View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11718_low_64 (Length: 239)
Name: NF11718_low_64
Description: NF11718
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11718_low_64 |
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Alignment Details
Target: chr7 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 20 - 229
Target Start/End: Complemental strand, 43018363 - 43018154
Alignment:
| Q |
20 |
aggtgcaacctaaaaaagtatctaccagcattacaaacaatcgaaatcggatcactgatccaaatagaaataacaattattaattgctccactaatttac |
119 |
Q |
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| T |
43018363 |
aggtgcaacctaaaaaagtatctaccagcattacaaacaatcgaaatcggatcactgatccaaatagaaataacaattattaattgctccactaatttac |
43018264 |
T |
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| Q |
120 |
aactaatttaataagattaatctcaacaaaagaaatttcaaacataaaataaatttcatacatatatgcaaaatcaaagttgatgtgtcccatctcaatc |
219 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43018263 |
tactaatttaataagattaatctcaacaaaagaaatttcaaacataaaataaatttcatacatatatgcaaaatcaaagttgatgtgtcccatctcaatc |
43018164 |
T |
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| Q |
220 |
ctatgctact |
229 |
Q |
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||| |||||| |
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| T |
43018163 |
ctaagctact |
43018154 |
T |
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