View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1171_high_3 (Length: 447)

Name: NF1171_high_3
Description: NF1171
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1171_high_3
NF1171_high_3
[»] chr2 (15 HSPs)
chr2 (1-437)||(2331821-2332254)
chr2 (2-82)||(22084778-22084863)
chr2 (2-59)||(35056896-35056953)
chr2 (1-63)||(28524453-28524515)
chr2 (1-82)||(36756295-36756376)
chr2 (1-77)||(34784938-34785014)
chr2 (8-77)||(36096331-36096400)
chr2 (1-81)||(11223816-11223895)
chr2 (1-36)||(44860347-44860382)
chr2 (4-82)||(37419773-37419851)
chr2 (16-82)||(42511344-42511409)
chr2 (33-82)||(20242689-20242738)
chr2 (1-33)||(5367219-5367251)
chr2 (1-37)||(12668419-12668455)
chr2 (1-33)||(20242727-20242759)
[»] chr6 (18 HSPs)
chr6 (1-105)||(16766724-16766827)
chr6 (8-84)||(16488539-16488615)
chr6 (8-84)||(18367870-18367946)
chr6 (4-82)||(9107321-9107399)
chr6 (1-87)||(9522918-9523004)
chr6 (1-82)||(8365470-8365551)
chr6 (22-82)||(3209436-3209496)
chr6 (1-37)||(9025490-9025526)
chr6 (1-44)||(26562716-26562759)
chr6 (1-84)||(31384947-31385029)
chr6 (1-43)||(34073337-34073379)
chr6 (1-59)||(34868760-34868818)
chr6 (1-81)||(10339077-10339158)
chr6 (1-33)||(7027269-7027301)
chr6 (1-33)||(7265593-7265625)
chr6 (1-37)||(9027205-9027241)
chr6 (1-105)||(17302584-17302687)
chr6 (1-45)||(21395296-21395340)
[»] chr5 (17 HSPs)
chr5 (8-84)||(6401532-6401608)
chr5 (4-59)||(3966533-3966588)
chr5 (1-80)||(18592100-18592179)
chr5 (1-84)||(21542057-21542140)
chr5 (1-85)||(21522777-21522861)
chr5 (1-85)||(21533343-21533427)
chr5 (8-84)||(21814295-21814371)
chr5 (202-349)||(7298086-7298238)
chr5 (1-82)||(30098353-30098434)
chr5 (1-82)||(19579728-19579809)
chr5 (1-45)||(41091245-41091289)
chr5 (1-59)||(11685966-11686023)
chr5 (1-82)||(7677732-7677813)
chr5 (33-82)||(21191018-21191067)
chr5 (4-45)||(37328832-37328873)
chr5 (1-82)||(39698568-39698649)
chr5 (16-60)||(19453039-19453083)
[»] chr4 (11 HSPs)
chr4 (1-85)||(30982826-30982910)
chr4 (1-82)||(22234841-22234922)
chr4 (8-84)||(5414121-5414197)
chr4 (9-77)||(46083947-46084015)
chr4 (2-79)||(30838238-30838315)
chr4 (24-82)||(15724505-15724563)
chr4 (1-82)||(24613652-24613733)
chr4 (3-63)||(44132614-44132674)
chr4 (1-81)||(5225565-5225645)
chr4 (2-81)||(28000693-28000773)
chr4 (1-37)||(46160923-46160959)
[»] chr7 (9 HSPs)
chr7 (1-82)||(24339669-24339750)
chr7 (3-81)||(6630864-6630942)
chr7 (1-37)||(22602706-22602742)
chr7 (4-59)||(26329356-26329411)
chr7 (39-84)||(9778559-9778604)
chr7 (4-105)||(25822685-25822785)
chr7 (1-37)||(7328687-7328723)
chr7 (1-37)||(17307920-17307956)
chr7 (1-37)||(18013070-18013106)
[»] chr1 (19 HSPs)
chr1 (1-82)||(9828071-9828152)
chr1 (1-82)||(47989524-47989605)
chr1 (1-84)||(6612120-6612203)
chr1 (1-82)||(5944310-5944391)
chr1 (1-54)||(44482257-44482310)
chr1 (8-84)||(25934650-25934726)
chr1 (1-59)||(34371740-34371798)
chr1 (1-82)||(16164266-16164347)
chr1 (1-45)||(25361913-25361957)
chr1 (1-82)||(1486666-1486741)
chr1 (1-79)||(30173716-30173794)
chr1 (4-82)||(40917779-40917857)
chr1 (1-38)||(7918206-7918243)
chr1 (1-54)||(31694689-31694742)
chr1 (2-74)||(9629859-9629931)
chr1 (1-37)||(20157346-20157382)
chr1 (1-33)||(30749867-30749899)
chr1 (1-33)||(30771318-30771350)
chr1 (33-105)||(32461393-32461464)
[»] chr8 (13 HSPs)
chr8 (1-61)||(26902147-26902207)
chr8 (1-84)||(28384942-28385026)
chr8 (1-82)||(29447061-29447142)
chr8 (1-82)||(15816080-15816161)
chr8 (1-81)||(12570461-12570540)
chr8 (1-36)||(11927083-11927118)
chr8 (1-59)||(2572030-2572088)
chr8 (1-82)||(22652003-22652084)
chr8 (8-84)||(34450981-34451062)
chr8 (1-33)||(4786338-4786370)
chr8 (1-33)||(8847283-8847315)
chr8 (1-81)||(12570687-12570766)
chr8 (1-81)||(29447471-29447551)
[»] scaffold0123 (1 HSPs)
scaffold0123 (1-59)||(44499-44557)
[»] scaffold0003 (1 HSPs)
scaffold0003 (1-82)||(241621-241702)
[»] chr3 (16 HSPs)
chr3 (2-82)||(8039786-8039866)
chr3 (2-82)||(17005570-17005650)
chr3 (2-85)||(15796242-15796325)
chr3 (16-82)||(13806278-13806344)
chr3 (1-82)||(4987242-4987323)
chr3 (1-108)||(14209140-14209246)
chr3 (2-45)||(16789040-16789083)
chr3 (1-63)||(10690233-10690294)
chr3 (4-82)||(34185074-34185152)
chr3 (5-107)||(41961577-41961678)
chr3 (1-82)||(28812542-28812623)
chr3 (1-33)||(7928477-7928509)
chr3 (2-58)||(14216920-14216976)
chr3 (2-58)||(14223049-14223105)
chr3 (1-33)||(38731245-38731277)
chr3 (1-33)||(40993335-40993367)
[»] scaffold0044 (1 HSPs)
scaffold0044 (1-84)||(53207-53290)
[»] scaffold0019 (1 HSPs)
scaffold0019 (4-82)||(71755-71833)
[»] scaffold0039 (1 HSPs)
scaffold0039 (10-87)||(84919-84996)
[»] scaffold0008 (1 HSPs)
scaffold0008 (1-82)||(263323-263404)
[»] scaffold1300 (1 HSPs)
scaffold1300 (1-85)||(602-686)
[»] scaffold0623 (1 HSPs)
scaffold0623 (8-84)||(5945-6021)
[»] scaffold0036 (1 HSPs)
scaffold0036 (3-63)||(9717-9777)
[»] scaffold0020 (2 HSPs)
scaffold0020 (4-45)||(137810-137851)
scaffold0020 (1-37)||(135308-135344)
[»] scaffold0171 (1 HSPs)
scaffold0171 (1-37)||(23447-23483)


Alignment Details
Target: chr2 (Bit Score: 386; Significance: 0; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 386; E-Value: 0
Query Start/End: Original strand, 1 - 437
Target Start/End: Original strand, 2331821 - 2332254
Alignment:
Q  1 cataattcagtgtatttatatgtgtcggtgtcgtgtcagtgtcggtcacaacacgtgtctgaccccaggacacgcctaatccaaataaatgtccgtgttt 100  Q
    |||||||||||||||||||  |||||||||||||||||||||||| |||| |||||||||||| |||||||||||||||||||| | |||||| ||||||    
T  2331821 cataattcagtgtatttat--gtgtcggtgtcgtgtcagtgtcgggcacagcacgtgtctgacaccaggacacgcctaatccaa-tgaatgtctgtgttt 2331917  T
Q  101 cataggttctcaatcgcatatgttacagagtgagaaaaactacaccgtatgaaacaagacatcatcacatatgcctacacaccttcacattctaagcttc 200  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  2331918 cataggttctcaatcgcatatgttacagagtgaaaaaaactacaccgtatgaaacgagacatcatcacatatgcctacacaccttcacattctaagcttc 2332017  T
Q  201 cagcctcaacttcttcataatttcaccttactaattatgttggacttgaaacttcaccctgctacacctcgacatatctactatatcagactgcctttca 300  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  2332018 cagcctcaacttcttcataatttcaccttactaattatgttggacttgaaacttcaccctgctacacctcaacatatctactatatcagactgcctttca 2332117  T
Q  301 ctgctaacaaaaacctgctgcaaagtaaacttaaaacatattgcaggccttaaattccaatatttgaaacaaaacaccagccaattagacctttcatcat 400  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2332118 ctgctaacaaaaacctgctgcaaagtaaacttaaaacatattgcaggccttaaattccaatatttgaaacaaaacaccagccaattagacctttcatcat 2332217  T
Q  401 ccttggttttggttgcttcttggaactccaatctgtg 437  Q
    |||||||||||||||||||||||||||||||||||||    
T  2332218 ccttggttttggttgcttcttggaactccaatctgtg 2332254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 22084863 - 22084778
Alignment:
Q  2 ataattcagtgta--tttatatgtgtcggtgtcgtgtcagtgtcggtcacaacacgtgtctgacccca---ggacacgcctaatcc 82  Q
    |||||||||||||  |||||||||| |||| ||||||||||||||| ||||||||||||||||| |||   |||||||||||||||    
T  22084863 ataattcagtgtaattttatatgtgccggtatcgtgtcagtgtcggacacaacacgtgtctgacaccaccgggacacgcctaatcc 22084778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 35056896 - 35056953
Alignment:
Q  2 ataattcagtgtatttatatgtgtcggtgtcgtgtcagtgtcggtcacaacacgtgtc 59  Q
    ||||||||||||| |||||||||||||||||||||| ||||||| ||| |||||||||    
T  35056896 ataattcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgacacgtgtc 35056953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 28524453 - 28524515
Alignment:
Q  1 cataattcagtgtatttatatgtgtcggtgtcgtgtcagtgtcggtcacaacacgtgtctgac 63  Q
    |||||||||||||| |||||||||||| ||| ||||  ||||||| |||||||||||||||||    
T  28524453 cataattcagtgtaattatatgtgtcgttgttgtgttggtgtcggacacaacacgtgtctgac 28524515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 36756376 - 36756295
Alignment:
Q  1 cataattcagtgtatttatatgtgtcggtgtcgtgtcagtgtcggtcacaacacgtgtctgaccccaggacacgcctaatcc 82  Q
    |||||||||||||| ||||| ||||||||||||||| |||||||  |||||||| |||| ||| ||   |||||||||||||    
T  36756376 cataattcagtgtaattataagtgtcggtgtcgtgttagtgtcgaacacaacacatgtccgacaccgcaacacgcctaatcc 36756295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 34785014 - 34784938
Alignment:
Q  1 cataattcagtgtatttatatgtgtcggtgtcgtgtcagtgtcggtcacaacacgtgtctgaccccaggacacgcct 77  Q
    ||||||| |||||| |||||||||||||||||||||| || |||| ||| |||| |||||||| |  ||||||||||    
T  34785014 cataatttagtgtaattatatgtgtcggtgtcgtgtcggtatcggacacgacacctgtctgacacggggacacgcct 34784938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 8 - 77
Target Start/End: Complemental strand, 36096400 - 36096331
Alignment:
Q  8 cagtgtatttatatgtgtcggtgtcgtgtcagtgtcggtcacaacacgtgtctgaccccaggacacgcct 77  Q
    ||||||| |||||| |||||||||||||||  |||||| ||| ||||||||||||| |  ||||||||||    
T  36096400 cagtgtaattatatttgtcggtgtcgtgtcgatgtcggacacgacacgtgtctgacacggggacacgcct 36096331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 11223895 - 11223816
Alignment:
Q  1 cataattcagtgtatttatatgtgtcggtgtcgtgtcagtgtcggtcacaacacgtgtctgaccccaggacacgcctaatc 81  Q
    |||||||||||||| ||| | ||||||||||| |||  ||||||| ||| |||| |||||||| || ||||||||||||||    
T  11223895 cataattcagtgtaattacaagtgtcggtgtcatgtaggtgtcggacacgacac-tgtctgacaccgggacacgcctaatc 11223816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 44860347 - 44860382
Alignment:
Q  1 cataattcagtgtatttatatgtgtcggtgtcgtgt 36  Q
    |||||||||||||| |||||||||||||||||||||    
T  44860347 cataattcagtgtaattatatgtgtcggtgtcgtgt 44860382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 37419773 - 37419851
Alignment:
Q  4 aattcagtgtatttatatgtgtcggtgtcgtgtcagtgtcggtcacaacacgtgtctgaccccaggacacgcctaatcc 82  Q
    ||||||||||| ||| | ||| |||||||||||| ||||||| ||| |  |||||| ||| || |||||||||||||||    
T  37419773 aattcagtgtaattacaagtgccggtgtcgtgtcggtgtcggacacgatgcgtgtccgacaccgggacacgcctaatcc 37419851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 16 - 82
Target Start/End: Complemental strand, 42511409 - 42511344
Alignment:
Q  16 ttatatgtgtcggtgtcgtgtcagtgtcggtcacaacacgtgtctgaccccaggacacgcctaatcc 82  Q
    |||||||||| |||||||| |||||||||| ||||||||||||| ||| |  ||||||| |||||||    
T  42511409 ttatatgtgttggtgtcgt-tcagtgtcggacacaacacgtgtccgacacagggacacggctaatcc 42511344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 82
Target Start/End: Complemental strand, 20242738 - 20242689
Alignment:
Q  33 gtgtcagtgtcggtcacaacacgtgtctgaccccaggacacgcctaatcc 82  Q
    ||||| ||||||| ||||||||||||||||| | ||||||||||| ||||    
T  20242738 gtgtcggtgtcggacacaacacgtgtctgacacgaggacacgccttatcc 20242689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 5367219 - 5367251
Alignment:
Q  1 cataattcagtgtatttatatgtgtcggtgtcg 33  Q
    |||||||||||||| ||||||||||||||||||    
T  5367219 cataattcagtgtaattatatgtgtcggtgtcg 5367251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 12668455 - 12668419
Alignment:
Q  1 cataattcagtgtatttatatgtgtcggtgtcgtgtc 37  Q
    |||||||||||||| ||||| ||||||||||||||||    
T  12668455 cataattcagtgtaattataagtgtcggtgtcgtgtc 12668419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 20242759 - 20242727
Alignment:
Q  1 cataattcagtgtatttatatgtgtcggtgtcg 33  Q
    |||||||||||||| ||||||||||||||||||    
T  20242759 cataattcagtgtaattatatgtgtcggtgtcg 20242727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 53; Significance: 3e-21; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 16766724 - 16766827
Alignment:
Q  1 cataattcagtgtatttatatgtgtcggtgtcgtgtcagtgtcggtcacaacacgtgtctgaccccaggacacgcctaatccaaataaatgtccgtgttt 100  Q
    |||||||||||||| ||| | |||||||||||||||| ||||||| ||||||||||||| ||| || ||||||||||||||| ||  |||||||||| ||    
T  16766724 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacaacacgtgtccgacaccgggacacgcctaatccgaa-gaatgtccgtgctt 16766822  T
Q  101 catag 105  Q
    |||||    
T  16766823 catag 16766827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 8 - 84
Target Start/End: Complemental strand, 16488615 - 16488539
Alignment:
Q  8 cagtgtatttatatgtgtcggtgtcgtgtcagtgtcggtcacaacacgtgtctgaccccaggacacgcctaatccaa 84  Q
    ||||||| |||||||||||||||||||||| ||||||| ||| ||||||||||| | |  |||||||||| ||||||    
T  16488615 cagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgacacgtgtctggcacggggacacgccttatccaa 16488539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 8 - 84
Target Start/End: Original strand, 18367870 - 18367946
Alignment:
Q  8 cagtgtatttatatgtgtcggtgtcgtgtcagtgtcggtcacaacacgtgtctgaccccaggacacgcctaatccaa 84  Q
    ||||||| |||||||||||||||||||||| ||||| | ||| |||| |||||||| |  |||||||||| ||||||    
T  18367870 cagtgtaattatatgtgtcggtgtcgtgtcggtgtcagacacgacacatgtctgacacggggacacgccttatccaa 18367946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 9107399 - 9107321
Alignment:
Q  4 aattcagtgtatttatatgtgtcggtgtcgtgtcagtgtcggtcacaacacgtgtctgaccccaggacacgcctaatcc 82  Q
    ||||||||||| ||| | |||||||||||||||| ||||||| ||||||  ||||| ||| || |||||| ||||||||    
T  9107399 aattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacaacgtgtgtccgacaccgggacacacctaatcc 9107321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 9522918 - 9523004
Alignment:
Q  1 cataattcagtgtatttatatgtgtcggtgtcgtgtcagtgtcggtcacaacacgtgtctgaccccaggacacgcctaatccaaata 87  Q
    |||||||||||||| ||| | |||||||||| ||||| |||||||   | ||||||||| ||| ||  |||||||||||||||||||    
T  9522918 cataattcagtgtaattacaagtgtcggtgttgtgtcggtgtcggatccgacacgtgtccgacaccgagacacgcctaatccaaata 9523004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 8365551 - 8365470
Alignment:
Q  1 cataattcagtgtatttatatgtgtcggtgtcgtgtcagtgtcggtcacaacacgtgtctgaccccaggacacgcctaatcc 82  Q
    |||||||| ||||| ||| | |||||||||||||||| || |||| ||| ||||||||| ||| |  |||||||||||||||    
T  8365551 cataattcggtgtaattacaagtgtcggtgtcgtgtcggtatcggacacgacacgtgtccgacactgggacacgcctaatcc 8365470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 22 - 82
Target Start/End: Original strand, 3209436 - 3209496
Alignment:
Q  22 gtgtcggtgtcgtgtcagtgtcggtcacaacacgtgtctgaccccaggacacgcctaatcc 82  Q
    |||||||||||||||||||||||  ||| ||||| ||| ||| || |||||||||||||||    
T  3209436 gtgtcggtgtcgtgtcagtgtcgaacacgacacgcgtccgacacccggacacgcctaatcc 3209496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 9025526 - 9025490
Alignment:
Q  1 cataattcagtgtatttatatgtgtcggtgtcgtgtc 37  Q
    |||||||||||||| ||||||||||||||||||||||    
T  9025526 cataattcagtgtaattatatgtgtcggtgtcgtgtc 9025490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 26562716 - 26562759
Alignment:
Q  1 cataattcagtgtatttatatgtgtcggtgtcgtgtcagtgtcg 44  Q
    |||||||||||||| |||||||||||| ||||||||| ||||||    
T  26562716 cataattcagtgtaattatatgtgtcgatgtcgtgtcggtgtcg 26562759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 31384947 - 31385029
Alignment:
Q  1 cataattcagtgtatttatatgtgtcggtgtcgtgtcagtgtcggtcacaacacgtgtctgaccccaggacacgcctaatccaa 84  Q
    |||||||||||||| ||| | ||||| ||||||||| ||||| || ||| |||||||||  || || |||||||||||||||||    
T  31384947 cataattcagtgtaattacaagtgtcagtgtcgtgt-agtgttggacacgacacgtgtcctacaccgggacacgcctaatccaa 31385029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 34073379 - 34073337
Alignment:
Q  1 cataattcagtgtatttatatgtgtcggtgtcgtgtcagtgtc 43  Q
    |||||||||||||| ||||||| |||||||||||||| |||||    
T  34073379 cataattcagtgtaattatatgggtcggtgtcgtgtcggtgtc 34073337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 34868818 - 34868760
Alignment:
Q  1 cataattcagtgtatttatatgtgtcggtgtcgtgtcagtgtcggtcacaacacgtgtc 59  Q
    |||||||||||||| |||||||| |  ||||||||||||||| ||  ||||||||||||    
T  34868818 cataattcagtgtaattatatgtcttagtgtcgtgtcagtgttggatacaacacgtgtc 34868760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 10339158 - 10339077
Alignment:
Q  1 cataattcagtgt-atttatatgtgtcggtgtcgtgtcagtgtcggtcacaacacgtgtctgaccccaggacacgcctaatc 81  Q
    ||||||||||||| | ||||||||||| ||| |||||| ||||||| ||| |||| |||| ||| |  ||||||||||||||    
T  10339158 cataattcagtgttaattatatgtgtcagtgccgtgtcggtgtcggacacgacacatgtccgacactgggacacgcctaatc 10339077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 7027269 - 7027301
Alignment:
Q  1 cataattcagtgtatttatatgtgtcggtgtcg 33  Q
    |||||||||||||| ||||||||||||||||||    
T  7027269 cataattcagtgtaattatatgtgtcggtgtcg 7027301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 7265625 - 7265593
Alignment:
Q  1 cataattcagtgtatttatatgtgtcggtgtcg 33  Q
    |||||||||||||| ||||||||||||||||||    
T  7265625 cataattcagtgtaattatatgtgtcggtgtcg 7265593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 9027205 - 9027241
Alignment:
Q  1 cataattcagtgtatttatatgtgtcggtgtcgtgtc 37  Q
    |||||||| ||||| ||||||||||||||||||||||    
T  9027205 cataattccgtgtaattatatgtgtcggtgtcgtgtc 9027241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 17302584 - 17302687
Alignment:
Q  1 cataattcagtgtatttatatgtgtcggtgtcgtgtcagtgtcggtcacaacacgtgtctgaccccaggacacgcctaatccaaataaatgtccgtgttt 100  Q
    ||||||||| |||| ||| | |||||  |||||||||||| |  | ||||||||||||| |||  | | |||| |||||||||||  |||||||||||||    
T  17302584 cataattcaatgtaattacaagtgtcattgtcgtgtcagtattagacacaacacgtgtccgacatcggaacacacctaatccaaa-gaatgtccgtgttt 17302682  T
Q  101 catag 105  Q
    |||||    
T  17302683 catag 17302687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 21395340 - 21395296
Alignment:
Q  1 cataattcagtgtatttatatgtgtcggtgtcgtgtcagtgtcgg 45  Q
    ||||||| |||||| ||| | ||||||||||||||||||||||||    
T  21395340 cataatttagtgtaattacaagtgtcggtgtcgtgtcagtgtcgg 21395296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 2e-16; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 8 - 84
Target Start/End: Original strand, 6401532 - 6401608
Alignment:
Q  8 cagtgtatttatatgtgtcggtgtcgtgtcagtgtcggtcacaacacgtgtctgaccccaggacacgcctaatccaa 84  Q
    ||||||| |||||||||||||||||||||||||||||| ||| ||||||||||||| |  ||| |||||| ||||||    
T  6401532 cagtgtaattatatgtgtcggtgtcgtgtcagtgtcggacacgacacgtgtctgacacggggatacgccttatccaa 6401608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 4 - 59
Target Start/End: Original strand, 3966533 - 3966588
Alignment:
Q  4 aattcagtgtatttatatgtgtcggtgtcgtgtcagtgtcggtcacaacacgtgtc 59  Q
    ||||||||||| |||||||||||||||||||||||||||||| ||||||| |||||    
T  3966533 aattcagtgtaattatatgtgtcggtgtcgtgtcagtgtcggacacaacatgtgtc 3966588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 18592100 - 18592179
Alignment:
Q  1 cataattcagtgtatttatatgtgtcggtgtcgtgtcagtgtcggtcacaacacgtgtctgaccccaggacacgcctaat 80  Q
    ||||||||| |||| ||||||||| |||||||||||| ||||||| |||||||||||||||||  | ||||||| |||||    
T  18592100 cataattcaatgtaattatatgtgccggtgtcgtgtcggtgtcggacacaacacgtgtctgacatcgggacacggctaat 18592179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 21542057 - 21542140
Alignment:
Q  1 cataattcagtgtatttatatgtgtcggtgtcgtgtcagtgtcggtcacaacacgtgtctgaccccaggacacgcctaatccaa 84  Q
    |||||||||||||| ||| | |||||||||||||||| ||||||| ||| ||||||||| ||| || ||||||||| |||||||    
T  21542057 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacgacacgtgtccgacaccgggacacgccgaatccaa 21542140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 21522777 - 21522861
Alignment:
Q  1 cataattcagtgtatttatatgtgtcggtgtcgtgtcagtgtcggtcacaacacgtgtctgaccccaggacacgcctaatccaaa 85  Q
    |||||||||||||| ||| |  ||||||||||||||| ||||||| ||| ||||||||| | | || ||||||||||||||||||    
T  21522777 cataattcagtgtaattacaattgtcggtgtcgtgtcggtgtcggacacgacacgtgtccggcaccgggacacgcctaatccaaa 21522861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 21533343 - 21533427
Alignment:
Q  1 cataattcagtgtatttatatgtgtcggtgtcgtgtcagtgtcggtcacaacacgtgtctgaccccaggacacgcctaatccaaa 85  Q
    |||||||||||||| ||| |  ||||||||||||||| ||||||| ||| ||||||||| | | || ||||||||||||||||||    
T  21533343 cataattcagtgtaattacaattgtcggtgtcgtgtcggtgtcggacacgacacgtgtccggcaccgggacacgcctaatccaaa 21533427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 8 - 84
Target Start/End: Original strand, 21814295 - 21814371
Alignment:
Q  8 cagtgtatttatatgtgtcggtgtcgtgtcagtgtcggtcacaacacgtgtctgaccccaggacacgcctaatccaa 84  Q
    ||||||| |||||||||||||||||||||| ||||||| ||| ||||||||||| | |  |||||||||| ||||||    
T  21814295 cagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgacacgtgtctggcacggggacacgccttatccaa 21814371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 202 - 349
Target Start/End: Original strand, 7298086 - 7298238
Alignment:
Q  202 agcctcaacttcttcataatttcaccttactaattatgttggacttgaaacttcaccctgctacacctcgaca---tatctactatatcag-actgcctt 297  Q
    ||||||||| ||||||| |||||| ||||||| ||||||||||||| ||||| |||| || || || || |||   ||||| ||||||||| | |||| |    
T  7298086 agcctcaacctcttcattatttcagcttactagttatgttggacttaaaactccaccttgataaacatcaacatattatctgctatatcagtattgccat 7298185  T
Q  298 tcactgctaacaaaaacctgctgcaaagtaaactta-aaacatattgcaggcc 349  Q
    || |||||||||||||||||  | ||| |||||||| |  |||||||||||||    
T  7298186 tcgctgctaacaaaaacctgaggtaaactaaacttataggcatattgcaggcc 7298238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 30098353 - 30098434
Alignment:
Q  1 cataattcagtgtatttatatgtgtcggtgtcgtgtcagtgtcggtcacaacacgtgtctgaccccaggacacgcctaatcc 82  Q
    ||||||||| |||| |||||  ||||||| ||| ||||||||||| ||| ||||||||| ||| ||||||||| ||||||||    
T  30098353 cataattcaatgtaattatagatgtcggtatcgagtcagtgtcggacacgacacgtgtcagacaccaggacacacctaatcc 30098434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 19579728 - 19579809
Alignment:
Q  1 cataattcagtgtatttatatgtgtcggtgtcgtgtcagtgtcggtcacaacacgtgtctgaccccaggacacgcctaatcc 82  Q
    ||||||| |||| | ||| | |||||||||||||||||||||||| ||| |||  ||||| || || |||||||||||||||    
T  19579728 cataatttagtgcaattacaagtgtcggtgtcgtgtcagtgtcggacacgacatatgtctaacaccgggacacgcctaatcc 19579809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 41091289 - 41091245
Alignment:
Q  1 cataattcagtgtatttatatgtgtcggtgtcgtgtcagtgtcgg 45  Q
    |||||||||||||| |||||||||||| |||||||||| ||||||    
T  41091289 cataattcagtgtaattatatgtgtcgatgtcgtgtcaatgtcgg 41091245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 11685966 - 11686023
Alignment:
Q  1 cataattcagtgtatttatatgtgtcggtgtcgtgtcagtgtcggtcacaacacgtgtc 59  Q
    ||||||| |||||| ||||||||||||||||||| || ||||||| ||| |||||||||    
T  11685966 cataatttagtgtaattatatgtgtcggtgtcgt-tcggtgtcggacacgacacgtgtc 11686023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 7677732 - 7677813
Alignment:
Q  1 cataattcagtgtatttatatgtgtcggtgtcgtgtcagtgtcggtcacaacacgtgtctgaccccaggacacgcctaatcc 82  Q
    |||||||||||| | ||| | |||||||||||||||| ||||| | |||  ||| |||| ||| || |||||||||||||||    
T  7677732 cataattcagtgcaattagaagtgtcggtgtcgtgtcggtgtctgacacgtcacatgtccgacaccgggacacgcctaatcc 7677813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 82
Target Start/End: Complemental strand, 21191067 - 21191018
Alignment:
Q  33 gtgtcagtgtcggtcacaacacgtgtctgaccccaggacacgcctaatcc 82  Q
    ||||| ||||||| ||||||||||||| ||| || |||||||||||||||    
T  21191067 gtgtcggtgtcggacacaacacgtgtccgactccgggacacgcctaatcc 21191018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 37328873 - 37328832
Alignment:
Q  4 aattcagtgtatttatatgtgtcggtgtcgtgtcagtgtcgg 45  Q
    ||||||||||| ||| |||||||||||||||||| |||||||    
T  37328873 aattcagtgtaattacatgtgtcggtgtcgtgtcggtgtcgg 37328832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 39698568 - 39698649
Alignment:
Q  1 cataattcagtgtatttatatgtgtcggtgtcgtgtcagtgtcggtcacaacacgtgtctgaccccaggacacgcctaatcc 82  Q
    |||||||||||||| ||| | ||||| |||||||||| ||||||| ||| ||| || || ||| ||  ||||||||||||||    
T  39698568 cataattcagtgtaattacaagtgtcagtgtcgtgtcggtgtcggacacgacatgtatccgacaccgagacacgcctaatcc 39698649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 16 - 60
Target Start/End: Complemental strand, 19453083 - 19453039
Alignment:
Q  16 ttatatgtgtcggtgtcgtgtcagtgtcggtcacaacacgtgtct 60  Q
    ||||||||||||||||||||||| |||||| ||| |||| |||||    
T  19453083 ttatatgtgtcggtgtcgtgtcaatgtcggacacgacacatgtct 19453039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 45; Significance: 2e-16; HSPs: 11)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 30982910 - 30982826
Alignment:
Q  1 cataattcagtgtatttatatgtgtcggtgtcgtgtcagtgtcggtcacaacacgtgtctgaccccaggacacgcctaatccaaa 85  Q
    |||| ||||||||| ||||| |||||||||||||||| ||||| | ||| ||||||||| ||| || ||||||||||||||||||    
T  30982910 catatttcagtgtaattataagtgtcggtgtcgtgtcggtgtcagacacgacacgtgtccgacaccgggacacgcctaatccaaa 30982826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 22234922 - 22234841
Alignment:
Q  1 cataattcagtgtatttatatgtgtcggtgtcgtgtcagtgtcggtcacaacacgtgtctgaccccaggacacgcctaatcc 82  Q
    |||||||||||||| || ||||||||||||||||||| ||||| | ||| ||||||||| ||| |||||||||  |||||||    
T  22234922 cataattcagtgtaattctatgtgtcggtgtcgtgtcggtgtctgacacgacacgtgtccgacaccaggacacagctaatcc 22234841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 8 - 84
Target Start/End: Complemental strand, 5414197 - 5414121
Alignment:
Q  8 cagtgtatttatatgtgtcggtgtcgtgtcagtgtcggtcacaacacgtgtctgaccccaggacacgcctaatccaa 84  Q
    ||||||| |||||||| ||||||||||||||||||||| ||| ||||||||||||| |  |||||| ||| ||||||    
T  5414197 cagtgtaattatatgtatcggtgtcgtgtcagtgtcggacacgacacgtgtctgacacagggacacaccttatccaa 5414121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 9 - 77
Target Start/End: Complemental strand, 46084015 - 46083947
Alignment:
Q  9 agtgtatttatatgtgtcggtgtcgtgtcagtgtcggtcacaacacgtgtctgaccccaggacacgcct 77  Q
    |||||| ||||||||||||||||||||||||| |||| ||| ||||||||||||| |  ||||||||||    
T  46084015 agtgtaattatatgtgtcggtgtcgtgtcagtatcggacacgacacgtgtctgacgcggggacacgcct 46083947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 2 - 79
Target Start/End: Original strand, 30838238 - 30838315
Alignment:
Q  2 ataattcagtgtatttatatgtgtcggtgtcgtgtcagtgtcggtcacaacacgtgtctgaccccaggacacgcctaa 79  Q
    |||||| |||||| ||||| || ||||||||||||||||||||| | | ||||||||| ||| ||| |||||||||||    
T  30838238 ataatttagtgtaattataagtatcggtgtcgtgtcagtgtcggacgcgacacgtgtccgacaccaagacacgcctaa 30838315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 24 - 82
Target Start/End: Complemental strand, 15724563 - 15724505
Alignment:
Q  24 gtcggtgtcgtgtcagtgtcggtcacaacacgtgtctgaccccaggacacgcctaatcc 82  Q
    |||||||||||||| ||||||| ||||||||||||| ||| |||  |||||||||||||    
T  15724563 gtcggtgtcgtgtcggtgtcggacacaacacgtgtcagacaccaaaacacgcctaatcc 15724505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 24613733 - 24613652
Alignment:
Q  1 cataattcagtgtatttatatgtgtcggtgtcgtgtcagtgtcggtcacaacacgtgtctgaccccaggacacgcctaatcc 82  Q
    ||||||||| ||||  || | ||||||||||| |||| ||||| | ||| ||||||||||||| |||||||||| |||||||    
T  24613733 cataattcaatgtaagtacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtctgacaccaggacacgtctaatcc 24613652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 44132674 - 44132614
Alignment:
Q  3 taattcagtgtatttatatgtgtcggtgtcgtgtcagtgtcggtcacaacacgtgtctgac 63  Q
    ||||||||| || |||||||||||||||||||||  ||||||  ||||||| |||||||||    
T  44132674 taattcagtataattatatgtgtcggtgtcgtgttggtgtcgaacacaacatgtgtctgac 44132614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 5225645 - 5225565
Alignment:
Q  1 cataattcagtgtatttatatgtgtcggtgtcgtgtcagtgtcggtcacaacacgtgtctgaccccaggacacgcctaatc 81  Q
    ||||||||| || | | |||||||||||||||||||  ||||||| ||| | || | || |||||| ||||||||||||||    
T  5225645 cataattcaatgcaataatatgtgtcggtgtcgtgttggtgtcggacacgatacatatcggaccccgggacacgcctaatc 5225565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 2 - 81
Target Start/End: Complemental strand, 28000773 - 28000693
Alignment:
Q  2 ataattcagtgtatttatatgtgtcggtgtcgtgtc-agtgtcggtcacaacacgtgtctgaccccaggacacgcctaatc 81  Q
    ||||||||||||| ||| | ||||||||||| |||| ||||| | |||| ||||||||||||| ||  ||||| |||||||    
T  28000773 ataattcagtgtaattacaagtgtcggtgtcatgtcaagtgttgttcacgacacgtgtctgacaccgagacacacctaatc 28000693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 46160923 - 46160959
Alignment:
Q  1 cataattcagtgtatttatatgtgtcggtgtcgtgtc 37  Q
    |||||||||||||  ||||||||||||||||||||||    
T  46160923 cataattcagtgttattatatgtgtcggtgtcgtgtc 46160959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 9)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 24339669 - 24339750
Alignment:
Q  1 cataattcagtgtatttatatgtgtcggtgtcgtgtcagtgtcggtcacaacacgtgtctgaccccaggacacgcctaatcc 82  Q
    |||||||||||||| ||| | |||||||||||||||| ||||||| ||| |||||| || ||| || |||||||||||||||    
T  24339669 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacgacacgtatccgacaccgggacacgcctaatcc 24339750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 3 - 81
Target Start/End: Complemental strand, 6630942 - 6630864
Alignment:
Q  3 taattcagtgtatttatatgtgtcggtgtcgtgtcagtgtcggtcacaacacgtgtctgaccccaggacacgcctaatc 81  Q
    |||||||||||| |||||||||||| ||||||||  ||||||| ||||||||||| | ||| ||| ||||| |||||||    
T  6630942 taattcagtgtaattatatgtgtcgatgtcgtgttggtgtcggacacaacacgtgcccgacaccaagacacacctaatc 6630864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 22602742 - 22602706
Alignment:
Q  1 cataattcagtgtatttatatgtgtcggtgtcgtgtc 37  Q
    |||||||||||||| ||||||||||||||||||||||    
T  22602742 cataattcagtgtaattatatgtgtcggtgtcgtgtc 22602706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 59
Target Start/End: Complemental strand, 26329411 - 26329356
Alignment:
Q  4 aattcagtgtatttatatgtgtcggtgtcgtgtcagtgtcggtcacaacacgtgtc 59  Q
    ||||||||||| ||||||||||||| |||||||| ||||| | ||| |||||||||    
T  26329411 aattcagtgtaattatatgtgtcggcgtcgtgtcggtgtcagacacgacacgtgtc 26329356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 39 - 84
Target Start/End: Original strand, 9778559 - 9778604
Alignment:
Q  39 gtgtcggtcacaacacgtgtctgaccccaggacacgcctaatccaa 84  Q
    ||||||| ||||||||||||| ||| || |||||||||||||||||    
T  9778559 gtgtcggacacaacacgtgtccgacaccgggacacgcctaatccaa 9778604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 105
Target Start/End: Original strand, 25822685 - 25822785
Alignment:
Q  4 aattcagtgtatttatatgtgtcggtgtcgtgtcagtgtcggtcacaacacgtgtctgaccccaggacacgcctaatccaaataaatgtccgtgtttcat 103  Q
    ||||||||||| ||| | ||||||||||||| || || |||| ||| |||||||||||||  | ||||| |||||||| ||  |  ||||||||||||||    
T  25822685 aattcagtgtaattacaagtgtcggtgtcgtatcggtatcggacacgacacgtgtctgacatcgggacatgcctaatctaaggag-tgtccgtgtttcat 25822783  T
Q  104 ag 105  Q
    ||    
T  25822784 ag 25822785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 7328723 - 7328687
Alignment:
Q  1 cataattcagtgtatttatatgtgtcggtgtcgtgtc 37  Q
    ||||||| |||||| ||||||||||||||||||||||    
T  7328723 cataatttagtgtaattatatgtgtcggtgtcgtgtc 7328687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 17307920 - 17307956
Alignment:
Q  1 cataattcagtgtatttatatgtgtcggtgtcgtgtc 37  Q
    |||||||||||||| |||||||||| |||||||||||    
T  17307920 cataattcagtgtaattatatgtgttggtgtcgtgtc 17307956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 18013106 - 18013070
Alignment:
Q  1 cataattcagtgtatttatatgtgtcggtgtcgtgtc 37  Q
    |||||||||||||| ||||||||||| ||||||||||    
T  18013106 cataattcagtgtaattatatgtgtcagtgtcgtgtc 18013070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 19)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 9828071 - 9828152
Alignment:
Q  1 cataattcagtgtatttatatgtgtcggtgtcgtgtcagtgtcggtcacaacacgtgtctgaccccaggacacgcctaatcc 82  Q
    |||||||||||||| || ||||||||||||||||||| ||||| | ||| ||||||||| ||| || ||||||| |||||||    
T  9828071 cataattcagtgtaattttatgtgtcggtgtcgtgtccgtgtcagacacgacacgtgtccgacaccgggacacgtctaatcc 9828152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 47989524 - 47989605
Alignment:
Q  1 cataattcagtgtatttatatgtgtcggtgtcgtgtcagtgtcggtcacaacacgtgtctgaccccaggacacgcctaatcc 82  Q
    |||||||||||||| ||| | |||||||||||||||| ||||||| ||| |||| ||||||||  | |||||||||||||||    
T  47989524 cataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacgacacatgtctgacatcgggacacgcctaatcc 47989605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 6612203 - 6612120
Alignment:
Q  1 cataattcagtgtatttatatgtgtcggtgtcgtgtcagtgtcggtcacaacacgtgtctgaccccaggacacgcctaatccaa 84  Q
    |||||||||||||| ||| | ||||||||||||||||  |||||| ||| | | ||||| ||| ||||||||||||||||||||    
T  6612203 cataattcagtgtaattacaagtgtcggtgtcgtgtcgatgtcggacacgatatgtgtccgacaccaggacacgcctaatccaa 6612120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 5944310 - 5944391
Alignment:
Q  1 cataattcagtgtatttatatgtgtcggtgtcgtgtcagtgtcggtcacaacacgtgtctgaccccaggacacgcctaatcc 82  Q
    |||||||||||||| ||||| ||||||||||||||||  || ||| |||||||| |||| ||| || ||| |||||||||||    
T  5944310 cataattcagtgtaattataagtgtcggtgtcgtgtcgatgacggacacaacacatgtccgacaccgggatacgcctaatcc 5944391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 44482257 - 44482310
Alignment:
Q  1 cataattcagtgtatttatatgtgtcggtgtcgtgtcagtgtcggtcacaacac 54  Q
    |||||||||||||| |||||||||||||||||||||| ||||||| ||| ||||    
T  44482257 cataattcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgacac 44482310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 8 - 84
Target Start/End: Original strand, 25934650 - 25934726
Alignment:
Q  8 cagtgtatttatatgtgtcggtgtcgtgtcagtgtcggtcacaacacgtgtctgaccccaggacacgcctaatccaa 84  Q
    ||||||| |||||||||||||| ||||||| ||||||| ||| ||||||||||||| |  ||| |||||| ||||||    
T  25934650 cagtgtaattatatgtgtcggtatcgtgtcggtgtcggacacgacacgtgtctgacacggggatacgccttatccaa 25934726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 34371740 - 34371798
Alignment:
Q  1 cataattcagtgtatttatatgtgtcggtgtcgtgtcagtgtcggtcacaacacgtgtc 59  Q
    |||||||||||||| |||||||||||||||||||||  |||||||  || |||||||||    
T  34371740 cataattcagtgtaattatatgtgtcggtgtcgtgttggtgtcggatacgacacgtgtc 34371798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 16164347 - 16164266
Alignment:
Q  1 cataattcagtgtatttatatgtgtcggtgtcgtgtcagtgtcggtcacaacacgtgtctgaccccaggacacgcctaatcc 82  Q
    ||||||| | |||| |||||||||||  ||||||||  |||| || | ||||||||||| ||| ||||||||||||||||||    
T  16164347 cataatttaatgtaattatatgtgtcattgtcgtgttggtgttggacgcaacacgtgtccgacaccaggacacgcctaatcc 16164266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 25361913 - 25361957
Alignment:
Q  1 cataattcagtgtatttatatgtgtcggtgtcgtgtcagtgtcgg 45  Q
    |||||||||||||| ||||||||||| |||||||||| |||||||    
T  25361913 cataattcagtgtaattatatgtgtcagtgtcgtgtcggtgtcgg 25361957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 1486741 - 1486666
Alignment:
Q  1 cataattcagtgtatttatatgtgtcggtgtcgtgtcagtgtcggtcacaacacgtgtctgaccccaggacacgcctaatcc 82  Q
    |||||||||||||| ||||| ||||||||||||      |||||| ||| ||||||||| ||| || |||||||||||||||    
T  1486741 cataattcagtgtaattataagtgtcggtgtcg------tgtcggacacgacacgtgtccgacaccgggacacgcctaatcc 1486666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 30173794 - 30173716
Alignment:
Q  1 cataattcagtgtatttatatgtgtcggtgtcgtgtcagtgtcggtcacaacacgtgtctgaccccaggacacgcctaa 79  Q
    ||||| |||||||| ||| | |||||||||||||||| || |||| ||| |||| |||| ||| | |||||||||||||    
T  30173794 cataactcagtgtaattacaagtgtcggtgtcgtgtccgtatcggacacgacacatgtccgactctaggacacgcctaa 30173716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 40917779 - 40917857
Alignment:
Q  4 aattcagtgtatttatatgtgtcggtgtcgtgtcagtgtcggtcacaacacgtgtctgaccccaggacacgcctaatcc 82  Q
    |||| |||||| ||| | || ||||||||||||| |||| || ||| ||||||||| ||| || |||||||||||||||    
T  40917779 aattaagtgtaattacaagtctcggtgtcgtgtcggtgttggacacgacacgtgtccgacaccgggacacgcctaatcc 40917857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 7918243 - 7918206
Alignment:
Q  1 cataattcagtgtatttatatgtgtcggtgtcgtgtca 38  Q
    |||||||||||||| ||||||||||| |||||||||||    
T  7918243 cataattcagtgtaattatatgtgtcagtgtcgtgtca 7918206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 31694742 - 31694689
Alignment:
Q  1 cataattcagtgtatttatatgtgtcggtgtcgtgtcagtgtcggtcacaacac 54  Q
    ||||||||||| || ||| | |||||||||||||||| ||||||| ||||||||    
T  31694742 cataattcagtataattacaagtgtcggtgtcgtgtcggtgtcggacacaacac 31694689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 2 - 74
Target Start/End: Complemental strand, 9629931 - 9629859
Alignment:
Q  2 ataattcagtgtatttatatgtgtcggtgtcgtgtcagtgtcggtcacaacacgtgtctgaccccaggacacg 74  Q
    ||||||||||||  ||||| ||||||||||||||||  |||||| ||| |||| |||| ||| || |||||||    
T  9629931 ataattcagtgtgattataagtgtcggtgtcgtgtcgatgtcggacacgacacatgtccgacaccgggacacg 9629859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 20157382 - 20157346
Alignment:
Q  1 cataattcagtgtatttatatgtgtcggtgtcgtgtc 37  Q
    |||||||||||||| | ||||||||||||||||||||    
T  20157382 cataattcagtgtaatcatatgtgtcggtgtcgtgtc 20157346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 30749867 - 30749899
Alignment:
Q  1 cataattcagtgtatttatatgtgtcggtgtcg 33  Q
    |||||||||||||| ||||||||||||||||||    
T  30749867 cataattcagtgtaattatatgtgtcggtgtcg 30749899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 30771318 - 30771350
Alignment:
Q  1 cataattcagtgtatttatatgtgtcggtgtcg 33  Q
    |||||||||||||| ||||||||||||||||||    
T  30771318 cataattcagtgtaattatatgtgtcggtgtcg 30771350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 33 - 105
Target Start/End: Complemental strand, 32461464 - 32461393
Alignment:
Q  33 gtgtcagtgtcggtcacaacacgtgtctgaccccaggacacgcctaatccaaataaatgtccgtgtttcatag 105  Q
    ||||| ||||||| ||| ||||||||||||| |  ||||||||||||||| || || |||||||| |||||||    
T  32461464 gtgtcggtgtcggacacgacacgtgtctgacactgggacacgcctaatcc-aagaagtgtccgtgcttcatag 32461393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 13)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 26902207 - 26902147
Alignment:
Q  1 cataattcagtgtatttatatgtgtcggtgtcgtgtcagtgtcggtcacaacacgtgtctg 61  Q
    |||||||||||||| ||||||||||||||||||| | |||||||| ||| |||||||||||    
T  26902207 cataattcagtgtaattatatgtgtcggtgtcgtatgagtgtcggacacgacacgtgtctg 26902147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 28385026 - 28384942
Alignment:
Q  1 cataattcagtgtatttatatgtgtcggtgtcgtgtcagtgtcggtcac-aacacgtgtctgaccccaggacacgcctaatccaa 84  Q
    |||||||||||||| ||||||||||||||||| |||||||||| | |||  |||| |||||||  |||||| |||||||||||||    
T  28385026 cataattcagtgtaattatatgtgtcggtgtcatgtcagtgtcagacacgtacacatgtctgatgccaggatacgcctaatccaa 28384942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 29447142 - 29447061
Alignment:
Q  1 cataattcagtgtatttatatgtgtcggtgtcgtgtcagtgtcggtcacaacacgtgtctgaccccaggacacgcctaatcc 82  Q
    ||||||||| ||||  || | ||||||||||| |||| ||||||| ||| ||| ||||||||| ||||||||||||||||||    
T  29447142 cataattcaatgtaactacaagtgtcggtgtcatgtcggtgtcggacacgacatgtgtctgacaccaggacacgcctaatcc 29447061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 15816161 - 15816080
Alignment:
Q  1 cataattcagtgtatttatatgtgtcggtgtcgtgtcagtgtcggtcacaacacgtgtctgaccccaggacacgcctaatcc 82  Q
    ||||||| |||||| ||||| |||||||||||||||  ||||||| ||| |||||  || ||| || |||||||||||||||    
T  15816161 cataatttagtgtaattataagtgtcggtgtcgtgttggtgtcggacacgacacgaatccgacaccgggacacgcctaatcc 15816080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 12570540 - 12570461
Alignment:
Q  1 cataattcagtgtatttatatgtgtcggtgtcgtgtcagtgtcggtcacaacacgtgtctgaccccaggacacgcctaatc 81  Q
    ||||||| |||||| |||||||||||| ||| || || ||||| | ||| ||||||||| ||| |||||||||||||||||    
T  12570540 cataattaagtgtaattatatgtgtcgatgt-gtatcggtgtcagacactacacgtgtccgacaccaggacacgcctaatc 12570461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 11927118 - 11927083
Alignment:
Q  1 cataattcagtgtatttatatgtgtcggtgtcgtgt 36  Q
    |||||||||||||| |||||||||||||||||||||    
T  11927118 cataattcagtgtaattatatgtgtcggtgtcgtgt 11927083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 2572088 - 2572030
Alignment:
Q  1 cataattcagtgtatttatatgtgtcggtgtcgtgtcagtgtcggtcacaacacgtgtc 59  Q
    ||||||| |||||| ||| | |||||||||||||||| ||||||| ||| |||||||||    
T  2572088 cataatttagtgtaattacaagtgtcggtgtcgtgtctgtgtcggacacgacacgtgtc 2572030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 22652003 - 22652084
Alignment:
Q  1 cataattcagtgtatttatatgtgtcggtgtcgtgtcagtgtcggtcacaacacgtgtctgaccccaggacacgcctaatcc 82  Q
    ||||||||| | || ||| | |||||||||||||||| ||||||| ||| ||| ||||| ||| || ||||||| |||||||    
T  22652003 cataattcaatataattacaagtgtcggtgtcgtgtcggtgtcggacacgacatgtgtccgacaccgggacacgtctaatcc 22652084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 84
Target Start/End: Complemental strand, 34451062 - 34450981
Alignment:
Q  8 cagtgtatttatatgtgtcggtgtcgtgtca-----gtgtcggtcacaacacgtgtctgaccccaggacacgcctaatccaa 84  Q
    ||||||| ||||||||||||||||||||||      ||||||| ||| ||||||||||||| |  |||||||||| ||||||    
T  34451062 cagtgtaattatatgtgtcggtgtcgtgtcgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaa 34450981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 4786370 - 4786338
Alignment:
Q  1 cataattcagtgtatttatatgtgtcggtgtcg 33  Q
    |||||||||||||| ||||||||||||||||||    
T  4786370 cataattcagtgtaattatatgtgtcggtgtcg 4786338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 8847283 - 8847315
Alignment:
Q  1 cataattcagtgtatttatatgtgtcggtgtcg 33  Q
    |||||||||||||| ||||||||||||||||||    
T  8847283 cataattcagtgtaattatatgtgtcggtgtcg 8847315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 12570766 - 12570687
Alignment:
Q  1 cataattcagtgtatttatatgtgtcggtgtcgtgtcagtgtcggtcacaacacgtgtctgaccccaggacacgcctaatc 81  Q
    ||||||| |||||| |||||| ||| ||||| || || ||||| | ||| ||||||||| ||| |||||||||||||||||    
T  12570766 cataattaagtgtaattatatatgttggtgt-gtatcggtgtcagacactacacgtgtccgacaccaggacacgcctaatc 12570687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 29447471 - 29447551
Alignment:
Q  1 cataattcagtgtatttatatgtgtcggtgtcgtgtcagtgtcggtcacaacacgtgtctgaccccaggacacgcctaatc 81  Q
    ||||||| |||||| |||||||||| ||||||||||| ||||| | ||| ||| ||||| ||| || ||||| | ||||||    
T  29447471 cataattaagtgtaattatatgtgttggtgtcgtgtcggtgtcagacacgacatgtgtccgacaccgggacaggtctaatc 29447551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 44557 - 44499
Alignment:
Q  1 cataattcagtgtatttatatgtgtcggtgtcgtgtcagtgtcggtcacaacacgtgtc 59  Q
    |||||||||||||| |||||||||||||| ||||||| |||| || |||||||||||||    
T  44557 cataattcagtgtaattatatgtgtcggtatcgtgtcggtgttggacacaacacgtgtc 44499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 241621 - 241702
Alignment:
Q  1 cataattcagtgtatttatatgtgtcggtgtcgtgtcagtgtcggtcacaacacgtgtctgaccccaggacacgcctaatcc 82  Q
    ||||||| |||||| ||||  |||||||||||||||  ||||||| ||| ||||||||| ||| || |||||||||||||||    
T  241621 cataatttagtgtaattatgagtgtcggtgtcgtgttggtgtcggacacgacacgtgtccgacaccgggacacgcctaatcc 241702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 37; Significance: 0.00000000001; HSPs: 16)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 8039866 - 8039786
Alignment:
Q  2 ataattcagtgtatttatatgtgtcggtgtcgtgtcagtgtcggtcacaacacgtgtctgaccccaggacacgcctaatcc 82  Q
    ||||||||||||| |||||||||||||||||||||| ||||||| ||  | || |||| ||| || |||||||| ||||||    
T  8039866 ataattcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacatgagacatgtccgacaccgggacacgcttaatcc 8039786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 17005650 - 17005570
Alignment:
Q  2 ataattcagtgtatttatatgtgtcggtgtcgtgtcagtgtcggtcacaacacgtgtctgaccccaggacacgcctaatcc 82  Q
    ||||||||||||| ||||| |||||||||| ||||  ||||| | || |||||||||||||| |||||||||  |||||||    
T  17005650 ataattcagtgtaattataagtgtcggtgttgtgttggtgtcagacataacacgtgtctgacaccaggacacctctaatcc 17005570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 85
Target Start/End: Complemental strand, 15796325 - 15796242
Alignment:
Q  2 ataattcagtgtatttatatgtgtcggtgtcgtgtcagtgtcggtcacaacacgtgtctgaccccaggacacgcctaatccaaa 85  Q
    ||||||||||||| ||| |  ||||||||||||||  ||||||| |||||||||||||  || || | ||||||||||||||||    
T  15796325 ataattcagtgtaattacaattgtcggtgtcgtgtaggtgtcggacacaacacgtgtccaacaccggaacacgcctaatccaaa 15796242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 82
Target Start/End: Original strand, 13806278 - 13806344
Alignment:
Q  16 ttatatgtgtcggtgtcgtgtcagtgtcggtcacaacacgtgtctgaccccaggacacgcctaatcc 82  Q
    |||||||||||||||||||||| ||||  | |||||||| || | |||||| |||||||||||||||    
T  13806278 ttatatgtgtcggtgtcgtgtcggtgttagacacaacacatgaccgaccccgggacacgcctaatcc 13806344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 4987323 - 4987242
Alignment:
Q  1 cataattcagtgtatttatatgtgtcggtgtcgtgtcagtgtcggtcacaacacgtgtctgaccccaggacacgcctaatcc 82  Q
    |||||||||||||| ||| | |||| |||| |||||| |||| || ||| ||||||||| ||| || |||||||||||||||    
T  4987323 cataattcagtgtaattacaagtgttggtgacgtgtcggtgttggacacgacacgtgtccgacaccgggacacgcctaatcc 4987242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 14209140 - 14209246
Alignment:
Q  1 cataattcagtgtatttatatgtgtcggtgtcgtgtcagtgtcggtcacaacacgtgtctgaccccaggacacgcctaatccaaataaatgtccgtgttt 100  Q
    |||||||||||||| ||| | ||||| |||||||||| ||||||| ||| ||||||||  |||  | ||| || |||||||| || || |||||||| ||    
T  14209140 cataattcagtgtaattacaagtgtcagtgtcgtgtcggtgtcggacacgacacgtgtacgacatcgggatacacctaatcc-aagaagtgtccgtgctt 14209238  T
Q  101 cataggtt 108  Q
    ||||||||    
T  14209239 cataggtt 14209246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 45
Target Start/End: Original strand, 16789040 - 16789083
Alignment:
Q  2 ataattcagtgtatttatatgtgtcggtgtcgtgtcagtgtcgg 45  Q
    ||||||||||||| ||||| |||| |||||||||||||||||||    
T  16789040 ataattcagtgtaattataagtgttggtgtcgtgtcagtgtcgg 16789083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 10690294 - 10690233
Alignment:
Q  1 cataattcagtgtatttatatgtgtcggtgtcgtgtcagtgtcggtcacaacacgtgtctgac 63  Q
    |||||||||||||| |||||| ||||||| | || | |||||||| |||||||||||||||||    
T  10690294 cataattcagtgtaattatatttgtcggtattgttt-agtgtcggacacaacacgtgtctgac 10690233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 34185152 - 34185074
Alignment:
Q  4 aattcagtgtatttatatgtgtcggtgtcgtgtcagtgtcggtcacaacacgtgtctgaccccaggacacgcctaatcc 82  Q
    ||||||||||| ||| | ||||||||||||||||  |||||| ||  ||| ||||| ||| || |||||||||||||||    
T  34185152 aattcagtgtaattacaagtgtcggtgtcgtgtccatgtcggacaagacatgtgtccgacaccgggacacgcctaatcc 34185074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 107
Target Start/End: Complemental strand, 41961678 - 41961577
Alignment:
Q  5 attcagtgtatttatatgtgtcggtgtcgtgtcagtgtcggtcacaacacgtgtctgaccccaggacacgcctaatccaaataaatgtccgtgtttcata 104  Q
    |||| ||||| ||| | |||||||||||||||| || |||| ||| ||||||||| ||| |  |||||||||||||||  | || |||||||| ||||||    
T  41961678 attcggtgtaattacaagtgtcggtgtcgtgtcggtatcggacacgacacgtgtccgacactgggacacgcctaatcc-gagaagtgtccgtgcttcata 41961580  T
Q  105 ggt 107  Q
    |||    
T  41961579 ggt 41961577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 28812542 - 28812623
Alignment:
Q  1 cataattcagtgtatttatatgtgtcggtgtcgtgtcagtgtcggtcacaacacgtgtctgaccccaggacacgcctaatcc 82  Q
    |||||||||||||| ||| | |||||||||||||||  ||||| | ||| | || |||| |||  |||||||||||||||||    
T  28812542 cataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgtccgacagcaggacacgcctaatcc 28812623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 7928477 - 7928509
Alignment:
Q  1 cataattcagtgtatttatatgtgtcggtgtcg 33  Q
    |||||||||||||| ||||||||||||||||||    
T  7928477 cataattcagtgtaattatatgtgtcggtgtcg 7928509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 14216920 - 14216976
Alignment:
Q  2 ataattcagtgtatttatatgtgtcggtgtcgtgtcagtgtcggtcacaacacgtgt 58  Q
    ||||||||||||| ||| | ||||| ||||||||| |||||||| ||| ||||||||    
T  14216920 ataattcagtgtaattacaagtgtccgtgtcgtgttagtgtcggacacgacacgtgt 14216976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 14223049 - 14223105
Alignment:
Q  2 ataattcagtgtatttatatgtgtcggtgtcgtgtcagtgtcggtcacaacacgtgt 58  Q
    ||||||||||||| ||| | ||||| ||||||||| |||||||| ||| ||||||||    
T  14223049 ataattcagtgtaattacaagtgtccgtgtcgtgttagtgtcggacacgacacgtgt 14223105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 38731245 - 38731277
Alignment:
Q  1 cataattcagtgtatttatatgtgtcggtgtcg 33  Q
    |||||||||||||| ||||||||||||||||||    
T  38731245 cataattcagtgtagttatatgtgtcggtgtcg 38731277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 40993367 - 40993335
Alignment:
Q  1 cataattcagtgtatttatatgtgtcggtgtcg 33  Q
    |||||||||||||| ||||||||||||||||||    
T  40993367 cataattcagtgtaattatatgtgtcggtgtcg 40993335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 53207 - 53290
Alignment:
Q  1 cataattcagtgtatttatatgtgtcggtgtcgtgtcagtgtcggtcacaacacgtgtctgaccccaggacacgcctaatccaa 84  Q
    |||||||||||||| ||||| ||||||||| |||||| ||||||| ||  ||||||||| ||| || |||||||  ||||||||    
T  53207 cataattcagtgtaattataagtgtcggtgccgtgtcggtgtcggacatgacacgtgtccgacaccgggacacgtttaatccaa 53290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 71755 - 71833
Alignment:
Q  4 aattcagtgtatttatatgtgtcggtgtcgtgtcagtgtcggtcacaacacgtgtctgaccccaggacacgcctaatcc 82  Q
    ||||||||||| |||   ||||| |||||||||| ||||||| ||||||||||||| ||| || ||||||| |||||||    
T  71755 aattcagtgtaattactagtgtcagtgtcgtgtcggtgtcggacacaacacgtgtccgacaccgggacacgactaatcc 71833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 10 - 87
Target Start/End: Complemental strand, 84996 - 84919
Alignment:
Q  10 gtgtatttatatgtgtcggtgtcgtgtcagtgtcggtcacaacacgtgtctgaccccaggacacgcctaatccaaata 87  Q
    ||||| |||||| |||||||||| ||||  |||||  ||||||||||||| |||  ||||||||||||||||| ||||    
T  84996 gtgtaattatatatgtcggtgtcatgtcgatgtcgaacacaacacgtgtccgacaacaggacacgcctaatccgaata 84919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 263404 - 263323
Alignment:
Q  1 cataattcagtgtatttatatgtgtcggtgtcgtgtcagtgtcggtcacaacacgtgtctgaccccaggacacgcctaatcc 82  Q
    |||||||||||||| ||||| ||||| |||||||||| ||||| | ||| ||||||||  ||  ||| ||||||||||||||    
T  263404 cataattcagtgtaattataagtgtcagtgtcgtgtcggtgtcagacacgacacgtgttcgataccaagacacgcctaatcc 263323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1300 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold1300
Description:

Target: scaffold1300; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 602 - 686
Alignment:
Q  1 cataattcagtgtatttatatgtgtcggtgtcgtgtcagtgtcggtcacaacacgtgtctgaccccaggacacgcctaatccaaa 85  Q
    |||||||  ||||| |||||| |||| |||||||||||||||||  |||||| ||||||| ||  | || |||||||||||||||    
T  602 cataattatgtgtaattatatatgtcagtgtcgtgtcagtgtcgaacacaacgcgtgtctaacaacgggtcacgcctaatccaaa 686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0623 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 8 - 84
Target Start/End: Complemental strand, 6021 - 5945
Alignment:
Q  8 cagtgtatttatatgtgtcggtgtcgtgtcagtgtcggtcacaacacgtgtctgaccccaggacacgcctaatccaa 84  Q
    ||||||| ||||||||||||||||||| || ||||||  ||| ||||||||||||| |   ||||||||| ||||||    
T  6021 cagtgtaattatatgtgtcggtgtcgtatcggtgtcgaacacgacacgtgtctgacacagagacacgccttatccaa 5945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 9777 - 9717
Alignment:
Q  3 taattcagtgtatttatatgtgtcggtgtcgtgtcagtgtcggtcacaacacgtgtctgac 63  Q
    |||||||||||| |||||||||||||||||||||  ||||| | ||| |||| ||||||||    
T  9777 taattcagtgtaattatatgtgtcggtgtcgtgttggtgtcagacacgacacttgtctgac 9717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 137810 - 137851
Alignment:
Q  4 aattcagtgtatttatatgtgtcggtgtcgtgtcagtgtcgg 45  Q
    ||||||||||| | |||||||| |||||||||||||||||||    
T  137810 aattcagtgtagtcatatgtgttggtgtcgtgtcagtgtcgg 137851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 135344 - 135308
Alignment:
Q  1 cataattcagtgtatttatatgtgtcggtgtcgtgtc 37  Q
    |||||||| ||||| ||||||||||||||||||||||    
T  135344 cataattctgtgtaattatatgtgtcggtgtcgtgtc 135308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 23447 - 23483
Alignment:
Q  1 cataattcagtgtatttatatgtgtcggtgtcgtgtc 37  Q
    |||||||||||||| ||||| ||||||||||||||||    
T  23447 cataattcagtgtaattataagtgtcggtgtcgtgtc 23483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University