View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11720_low_21 (Length: 265)
Name: NF11720_low_21
Description: NF11720
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11720_low_21 |
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Alignment Details
Target: chr8 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 10 - 260
Target Start/End: Original strand, 43281831 - 43282078
Alignment:
| Q |
10 |
tagcaacaataaagcttagcatatagtactactaacatgttaaaaaattgctcgtaacacaaaaagtacaccccataacttctgttaatcacactgttct |
109 |
Q |
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| T |
43281831 |
tagcaacaataaagcttagcatata---ctactaacatgttaaaaaattgctcgtaacacaaaaagtacaccccataacttctgttaatcacactgttct |
43281927 |
T |
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| Q |
110 |
cccaaaggatccagctattttttccttcagaaatactaaaactatacactacactttcattgataattttaagatattaacatttccaaccaccaaaaaa |
209 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43281928 |
cccaaaggatccagctattttttccttcagaaatactaaaactatacactacactttcattgataattttaagatattaacatttccaaccaccaaaaaa |
43282027 |
T |
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| Q |
210 |
taatacacctaaatctgtactaaaatacaaaccccatgggtcctatgcttc |
260 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
43282028 |
taatacacctaaatctgtactaaaatacaaaccccatgggtcctttgcttc |
43282078 |
T |
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