783-32377830)
chr2 (410-456)||(29804871-29804917)
chr2 (415-457)||(36924362-36924404)
chr2 (410-457)||(5399693-5399740)
chr2 (410-457)||(13191197-13191244)
chr2 (410-457)||(15639957-15640004)
chr2 (410-457)||(30966457-30966504)
chr2 (410-457)||(32377592-32377639)
chr2 (410-457)||(33175179-33175226)
chr2 (412-457)||(37552788-37552833)
[»] scaffold0557 (1 HSPs)
scaffold0557 (410-458)||(2318-2366)
[»] scaffold0243 (1 HSPs)
scaffold0243 (410-457)||(1443-1490)
[»] scaffold0022 (3 HSPs)
scaffold0022 (410-457)||(163294-163341)
scaffold0022 (426-457)||(163026-163057)
scaffold0022 (410-457)||(162553-162601)
[»] scaffold0018 (1 HSPs)
scaffold0018 (410-457)||(10522-10569)
[»] scaffold0002 (2 HSPs)
scaffold0002 (410-457)||(154980-155027)
scaffold0002 (410-457)||(154525-154572)
[»] chr8 (25 HSPs)
chr8 (410-457)||(8080218-8080265)
chr8 (410-457)||(10844491-10844538)
chr8 (410-457)||(12100913-12100960)
chr8 (410-457)||(17103305-17103352)
chr8 (406-457)||(22840421-22840472)
chr8 (410-457)||(25148189-25148236)
chr8 (410-457)||(27926121-27926168)
chr8 (410-457)||(32292164-32292211)
chr8 (410-457)||(21315986-21316033)
chr8 (410-457)||(22548425-22548472)
chr8 (410-457)||(27022215-27022262)
chr8 (410-457)||(30527358-30527405)
chr8 (410-457)||(41658981-41659028)
chr8 (416-457)||(2044281-2044322)
chr8 (416-457)||(34308817-34308858)
chr8 (410-457)||(6463419-6463467)
chr8 (425-457)||(32292620-32292652)
chr8 (410-457)||(22026603-22026650)
chr8 (410-457)||(22548871-22548918)
chr8 (426-457)||(25147759-25147790)
chr8 (410-457)||(31283528-31283575)
chr8 (410-457)||(34308355-34308402)
chr8 (402-457)||(41913193-41913248)
chr8 (426-466)||(3744852-3744892)
chr8 (410-446)||(12827130-12827166)
[»] chr7 (26 HSPs)
chr7 (410-457)||(2611535-2611582)
chr7 (410-457)||(6747952-6747999)
chr7 (410-457)||(7646354-7646401)
chr7 (410-457)||(29038896-29038943)
chr7 (410-457)||(36422474-36422521)
chr7 (410-457)||(42515315-42515362)
chr7 (410-457)||(2466147-2466193)
chr7 (410-457)||(22529111-22529158)
chr7 (410-457)||(28496077-28496124)
chr7 (410-453)||(31743765-31743808)
chr7 (410-457)||(42515767-42515814)
chr7 (410-457)||(43233180-43233227)
chr7 (426-458)||(2941649-2941681)
chr7 (410-457)||(680040-680086)
chr7 (410-457)||(2193479-2193526)
chr7 (402-457)||(3305216-3305271)
chr7 (410-457)||(7646638-7646685)
chr7 (410-457)||(9125182-9125229)
chr7 (426-457)||(13122396-13122427)
chr7 (410-457)||(13125011-13125058)
chr7 (410-457)||(26419111-26419158)
chr7 (410-457)||(28495495-28495542)
chr7 (410-457)||(34405467-34405514)
chr7 (410-457)||(36422605-36422652)
chr7 (426-457)||(43776182-43776213)
chr7 (419-457)||(11372666-11372704)
[»] chr5 (22 HSPs)
chr5 (410-457)||(10927279-10927326)
chr5 (410-457)||(17445331-17445378)
chr5 (410-457)||(21883961-21884008)
chr5 (410-457)||(29679983-29680030)
chr5 (410-457)||(42788522-42788569)
chr5 (410-457)||(22556759-22556807)
chr5 (410-457)||(22557192-22557240)
chr5 (410-457)||(1822129-1822176)
chr5 (410-457)||(1880299-1880346)
chr5 (410-457)||(2194027-2194074)
chr5 (410-457)||(2474172-2474219)
chr5 (410-457)||(2474628-2474675)
chr5 (410-457)||(3886477-3886524)
chr5 (410-457)||(8641911-8641958)
chr5 (410-457)||(30720136-30720183)
chr5 (409-457)||(8366688-8366735)
chr5 (426-457)||(189291-189322)
chr5 (410-457)||(3886933-3886980)
chr5 (402-457)||(18750064-18750119)
chr5 (426-457)||(30684903-30684934)
chr5 (410-457)||(34371835-34371882)
chr5 (428-457)||(187781-187810)
[»] chr1 (22 HSPs)
chr1 (410-457)||(50002583-50002630)
chr1 (410-457)||(52250429-52250476)
chr1 (410-457)||(52250766-52250813)
chr1 (410-457)||(52251103-52251150)
chr1 (410-457)||(16451809-16451856)
chr1 (410-457)||(16460962-16461009)
chr1 (410-457)||(20053956-20054003)
chr1 (410-457)||(20054412-20054459)
chr1 (410-457)||(20054868-20054915)
chr1 (410-457)||(20055324-20055371)
chr1 (410-457)||(20055780-20055827)
chr1 (410-457)||(20056236-20056283)
chr1 (410-457)||(20056692-20056739)
chr1 (410-457)||(20057139-20057186)
chr1 (410-457)||(20057595-20057642)
chr1 (410-457)||(20845537-20845584)
chr1 (410-457)||(35759940-35759987)
chr1 (410-457)||(46693611-46693658)
chr1 (416-457)||(50002957-50002998)
chr1 (410-457)||(7547860-7547907)
chr1 (410-457)||(28181369-28181416)
chr1 (410-457)||(35759484-35759531)
[»] scaffold0499 (1 HSPs)
scaffold0499 (410-457)||(1927-1974)
[»] scaffold0389 (1 HSPs)
scaffold0389 (410-457)||(13409-13456)
[»] scaffold0322 (1 HSPs)
scaffold0322 (410-457)||(19189-19236)
[»] scaffold0217 (1 HSPs)
scaffold0217 (410-457)||(533-580)
[»] scaffold0024 (1 HSPs)
scaffold0024 (410-457)||(105943-105990)
[»] scaffold0047 (2 HSPs)
scaffold0047 (403-457)||(17467-17521)
scaffold0047 (410-455)||(18011-18056)
[»] scaffold0442 (1 HSPs)
scaffold0442 (417-454)||(1-38)
[»] scaffold1519 (1 HSPs)
scaffold1519 (414-457)||(1581-1624)
[»] scaffold0277 (1 HSPs)
scaffold0277 (410-457)||(14578-14625)
[»] scaffold0168 (1 HSPs)
scaffold0168 (410-457)||(2965-3012)
[»] scaffold0065 (1 HSPs)
scaffold0065 (410-457)||(62983-63030)
[»] scaffold0040 (1 HSPs)
scaffold0040 (410-457)||(2086-2133)
[»] scaffold0126 (1 HSPs)
scaffold0126 (403-457)||(37182-37236)
[»] scaffold0020 (1 HSPs)
scaffold0020 (415-457)||(107344-107386)
[»] scaffold0005 (1 HSPs)
scaffold0005 (415-457)||(245771-245813)


Alignment Details
Target: chr6 (Bit Score: 362; Significance: 0; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 362; E-Value: 0
Query Start/End: Original strand, 18 - 457
Target Start/End: Original strand, 14771201 - 14771642
Alignment:
Q  18 gtttgaaaataacactattgtacaagatttttaatttttaatattttgaactctcgattttaaatggattatgaaaaatgttaactttgtgtaaatttca 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||   ||||||    
T  14771201 gtttgaaaataacactattgtacaagatttttaatttttaatattttgaactctcgattttaaatgaattatgaaaaatgttaactttgtgggtatttca 14771300  T
Q  118 gggaaaagttagagattccacgtgataaaccttacatcatactaaaaggagcaggaaagaggaaaaccattgttgaatgggatgatcatgcaccaatctc 217  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14771301 gggaaaagatagagattccacgtgataaaccttacatcatactaaagggagcaggaaagaggaaaaccattgttgaatgggatgatcatgcaccaatctc 14771400  T
Q  218 acaaagtgctacattttcctcaatggctgataatgttgtcgtcaaatccatcagtttcagggtgagaaataatctaccaattactaattgttttcaatta 317  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  14771401 acaaagtgctacattttcctcaatggctgataatgttgtcgtcaaatccatcagtttcagggtgagaaataatctaccaattactaattgttttcattta 14771500  T
Q  318 gagtgtct--nnnnnnntttcatttcatttatgccttttcttatgatgactattagctgcttagatgtttatgtgtgactatgcgtctttaaatattgtc 415  Q
    ||||||||         ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||    
T  14771501 gagtgtctaagaaaaattttcatttcatttatgccttttcttatgatgactattagctgcttagatgtttatgtgtgactatgtatctttaaacattgtc 14771600  T
Q  416 gactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    ||||||||||||||||||||| ||||||| ||||||||||||    
T  14771601 gactgactctacaaaccaacatgagtcttatcagcgtgtttt 14771642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 410 - 457
Target Start/End: Original strand, 2890715 - 2890762
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  2890715 attgtcgactgaccctacaaaccaacacgagtctttttagcgtgtttt 2890762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 410 - 457
Target Start/End: Original strand, 17730985 - 17731032
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  17730985 attgtcgactgaccctacaaaccaacacgagtctttttagcgtgtttt 17731032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 410 - 457
Target Start/End: Original strand, 2891170 - 2891217
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    |||| |||||||| |||||||||||||||| |||||||||||||||||    
T  2891170 attgccgactgaccctacaaaccaacacgaatcttttcagcgtgtttt 2891217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 410 - 457
Target Start/End: Complemental strand, 7912148 - 7912101
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    ||||||||||||| | |||||||||||| |||||||||||||||||||    
T  7912148 attgtcgactgaccccacaaaccaacacaagtcttttcagcgtgtttt 7912101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 410 - 457
Target Start/End: Complemental strand, 13492603 - 13492556
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    |||| |||||||| | ||||||||||||||||||||||||||||||||    
T  13492603 attgccgactgaccccacaaaccaacacgagtcttttcagcgtgtttt 13492556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 410 - 457
Target Start/End: Original strand, 17027407 - 17027454
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    |||| |||||||| | ||||||||||||||||||||||||||||||||    
T  17027407 attgccgactgaccccacaaaccaacacgagtcttttcagcgtgtttt 17027454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 410 - 457
Target Start/End: Original strand, 20126058 - 20126105
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    ||||||||| ||| |||||||||||||||||||||||||| |||||||    
T  20126058 attgtcgacggaccctacaaaccaacacgagtcttttcagtgtgtttt 20126105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 410 - 457
Target Start/End: Complemental strand, 20850591 - 20850544
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    |||| |||||||| | ||||||||||||||||||||||||||||||||    
T  20850591 attgccgactgaccccacaaaccaacacgagtcttttcagcgtgtttt 20850544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 410 - 457
Target Start/End: Complemental strand, 23776710 - 23776663
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    |||| |||||||||| |||||||||||||| |||||||||||||||||    
T  23776710 attgccgactgactccacaaaccaacacgaatcttttcagcgtgtttt 23776663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 410 - 457
Target Start/End: Complemental strand, 27334363 - 27334316
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    ||||||||||||| | ||||| ||||||||||||||||||||||||||    
T  27334363 attgtcgactgaccccacaaatcaacacgagtcttttcagcgtgtttt 27334316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 410 - 457
Target Start/End: Complemental strand, 27395103 - 27395056
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    ||||||||||||| | ||||| ||||||||||||||||||||||||||    
T  27395103 attgtcgactgaccccacaaatcaacacgagtcttttcagcgtgtttt 27395056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 410 - 450
Target Start/End: Complemental strand, 21312508 - 21312468
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagc 450  Q
    ||||||||||||| |||||||||||||| ||||||||||||    
T  21312508 attgtcgactgaccctacaaaccaacaccagtcttttcagc 21312468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 410 - 457
Target Start/End: Complemental strand, 3653168 - 3653121
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    |||| ||| |||| ||||||||||| ||||||||||||||||||||||    
T  3653168 attgccgattgaccctacaaaccaatacgagtcttttcagcgtgtttt 3653121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 410 - 457
Target Start/End: Original strand, 6331244 - 6331291
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    |||| |||||||| |||||||||||||||||||||| |||| ||||||    
T  6331244 attgccgactgaccctacaaaccaacacgagtctttccagcatgtttt 6331291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 410 - 457
Target Start/End: Complemental strand, 9352332 - 9352285
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    |||| |||||||| | ||||||||||||||||||||||||| ||||||    
T  9352332 attgccgactgaccccacaaaccaacacgagtcttttcagcatgtttt 9352285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 410 - 457
Target Start/End: Complemental strand, 21311785 - 21311738
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    |||||||| |||| ||||||||||||||||||| || |||||||||||    
T  21311785 attgtcgattgaccctacaaaccaacacgagtccttacagcgtgtttt 21311738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 410 - 457
Target Start/End: Complemental strand, 21312241 - 21312194
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    ||||||||||||| |||||||||||||| ||||||||||  |||||||    
T  21312241 attgtcgactgaccctacaaaccaacaccagtcttttcaatgtgtttt 21312194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 457
Target Start/End: Complemental strand, 13493054 - 13493013
Alignment:
Q  416 gactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    ||||||| ||||||| ||||||||||||||||||| ||||||    
T  13493054 gactgaccctacaaatcaacacgagtcttttcagcatgtttt 13493013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 410 - 450
Target Start/End: Complemental strand, 3652793 - 3652753
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagc 450  Q
    |||||| |||||| ||||||||||||| |||||||||||||    
T  3652793 attgtcaactgaccctacaaaccaacaagagtcttttcagc 3652753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 410 - 454
Target Start/End: Original strand, 23986193 - 23986237
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgt 454  Q
    |||| |||||||| | |||||||||||| ||||||||||||||||    
T  23986193 attgccgactgaccccacaaaccaacacaagtcttttcagcgtgt 23986237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 44; Significance: 7e-16; HSPs: 3)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 410 - 457
Target Start/End: Complemental strand, 4830 - 4783
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  4830 attgtcgactgaccctacaaaccaacacgagtcttttcagcgtgtttt 4783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 410 - 457
Target Start/End: Complemental strand, 5290 - 5243
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  5290 attgtcgactgaccctacaaaccaacacgagtcttttcagcgtgtttt 5243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 410 - 457
Target Start/End: Complemental strand, 5393 - 5346
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    |||||||||| || ||||||||||||||||||||||||||||||||||    
T  5393 attgtcgacttaccctacaaaccaacacgagtcttttcagcgtgtttt 5346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 44; Significance: 7e-16; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 410 - 457
Target Start/End: Original strand, 23943112 - 23943159
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  23943112 attgtcgactgaccctacaaaccaacacgagtcttttcagcgtgtttt 23943159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 402 - 457
Target Start/End: Original strand, 53995992 - 53996047
Alignment:
Q  402 ctttaaatattgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    ||||||| |||||| |||||| ||||||||||||||||||||||||| ||||||||    
T  53995992 ctttaaacattgtccactgaccctacaaaccaacacgagtcttttcaacgtgtttt 53996047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 410 - 457
Target Start/End: Original strand, 4127288 - 4127335
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    |||| |||||||| | ||||||||||||||||||||||||||||||||    
T  4127288 attgccgactgaccccacaaaccaacacgagtcttttcagcgtgtttt 4127335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 410 - 457
Target Start/End: Original strand, 4414257 - 4414304
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    |||| |||||||| |||||||||||||||||||||||||| |||||||    
T  4414257 attgccgactgaccctacaaaccaacacgagtcttttcagtgtgtttt 4414304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 410 - 457
Target Start/End: Complemental strand, 7381537 - 7381490
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    |||| |||||||| ||||||||||||||| ||||||||||||||||||    
T  7381537 attgccgactgaccctacaaaccaacacgggtcttttcagcgtgtttt 7381490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 410 - 457
Target Start/End: Original strand, 7678492 - 7678539
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    ||||||||||||| | ||||||| ||||||||||||||||||||||||    
T  7678492 attgtcgactgaccccacaaacctacacgagtcttttcagcgtgtttt 7678539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 410 - 457
Target Start/End: Original strand, 15268043 - 15268090
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    |||| |||||||| | ||||||||||||||||||||||||||||||||    
T  15268043 attgccgactgaccccacaaaccaacacgagtcttttcagcgtgtttt 15268090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 410 - 457
Target Start/End: Complemental strand, 35477930 - 35477883
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    |||| |||||||| | ||||||||||||||||||||||||||||||||    
T  35477930 attgccgactgaccccacaaaccaacacgagtcttttcagcgtgtttt 35477883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 410 - 457
Target Start/End: Original strand, 44470745 - 44470792
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    ||||| ||||||| |||||||||||||||||||||| |||||||||||    
T  44470745 attgttgactgaccctacaaaccaacacgagtctttccagcgtgtttt 44470792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 410 - 457
Target Start/End: Original strand, 44471195 - 44471242
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    ||||||||||||| |||||||||||||||||||||| |||| ||||||    
T  44471195 attgtcgactgaccctacaaaccaacacgagtctttccagcatgtttt 44471242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 417 - 457
Target Start/End: Original strand, 1645626 - 1645666
Alignment:
Q  417 actgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    |||||| ||||||||||||||||||||||||| ||||||||    
T  1645626 actgaccctacaaaccaacacgagtcttttcaacgtgtttt 1645666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 410 - 450
Target Start/End: Complemental strand, 50399374 - 50399334
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagc 450  Q
    |||| |||||||| |||||||||||||||||||||||||||    
T  50399374 attgccgactgaccctacaaaccaacacgagtcttttcagc 50399334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 402 - 457
Target Start/End: Complemental strand, 3169484 - 3169429
Alignment:
Q  402 ctttaaatattgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    |||||| ||||| | |||||| |||||||||||||||||| |||||| ||||||||    
T  3169484 ctttaagtattgccaactgaccctacaaaccaacacgagtattttcaacgtgtttt 3169429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 426 - 457
Target Start/End: Original strand, 4127775 - 4127806
Alignment:
Q  426 acaaaccaacacgagtcttttcagcgtgtttt 457  Q
    ||||||||||||||||||||||||||||||||    
T  4127775 acaaaccaacacgagtcttttcagcgtgtttt 4127806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 410 - 457
Target Start/End: Original strand, 23350153 - 23350200
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    |||| |||||||| | |||||||||||||||||||||||| |||||||    
T  23350153 attgccgactgaccccacaaaccaacacgagtcttttcagtgtgtttt 23350200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 410 - 457
Target Start/End: Original strand, 24629306 - 24629353
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    |||| |||||||| | |||||| |||||||||||||||||||||||||    
T  24629306 attgccgactgaccccacaaactaacacgagtcttttcagcgtgtttt 24629353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 410 - 457
Target Start/End: Original strand, 33294762 - 33294809
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    ||||| || |||| |||||| |||||||||||||||||||||||||||    
T  33294762 attgtagattgacgctacaacccaacacgagtcttttcagcgtgtttt 33294809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 426 - 457
Target Start/End: Complemental strand, 35871881 - 35871850
Alignment:
Q  426 acaaaccaacacgagtcttttcagcgtgtttt 457  Q
    ||||||||||||||||||||||||||||||||    
T  35871881 acaaaccaacacgagtcttttcagcgtgtttt 35871850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 426 - 457
Target Start/End: Complemental strand, 49998890 - 49998859
Alignment:
Q  426 acaaaccaacacgagtcttttcagcgtgtttt 457  Q
    ||||||||||||||||||||||||||||||||    
T  49998890 acaaaccaacacgagtcttttcagcgtgtttt 49998859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 410 - 457
Target Start/End: Original strand, 50398864 - 50398911
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    |||| |||||||| |||||||||||||||||||||| || ||||||||    
T  50398864 attgccgactgaccctacaaaccaacacgagtctttccaacgtgtttt 50398911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 415 - 457
Target Start/End: Original strand, 14571563 - 14571605
Alignment:
Q  415 cgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    |||||||| | ||||||||||||||||||||||| ||||||||    
T  14571563 cgactgaccccacaaaccaacacgagtcttttcaacgtgtttt 14571605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 403 - 457
Target Start/End: Original strand, 33987012 - 33987066
Alignment:
Q  403 tttaaatattgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    ||||| ||||||||||||| || |||||||||||| |||  ||||||||||||||    
T  33987012 tttaagtattgtcgactgattccacaaaccaacacaagttctttcagcgtgtttt 33987066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 424 - 457
Target Start/End: Original strand, 27578170 - 27578203
Alignment:
Q  424 ctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    |||||| |||||||||||||||||||||||||||    
T  27578170 ctacaacccaacacgagtcttttcagcgtgtttt 27578203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 417 - 457
Target Start/End: Original strand, 8467690 - 8467730
Alignment:
Q  417 actgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    |||||| | ||||||||||||||||||||||| ||||||||    
T  8467690 actgaccccacaaaccaacacgagtcttttcaacgtgtttt 8467730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 425 - 457
Target Start/End: Original strand, 9423743 - 9423775
Alignment:
Q  425 tacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    |||| ||||||||||||||||||||||||||||    
T  9423743 tacacaccaacacgagtcttttcagcgtgtttt 9423775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 426 - 458
Target Start/End: Complemental strand, 13265890 - 13265858
Alignment:
Q  426 acaaaccaacacgagtcttttcagcgtgttttc 458  Q
    |||||| ||||||||||||||||||||||||||    
T  13265890 acaaactaacacgagtcttttcagcgtgttttc 13265858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 410 - 458
Target Start/End: Complemental strand, 13266356 - 13266308
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgttttc 458  Q
    ||||||||||||| | |||||||||||| |||||||||| | |||||||    
T  13266356 attgtcgactgaccccacaaaccaacacaagtcttttcaacatgttttc 13266308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 7e-16; HSPs: 28)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 410 - 457
Target Start/End: Original strand, 25239003 - 25239050
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  25239003 attgtcgactgaccctacaaaccaacacgagtcttttcagcgtgtttt 25239050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 410 - 457
Target Start/End: Complemental strand, 37045302 - 37045255
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  37045302 attgtcgactgaccctacaaaccaacacgagtcttttcagcgtgtttt 37045255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 410 - 457
Target Start/End: Original strand, 11179910 - 11179957
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||||    
T  11179910 attgtcgactgaccccacaaaccaacacgagtcttttcagcgtgtttt 11179957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 410 - 457
Target Start/End: Original strand, 13149975 - 13150022
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||||    
T  13149975 attgtcgactgaccccacaaaccaacacgagtcttttcagcgtgtttt 13150022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 410 - 457
Target Start/End: Complemental strand, 39653434 - 39653387
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||||    
T  39653434 attgtcgactgaccccacaaaccaacacgagtcttttcagcgtgtttt 39653387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 410 - 457
Target Start/End: Complemental strand, 50348016 - 50347969
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||||    
T  50348016 attgtcgactgaccccacaaaccaacacgagtcttttcagcgtgtttt 50347969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 410 - 464
Target Start/End: Original strand, 25230581 - 25230635
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgttttcatctca 464  Q
    ||||| ||||||| |||||||||||||||||||||| ||||||||||| ||||||    
T  25230581 attgtagactgaccctacaaaccaacacgagtctttccagcgtgttttgatctca 25230635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 410 - 464
Target Start/End: Original strand, 25238168 - 25238222
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgttttcatctca 464  Q
    ||||| ||||||| |||||||||||||||||||||| ||||||||||| ||||||    
T  25238168 attgtagactgaccctacaaaccaacacgagtctttccagcgtgttttgatctca 25238222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 416 - 457
Target Start/End: Original strand, 20884999 - 20885040
Alignment:
Q  416 gactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    ||||||| ||||||||||||||||||||||||||||||||||    
T  20884999 gactgaccctacaaaccaacacgagtcttttcagcgtgtttt 20885040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 410 - 457
Target Start/End: Original strand, 13150430 - 13150477
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    ||||||||||||| | ||||| ||||||||||||||||||||||||||    
T  13150430 attgtcgactgaccccacaaatcaacacgagtcttttcagcgtgtttt 13150477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 410 - 457
Target Start/End: Complemental strand, 14820424 - 14820377
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    |||| |||||||| | ||||||||||||||||||||||||||||||||    
T  14820424 attgccgactgaccccacaaaccaacacgagtcttttcagcgtgtttt 14820377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 410 - 457
Target Start/End: Original strand, 27187205 - 27187252
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    |||| |||||||| | ||||||||||||||||||||||||||||||||    
T  27187205 attgccgactgaccccacaaaccaacacgagtcttttcagcgtgtttt 27187252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 410 - 457
Target Start/End: Complemental strand, 32227770 - 32227723
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    ||||||||||||| |||||||||||||||||||||||||  |||||||    
T  32227770 attgtcgactgaccctacaaaccaacacgagtcttttcaatgtgtttt 32227723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 415 - 457
Target Start/End: Complemental strand, 28562010 - 28561968
Alignment:
Q  415 cgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    |||||||| | ||||||||||||||||||||||||||||||||    
T  28562010 cgactgaccccacaaaccaacacgagtcttttcagcgtgtttt 28561968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 409 - 457
Target Start/End: Complemental strand, 14814220 - 14814172
Alignment:
Q  409 tattgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    ||||| ||||| || | ||||||||||||||||||||||||||||||||    
T  14814220 tattgccgactaaccccacaaaccaacacgagtcttttcagcgtgtttt 14814172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 425 - 457
Target Start/End: Original strand, 25230988 - 25231020
Alignment:
Q  425 tacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    |||||||||||||||||||||||||||||||||    
T  25230988 tacaaaccaacacgagtcttttcagcgtgtttt 25231020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 425 - 457
Target Start/End: Original strand, 25238575 - 25238607
Alignment:
Q  425 tacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    |||||||||||||||||||||||||||||||||    
T  25238575 tacaaaccaacacgagtcttttcagcgtgtttt 25238607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 410 - 457
Target Start/End: Complemental strand, 2911354 - 2911307
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    |||||||| |||  ||||||||||||||||||||||||| ||||||||    
T  2911354 attgtcgattgatcctacaaaccaacacgagtcttttcaacgtgtttt 2911307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 410 - 457
Target Start/End: Original strand, 4067236 - 4067283
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    |||| |||||||| ||||||||||||||  ||||||||||||||||||    
T  4067236 attgccgactgaccctacaaaccaacactggtcttttcagcgtgtttt 4067283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 426 - 457
Target Start/End: Complemental strand, 8067534 - 8067503
Alignment:
Q  426 acaaaccaacacgagtcttttcagcgtgtttt 457  Q
    ||||||||||||||||||||||||||||||||    
T  8067534 acaaaccaacacgagtcttttcagcgtgtttt 8067503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 410 - 457
Target Start/End: Original strand, 25230124 - 25230171
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    ||||||||||||| |||||||||||||| ||||||| || ||||||||    
T  25230124 attgtcgactgaccctacaaaccaacactagtctttccaacgtgtttt 25230171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 410 - 457
Target Start/End: Original strand, 25237711 - 25237758
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    ||||||||||||| |||||||||||||| ||||||| || ||||||||    
T  25237711 attgtcgactgaccctacaaaccaacactagtctttccaacgtgtttt 25237758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 410 - 457
Target Start/End: Original strand, 25802424 - 25802471
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    ||||| ||||||| ||||||||||||||  ||||||||||||||||||    
T  25802424 attgttgactgaccctacaaaccaacacacgtcttttcagcgtgtttt 25802471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 410 - 457
Target Start/End: Original strand, 31284152 - 31284199
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    |||| |||||||| | |||||||||||||||||||||| |||||||||    
T  31284152 attgccgactgaccccacaaaccaacacgagtcttttcggcgtgtttt 31284199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 410 - 457
Target Start/End: Original strand, 32227097 - 32227144
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    ||||||||||||| | |||||||||||||||||||||||  |||||||    
T  32227097 attgtcgactgaccccacaaaccaacacgagtcttttcaatgtgtttt 32227144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 410 - 457
Target Start/End: Original strand, 32386610 - 32386657
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    |||| |||||||| | ||||||||||||||||||||| ||||||||||    
T  32386610 attgccgactgaccccacaaaccaacacgagtctttttagcgtgtttt 32386657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 410 - 457
Target Start/End: Complemental strand, 41473811 - 41473764
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    |||| |||||||| | ||||||||||||| ||||||||||||||||||    
T  41473811 attggcgactgaccccacaaaccaacacgggtcttttcagcgtgtttt 41473764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 410 - 452
Target Start/End: Complemental strand, 16811649 - 16811607
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgt 452  Q
    |||| |||||||| | |||||||||||||||||||||||||||    
T  16811649 attgccgactgaccccacaaaccaacacgagtcttttcagcgt 16811607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 7e-16; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 410 - 457
Target Start/End: Complemental strand, 16379207 - 16379160
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  16379207 attgtcgactgaccctacaaaccaacacgagtcttttcagcgtgtttt 16379160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 410 - 457
Target Start/End: Complemental strand, 1912794 - 1912747
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    |||| |||||||||||||||||||||||||||||||||| ||||||||    
T  1912794 attgccgactgactctacaaaccaacacgagtcttttcaacgtgtttt 1912747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 410 - 457
Target Start/End: Complemental strand, 16379663 - 16379616
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    |||||||| |||| ||||||||||||||||||||||||||||||||||    
T  16379663 attgtcgaatgaccctacaaaccaacacgagtcttttcagcgtgtttt 16379616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 402 - 457
Target Start/End: Complemental strand, 20502242 - 20502187
Alignment:
Q  402 ctttaaatattgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    ||||||| |||| |||||||| |||||||| |||||||||||||||||||||||||    
T  20502242 ctttaaaaattgccgactgaccctacaaactaacacgagtcttttcagcgtgtttt 20502187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 410 - 457
Target Start/End: Complemental strand, 24818595 - 24818548
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||||    
T  24818595 attgtcgactgaccccacaaaccaacacgagtcttttcagcgtgtttt 24818548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 410 - 457
Target Start/End: Original strand, 25337873 - 25337920
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||||    
T  25337873 attgtcgactgaccccacaaaccaacacgagtcttttcagcgtgtttt 25337920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 410 - 457
Target Start/End: Original strand, 8181238 - 8181284
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    ||||||||||||| || |||||||||||||||||||||||||||||||    
T  8181238 attgtcgactgac-ctgcaaaccaacacgagtcttttcagcgtgtttt 8181284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 410 - 457
Target Start/End: Original strand, 25433932 - 25433979
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    |||| |||||||| |||||||||||||||| |||||||||||||||||    
T  25433932 attgccgactgaccctacaaaccaacacgaatcttttcagcgtgtttt 25433979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 410 - 457
Target Start/End: Complemental strand, 30966960 - 30966913
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    |||| |||||||||| ||||||||||||||||||||||| ||||||||    
T  30966960 attgccgactgactccacaaaccaacacgagtcttttcaacgtgtttt 30966913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 410 - 457
Target Start/End: Original strand, 32377783 - 32377830
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    |||| |||||||| | ||||||||||||||||||||||||||||||||    
T  32377783 attgccgactgaccccacaaaccaacacgagtcttttcagcgtgtttt 32377830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 410 - 456
Target Start/End: Complemental strand, 29804917 - 29804871
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgttt 456  Q
    ||||||||||||  | |||||||||||||||||||||||||||||||    
T  29804917 attgtcgactgatcccacaaaccaacacgagtcttttcagcgtgttt 29804871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 415 - 457
Target Start/End: Original strand, 36924362 - 36924404
Alignment:
Q  415 cgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    ||||| ||||||||||||||||||||||||| |||||||||||    
T  36924362 cgactaactctacaaaccaacacgagtctttccagcgtgtttt 36924404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 410 - 457
Target Start/End: Original strand, 5399693 - 5399740
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    ||||||||||||| | |||||||||||| ||||||| |||||||||||    
T  5399693 attgtcgactgaccccacaaaccaacacaagtctttccagcgtgtttt 5399740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 410 - 457
Target Start/End: Complemental strand, 13191244 - 13191197
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    ||||||||||||||| | |||||||||| |||||||| ||||||||||    
T  13191244 attgtcgactgactccataaaccaacactagtctttttagcgtgtttt 13191197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 410 - 457
Target Start/End: Complemental strand, 15640004 - 15639957
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    |||| |||||||| |||| ||||||||||||||||||| |||||||||    
T  15640004 attgccgactgaccctaccaaccaacacgagtcttttctgcgtgtttt 15639957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 410 - 457
Target Start/End: Complemental strand, 30966504 - 30966457
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    |||| |||||||| | ||||||||||||||||||||||| ||||||||    
T  30966504 attgccgactgaccccacaaaccaacacgagtcttttcaacgtgtttt 30966457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 410 - 457
Target Start/End: Original strand, 32377592 - 32377639
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    |||| |||||||| | |||||||||||||||| |||||||||||||||    
T  32377592 attgccgactgaccccacaaaccaacacgagttttttcagcgtgtttt 32377639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 410 - 457
Target Start/End: Complemental strand, 33175226 - 33175179
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    |||| |||||||| |||||||| ||||||||||||| |||||||||||    
T  33175226 attgccgactgaccctacaaactaacacgagtctttccagcgtgtttt 33175179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 457
Target Start/End: Complemental strand, 37552833 - 37552788
Alignment:
Q  412 tgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    ||||||||||| ||||||||||||||| || |||| ||||||||||    
T  37552833 tgtcgactgaccctacaaaccaacacgggtattttaagcgtgtttt 37552788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0557 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0557
Description:

Target: scaffold0557; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 410 - 458
Target Start/End: Complemental strand, 2366 - 2318
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgttttc 458  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||||    
T  2366 attgtcgactgatcctacaaaccaacacgagtcttttcagcgtgttttc 2318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 410 - 457
Target Start/End: Complemental strand, 1490 - 1443
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||||    
T  1490 attgtcgactgacgccacaaaccaacacgagtcttttcagcgtgtttt 1443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 3)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 410 - 457
Target Start/End: Complemental strand, 163341 - 163294
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    ||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  163341 attgtcgacagaccctacaaaccaacacgagtcttttcagcgtgtttt 163294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 426 - 457
Target Start/End: Original strand, 163026 - 163057
Alignment:
Q  426 acaaaccaacacgagtcttttcagcgtgtttt 457  Q
    ||||||||||||||||||||||||||||||||    
T  163026 acaaaccaacacgagtcttttcagcgtgtttt 163057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 410 - 457
Target Start/End: Original strand, 162553 - 162601
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtc-ttttcagcgtgtttt 457  Q
    |||| |||||||| | ||||||||||||||||| |||||||||||||||    
T  162553 attgccgactgaccccacaaaccaacacgagtctttttcagcgtgtttt 162601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 410 - 457
Target Start/End: Complemental strand, 10569 - 10522
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||||    
T  10569 attgtcgactgaccccacaaaccaacacgagtcttttcagcgtgtttt 10522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 410 - 457
Target Start/End: Complemental strand, 155027 - 154980
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||||    
T  155027 attgtcgactgaccccacaaaccaacacgagtcttttcagcgtgtttt 154980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 410 - 457
Target Start/End: Complemental strand, 154572 - 154525
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    ||||||||||||| | ||||| ||||||||||||||||||||||||||    
T  154572 attgtcgactgaccccacaaatcaacacgagtcttttcagcgtgtttt 154525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 410 - 457
Target Start/End: Original strand, 8080218 - 8080265
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    ||||||||||| | ||||||||||||||||||||||||||||||||||    
T  8080218 attgtcgactggccctacaaaccaacacgagtcttttcagcgtgtttt 8080265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 410 - 457
Target Start/End: Original strand, 10844491 - 10844538
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    ||||||||||||| |||||||| |||||||||||||||||||||||||    
T  10844491 attgtcgactgaccctacaaacaaacacgagtcttttcagcgtgtttt 10844538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 410 - 457
Target Start/End: Complemental strand, 12100960 - 12100913
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||||    
T  12100960 attgtcgactgaccccacaaaccaacacgagtcttttcagcgtgtttt 12100913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 410 - 457
Target Start/End: Complemental strand, 17103352 - 17103305
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||||    
T  17103352 attgtcgactgaccccacaaaccaacacgagtcttttcagcgtgtttt 17103305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 406 - 457
Target Start/End: Original strand, 22840421 - 22840472
Alignment:
Q  406 aaatattgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    |||||||||||||||||  ||||||||||||||||||||||||| |||||||    
T  22840421 aaatattgtcgactgaccatacaaaccaacacgagtcttttcagtgtgtttt 22840472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 410 - 457
Target Start/End: Complemental strand, 25148236 - 25148189
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||||    
T  25148236 attgtcgactgaccccacaaaccaacacgagtcttttcagcgtgtttt 25148189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 410 - 457
Target Start/End: Complemental strand, 27926168 - 27926121
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  27926168 attgtcgactgaccctacaaaccaacacgagtcttttcagcatgtttt 27926121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 410 - 457
Target Start/End: Complemental strand, 32292211 - 32292164
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||    
T  32292211 attgccgactgaccctacaaaccaacacgagtcttttcagcgtgtttt 32292164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 410 - 457
Target Start/End: Original strand, 21315986 - 21316033
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    |||||||| |||| | ||||||||||||||||||||||||||||||||    
T  21315986 attgtcgattgaccccacaaaccaacacgagtcttttcagcgtgtttt 21316033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 410 - 457
Target Start/End: Original strand, 22548425 - 22548472
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    |||| |||||||| | ||||||||||||||||||||||||||||||||    
T  22548425 attgccgactgaccccacaaaccaacacgagtcttttcagcgtgtttt 22548472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 410 - 457
Target Start/End: Original strand, 27022215 - 27022262
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    ||||||||||||| | ||||||||||||||||||||| ||||||||||    
T  27022215 attgtcgactgaccccacaaaccaacacgagtctttttagcgtgtttt 27022262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 410 - 457
Target Start/End: Original strand, 30527358 - 30527405
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    ||||||||||||  ||||||| ||||||||||||||||||||||||||    
T  30527358 attgtcgactgatcctacaaatcaacacgagtcttttcagcgtgtttt 30527405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 410 - 457
Target Start/End: Original strand, 41658981 - 41659028
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    |||| |||||||| | ||||||||||||||||||||||||||||||||    
T  41658981 attgccgactgaccccacaaaccaacacgagtcttttcagcgtgtttt 41659028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 416 - 457
Target Start/End: Complemental strand, 2044322 - 2044281
Alignment:
Q  416 gactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    ||||||| ||||||||||| ||||||||||||||||||||||    
T  2044322 gactgaccctacaaaccaatacgagtcttttcagcgtgtttt 2044281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 416 - 457
Target Start/End: Original strand, 34308817 - 34308858
Alignment:
Q  416 gactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    ||||||| | ||||||||||||||||||||||||||||||||    
T  34308817 gactgaccccacaaaccaacacgagtcttttcagcgtgtttt 34308858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 410 - 457
Target Start/End: Original strand, 6463419 - 6463467
Alignment:
Q  410 attgtcgactgactctacaaa-ccaacacgagtcttttcagcgtgtttt 457  Q
    ||||||||||||| ||| ||| |||||||||||||||||||||||||||    
T  6463419 attgtcgactgaccctaaaaaaccaacacgagtcttttcagcgtgtttt 6463467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 425 - 457
Target Start/End: Complemental strand, 32292652 - 32292620
Alignment:
Q  425 tacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    |||||||||||||||||||||||||||||||||    
T  32292652 tacaaaccaacacgagtcttttcagcgtgtttt 32292620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 410 - 457
Target Start/End: Complemental strand, 22026650 - 22026603
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    |||| |||||||| | |||||||||||||||||||||||| |||||||    
T  22026650 attgccgactgaccccacaaaccaacacgagtcttttcagtgtgtttt 22026603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 410 - 457
Target Start/End: Original strand, 22548871 - 22548918
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    |||| |||||||| | |||||||||||||||||| |||||||||||||    
T  22548871 attgccgactgaccccacaaaccaacacgagtctgttcagcgtgtttt 22548918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 426 - 457
Target Start/End: Complemental strand, 25147790 - 25147759
Alignment:
Q  426 acaaaccaacacgagtcttttcagcgtgtttt 457  Q
    ||||||||||||||||||||||||||||||||    
T  25147790 acaaaccaacacgagtcttttcagcgtgtttt 25147759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 410 - 457
Target Start/End: Original strand, 31283528 - 31283575
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    ||||||||||||| | ||||||||||||||||||||||| || |||||    
T  31283528 attgtcgactgaccccacaaaccaacacgagtcttttcaacgcgtttt 31283575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 410 - 457
Target Start/End: Original strand, 34308355 - 34308402
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    |||| |||||||| | |||||||| |||||||||||||||||||||||    
T  34308355 attgccgactgaccccacaaaccagcacgagtcttttcagcgtgtttt 34308402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 402 - 457
Target Start/End: Complemental strand, 41913248 - 41913193
Alignment:
Q  402 ctttaaatattgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    ||||||| ||||||||||||| ||| |||| ||||||||| |||||| ||||||||    
T  41913248 ctttaaacattgtcgactgaccctataaactaacacgagttttttcaacgtgtttt 41913193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 426 - 466
Target Start/End: Complemental strand, 3744892 - 3744852
Alignment:
Q  426 acaaaccaacacgagtcttttcagcgtgttttcatctcatt 466  Q
    |||||||||||||||||||||||| |||||||  |||||||    
T  3744892 acaaaccaacacgagtcttttcagtgtgttttgttctcatt 3744852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 410 - 446
Target Start/End: Original strand, 12827130 - 12827166
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtctttt 446  Q
    ||||||||||||| | |||||||||||||||||||||    
T  12827130 attgtcgactgaccccacaaaccaacacgagtctttt 12827166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 410 - 457
Target Start/End: Original strand, 2611535 - 2611582
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    ||||||||||||| |||||||||||||||||||||||||| |||||||    
T  2611535 attgtcgactgaccctacaaaccaacacgagtcttttcagagtgtttt 2611582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 410 - 457
Target Start/End: Original strand, 6747952 - 6747999
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||    
T  6747952 attgccgactgaccctacaaaccaacacgagtcttttcagcgtgtttt 6747999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 410 - 457
Target Start/End: Original strand, 7646354 - 7646401
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||||    
T  7646354 attgtcgactgaccccacaaaccaacacgagtcttttcagcgtgtttt 7646401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 410 - 457
Target Start/End: Original strand, 29038896 - 29038943
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||    
T  29038896 attgccgactgaccctacaaaccaacacgagtcttttcagcgtgtttt 29038943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 410 - 457
Target Start/End: Complemental strand, 36422521 - 36422474
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||||    
T  36422521 attgtcgactgaccccacaaaccaacacgagtcttttcagcgtgtttt 36422474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 410 - 457
Target Start/End: Complemental strand, 42515362 - 42515315
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||    
T  42515362 attgccgactgaccctacaaaccaacacgagtcttttcagcgtgtttt 42515315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 410 - 457
Target Start/End: Complemental strand, 2466193 - 2466147
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    ||||||||||||| |||||||| |||||||||||||||||||||||||    
T  2466193 attgtcgactgac-ctacaaactaacacgagtcttttcagcgtgtttt 2466147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 410 - 457
Target Start/End: Original strand, 22529111 - 22529158
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    ||||||||||||| ||||||||||||| ||||||||||||||| ||||    
T  22529111 attgtcgactgaccctacaaaccaacatgagtcttttcagcgtatttt 22529158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 410 - 457
Target Start/End: Complemental strand, 28496124 - 28496077
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    |||| |||||||| | ||||||||||||||||||||||||||||||||    
T  28496124 attgccgactgaccccacaaaccaacacgagtcttttcagcgtgtttt 28496077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 410 - 453
Target Start/End: Original strand, 31743765 - 31743808
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtg 453  Q
    |||||||||| || ||||||||||||||||||||||||||||||    
T  31743765 attgtcgactaaccctacaaaccaacacgagtcttttcagcgtg 31743808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 410 - 457
Target Start/End: Complemental strand, 42515814 - 42515767
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    |||| |||||||| | ||||||||||||||||||||||||||||||||    
T  42515814 attgccgactgaccccacaaaccaacacgagtcttttcagcgtgtttt 42515767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 410 - 457
Target Start/End: Complemental strand, 43233227 - 43233180
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    |||| |||||||| | ||||||||||||||||||||||||||||||||    
T  43233227 attgccgactgaccccacaaaccaacacgagtcttttcagcgtgtttt 43233180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 426 - 458
Target Start/End: Original strand, 2941649 - 2941681
Alignment:
Q  426 acaaaccaacacgagtcttttcagcgtgttttc 458  Q
    |||||||||||||||||||||||||||||||||    
T  2941649 acaaaccaacacgagtcttttcagcgtgttttc 2941681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 410 - 457
Target Start/End: Complemental strand, 680086 - 680040
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    ||||| ||||||| ||||||||||||| ||||||||||||||||||||    
T  680086 attgtagactgac-ctacaaaccaacatgagtcttttcagcgtgtttt 680040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 410 - 457
Target Start/End: Complemental strand, 2193526 - 2193479
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    |||| |||||||| | ||||| ||||||||||||||||||||||||||    
T  2193526 attgccgactgaccccacaaatcaacacgagtcttttcagcgtgtttt 2193479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 402 - 457
Target Start/End: Original strand, 3305216 - 3305271
Alignment:
Q  402 ctttaaatattgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    |||||| |||||  ||||||  ||||||| ||||||||||||||||||||||||||    
T  3305216 ctttaagtattgctgactgatcctacaaatcaacacgagtcttttcagcgtgtttt 3305271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 410 - 457
Target Start/End: Complemental strand, 7646685 - 7646638
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    |||||||||| || | |||||||||||||||||||||||| |||||||    
T  7646685 attgtcgactaaccccacaaaccaacacgagtcttttcagtgtgtttt 7646638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 410 - 457
Target Start/End: Complemental strand, 9125229 - 9125182
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    |||| |||||||| | ||||||||||||||||||||||||| ||||||    
T  9125229 attgccgactgaccccacaaaccaacacgagtcttttcagcatgtttt 9125182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 426 - 457
Target Start/End: Original strand, 13122396 - 13122427
Alignment:
Q  426 acaaaccaacacgagtcttttcagcgtgtttt 457  Q
    ||||||||||||||||||||||||||||||||    
T  13122396 acaaaccaacacgagtcttttcagcgtgtttt 13122427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 410 - 457
Target Start/End: Original strand, 13125011 - 13125058
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    |||| |||||||| | ||||||||||||||||| ||||||||||||||    
T  13125011 attgccgactgaccccacaaaccaacacgagtcctttcagcgtgtttt 13125058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 410 - 457
Target Start/End: Original strand, 26419111 - 26419158
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    ||||||||||||| | ||||||||||||||||||||||| | ||||||    
T  26419111 attgtcgactgaccccacaaaccaacacgagtcttttcaacatgtttt 26419158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 410 - 457
Target Start/End: Original strand, 28495495 - 28495542
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    |||| |||||||| | |||||||||||||||||||||||||| |||||    
T  28495495 attgccgactgaccccacaaaccaacacgagtcttttcagcgggtttt 28495542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 410 - 457
Target Start/End: Original strand, 34405467 - 34405514
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    ||||||||||||| | ||||| ||||||| ||||||||||||||||||    
T  34405467 attgtcgactgaccccacaaatcaacacgggtcttttcagcgtgtttt 34405514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 410 - 457
Target Start/End: Complemental strand, 36422652 - 36422605
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    ||||||||||||| | ||||| |||||||||||||||||| |||||||    
T  36422652 attgtcgactgaccccacaaatcaacacgagtcttttcagtgtgtttt 36422605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 426 - 457
Target Start/End: Original strand, 43776182 - 43776213
Alignment:
Q  426 acaaaccaacacgagtcttttcagcgtgtttt 457  Q
    ||||||||||||||||||||||||||||||||    
T  43776182 acaaaccaacacgagtcttttcagcgtgtttt 43776213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 419 - 457
Target Start/End: Complemental strand, 11372704 - 11372666
Alignment:
Q  419 tgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    |||| ||||||||||||||||||||||||||| ||||||    
T  11372704 tgaccctacaaaccaacacgagtcttttcagcatgtttt 11372666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 410 - 457
Target Start/End: Original strand, 10927279 - 10927326
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    ||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  10927279 attgtcgaccgaccctacaaaccaacacgagtcttttcagcgtgtttt 10927326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 410 - 457
Target Start/End: Original strand, 17445331 - 17445378
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||||    
T  17445331 attgtcgactgaccccacaaaccaacacgagtcttttcagcgtgtttt 17445378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 410 - 457
Target Start/End: Original strand, 21883961 - 21884008
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||||    
T  21883961 attgtcgactgaccccacaaaccaacacgagtcttttcagcgtgtttt 21884008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 410 - 457
Target Start/End: Original strand, 29679983 - 29680030
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||    
T  29679983 attgccgactgaccctacaaaccaacacgagtcttttcagcgtgtttt 29680030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 410 - 457
Target Start/End: Original strand, 42788522 - 42788569
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    ||||||||||||||| ||||||||||||| ||||||||||||||||||    
T  42788522 attgtcgactgactccacaaaccaacacgggtcttttcagcgtgtttt 42788569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 410 - 457
Target Start/End: Complemental strand, 22556807 - 22556759
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtctttt-cagcgtgtttt 457  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  22556807 attgtcgactgaccctacaaaccaacacgagtcttttacagcgtgtttt 22556759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 410 - 457
Target Start/End: Complemental strand, 22557240 - 22557192
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtctttt-cagcgtgtttt 457  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  22557240 attgtcgactgaccctacaaaccaacacgagtcttttacagcgtgtttt 22557192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 410 - 457
Target Start/End: Complemental strand, 1822176 - 1822129
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    ||||| ||| ||| ||||||||||||||||||||||||||||||||||    
T  1822176 attgttgaccgaccctacaaaccaacacgagtcttttcagcgtgtttt 1822129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 410 - 457
Target Start/End: Complemental strand, 1880346 - 1880299
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    ||||||||| |||  |||||||||||||||||||||||||||||||||    
T  1880346 attgtcgacggaccttacaaaccaacacgagtcttttcagcgtgtttt 1880299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 410 - 457
Target Start/End: Complemental strand, 2194074 - 2194027
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    ||||||||||||| | ||||||||||||| ||||||||||||||||||    
T  2194074 attgtcgactgaccccacaaaccaacacgggtcttttcagcgtgtttt 2194027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 410 - 457
Target Start/End: Complemental strand, 2474219 - 2474172
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    |||| |||||||| | ||||||||||||||||||||||||||||||||    
T  2474219 attgccgactgaccccacaaaccaacacgagtcttttcagcgtgtttt 2474172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 410 - 457
Target Start/End: Complemental strand, 2474675 - 2474628
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    |||| |||||||| | ||||||||||||||||||||||||||||||||    
T  2474675 attgccgactgaccccacaaaccaacacgagtcttttcagcgtgtttt 2474628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 410 - 457
Target Start/End: Original strand, 3886477 - 3886524
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    |||| |||||||| | ||||||||||||||||||||||||||||||||    
T  3886477 attgccgactgaccccacaaaccaacacgagtcttttcagcgtgtttt 3886524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 410 - 457
Target Start/End: Original strand, 8641911 - 8641958
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    |||| |||||||| | ||||||||||||||||||||||||||||||||    
T  8641911 attgccgactgaccccacaaaccaacacgagtcttttcagcgtgtttt 8641958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 410 - 457
Target Start/End: Original strand, 30720136 - 30720183
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    |||||||| |||||| ||||||||||| ||||||||||||||||||||    
T  30720136 attgtcgattgactccacaaaccaacaggagtcttttcagcgtgtttt 30720183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 409 - 457
Target Start/End: Complemental strand, 8366735 - 8366688
Alignment:
Q  409 tattgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    |||| ||||||||| ||||||||||||||||||||||||| ||||||||    
T  8366735 tattatcgactgac-ctacaaaccaacacgagtcttttcaacgtgtttt 8366688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 426 - 457
Target Start/End: Complemental strand, 189322 - 189291
Alignment:
Q  426 acaaaccaacacgagtcttttcagcgtgtttt 457  Q
    ||||||||||||||||||||||||||||||||    
T  189322 acaaaccaacacgagtcttttcagcgtgtttt 189291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 410 - 457
Target Start/End: Original strand, 3886933 - 3886980
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    |||| |||||||| | ||||||||||||||||||| ||||||||||||    
T  3886933 attgccgactgaccccacaaaccaacacgagtcttgtcagcgtgtttt 3886980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 402 - 457
Target Start/End: Original strand, 18750064 - 18750119
Alignment:
Q  402 ctttaaatattgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    |||||| |||||| ||||||| | |||||||||| ||||||||||||| |||||||    
T  18750064 ctttaagtattgttgactgaccccacaaaccaactcgagtcttttcagtgtgtttt 18750119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 426 - 457
Target Start/End: Original strand, 30684903 - 30684934
Alignment:
Q  426 acaaaccaacacgagtcttttcagcgtgtttt 457  Q
    ||||||||||||||||||||||||||||||||    
T  30684903 acaaaccaacacgagtcttttcagcgtgtttt 30684934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 410 - 457
Target Start/End: Complemental strand, 34371882 - 34371835
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    |||| |||||||| | ||||||||||||||||||||||| ||||||||    
T  34371882 attgccgactgaccccacaaaccaacacgagtcttttcaacgtgtttt 34371835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 428 - 457
Target Start/End: Complemental strand, 187810 - 187781
Alignment:
Q  428 aaaccaacacgagtcttttcagcgtgtttt 457  Q
    ||||||||||||||||||||||||||||||    
T  187810 aaaccaacacgagtcttttcagcgtgtttt 187781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 410 - 457
Target Start/End: Original strand, 50002583 - 50002630
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||||    
T  50002583 attgtcgactgaccccacaaaccaacacgagtcttttcagcgtgtttt 50002630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 410 - 457
Target Start/End: Complemental strand, 52250476 - 52250429
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||||    
T  52250476 attgtcgactgaccccacaaaccaacacgagtcttttcagcgtgtttt 52250429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 410 - 457
Target Start/End: Complemental strand, 52250813 - 52250766
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||||    
T  52250813 attgtcgactgaccccacaaaccaacacgagtcttttcagcgtgtttt 52250766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 410 - 457
Target Start/End: Complemental strand, 52251150 - 52251103
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||||    
T  52251150 attgtcgactgaccccacaaaccaacacgagtcttttcagcgtgtttt 52251103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 410 - 457
Target Start/End: Original strand, 16451809 - 16451856
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    |||| |||||||| | ||||||||||||||||||||||||||||||||    
T  16451809 attgccgactgaccccacaaaccaacacgagtcttttcagcgtgtttt 16451856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 410 - 457
Target Start/End: Original strand, 16460962 - 16461009
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    |||| |||||||| | ||||||||||||||||||||||||||||||||    
T  16460962 attgccgactgaccccacaaaccaacacgagtcttttcagcgtgtttt 16461009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 410 - 457
Target Start/End: Original strand, 20053956 - 20054003
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    ||||||||||||| | ||||||||||||||||||||||||| ||||||    
T  20053956 attgtcgactgaccccacaaaccaacacgagtcttttcagcatgtttt 20054003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 410 - 457
Target Start/End: Original strand, 20054412 - 20054459
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    |||| |||||||| | ||||||||||||||||||||||||||||||||    
T  20054412 attgccgactgaccccacaaaccaacacgagtcttttcagcgtgtttt 20054459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 410 - 457
Target Start/End: Original strand, 20054868 - 20054915
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    |||| |||||||| | ||||||||||||||||||||||||||||||||    
T  20054868 attgccgactgaccccacaaaccaacacgagtcttttcagcgtgtttt 20054915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 410 - 457
Target Start/End: Original strand, 20055324 - 20055371
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    |||| |||||||| | ||||||||||||||||||||||||||||||||    
T  20055324 attgccgactgaccccacaaaccaacacgagtcttttcagcgtgtttt 20055371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 410 - 457
Target Start/End: Original strand, 20055780 - 20055827
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    |||| |||||||| | ||||||||||||||||||||||||||||||||    
T  20055780 attgccgactgaccccacaaaccaacacgagtcttttcagcgtgtttt 20055827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 410 - 457
Target Start/End: Original strand, 20056236 - 20056283
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    |||| |||||||| | ||||||||||||||||||||||||||||||||    
T  20056236 attgccgactgaccccacaaaccaacacgagtcttttcagcgtgtttt 20056283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 410 - 457
Target Start/End: Original strand, 20056692 - 20056739
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    |||| |||||||| | ||||||||||||||||||||||||||||||||    
T  20056692 attgccgactgaccccacaaaccaacacgagtcttttcagcgtgtttt 20056739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 410 - 457
Target Start/End: Original strand, 20057139 - 20057186
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    |||| |||||||| | ||||||||||||||||||||||||||||||||    
T  20057139 attgccgactgaccccacaaaccaacacgagtcttttcagcgtgtttt 20057186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 410 - 457
Target Start/End: Original strand, 20057595 - 20057642
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    |||| |||||||| | ||||||||||||||||||||||||||||||||    
T  20057595 attgccgactgaccccacaaaccaacacgagtcttttcagcgtgtttt 20057642  T

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Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 410 - 457
Target Start/End: Original strand, 20845537 - 20845584
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    |||| |||||||| | ||||||||||||||||||||||||||||||||    
T  20845537 attgccgactgaccccacaaaccaacacgagtcttttcagcgtgtttt 20845584  T

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Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 410 - 457
Target Start/End: Original strand, 35759940 - 35759987
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    |||| |||||||| | ||||||||||||||||||||||||||||||||    
T  35759940 attgccgactgaccccacaaaccaacacgagtcttttcagcgtgtttt 35759987  T

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Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 410 - 457
Target Start/End: Original strand, 46693611 - 46693658
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    ||||||||||||| | ||||||||||||| ||||||||||||||||||    
T  46693611 attgtcgactgaccccacaaaccaacacgggtcttttcagcgtgtttt 46693658  T

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Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 416 - 457
Target Start/End: Original strand, 50002957 - 50002998
Alignment:
Q  416 gactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    ||||||| | ||||||||||||||||||||||||||||||||    
T  50002957 gactgaccccacaaaccaacacgagtcttttcagcgtgtttt 50002998  T

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Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 410 - 457
Target Start/End: Complemental strand, 7547907 - 7547860
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    ||||||||||||| ||||||| ||||||||| |||||||| |||||||    
T  7547907 attgtcgactgaccctacaaatcaacacgagacttttcagtgtgtttt 7547860  T

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Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 410 - 457
Target Start/End: Original strand, 28181369 - 28181416
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    |||||| |||| ||| |||||||||||||||||||||||| |||||||    
T  28181369 attgtcaactgcctccacaaaccaacacgagtcttttcagagtgtttt 28181416  T

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Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 410 - 457
Target Start/End: Original strand, 35759484 - 35759531
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    |||| |||||||| | | ||||||||||||||||||||||||||||||    
T  35759484 attgccgactgaccccaaaaaccaacacgagtcttttcagcgtgtttt 35759531  T

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Target: scaffold0499 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0499
Description:

Target: scaffold0499; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 410 - 457
Target Start/End: Original strand, 1927 - 1974
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    ||||||||||||| | ||||||||||||||||||||||||||| ||||    
T  1927 attgtcgactgaccccacaaaccaacacgagtcttttcagcgtatttt 1974  T

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Target: scaffold0389 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 410 - 457
Target Start/End: Original strand, 13409 - 13456
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    |||| |||||||| | ||||||||||||||||||||||||||||||||    
T  13409 attgccgactgaccccacaaaccaacacgagtcttttcagcgtgtttt 13456  T

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Target: scaffold0322 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0322
Description:

Target: scaffold0322; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 410 - 457
Target Start/End: Complemental strand, 19236 - 19189
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    |||| |||||||| | ||||||||||||||||||||||||||||||||    
T  19236 attgccgactgaccccacaaaccaacacgagtcttttcagcgtgtttt 19189  T

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Target: scaffold0217 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 410 - 457
Target Start/End: Complemental strand, 580 - 533
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    |||| |||||||| | ||||||||||||||||||||||||||||||||    
T  580 attgccgactgaccccacaaaccaacacgagtcttttcagcgtgtttt 533  T

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Target: scaffold0024 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 410 - 457
Target Start/End: Complemental strand, 105990 - 105943
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    |||| |||||||| ||| ||||||||||||||||||||||||||||||    
T  105990 attgccgactgaccctataaaccaacacgagtcttttcagcgtgtttt 105943  T

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Target: scaffold0047 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 403 - 457
Target Start/End: Original strand, 17467 - 17521
Alignment:
Q  403 tttaaatattgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    ||||| ||||| |||||||| |||  |||||||||||||||||||||||||||||    
T  17467 tttaagtattgccgactgaccctatgaaccaacacgagtcttttcagcgtgtttt 17521  T

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Target: scaffold0047; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 410 - 455
Target Start/End: Original strand, 18011 - 18056
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtt 455  Q
    |||||||| |||| ||||||| ||||||||||||||||||||||||    
T  18011 attgtcgattgaccctacaaatcaacacgagtcttttcagcgtgtt 18056  T

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Target: scaffold0442 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0442
Description:

Target: scaffold0442; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 417 - 454
Target Start/End: Complemental strand, 38 - 1
Alignment:
Q  417 actgactctacaaaccaacacgagtcttttcagcgtgt 454  Q
    |||||| |||||||||||||||||||||||||||||||    
T  38 actgaccctacaaaccaacacgagtcttttcagcgtgt 1  T

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Target: scaffold1519 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 457
Target Start/End: Original strand, 1581 - 1624
Alignment:
Q  414 tcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    ||||||||| | ||||||||||||||||||||| ||||||||||    
T  1581 tcgactgaccccacaaaccaacacgagtctttttagcgtgtttt 1624  T

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Target: scaffold0277 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 410 - 457
Target Start/End: Original strand, 14578 - 14625
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    ||||||| ||||| | ||||||||||||||||||||||||| ||||||    
T  14578 attgtcggctgaccccacaaaccaacacgagtcttttcagcatgtttt 14625  T

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Target: scaffold0168 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 410 - 457
Target Start/End: Complemental strand, 3012 - 2965
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    |||| |||||||| | ||||| ||||||||||||||||||||||||||    
T  3012 attgccgactgaccccacaaatcaacacgagtcttttcagcgtgtttt 2965  T

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Target: scaffold0065 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 410 - 457
Target Start/End: Original strand, 62983 - 63030
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    |||| |||||||| | ||||||||| ||||||||||||||||||||||    
T  62983 attgccgactgaccccacaaaccaatacgagtcttttcagcgtgtttt 63030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 410 - 457
Target Start/End: Original strand, 2086 - 2133
Alignment:
Q  410 attgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    ||||||||||||| | |||||||||||||||||||||||  |||||||    
T  2086 attgtcgactgaccccacaaaccaacacgagtcttttcaatgtgtttt 2133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 403 - 457
Target Start/End: Original strand, 37182 - 37236
Alignment:
Q  403 tttaaatattgtcgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    ||||| |||||| || || | |||||||||||||||| |||||||||||||||||    
T  37182 tttaagtattgttgattggccctacaaaccaacacgaatcttttcagcgtgtttt 37236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 415 - 457
Target Start/End: Original strand, 107344 - 107386
Alignment:
Q  415 cgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    |||||||| | ||||||||||||||||||||||||| ||||||    
T  107344 cgactgaccccacaaaccaacacgagtcttttcagcatgtttt 107386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 415 - 457
Target Start/End: Complemental strand, 245813 - 245771
Alignment:
Q  415 cgactgactctacaaaccaacacgagtcttttcagcgtgtttt 457  Q
    |||||||| | ||||||||||||||||||||||| ||||||||    
T  245813 cgactgaccccacaaaccaacacgagtcttttcaacgtgtttt 245771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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