View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11719_low_4 (Length: 336)
Name: NF11719_low_4
Description: NF11719
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11719_low_4 |
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Alignment Details
Target: chr6 (Bit Score: 286; Significance: 1e-160; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 10 - 319
Target Start/End: Original strand, 7619168 - 7619477
Alignment:
| Q |
10 |
ggacatcaacaatagaagatagtggaaacatcaatcaaactacaagaaacttcatgaccttgttttagcaccctttatataaccatagaaattccaaatt |
109 |
Q |
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| T |
7619168 |
ggacatcaacaatagaagatagtggaaacatcaatcaaactacaagaaacttcatgatcttgtttttgcaccctttatataaccatagaaattccaaatt |
7619267 |
T |
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| Q |
110 |
atttctcatatgatcaatacaaatataacttcttggtaccctaaaacacacaacacgtaacacttaaaccatgtcattcatttcacaacttctaggtaat |
209 |
Q |
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| T |
7619268 |
atttctcatatgatcaatacaaatacaacttcttggtaccctaatacacacaacacttaacacttaaaccatgtcattcatttcacaacttctaggtaat |
7619367 |
T |
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| Q |
210 |
gaaacctatgatcctttcttatctatggtaaacaaatgtcctgtcctaagcaccccaacagattggaaagaaaccaaagatgcacatgtttttatatctg |
309 |
Q |
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| T |
7619368 |
gaaacctatgatcctttcttatctatggtaaaaaaatgtcctgtcctaagcaccccaacagattggaaagaaaccaaagatgcacatgtttttatatctg |
7619467 |
T |
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| Q |
310 |
accttccagg |
319 |
Q |
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| T |
7619468 |
accttccagg |
7619477 |
T |
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