View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11718_low_27 (Length: 441)

Name: NF11718_low_27
Description: NF11718
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11718_low_27
NF11718_low_27
[»] chr3 (19 HSPs)
chr3 (27-441)||(5454577-5454998)
chr3 (27-441)||(5445995-5446439)
chr3 (288-441)||(5490022-5490175)
chr3 (27-157)||(5828444-5828574)
chr3 (27-239)||(5502597-5502815)
chr3 (27-157)||(5489772-5489902)
chr3 (27-156)||(5854433-5854562)
chr3 (27-156)||(5849238-5849367)
chr3 (27-156)||(20343230-20343359)
chr3 (239-441)||(20343415-20343618)
chr3 (27-157)||(5802842-5802972)
chr3 (337-441)||(5502886-5502988)
chr3 (40-157)||(5484371-5484488)
chr3 (27-157)||(5525415-5525533)
chr3 (192-253)||(5489928-5489989)
chr3 (291-367)||(5849058-5849132)
chr3 (350-441)||(5525736-5525825)
chr3 (350-441)||(5484690-5484781)
chr3 (375-441)||(5854282-5854348)
[»] chr6 (1 HSPs)
chr6 (27-441)||(25809373-25809817)


Alignment Details
Target: chr3 (Bit Score: 352; Significance: 0; HSPs: 19)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 352; E-Value: 0
Query Start/End: Original strand, 27 - 441
Target Start/End: Original strand, 5454577 - 5454998
Alignment:
Q  27 ccaatcttctttttatatgctgatgtgaccaaaacaagaactattagtcctataatgaatgcaataactcctgcaagagtcccagcaagcttcaacttct 126  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  5454577 ccaatcttctttttatatgctgatgtgaccaatacaagaactattagtcctatagtgaatgcaataactcctgcaagagtcccagcaagcttcaacttct 5454676  T
Q  127 gcttattctttttatgatctgagggttgaagctta-------ctaaaaagaaggtatagaagcttactaaaaagaagagaaatgcatctatagagaacac 219  Q
    ||||||||||||||||||||||||||||||| | |       | || |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5454677 gcttattctttttatgatctgagggttgaagttaatgtcagtcaaacaagaaggtatagaagcttactaaaaagaagagaaatgcatctatagagaacac 5454776  T
Q  220 aacttccatctggaagttgattcatgatcatttgttcttagaaatagcccaggtacatacttacttgcgaaaagagaatttactagtgtgacgtaatttc 319  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  5454777 aacttccatctggaagttgatttatgatcatttgttcttagaaatagcccaggtacatacttacttgtgaaaagagaatttactagtgtgacgtaatttc 5454876  T
Q  320 aagttttcagcaatgcttaataatatcaagacaaatggtgaaatatataagtctatgctatatatctaaccgaaaagacaaaatatgcaataagaaaaga 419  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| ||||||||||||    
T  5454877 aagttttcagcaatgcttaataatatcaagacaaatggtgaaatatataagtttatgctatatatctaactgaaaagacaaaatatgtaataagaaaaga 5454976  T
Q  420 aaataccaagttctgaagatgc 441  Q
    ||||||||||||||||||||||    
T  5454977 aaataccaagttctgaagatgc 5454998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 27 - 441
Target Start/End: Original strand, 5445995 - 5446439
Alignment:
Q  27 ccaatcttctttttatatgctgatgtgaccaaaacaagaactattagtcctataatgaatgcaataactcctgcaagagtcccagcaagcttcaacttct 126  Q
    |||| ||||||| ||||  ||||||||||||| ||||||||  ||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  5445995 ccaagcttctttctatacactgatgtgaccaatacaagaacgtttagtcctataatgaatgcaacaactcctgcaagagtcccagcaagcttcaatttct 5446094  T
Q  127 gcttattctttttatgatctgagggttgaagcttact-------aaaaagaaggtatagaagcttactaaaaagaagagaaatgcatctatagagaacac 219  Q
    ||||||||||||||||||||||||||||||| ||| |       || |||  ||||||||||||||||||| |||||| |||  ||||||| ||||||||    
T  5446095 gcttattctttttatgatctgagggttgaag-ttaatgtcagtcaacaagctggtatagaagcttactaaagagaagaaaaaaacatctatggagaacac 5446193  T
Q  220 aacttccatctggaagttgattcatgatcatttg---------------------ttcttagaaatagcccaggtacatacttactt----gcgaaaaga 294  Q
    | ||||||| ||| ||||||||||||||||||||                     |||||||||| ||| |||||| |||||||| |    | |||||||    
T  5446194 agcttccatttgggagttgattcatgatcatttggaagttgaacacaacttcttcttcttagaaa-agctcaggtatatacttacataaaagtgaaaaga 5446292  T
Q  295 gaatttactagtgtgacgtaatttcaagttttcagcaatgcttaataatatcaagacaaatggtgaaatatataagtctatgctatatatctaaccgaaa 394  Q
    ||||||| |||||| |||||||||||||||||||   ||||||||||||||||| |||||||||||||||| ||| | ||||||||||||||||| ||||    
T  5446293 gaatttaatagtgtcacgtaatttcaagttttcaaggatgcttaataatatcaacacaaatggtgaaatatgtaaatttatgctatatatctaactgaaa 5446392  T
Q  395 agacaaaatatgcaataagaaaagaaaataccaagttctgaagatgc 441  Q
     ||||||||||| ||||| ||| ||||||||||||||||||||||||    
T  5446393 ggacaaaatatgtaataacaaatgaaaataccaagttctgaagatgc 5446439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 288 - 441
Target Start/End: Original strand, 5490022 - 5490175
Alignment:
Q  288 gaaaagagaatttactagtgtgacgtaatttcaagttttcag-caatgcttaataatatcaagacaaatggtgaaatatataagtctatgctatatatct 386  Q
    ||||||||||||||||||||| |||||||||||||||||||  || |||||||||||||||| |||||||||||||||| ||| | ||||||||||||||    
T  5490022 gaaaagagaatttactagtgtcacgtaatttcaagttttcaaacagtgcttaataatatcaacacaaatggtgaaatat-taaatttatgctatatatct 5490120  T
Q  387 aaccgaaaagacaaaatatgcaataagaaaagaaaataccaagttctgaagatgc 441  Q
    ||| |||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  5490121 aactgaaaagacaaaatatgtaataagaaatgaaaataccaagttctgaagatgc 5490175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 27 - 157
Target Start/End: Complemental strand, 5828574 - 5828444
Alignment:
Q  27 ccaatcttctttttatatgctgatgtgaccaaaacaagaactattagtcctataatgaatgcaataactcctgcaagagtcccagcaagcttcaacttct 126  Q
    |||| ||||||| |||||||||||||| |||| || ||||| |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  5828574 ccaagcttctttctatatgctgatgtggccaataccagaacgattagtccaataatgaatgcaataactcctgcaagagtcccaacaagcttcaacttct 5828475  T
Q  127 gcttattctttttatgatctgagggttgaag 157  Q
      |||||||||||||||||||||||||||||    
T  5828474 cgttattctttttatgatctgagggttgaag 5828444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 27 - 239
Target Start/End: Original strand, 5502597 - 5502815
Alignment:
Q  27 ccaatcttctttttatatgctgatgtgaccaaaacaagaactattagtcctataatgaatgcaataactcctgcaagagtcccagcaagcttcaacttct 126  Q
    |||| ||||||| ||||| ||||||||| ||| || |||||  ||||||||||||||||||||| |||||||||||||||||||||||||||||| |||     
T  5502597 ccaagcttctttctatatactgatgtgatcaatacgagaacggttagtcctataatgaatgcaacaactcctgcaagagtcccagcaagcttcaatttcc 5502696  T
Q  127 gcttattctttttatgatctgagggttgaagcttact-------aaaaagaaggtatagaagcttactaaaaagaagagaaatgcatctatagagaacac 219  Q
    ||||||||||||||||||||||||||||||  ||| |       || |||||||||||| ||  ||||||| |||||| |||  |||| ||||||||||     
T  5502697 gcttattctttttatgatctgagggttgaa-attaatgtcagtcaacaagaaggtataggagtatactaaagagaagaaaaaaacatcgatagagaacaa 5502795  T
Q  220 aacttccatctggaagttga 239  Q
    ||||||||| ||||||||||    
T  5502796 aacttccatttggaagttga 5502815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 27 - 157
Target Start/End: Original strand, 5489772 - 5489902
Alignment:
Q  27 ccaatcttctttttatatgctgatgtgaccaaaacaagaactattagtcctataatgaatgcaataactcctgcaagagtcccagcaagcttcaacttct 126  Q
    |||| ||||||| |||||| |||||||| |||||| |||||  ||||| |||||||||||||||||||||||||||||||||||||||||||||| |||     
T  5489772 ccaagcttctttctatatgttgatgtgatcaaaacgagaacgcttagtactataatgaatgcaataactcctgcaagagtcccagcaagcttcaatttcc 5489871  T
Q  127 gcttattctttttatgatctgagggttgaag 157  Q
    ||||||||| |||||||||||||||||||||    
T  5489872 gcttattctctttatgatctgagggttgaag 5489902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 27 - 156
Target Start/End: Complemental strand, 5854562 - 5854433
Alignment:
Q  27 ccaatcttctttttatatgctgatgtgaccaaaacaagaactattagtcctataatgaatgcaataactcctgcaagagtcccagcaagcttcaacttct 126  Q
    |||| ||||||||||||||||||||||||||| |||||||| |||||||||||||| |||| |||||||||||||| |||||||||| ||||||| |||     
T  5854562 ccaagcttctttttatatgctgatgtgaccaatacaagaacgattagtcctataataaatgtaataactcctgcaacagtcccagcatgcttcaagttcc 5854463  T
Q  127 gcttattctttttatgatctgagggttgaa 156  Q
     ||||||||||||||||||||||| |||||    
T  5854462 tcttattctttttatgatctgaggattgaa 5854433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 27 - 156
Target Start/End: Complemental strand, 5849367 - 5849238
Alignment:
Q  27 ccaatcttctttttatatgctgatgtgaccaaaacaagaactattagtcctataatgaatgcaataactcctgcaagagtcccagcaagcttcaacttct 126  Q
    ||||| |||| | ||||||||||||| ||||| ||||||||  |||||||||| ||||| ||||| |||||||||| ||||| |||| ||||||| ||      
T  5849367 ccaattttctctctatatgctgatgtaaccaatacaagaacggttagtcctattatgaacgcaatgactcctgcaacagtccaagcacgcttcaagtttc 5849268  T
Q  127 gcttattctttttatgatctgagggttgaa 156  Q
    ||||||||||||||||||||||||||||||    
T  5849267 gcttattctttttatgatctgagggttgaa 5849238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 27 - 156
Target Start/End: Original strand, 20343230 - 20343359
Alignment:
Q  27 ccaatcttctttttatatgctgatgtgaccaaaacaagaactattagtcctataatgaatgcaataactcctgcaagagtcccagcaagcttcaacttct 126  Q
    |||| ||||||| |||||||||| |||||||| || |||||   |||||||||||| ||||||||||| || |||| | |||||| ||||||||| |||     
T  20343230 ccaagcttctttctatatgctgacgtgaccaatacgagaacggctagtcctataataaatgcaataaccccggcaaaaatcccagaaagcttcaagttcc 20343329  T
Q  127 gcttattctttttatgatctgagggttgaa 156  Q
     |||||||||||||||||||||||||||||    
T  20343330 tcttattctttttatgatctgagggttgaa 20343359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 239 - 441
Target Start/End: Original strand, 20343415 - 20343618
Alignment:
Q  239 attcatgatcatttgttcttagaaatagcccaggtacatacttacttgcgaaaagagaatttactagtgtgacgtaatttcaagttttcagcaatgctta 338  Q
    |||||||| ||  ||||||||||||||   |||||||||||||    | |||||||||||||| |||||| || | ||||||| | |||| ||   ||||    
T  20343415 attcatgaccaactgttcttagaaatatttcaggtacatactttaaagtgaaaagagaatttattagtgtcacatgatttcaactattcaacaggactta 20343514  T
Q  339 ataatatcaagacaaatggtgaaatatat-aagtctatgctatatatctaaccgaaaagacaaaatatgcaataagaaaagaaaataccaagttctgaag 437  Q
    ||| |||||||| ||||| |||||||||| || | | ||| ||||||||||| | ||||  |||| ||| |||| |||| ||||||||||||||||||||    
T  20343515 atactatcaagataaatgctgaaatatatgaaatttgtgcaatatatctaactggaaaggaaaaagatgtaataggaaatgaaaataccaagttctgaag 20343614  T
Q  438 atgc 441  Q
    ||||    
T  20343615 atgc 20343618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 27 - 157
Target Start/End: Complemental strand, 5802972 - 5802842
Alignment:
Q  27 ccaatcttctttttatatgctgatgtgaccaaaacaagaactattagtcctataatgaatgcaataactcctgcaagagtcccagcaagcttcaacttct 126  Q
    |||| ||||||| || |||||||||||||||||||||||||  ||| |   |||| ||||||   ||||||||||||||||||  || ||||||| |||     
T  5802972 ccaagcttctttctagatgctgatgtgaccaaaacaagaacggttaatagcataacgaatgccgaaactcctgcaagagtcccgacacgcttcaaattcc 5802873  T
Q  127 gcttattctttttatgatctgagggttgaag 157  Q
     ||||||||||||||||||||| ||||||||    
T  5802872 tcttattctttttatgatctgaaggttgaag 5802842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 337 - 441
Target Start/End: Original strand, 5502886 - 5502988
Alignment:
Q  337 taataatatcaagacaaatggtgaaatatataagtctatgctatatatctaaccgaaaagacaaaatatgcaataagaaaagaaaataccaagttctgaa 436  Q
    |||||||||||| |||||||||||||||| ||| | ||||||||||  ||||| |||| ||||||||||| ||||  ||| |||||||||||| ||||||    
T  5502886 taataatatcaacacaaatggtgaaatatgtaaatttatgctatat--ctaactgaaaggacaaaatatgtaatagcaaatgaaaataccaagctctgaa 5502983  T
Q  437 gatgc 441  Q
    |||||    
T  5502984 gatgc 5502988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 40 - 157
Target Start/End: Original strand, 5484371 - 5484488
Alignment:
Q  40 tatatgctgatgtgaccaaaacaagaactattagtcctataatgaatgcaataactcctgcaagagtcccagcaagcttcaacttctgcttattcttttt 139  Q
    ||||||||||| ||||||  ||||||||   ||||||||| |||||||||||||||||||||| ||||| | || ||||||| ||   | |||||||| |    
T  5484371 tatatgctgatatgaccattacaagaacggatagtcctattatgaatgcaataactcctgcaacagtccgaacacgcttcaagtttctcgtattctttat 5484470  T
Q  140 atgatctgagggttgaag 157  Q
    ||||||||  ||||||||    
T  5484471 atgatctgtaggttgaag 5484488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 27 - 157
Target Start/End: Original strand, 5525415 - 5525533
Alignment:
Q  27 ccaatcttctttttatatgctgatgtgaccaaaacaagaactattagtcctataatgaatgcaataactcctgcaagagtcccagcaagcttcaacttct 126  Q
    |||| ||||||| ||||| ||||||||||||| | |||||| ||||||||||||||            |||||| | |||||||||||||||| | |||     
T  5525415 ccaagcttctttctatatactgatgtgaccaatataagaacaattagtcctataat------------tcctgcgacagtcccagcaagcttcgagttcc 5525502  T
Q  127 gcttattctttttatgatctgagggttgaag 157  Q
     ||||||||||||||||||||| ||||||||    
T  5525503 tcttattctttttatgatctgatggttgaag 5525533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 192 - 253
Target Start/End: Original strand, 5489928 - 5489989
Alignment:
Q  192 agaagagaaatgcatctatagagaacacaacttccatctggaagttgattcatgatcatttg 253  Q
    |||||| ||| |||||| |||||| |||||||||||| ||| |||| |||||||||||||||    
T  5489928 agaagaaaaaagcatctttagagagcacaacttccatttgggagtttattcatgatcatttg 5489989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 291 - 367
Target Start/End: Complemental strand, 5849132 - 5849058
Alignment:
Q  291 aagagaatttactagtgtgacgtaatttcaagttttcagcaatgcttaataatatcaagacaaatggtgaaatatat 367  Q
    |||||||||||  ||||| || ||||||||||||| || || ||||||||||||| |||| ||||| ||||||||||    
T  5849132 aagagaattta--agtgtcacctaatttcaagtttacaacagtgcttaataatatgaagaaaaatgctgaaatatat 5849058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 350 - 441
Target Start/End: Original strand, 5525736 - 5525825
Alignment:
Q  350 acaaatggtgaaatatataagtctatgctatatatctaaccgaaaagacaaaatatgcaataagaaaagaaaataccaagttctgaagatgc 441  Q
    ||||||| |||||||||||| | |  |||||||||||||| ||||||  ||||||||  ||| |||   |||||||||||||||||||||||    
T  5525736 acaaatgatgaaatatataaatgt--gctatatatctaactgaaaaggaaaaatatgtgataggaagttaaaataccaagttctgaagatgc 5525825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 350 - 441
Target Start/End: Original strand, 5484690 - 5484781
Alignment:
Q  350 acaaatggtgaaatatataagtctatgctatatatctaaccgaaaagacaaaatatgcaataagaaaagaaaataccaagttctgaagatgc 441  Q
    ||||||| ||||||| |||| | | |||||||||||| || ||| ||| ||||||||   |  |||| ||||||||||||||||||||||||    
T  5484690 acaaatgatgaaataaataaatttgtgctatatatctgactgaagagataaaatatgtctttggaaatgaaaataccaagttctgaagatgc 5484781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 375 - 441
Target Start/End: Complemental strand, 5854348 - 5854282
Alignment:
Q  375 tgctatatatctaaccgaaaagacaaaatatgcaataagaaaagaaaataccaagttctgaagatgc 441  Q
    |||||||||||  || |||||| ||||| ||| |||| |||| | ||||||||||||||||||||||    
T  5854348 tgctatatatcagactgaaaaggcaaaagatgtaataggaaatgtaaataccaagttctgaagatgc 5854282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 164; Significance: 2e-87; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 27 - 441
Target Start/End: Complemental strand, 25809817 - 25809373
Alignment:
Q  27 ccaatcttctttttatatgctgatgtgaccaaaacaagaactattagtcctataatgaatgcaataactcctgcaagagtcccagcaagcttcaacttct 126  Q
    |||| ||||||| ||||  ||||||||||||| ||||||||  ||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  25809817 ccaagcttctttctatacactgatgtgaccaatacaagaacgtttagtcctataatgaatgcaacaactcctgcaagagtcccagcaagcttcaatttct 25809718  T
Q  127 gcttattctttttatgatctgagggttgaagcttact-------aaaaagaaggtatagaagcttactaaaaagaagagaaatgcatctatagagaacac 219  Q
    ||||||||||||||||||||||||||||||| ||| |       || |||  ||||||||||||||||||| |||||| |||  ||||||| ||||||||    
T  25809717 gcttattctttttatgatctgagggttgaag-ttaatgtcagtcaacaagctggtatagaagcttactaaagagaagaaaaaaacatctatggagaacac 25809619  T
Q  220 aacttccatctggaagttgattcatgatcatttg---------------------ttcttagaaatagcccaggtacatacttactt----gcgaaaaga 294  Q
    | ||||||| ||| ||||||||||||||||||||                     |||||||||| ||| |||||| |||||||| |    | |||||||    
T  25809618 agcttccatttgggagttgattcatgatcatttggaagttgaacacaacttcttcttcttagaaa-agctcaggtatatacttacataaaagtgaaaaga 25809520  T
Q  295 gaatttactagtgtgacgtaatttcaagttttcagcaatgcttaataatatcaagacaaatggtgaaatatataagtctatgctatatatctaaccgaaa 394  Q
    ||||||| |||||| |||||||||||||||||||   ||||||||||||||||| |||||||||||||||| ||| | ||||||||||||||||| ||||    
T  25809519 gaatttaatagtgtcacgtaatttcaagttttcaaggatgcttaataatatcaacacaaatggtgaaatatgtaaatttatgctatatatctaactgaaa 25809420  T
Q  395 agacaaaatatgcaataagaaaagaaaataccaagttctgaagatgc 441  Q
     ||||||||||| ||||| ||| ||||||||||||||||||||||||    
T  25809419 ggacaaaatatgtaataacaaatgaaaataccaagttctgaagatgc 25809373  T

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