View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11721_low_3 (Length: 828)

Name: NF11721_low_3
Description: NF11721
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11721_low_3
NF11721_low_3
[»] chr3 (82 HSPs)
chr3 (1-247)||(22405451-22405697)
chr3 (468-588)||(22407848-22407968)
chr3 (94-247)||(54261179-54261332)
chr3 (726-809)||(22407990-22408073)
chr3 (118-247)||(48341973-48342102)
chr3 (79-246)||(6462366-6462533)
chr3 (89-247)||(13893879-13894037)
chr3 (89-246)||(25294914-25295071)
chr3 (80-247)||(15320139-15320306)
chr3 (80-247)||(29127872-29128039)
chr3 (123-246)||(29135867-29135990)
chr3 (96-246)||(26207804-26207954)
chr3 (94-247)||(51682955-51683108)
chr3 (127-246)||(42412808-42412927)
chr3 (94-236)||(7328808-7328949)
chr3 (97-246)||(10040511-10040659)
chr3 (126-247)||(45877407-45877528)
chr3 (125-246)||(47303521-47303642)
chr3 (321-385)||(22407365-22407429)
chr3 (94-246)||(29762156-29762308)
chr3 (94-246)||(30767248-30767400)
chr3 (123-247)||(33251615-33251739)
chr3 (123-247)||(49198304-49198428)
chr3 (104-236)||(49543483-49543615)
chr3 (79-246)||(7310689-7310856)
chr3 (80-242)||(28572198-28572360)
chr3 (118-247)||(31072831-31072960)
chr3 (94-247)||(35315909-35316062)
chr3 (118-247)||(41630537-41630666)
chr3 (79-247)||(3136680-3136847)
chr3 (89-228)||(47219116-47219255)
chr3 (80-247)||(47749092-47749258)
chr3 (138-228)||(15795539-15795628)
chr3 (89-247)||(51060277-51060435)
chr3 (118-247)||(10855337-10855465)
chr3 (125-230)||(52364832-52364937)
chr3 (118-201)||(30045820-30045903)
chr3 (127-246)||(39849026-39849144)
chr3 (79-218)||(54237430-54237569)
chr3 (125-246)||(3755524-3755645)
chr3 (123-228)||(3763023-3763127)
chr3 (272-329)||(22406783-22406840)
chr3 (94-246)||(47471786-47471937)
chr3 (147-247)||(49082777-49082877)
chr3 (127-242)||(28242236-28242351)
chr3 (79-201)||(3507519-3507641)
chr3 (84-230)||(53649697-53649843)
chr3 (94-183)||(19146978-19147067)
chr3 (118-247)||(32873574-32873702)
chr3 (118-247)||(35923648-35923777)
chr3 (147-247)||(11687163-11687263)
chr3 (154-236)||(7612987-7613069)
chr3 (103-236)||(4638118-4638251)
chr3 (127-200)||(26043812-26043885)
chr3 (138-246)||(40944837-40944945)
chr3 (94-201)||(7650226-7650333)
chr3 (114-201)||(8362576-8362663)
chr3 (114-201)||(34662340-34662427)
chr3 (147-210)||(40660381-40660444)
chr3 (89-235)||(928565-928711)
chr3 (127-188)||(26362001-26362062)
chr3 (153-246)||(37092565-37092658)
chr3 (146-247)||(46529923-46530024)
chr3 (147-236)||(13167497-13167590)
chr3 (381-421)||(22407761-22407801)
chr3 (138-246)||(41219547-41219654)
chr3 (79-163)||(49021189-49021273)
chr3 (118-201)||(8164552-8164635)
chr3 (89-176)||(35998567-35998654)
chr3 (138-195)||(26590311-26590368)
chr3 (104-201)||(45402362-45402459)
chr3 (98-195)||(50405608-50405705)
chr3 (123-219)||(33688932-33689028)
chr3 (118-246)||(45450472-45450597)
chr3 (94-176)||(2668085-2668167)
chr3 (165-247)||(10043103-10043184)
chr3 (128-178)||(13367446-13367496)
chr3 (118-176)||(43330757-43330815)
chr3 (477-519)||(47764931-47764973)
chr3 (94-183)||(2029268-2029357)
chr3 (147-232)||(6286093-6286177)
chr3 (166-247)||(30735018-30735099)
[»] chr6 (39 HSPs)
chr6 (79-246)||(21898606-21898773)
chr6 (89-247)||(14107353-14107511)
chr6 (89-246)||(13468891-13469048)
chr6 (94-246)||(5253223-5253375)
chr6 (79-236)||(6606082-6606239)
chr6 (89-246)||(29444760-29444917)
chr6 (80-246)||(12606388-12606554)
chr6 (80-246)||(19089456-19089622)
chr6 (94-246)||(13036004-13036156)
chr6 (89-247)||(8611969-8612127)
chr6 (118-246)||(2271327-2271453)
chr6 (80-236)||(30788839-30788993)
chr6 (94-246)||(3601042-3601194)
chr6 (89-239)||(12635779-12635929)
chr6 (124-246)||(24671896-24672018)
chr6 (94-247)||(8938668-8938821)
chr6 (94-235)||(34954619-34954760)
chr6 (89-241)||(8932624-8932776)
chr6 (89-241)||(8944090-8944242)
chr6 (139-246)||(10311514-10311621)
chr6 (121-247)||(19230586-19230710)
chr6 (118-247)||(9179760-9179889)
chr6 (118-247)||(29333163-29333291)
chr6 (89-177)||(9633620-9633708)
chr6 (143-246)||(21016800-21016903)
chr6 (125-247)||(3587976-3588098)
chr6 (126-247)||(9147258-9147379)
chr6 (118-231)||(33939984-33940097)
chr6 (79-196)||(5029825-5029942)
chr6 (169-246)||(5759586-5759663)
chr6 (79-232)||(11142575-11142728)
chr6 (130-246)||(9366459-9366575)
chr6 (169-247)||(3030693-3030771)
chr6 (94-188)||(31129193-31129287)
chr6 (117-178)||(13391312-13391373)
chr6 (89-219)||(13584441-13584575)
chr6 (103-178)||(5333030-5333105)
chr6 (89-162)||(14783415-14783488)
chr6 (80-193)||(30410456-30410569)
[»] chr5 (70 HSPs)
chr5 (79-246)||(5731905-5732072)
chr5 (89-246)||(42086282-42086439)
chr5 (89-246)||(19572679-19572836)
chr5 (89-247)||(1538385-1538543)
chr5 (128-250)||(25417217-25417339)
chr5 (94-246)||(7866536-7866688)
chr5 (94-236)||(8513484-8513626)
chr5 (80-247)||(30349533-30349700)
chr5 (89-247)||(9812826-9812984)
chr5 (94-246)||(20525793-20525945)
chr5 (94-246)||(37263196-37263347)
chr5 (89-247)||(12704968-12705126)
chr5 (89-247)||(41163455-41163612)
chr5 (118-247)||(5079285-5079414)
chr5 (137-246)||(28857083-28857192)
chr5 (79-236)||(38897704-38897860)
chr5 (89-201)||(9805004-9805116)
chr5 (147-247)||(18136333-18136433)
chr5 (89-236)||(12766096-12766243)
chr5 (118-233)||(23247375-23247490)
chr5 (94-236)||(14588617-14588759)
chr5 (94-247)||(23383602-23383764)
chr5 (152-247)||(1898955-1899050)
chr5 (78-245)||(4016239-4016406)
chr5 (89-236)||(13664225-13664372)
chr5 (140-247)||(35403558-35403665)
chr5 (118-236)||(30995086-30995204)
chr5 (127-236)||(7308397-7308506)
chr5 (94-246)||(20682617-20682770)
chr5 (79-247)||(42861203-42861371)
chr5 (114-242)||(9168273-9168399)
chr5 (105-217)||(12081892-12082004)
chr5 (147-236)||(11845854-11845943)
chr5 (118-247)||(26077095-26077224)
chr5 (118-201)||(42291529-42291612)
chr5 (118-247)||(3653938-3654065)
chr5 (118-228)||(15034048-15034158)
chr5 (128-201)||(35006769-35006842)
chr5 (140-242)||(28862784-28862886)
chr5 (118-236)||(17693365-17693475)
chr5 (94-247)||(20255323-20255476)
chr5 (94-247)||(20692887-20693040)
chr5 (118-247)||(35813022-35813151)
chr5 (154-247)||(38297024-38297117)
chr5 (123-243)||(14152008-14152128)
chr5 (117-177)||(24463909-24463969)
chr5 (127-201)||(18262651-18262725)
chr5 (180-246)||(28856932-28856998)
chr5 (185-246)||(6767142-6767203)
chr5 (118-235)||(14974348-14974465)
chr5 (153-246)||(16755016-16755109)
chr5 (105-202)||(19839326-19839423)
chr5 (118-247)||(24498937-24499065)
chr5 (118-247)||(41800931-41801060)
chr5 (94-183)||(43399146-43399235)
chr5 (125-217)||(7336604-7336696)
chr5 (114-218)||(18045622-18045725)
chr5 (123-183)||(35638062-35638122)
chr5 (129-247)||(14728036-14728155)
chr5 (102-201)||(18294492-18294590)
chr5 (126-184)||(40117432-40117490)
chr5 (79-204)||(21375349-21375473)
chr5 (81-194)||(22655145-22655257)
chr5 (129-201)||(38369700-38369771)
chr5 (147-247)||(39728341-39728441)
chr5 (190-249)||(18327722-18327781)
chr5 (94-183)||(21487635-21487721)
chr5 (127-246)||(35561851-35561970)
chr5 (122-247)||(1826811-1826937)
chr5 (138-183)||(25467428-25467473)
[»] chr2 (71 HSPs)
chr2 (79-246)||(7747228-7747395)
chr2 (79-236)||(41220599-41220756)
chr2 (79-231)||(10823029-10823181)
chr2 (118-246)||(42770675-42770803)
chr2 (94-241)||(25540404-25540551)
chr2 (89-246)||(8410085-8410242)
chr2 (79-247)||(2528326-2528494)
chr2 (94-246)||(3643887-3644039)
chr2 (94-246)||(18902530-18902682)
chr2 (79-247)||(38005355-38005523)
chr2 (94-246)||(41031906-41032057)
chr2 (128-247)||(21286397-21286516)
chr2 (94-247)||(12864177-12864330)
chr2 (126-247)||(34356159-34356280)
chr2 (81-246)||(44945548-44945712)
chr2 (94-246)||(10026616-10026768)
chr2 (127-246)||(2550822-2550941)
chr2 (89-246)||(20612529-20612688)
chr2 (100-246)||(331455-331601)
chr2 (89-242)||(22593093-22593244)
chr2 (118-247)||(37560126-37560255)
chr2 (118-247)||(38962716-38962845)
chr2 (94-231)||(28616379-28616516)
chr2 (118-247)||(45263691-45263820)
chr2 (123-247)||(6358180-6358304)
chr2 (118-246)||(7787010-7787138)
chr2 (127-247)||(21180347-21180467)
chr2 (94-246)||(33005706-33005857)
chr2 (94-246)||(44139438-44139590)
chr2 (117-246)||(10106542-10106671)
chr2 (118-247)||(39806909-39807038)
chr2 (94-234)||(9360748-9360888)
chr2 (94-246)||(35946693-35946844)
chr2 (127-246)||(15079437-15079556)
chr2 (127-245)||(41187804-41187922)
chr2 (89-246)||(10046472-10046628)
chr2 (128-241)||(13026445-13026558)
chr2 (118-247)||(24179524-24179650)
chr2 (79-235)||(3811676-3811832)
chr2 (147-247)||(19976860-19976960)
chr2 (79-201)||(12455309-12455431)
chr2 (118-248)||(25549680-25549810)
chr2 (94-235)||(11069843-11069984)
chr2 (94-247)||(14169609-14169762)
chr2 (127-236)||(16034901-16035010)
chr2 (118-247)||(29422168-29422297)
chr2 (103-236)||(39201517-39201650)
chr2 (167-247)||(23500755-23500834)
chr2 (94-193)||(16325602-16325701)
chr2 (151-246)||(37804948-37805043)
chr2 (118-231)||(15234085-15234198)
chr2 (127-243)||(29653584-29653700)
chr2 (118-247)||(34722634-34722762)
chr2 (79-199)||(10669593-10669713)
chr2 (118-178)||(16813189-16813249)
chr2 (118-178)||(16852468-16852528)
chr2 (94-233)||(2784900-2785038)
chr2 (78-176)||(28525439-28525537)
chr2 (94-247)||(5035241-5035394)
chr2 (89-182)||(20116607-20116700)
chr2 (127-188)||(27725952-27726013)
chr2 (114-247)||(14853385-14853520)
chr2 (127-247)||(18649059-18649179)
chr2 (147-246)||(29802765-29802863)
chr2 (140-247)||(2149240-2149348)
chr2 (80-232)||(34346273-34346425)
chr2 (158-236)||(31596496-31596574)
chr2 (166-247)||(13513958-13514039)
chr2 (118-175)||(31740785-31740842)
chr2 (165-242)||(34738395-34738472)
chr2 (121-178)||(43303319-43303376)
[»] chr1 (69 HSPs)
chr1 (94-247)||(5855476-5855629)
chr1 (79-247)||(41663842-41664010)
chr1 (89-246)||(8763946-8764103)
chr1 (89-246)||(43959817-43959974)
chr1 (94-249)||(45361883-45362038)
chr1 (89-247)||(17642000-17642158)
chr1 (94-244)||(26325769-26325919)
chr1 (79-246)||(49078069-49078236)
chr1 (101-247)||(33418123-33418269)
chr1 (94-247)||(10422742-10422895)
chr1 (94-246)||(2980932-2981084)
chr1 (127-247)||(18915821-18915941)
chr1 (125-247)||(32825-32947)
chr1 (94-247)||(10172972-10173125)
chr1 (123-248)||(30927757-30927882)
chr1 (94-246)||(11397890-11398041)
chr1 (118-246)||(33498864-33498992)
chr1 (98-246)||(40288482-40288630)
chr1 (128-244)||(48798105-48798221)
chr1 (94-247)||(12036744-12036898)
chr1 (94-235)||(16956432-16956573)
chr1 (151-236)||(34334353-34334438)
chr1 (127-236)||(50503395-50503504)
chr1 (127-247)||(15465919-15466039)
chr1 (118-245)||(10336472-10336599)
chr1 (132-247)||(34877944-34878059)
chr1 (79-225)||(37339795-37339942)
chr1 (128-230)||(33004050-33004152)
chr1 (94-235)||(2567242-2567383)
chr1 (129-246)||(6563396-6563513)
chr1 (94-243)||(9659180-9659328)
chr1 (81-234)||(14254256-14254409)
chr1 (98-247)||(31576552-31576701)
chr1 (181-246)||(41743228-41743293)
chr1 (126-247)||(47312932-47313052)
chr1 (94-247)||(50371835-50371988)
chr1 (118-246)||(9853302-9853430)
chr1 (127-247)||(32150956-32151076)
chr1 (79-235)||(34719742-34719898)
chr1 (123-218)||(16263528-16263623)
chr1 (118-247)||(31152670-31152799)
chr1 (140-246)||(15238153-15238259)
chr1 (114-236)||(17358492-17358614)
chr1 (114-228)||(18649373-18649487)
chr1 (118-247)||(5503985-5504114)
chr1 (127-196)||(21849239-21849307)
chr1 (114-231)||(26258666-26258782)
chr1 (94-246)||(26660093-26660244)
chr1 (121-213)||(44969653-44969744)
chr1 (94-169)||(4581683-4581758)
chr1 (118-236)||(17092502-17092620)
chr1 (127-237)||(34697299-34697409)
chr1 (118-232)||(48761145-48761259)
chr1 (153-247)||(51437423-51437517)
chr1 (182-247)||(1764278-1764343)
chr1 (118-243)||(5063869-5063993)
chr1 (94-247)||(18808219-18808372)
chr1 (128-201)||(28324615-28324688)
chr1 (127-236)||(32142880-32142988)
chr1 (171-247)||(892375-892451)
chr1 (126-246)||(45726466-45726586)
chr1 (123-185)||(10507714-10507776)
chr1 (123-201)||(13262083-13262161)
chr1 (123-168)||(35908791-35908836)
chr1 (137-246)||(42744742-42744842)
chr1 (153-236)||(8905211-8905293)
chr1 (123-217)||(13265922-13266016)
chr1 (128-246)||(25165357-25165473)
chr1 (118-176)||(38791635-38791693)
[»] chr8 (47 HSPs)
chr8 (79-246)||(2467103-2467270)
chr8 (89-247)||(6100429-6100587)
chr8 (79-246)||(10927564-10927731)
chr8 (78-246)||(15884540-15884707)
chr8 (127-246)||(14666104-14666223)
chr8 (137-246)||(38922457-38922566)
chr8 (94-246)||(17981399-17981551)
chr8 (79-246)||(24837200-24837367)
chr8 (94-247)||(3418513-3418666)
chr8 (94-247)||(43032858-43033011)
chr8 (114-246)||(1012997-1013129)
chr8 (123-247)||(8141059-8141183)
chr8 (131-247)||(44893315-44893431)
chr8 (81-247)||(14846533-14846698)
chr8 (123-247)||(9860024-9860149)
chr8 (94-246)||(45521127-45521278)
chr8 (94-236)||(4479296-4479437)
chr8 (121-247)||(13085481-13085607)
chr8 (118-247)||(18373967-18374096)
chr8 (118-247)||(43027262-43027391)
chr8 (89-236)||(2964044-2964191)
chr8 (118-247)||(583771-583898)
chr8 (114-247)||(33401819-33401952)
chr8 (131-247)||(34846771-34846886)
chr8 (139-246)||(13358980-13359087)
chr8 (125-247)||(22810037-22810156)
chr8 (137-247)||(34613821-34613931)
chr8 (79-183)||(13357941-13358045)
chr8 (126-247)||(68130-68251)
chr8 (154-247)||(6940515-6940608)
chr8 (159-228)||(22276545-22276614)
chr8 (118-247)||(26570881-26571010)
chr8 (94-247)||(34710567-34710720)
chr8 (80-247)||(10535390-10535556)
chr8 (122-236)||(44031463-44031582)
chr8 (127-201)||(6042824-6042898)
chr8 (118-247)||(24938586-24938715)
chr8 (118-178)||(22958796-22958856)
chr8 (118-233)||(11785887-11786001)
chr8 (139-236)||(20240538-20240635)
chr8 (139-236)||(20252432-20252529)
chr8 (114-195)||(27975900-27975981)
chr8 (114-195)||(28033169-28033250)
chr8 (137-189)||(8586982-8587034)
chr8 (127-247)||(33935768-33935888)
chr8 (127-246)||(38235863-38235982)
chr8 (89-178)||(11298262-11298351)
[»] chr7 (60 HSPs)
chr7 (118-246)||(1797417-1797545)
chr7 (94-246)||(48804640-48804792)
chr7 (79-246)||(13095815-13095982)
chr7 (79-241)||(10047861-10048023)
chr7 (89-247)||(17748377-17748535)
chr7 (129-246)||(43925469-43925586)
chr7 (79-246)||(22993352-22993519)
chr7 (89-247)||(5069810-5069968)
chr7 (94-247)||(34659182-34659335)
chr7 (94-247)||(43346779-43346932)
chr7 (123-246)||(4195231-4195354)
chr7 (94-247)||(26423288-26423440)
chr7 (94-219)||(38578867-38578992)
chr7 (138-246)||(47341833-47341941)
chr7 (94-236)||(39474906-39475049)
chr7 (127-245)||(16802081-16802199)
chr7 (95-245)||(18785627-18785777)
chr7 (129-246)||(365097-365214)
chr7 (79-243)||(21530708-21530872)
chr7 (121-228)||(21190807-21190914)
chr7 (128-247)||(43862006-43862125)
chr7 (89-235)||(22973935-22974081)
chr7 (89-247)||(23658136-23658293)
chr7 (94-247)||(27028235-27028388)
chr7 (94-247)||(27875088-27875240)
chr7 (127-247)||(5039451-5039571)
chr7 (89-232)||(1605912-1606055)
chr7 (131-241)||(42210299-42210409)
chr7 (137-247)||(46414631-46414741)
chr7 (123-236)||(36619283-36619396)
chr7 (103-236)||(45447937-45448070)
chr7 (118-246)||(19914727-19914854)
chr7 (78-246)||(39420795-39420962)
chr7 (127-247)||(4228787-4228904)
chr7 (94-236)||(8734686-8734828)
chr7 (171-247)||(9685695-9685771)
chr7 (94-178)||(41945498-41945582)
chr7 (153-247)||(22268088-22268182)
chr7 (94-232)||(37514892-37515030)
chr7 (127-236)||(14650284-14650393)
chr7 (94-247)||(29805440-29805592)
chr7 (169-246)||(34127695-34127772)
chr7 (118-247)||(42032052-42032181)
chr7 (127-247)||(45960036-45960155)
chr7 (129-201)||(49142704-49142776)
chr7 (103-218)||(28396169-28396284)
chr7 (143-201)||(10317794-10317852)
chr7 (118-247)||(4706008-4706137)
chr7 (118-247)||(4973134-4973263)
chr7 (147-247)||(24969379-24969477)
chr7 (125-201)||(29151942-29152018)
chr7 (118-168)||(3353459-3353509)
chr7 (127-247)||(14535247-14535367)
chr7 (139-236)||(44336860-44336957)
chr7 (125-177)||(30827318-30827370)
chr7 (94-178)||(45697190-45697274)
chr7 (80-187)||(28744178-28744285)
chr7 (127-214)||(34865910-34865997)
chr7 (80-218)||(48244342-48244480)
chr7 (80-177)||(48551883-48551980)
[»] chr4 (78 HSPs)
chr4 (94-246)||(29895746-29895898)
chr4 (94-230)||(42722577-42722713)
chr4 (123-246)||(1446785-1446908)
chr4 (80-247)||(53599018-53599185)
chr4 (94-247)||(38165985-38166138)
chr4 (94-246)||(47078417-47078569)
chr4 (79-241)||(36145200-36145362)
chr4 (96-247)||(1940779-1940927)
chr4 (94-247)||(2559265-2559418)
chr4 (94-246)||(55920993-55921145)
chr4 (94-245)||(40780861-40781012)
chr4 (118-247)||(6779169-6779298)
chr4 (118-246)||(27248387-27248513)
chr4 (103-247)||(8888980-8889124)
chr4 (89-235)||(38168227-38168372)
chr4 (118-247)||(5472872-5473001)
chr4 (94-247)||(52950040-52950193)
chr4 (118-246)||(43458572-43458700)
chr4 (80-242)||(36262753-36262913)
chr4 (128-246)||(24166409-24166527)
chr4 (89-234)||(20128280-20128425)
chr4 (129-246)||(29588695-29588812)
chr4 (89-246)||(33647680-33647837)
chr4 (123-247)||(295562-295685)
chr4 (127-246)||(3574479-3574598)
chr4 (94-224)||(7246646-7246776)
chr4 (105-235)||(49260676-49260806)
chr4 (94-247)||(38075391-38075544)
chr4 (127-219)||(3159502-3159594)
chr4 (118-246)||(7741884-7742012)
chr4 (118-246)||(41162906-41163034)
chr4 (127-247)||(41339428-41339548)
chr4 (127-246)||(48317308-48317427)
chr4 (94-246)||(6032643-6032792)
chr4 (94-195)||(16450310-16450411)
chr4 (89-246)||(20421733-20421889)
chr4 (89-185)||(18531539-18531635)
chr4 (147-247)||(40272384-40272484)
chr4 (129-224)||(48015108-48015203)
chr4 (89-247)||(13073496-13073654)
chr4 (118-243)||(15839959-15840083)
chr4 (171-247)||(13552072-13552148)
chr4 (127-247)||(14123974-14124094)
chr4 (118-246)||(20532433-20532561)
chr4 (95-227)||(21429279-21429411)
chr4 (127-247)||(55005339-55005459)
chr4 (79-194)||(4738629-4738744)
chr4 (127-247)||(7000482-7000598)
chr4 (94-247)||(15732448-15732601)
chr4 (127-224)||(43468328-43468425)
chr4 (123-247)||(20354595-20354719)
chr4 (127-235)||(49952179-49952287)
chr4 (94-201)||(16645122-16645229)
chr4 (129-247)||(48656176-48656295)
chr4 (138-236)||(24850671-24850768)
chr4 (153-246)||(27531717-27531809)
chr4 (97-201)||(3507275-3507378)
chr4 (127-187)||(17080061-17080121)
chr4 (123-247)||(42722408-42722531)
chr4 (123-201)||(8064827-8064905)
chr4 (131-201)||(10541020-10541090)
chr4 (159-236)||(13436783-13436858)
chr4 (94-236)||(48352509-48352651)
chr4 (117-246)||(12703568-12703697)
chr4 (94-183)||(14859313-14859402)
chr4 (103-236)||(30317202-30317335)
chr4 (190-247)||(34667698-34667755)
chr4 (137-177)||(8424582-8424622)
chr4 (89-228)||(21192619-21192756)
chr4 (128-247)||(37382503-37382622)
chr4 (205-247)||(19651556-19651598)
chr4 (126-176)||(23788426-23788476)
chr4 (121-247)||(26479976-26480102)
chr4 (103-177)||(50485971-50486045)
chr4 (118-176)||(55703776-55703834)
chr4 (127-168)||(14567276-14567317)
chr4 (123-211)||(46108688-46108773)
chr4 (103-168)||(54946286-54946351)
[»] scaffold0002 (4 HSPs)
scaffold0002 (80-243)||(319382-319545)
scaffold0002 (94-246)||(527-679)
scaffold0002 (159-246)||(412091-412178)
scaffold0002 (147-236)||(139398-139491)
[»] scaffold0006 (1 HSPs)
scaffold0006 (96-247)||(68473-68621)
[»] scaffold0005 (2 HSPs)
scaffold0005 (127-246)||(271107-271226)
scaffold0005 (127-168)||(250058-250099)
[»] scaffold0170 (1 HSPs)
scaffold0170 (99-241)||(9807-9949)
[»] scaffold0029 (1 HSPs)
scaffold0029 (89-247)||(41000-41158)
[»] scaffold0016 (1 HSPs)
scaffold0016 (94-247)||(8701-8863)
[»] scaffold0376 (1 HSPs)
scaffold0376 (118-236)||(12637-12755)
[»] scaffold0635 (1 HSPs)
scaffold0635 (117-246)||(2113-2242)
[»] scaffold0291 (1 HSPs)
scaffold0291 (94-201)||(6857-6964)
[»] scaffold0209 (1 HSPs)
scaffold0209 (118-247)||(12531-12658)
[»] scaffold0341 (1 HSPs)
scaffold0341 (129-246)||(18589-18706)
[»] scaffold0086 (1 HSPs)
scaffold0086 (94-201)||(26185-26292)
[»] scaffold0010 (2 HSPs)
scaffold0010 (89-188)||(155706-155805)
scaffold0010 (89-247)||(25779-25937)
[»] scaffold0079 (1 HSPs)
scaffold0079 (147-227)||(8151-8230)
[»] scaffold0009 (2 HSPs)
scaffold0009 (94-246)||(42832-42984)
scaffold0009 (160-246)||(9393-9479)
[»] scaffold0316 (1 HSPs)
scaffold0316 (94-236)||(1614-1756)
[»] scaffold0011 (2 HSPs)
scaffold0011 (94-168)||(186552-186626)
scaffold0011 (94-236)||(224284-224426)
[»] scaffold0050 (1 HSPs)
scaffold0050 (127-232)||(72604-72708)
[»] scaffold0384 (1 HSPs)
scaffold0384 (123-236)||(5940-6052)
[»] scaffold0223 (1 HSPs)
scaffold0223 (127-195)||(16887-16955)
[»] scaffold0004 (2 HSPs)
scaffold0004 (127-246)||(95014-95131)
scaffold0004 (80-219)||(7822-7960)
[»] scaffold0155 (1 HSPs)
scaffold0155 (94-189)||(19269-19364)
[»] scaffold0013 (1 HSPs)
scaffold0013 (153-199)||(51735-51781)


Alignment Details
Target: chr3 (Bit Score: 179; Significance: 4e-96; HSPs: 82)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 179; E-Value: 4e-96
Query Start/End: Original strand, 1 - 247
Target Start/End: Original strand, 22405451 - 22405697
Alignment:
Q  1 taaaaggataatcaaacagttactatttgttggatgatcaaaacatgaagacattaaaagctagcatgaattccttcgttttttattcttgggtttcgca 100  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  22405451 taaaaggataatcaaacagttactatttgttggatgatgaaaacatgaagacattaaaagctagcatgaattccttcgttttttattcttgggttttgca 22405550  T
Q  101 ctggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtat 200  Q
    |||||||||| | ||| |||||||||||| ||||| |||||||||||| |||||| |||| ||   ||||||||||||||||| |||||||| |||||||    
T  22405551 ctggtttccgacgcaccaaagatggacgattaatccggctcgtgcataaaggcattcgcattggttaagcgttgttcctcctgagaatagaatccggtat 22405650  T
Q  201 ttcacggatacgtccttggtaggagctccttgccaccggagcccaaa 247  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||||    
T  22405651 ttcacggatacgtcattggtaggagctccttgccactggagcccaaa 22405697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 468 - 588
Target Start/End: Original strand, 22407848 - 22407968
Alignment:
Q  468 ttaactacatgaacctacaatgctacaacaggttaaggtagaagacatgaataataacttgagaagtaatgtgaatgatagaaagacatacacagaagtt 567  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||    
T  22407848 ttaactacatgaacctacaatgctacaataggttaaggtagaagacatgaataataacttgagaagtaatgtgaatgatagaaagacacacatagaagtt 22407947  T
Q  568 aaaacaaaattcatgcaaaaa 588  Q
    |||||||||||||||||||||    
T  22407948 aaaacaaaattcatgcaaaaa 22407968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 94 - 247
Target Start/End: Complemental strand, 54261332 - 54261179
Alignment:
Q  94 tttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaac 193  Q
    |||||||| |||||||| | |||||||| || |||||||||| ||||| ||| ||||||||||||||||| |||||||||||||||||| ||||| ||||    
T  54261332 tttcgcaccggtttccgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttcctcctaggaatcgaac 54261233  T
Q  194 ccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaaa 247  Q
    |||||||| | | | ||||||||||| |||||||||||||||| ||||||||||    
T  54261232 ccggtattccccaggtacgtccttggaaggagctccttgccactggagcccaaa 54261179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 726 - 809
Target Start/End: Original strand, 22407990 - 22408073
Alignment:
Q  726 caaaatacctttcaaagcatcaccaactcataacagtctcattctccatcatatcaacatatgaactcaaatctatagccatac 809  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22407990 caaaatacctttcaaagcatcaccaactcataacagtctcattctccatcatatcaacatatgaactcaaatctatagccatac 22408073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 118 - 247
Target Start/End: Complemental strand, 48342102 - 48341973
Alignment:
Q  118 aaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtcctt 217  Q
    |||||||||||||||||| || || ||| ||||||||||||||||  |||||||||||||| ||| |||||||||||||||||| | | | |||||||||    
T  48342102 aaagatggacgactaatctggttcatgcgtagaggcatgcgcactagccaagcgttgttccccctaggaatagaacccggtattccccaggtacgtcctt 48342003  T
Q  218 ggtaggagctccttgccaccggagcccaaa 247  Q
    || |||||||||||||||| ||||||||||    
T  48342002 ggaaggagctccttgccactggagcccaaa 48341973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 79 - 246
Target Start/End: Complemental strand, 6462533 - 6462366
Alignment:
Q  79 ttttttattcttgggtttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcc 178  Q
    |||||| || |||| |||||||| |||||||  | ||||||  |||| ||||||||| ||||| ||| ||||||||||||||||| |||||||||||||     
T  6462533 ttttttttttttggttttcgcaccggtttccaacccactaataatggtcgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttct 6462434  T
Q  179 tcctgggaatagaacccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaa 246  Q
     |||| |||| |||||||||||| | | ||||||||||||| ||||||||||||||||  ||||||||    
T  6462433 ccctgtgaatcgaacccggtattccccagatacgtccttggaaggagctccttgccactagagcccaa 6462366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 89 - 247
Target Start/End: Complemental strand, 13894037 - 13893879
Alignment:
Q  89 ttgggtttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaat 188  Q
    |||| |||||||| ||||| ||   ||| |||| ||| ||||||||| ||||||||  |||||||||||||| ||||||||||||||||| ||||| |||    
T  13894037 ttggctttcgcaccggttttcgatccaccaaaggtgggcgactaatccggctcgtgtgtagaggcatgcgcattgaccaagcgttgttccccctggaaat 13893938  T
Q  189 agaacccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaaa 247  Q
      ||||||||||| | |||| |||||||||| |||||||||||||||| ||||||||||    
T  13893937 ccaacccggtattccccggacacgtccttggaaggagctccttgccactggagcccaaa 13893879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 89 - 246
Target Start/End: Complemental strand, 25295071 - 25294914
Alignment:
Q  89 ttgggtttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaat 188  Q
    |||| |||||||| |||||||  | ||| || | ||||||||||||| ||||| ||||||||||||||||||||| ||||| |||||| | || | ||||    
T  25295071 ttggctttcgcaccggtttccaacccaccaatggtggacgactaatccggctcatgcatagaggcatgcgcactggccaagtgttgtttccccagagaat 25294972  T
Q  189 agaacccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaa 246  Q
      ||||||||||| | ||||||||||||||| |||||||||||||||| |||||||||    
T  25294971 caaacccggtattccccggatacgtccttggaaggagctccttgccactggagcccaa 25294914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 80 - 247
Target Start/End: Complemental strand, 15320306 - 15320139
Alignment:
Q  80 tttttattcttgggtttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcct 179  Q
    ||||| || |||| |||||||| |||||| | | ||| |||| ||| ||||||||| ||||||||| ||||||||||| ||||| |||| | ||||||||    
T  15320306 tttttttttttggctttcgcaccggtttctgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcacactggccaatcattgttcct 15320207  T
Q  180 cctgggaatagaacccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaaa 247  Q
    ||| | ||| |||||||||||| | ||| ||||||||||| |||||||||||||||| |||| |||||    
T  15320206 cctcgaaatcgaacccggtattccccgggtacgtccttggaaggagctccttgccactggagtccaaa 15320139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 80 - 247
Target Start/End: Complemental strand, 29128039 - 29127872
Alignment:
Q  80 tttttattcttgggtttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcct 179  Q
    ||||| || |||| |||||||  |||||||| | ||| |||| ||| ||||||||| ||||| ||| ||||||||||||||||||||||| |||||||      
T  29128039 tttttttttttggctttcgcatcggtttccgacccaccaaaggtgggcgactaatccggctcatgcgtagaggcatgcgcactgaccaagtgttgttctc 29127940  T
Q  180 cctgggaatagaacccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaaa 247  Q
    ||||| ||| ||||||| |||| | | ||||||||||||| |||| ||||||||||| ||||||||||    
T  29127939 cctggaaatcgaacccgatattccccagatacgtccttggaaggatctccttgccactggagcccaaa 29127872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 123 - 246
Target Start/End: Complemental strand, 29135990 - 29135867
Alignment:
Q  123 tggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtag 222  Q
    |||| |||||||| ||||| ||| ||||||||||||||||| ||||| |||||||| ||||||||| ||| |||||||| | ||||||||||||||| ||    
T  29135990 tggaagactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaatccggtattccccggatacgtccttggaag 29135891  T
Q  223 gagctccttgccaccggagcccaa 246  Q
     ||||||||||||| |||||||||    
T  29135890 aagctccttgccactggagcccaa 29135867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 96 - 246
Target Start/End: Original strand, 26207804 - 26207954
Alignment:
Q  96 tcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaaccc 195  Q
    |||||| |||||||| | ||||||  |||| ||||||||| ||||| ||| ||||||||||| |||||  ||||||||||||| | ||||||| ||||||    
T  26207804 tcgcaccggtttccgacccactaataatggccgactaatccggctcatgcgtagaggcatgcacactggacaagcgttgttccccgtgggaatcgaaccc 26207903  T
Q  196 ggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaa 246  Q
    |||||| | ||| ||| ||||||| |||||||||||||||| |||||||||    
T  26207904 ggtattccccgggtacatccttggaaggagctccttgccactggagcccaa 26207954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 94 - 247
Target Start/End: Original strand, 51682955 - 51683108
Alignment:
Q  94 tttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaac 193  Q
    ||||||||||||||||| | ||| |  | ||| ||||||||| ||||||||   ||||||||||||||||  ||||||||||||| ||||||||| ||||    
T  51682955 tttcgcactggtttccgacccaccattggtgggcgactaatccggctcgtgtggagaggcatgcgcactggtcaagcgttgttccccctgggaatcgaac 51683054  T
Q  194 ccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaaa 247  Q
    | |||||| | |||||||||| |||| |||||||||| ||||| ||||||||||    
T  51683055 ctggtattccccggatacgtctttggaaggagctcctcgccactggagcccaaa 51683108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 127 - 246
Target Start/End: Original strand, 42412808 - 42412927
Alignment:
Q  127 cgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggagc 226  Q
    ||||||||| ||||| ||| |||||||||| |||||  |||||||||||||| || |||||| |||||||||||| | ||||||||||||||| ||||||    
T  42412808 cgactaatccggctcatgcgtagaggcatgggcacttgccaagcgttgttccccccgggaatcgaacccggtattccccggatacgtccttggaaggagc 42412907  T
Q  227 tccttgccaccggagcccaa 246  Q
    |||||||||  |||||||||    
T  42412908 tccttgccattggagcccaa 42412927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 94 - 236
Target Start/End: Complemental strand, 7328949 - 7328808
Alignment:
Q  94 tttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaac 193  Q
    |||||||| ||||| || | ||| |||| ||| ||||||||| ||||| ||| || |||||||||||||| ||||| |||||||| ||||||||| ||||    
T  7328949 tttcgcaccggttttcgacccaccaaaggtgggcgactaatccggctcatgcgta-aggcatgcgcactggccaagtgttgttccccctgggaatcgaac 7328851  T
Q  194 ccggtatttcacggatacgtccttggtaggagctccttgccac 236  Q
    |||||||||| ||| ||||||||||| |||| |||||||||||    
T  7328850 ccggtatttcccgggtacgtccttggaaggaactccttgccac 7328808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 97 - 246
Target Start/End: Complemental strand, 10040659 - 10040511
Alignment:
Q  97 cgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccg 196  Q
    ||||| |||||||  | ||| |||| |||||||| | || ||||||||| ||||||||||||||||| |||||||||||||| |||| |||| |||||||    
T  10040659 cgcaccggtttccaacccaccaaaggtggacgaccattccggctcgtgcgtagaggcatgcgcactggccaagcgttgttcc-cctgagaatcgaacccg 10040561  T
Q  197 gtatttcacggatacgtccttggtaggagctccttgccaccggagcccaa 246  Q
     |||| | ||| ||||||||| | |||||||||||||||| |||||||||    
T  10040560 atattccccgggtacgtccttagaaggagctccttgccactggagcccaa 10040511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 126 - 247
Target Start/End: Complemental strand, 45877528 - 45877407
Alignment:
Q  126 acgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggag 225  Q
    |||||||||| ||||| ||| |||||||||| |||||| ||||| |||||| | ||||| ||| |||||||||||| | ||||||||||||||| ||| |    
T  45877528 acgactaatccggctcatgcgtagaggcatgtgcactggccaagtgttgtttcccctggaaatcgaacccggtattccccggatacgtccttggaagggg 45877429  T
Q  226 ctccttgccaccggagcccaaa 247  Q
    ||||||||||| ||||||||||    
T  45877428 ctccttgccactggagcccaaa 45877407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 125 - 246
Target Start/End: Original strand, 47303521 - 47303642
Alignment:
Q  125 gacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtagga 224  Q
    ||||||||||| ||||| ||  |||||||||| |||||||||||| ||||||||||||||||||  |||||| |||||  ||||||||||||||| |  |    
T  47303521 gacgactaatccggctcatgtgtagaggcatgtgcactgaccaagtgttgttcctcctgggaatcaaacccgatattttccggatacgtccttggaaaaa 47303620  T
Q  225 gctccttgccaccggagcccaa 246  Q
    ||||||| ||||||||||||||    
T  47303621 gctccttaccaccggagcccaa 47303642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 321 - 385
Target Start/End: Original strand, 22407365 - 22407429
Alignment:
Q  321 tttttaaaatgaaatcctacataattacattttcagaggaagacatttgaaataaaaaatgaaat 385  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  22407365 tttttaaaatgaaatcctacataatttcattttcagaggaagacatttgaaataaaaaatgaaat 22407429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 94 - 246
Target Start/End: Original strand, 29762156 - 29762308
Alignment:
Q  94 tttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaac 193  Q
    |||||||| |||||||| | ||| || | |||||||||||||  |||| ||||||||||||||||||||| ||||| |||||| | |||| |||| | ||    
T  29762156 tttcgcaccggtttccgacccaccaatggtggacgactaatccagctcatgcatagaggcatgcgcactggccaagtgttgttgcccctgagaatcggac 29762255  T
Q  194 ccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaa 246  Q
    ||| |||| | || |||| ||||||| |||||||||||||||| |||||||||    
T  29762256 ccgatattccccgaatacatccttggaaggagctccttgccactggagcccaa 29762308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 94 - 246
Target Start/End: Original strand, 30767248 - 30767400
Alignment:
Q  94 tttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaac 193  Q
    ||||||||| ||||||| | ||| |||| ||| ||||||||| ||||||||| ||||||||||| ||||| ||||| |||||||| ||||| ||| ||||    
T  30767248 tttcgcactagtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcacactggccaagtgttgttccccctggaaatcgaac 30767347  T
Q  194 ccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaa 246  Q
    ||| |||| | | | ||| ||||||| |||| ||||||||||| |||||||||    
T  30767348 ccgatattccccaggtacatccttggaaggaactccttgccactggagcccaa 30767400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 123 - 247
Target Start/End: Complemental strand, 33251739 - 33251615
Alignment:
Q  123 tggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtag 222  Q
    ||||||||||||| ||||| ||| ||||||||||| ||||| |||| |||||||||  | |||||| |||||||||||| | |  |||||||||||| ||    
T  33251739 tggacgactaatccggctcatgcgtagaggcatgcacactggccaaacgttgttcccaccgggaatcgaacccggtattcccctaatacgtccttggaag 33251640  T
Q  223 gagctccttgccaccggagcccaaa 247  Q
    |||||| ||||||||||||||||||    
T  33251639 gagctcattgccaccggagcccaaa 33251615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 123 - 247
Target Start/End: Complemental strand, 49198428 - 49198304
Alignment:
Q  123 tggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtag 222  Q
    ||||||||||||| ||||| ||| ||||||||||||||||| ||||| |||||||| ||| ||||| |||||||||||| | |||||| |||||||| ||    
T  49198428 tggacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctaggaatcgaacccggtattccccggatatgtccttggaag 49198329  T
Q  223 gagctccttgccaccggagcccaaa 247  Q
     | ||||||| ||| ||||||||||    
T  49198328 aaactccttgtcactggagcccaaa 49198304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 104 - 236
Target Start/End: Complemental strand, 49543615 - 49543483
Alignment:
Q  104 gtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttc 203  Q
    ||||||| | |||||||| ||| ||||||||  ||||||||| ||||||||||| |||||||||| ||||||||| | || |||| ||||||| |||| |    
T  49543615 gtttccgacccactaaaggtgggcgactaattcggctcgtgcgtagaggcatgcacactgaccaaacgttgttccccatgagaatcgaacccgatattcc 49543516  T
Q  204 acggatacgtccttggtaggagctccttgccac 236  Q
      |||||||||||||| ||||||||||||||||    
T  49543515 cgggatacgtccttggaaggagctccttgccac 49543483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 79 - 246
Target Start/End: Original strand, 7310689 - 7310856
Alignment:
Q  79 ttttttattcttgggtttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcc 178  Q
    |||||| || |||| |||||||  |||||||| | ||| |||||||  ||||||||| ||||||||| ||||||||||| ||| |  |||| ||||||||    
T  7310689 ttttttttttttggctttcgcatcggtttccgacccaccaaagatgagcgactaatccggctcgtgcgtagaggcatgcacaccgggcaagtgttgttcc 7310788  T
Q  179 tcctgggaatagaacccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaa 246  Q
      |||||||| |||||||||||| | | | ||||| ||||| |||||||| |||||||||||||||||    
T  7310789 cactgggaatcgaacccggtattcctcaggtacgttcttggaaggagctcattgccaccggagcccaa 7310856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 80 - 242
Target Start/End: Original strand, 28572198 - 28572360
Alignment:
Q  80 tttttattcttgggtttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcct 179  Q
    ||||| || |||| |||||||| |||||||| | ||| |||| ||| ||||||||| ||||||||| |||||||||||  |||| |||||||||||| |     
T  28572198 tttttttttttggctttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcatactggccaagcgttgtttcc 28572297  T
Q  180 cctgggaatagaacccggtatttcacggatacgtccttggtaggagctccttgccaccggagc 242  Q
    ||||||||| |||||| ||||| | ||| | ||| ||||  |||||||||||||||| |||||    
T  28572298 cctgggaatcgaacccagtattccccgggtgcgttcttgaaaggagctccttgccactggagc 28572360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 118 - 247
Target Start/End: Complemental strand, 31072960 - 31072831
Alignment:
Q  118 aaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtcctt 217  Q
    |||| ||||||| ||||| || |||||| |||||||||| ||||||||||||||||||||| ||||| ||| ||||| ||||||   ||| |||||||||    
T  31072960 aaaggtggacgattaatctgggtcgtgcgtagaggcatgtgcactgaccaagcgttgttccccctggaaatcgaacctggtattctccgggtacgtcctt 31072861  T
Q  218 ggtaggagctccttgccaccggagcccaaa 247  Q
    |  |||||||||||||||  ||||||||||    
T  31072860 gaaaggagctccttgccattggagcccaaa 31072831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 94 - 247
Target Start/End: Complemental strand, 35316062 - 35315909
Alignment:
Q  94 tttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaac 193  Q
    |||||||  |||||||| | ||| |||  ||| |||||||||  |||| ||| ||||||||||||||||| ||||| |||||||| ||||||||| ||||    
T  35316062 tttcgcatcggtttccgacccaccaaaagtgggcgactaatccagctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaac 35315963  T
Q  194 ccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaaa 247  Q
    ||| ||||   ||| ||||||||||| |||||||| ||||||| ||||||||||    
T  35315962 ccgatattctccgggtacgtccttggaaggagctctttgccactggagcccaaa 35315909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 118 - 247
Target Start/End: Original strand, 41630537 - 41630666
Alignment:
Q  118 aaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtcctt 217  Q
    |||| ||| ||||||||| ||||| ||  |||||||||||||||||  ||||||||||||| | ||||||| |||||||||||||  ||| ||||||| |    
T  41630537 aaaggtgggcgactaatccggctcatgtgtagaggcatgcgcactgggcaagcgttgttccccttgggaattgaacccggtattttccggttacgtccat 41630636  T
Q  218 ggtaggagctccttgccaccggagcccaaa 247  Q
    || |||||||||||| ||| ||||||||||    
T  41630637 ggaaggagctccttgtcactggagcccaaa 41630666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 79 - 247
Target Start/End: Original strand, 3136680 - 3136847
Alignment:
Q  79 ttttttattcttgggtttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcc 178  Q
    |||||| || |||| |||||||| |||||||| |  || |||| ||||||||||||| | ||| ||| ||||||||||||||||| ||||| ||||||||    
T  3136680 ttttttttttttggctttcgcaccggtttccgaccaaccaaaggtggacgactaatccgactcatgcgtagaggcatgcgcactgcccaagtgttgttcc 3136779  T
Q  179 tcctgggaatagaacccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaaa 247  Q
     ||||  ||| ||| |||||||| | ||| ||||||||||  ||||||| |||||||| ||||||||||    
T  3136780 -cctgaaaatcgaatccggtattccccgggtacgtccttgaaaggagcttcttgccacgggagcccaaa 3136847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 89 - 228
Target Start/End: Complemental strand, 47219255 - 47219116
Alignment:
Q  89 ttgggtttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaat 188  Q
    |||| |||||||| |||||||| | ||  |||| ||||||||||||| ||||| ||| ||||||||||||||||  |||||||||||| | | |||||||    
T  47219255 ttggctttcgcaccggtttccgacccatcaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactagccaagcgttgtttcccttgggaat 47219156  T
Q  189 agaacccggtatttcacggatacgtccttggtaggagctc 228  Q
     ||||| |||||| | ||||||||||||||| | ||||||    
T  47219155 cgaacctggtattccccggatacgtccttggaaagagctc 47219116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 80 - 247
Target Start/End: Original strand, 47749092 - 47749258
Alignment:
Q  80 tttttattcttgggtttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcct 179  Q
    ||||| || |||| |||||||  |||||||| |  || |||| ||| ||||||||  ||||||||| ||||||||||||||||| ||||| ||||||||     
T  47749092 tttttttttttggctttcgcatcggtttccgacctaccaaaggtgggcgactaattcggctcgtgcgtagaggcatgcgcactggccaagagttgttcc- 47749190  T
Q  180 cctgggaatagaacccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaaa 247  Q
    ||| ||||| |||||||||||| |  |||||||||||||| || ||||| || |||| ||||||||||    
T  47749191 cctaggaatcgaacccggtattccctggatacgtccttggaagaagctcattaccactggagcccaaa 47749258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 138 - 228
Target Start/End: Original strand, 15795539 - 15795628
Alignment:
Q  138 gctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggagctc 228  Q
    |||||||| |||||||||||||||||||||||||||||||| ||||||||| |||| ||||||| | ||| ||||||||||| ||||||||    
T  15795539 gctcgtgcgtagaggcatgcgcactgaccaagcgttgttcc-cctgggaatcgaactcggtattccccgggtacgtccttggaaggagctc 15795628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 89 - 247
Target Start/End: Original strand, 51060277 - 51060435
Alignment:
Q  89 ttgggtttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaat 188  Q
    |||| |||||||| |||||||| | ||| || | |||||||||||||  | || ||| ||||||||||||||||||||||| |||||||| |||| ||||    
T  51060277 ttggctttcgcaccggtttccgacccaccaatggtggacgactaatccagttcatgcgtagaggcatgcgcactgaccaagtgttgttccccctgagaat 51060376  T
Q  189 agaacccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaaa 247  Q
     ||||||| |||| | ||||||  ||||||| |||||||  ||||||| |||| |||||    
T  51060377 cgaacccgatattccccggatagatccttggaaggagctatttgccactggagtccaaa 51060435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 118 - 247
Target Start/End: Complemental strand, 10855465 - 10855337
Alignment:
Q  118 aaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtcctt 217  Q
    |||||||| ||||||||  || |||||| |||||||||||| |||| |||||||||||||| ||||| |||  ||||||||||||| |   ||| |||||    
T  10855465 aaagatgg-cgactaattcggttcgtgcgtagaggcatgcgtactggccaagcgttgttccccctggaaatcaaacccggtatttcccaagtacatcctt 10855367  T
Q  218 ggtaggagctccttgccaccggagcccaaa 247  Q
    || |||||||||||||||| ||||||||||    
T  10855366 ggaaggagctccttgccactggagcccaaa 10855337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 125 - 230
Target Start/End: Original strand, 52364832 - 52364937
Alignment:
Q  125 gacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtagga 224  Q
    ||||| |||||  |||||||| |||||||||||||||||  |||||||||||||| |||||||| |||| ||||||| | ||| ||||||||||| ||||    
T  52364832 gacgattaatccagctcgtgcgtagaggcatgcgcactggtcaagcgttgttccttctgggaatcgaactcggtattccccgggtacgtccttggaagga 52364931  T
Q  225 gctcct 230  Q
    ||||||    
T  52364932 gctcct 52364937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 118 - 201
Target Start/End: Complemental strand, 30045903 - 30045820
Alignment:
Q  118 aaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatt 201  Q
    |||| ||||||||||||||| ||||||| ||||| ||||||||||| |||||||||||||| ||| ||||| ||||||||||||    
T  30045903 aaaggtggacgactaatcagactcgtgcgtagagacatgcgcactggccaagcgttgttccccctaggaatcgaacccggtatt 30045820  T

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Target: chr3; HSP #38
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 127 - 246
Target Start/End: Complemental strand, 39849144 - 39849026
Alignment:
Q  127 cgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggagc 226  Q
    ||||||||| ||||| ||| ||||||||||| ||||| ||||||||||||||| |||||||| |||||||  ||| |  |  ||||||||||| ||||||    
T  39849144 cgactaatccggctcatgcgtagaggcatgcacactggccaagcgttgttcct-ctgggaatcgaacccgaaattccctgagtacgtccttggaaggagc 39849046  T
Q  227 tccttgccaccggagcccaa 246  Q
    |||||||||| |||||||||    
T  39849045 tccttgccactggagcccaa 39849026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 79 - 218
Target Start/End: Complemental strand, 54237569 - 54237430
Alignment:
Q  79 ttttttattcttgggtttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcc 178  Q
    |||||| || |||| |||||||| |||||||| | |||||| | ||||||||| ||| ||||| ||| ||||| ||||||||||||||||| |||||||     
T  54237569 ttttttctttttggctttcgcaccggtttccgacccactaatggtggacgacttatccggctcatgcgtagagacatgcgcactgaccaagtgttgttct 54237470  T
Q  179 tcctgggaatagaacccggtatttcacggatacgtccttg 218  Q
     ||||  ||| || |||| |||||| ||||||||||||||    
T  54237469 ccctgaaaatcgaccccgatatttcccggatacgtccttg 54237430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 125 - 246
Target Start/End: Complemental strand, 3755645 - 3755524
Alignment:
Q  125 gacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtagga 224  Q
    ||||||||||| ||||| ||| ||||| |||||||||||  ||| ||||||||||||||||||| |||  ||||||| | ||||||||||||||  | ||    
T  3755645 gacgactaatccggctcatgcgtagagacatgcgcactggtcaaacgttgttcctcctgggaatcgaagtcggtattccccggatacgtccttgaaaaga 3755546  T
Q  225 gctccttgccaccggagcccaa 246  Q
    |||| ||||||| |||| ||||    
T  3755545 gctctttgccactggagtccaa 3755524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 123 - 228
Target Start/End: Complemental strand, 3763127 - 3763023
Alignment:
Q  123 tggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtag 222  Q
    |||||||||||||  | |||||| ||||| ||||| ||||||||||||||||||||| ||| |||| ||| |||||||||| ||||||||||||||  ||    
T  3763127 tggacgactaatccagttcgtgcgtagagacatgcacactgaccaagcgttgttcct-ctgtgaatcgaatccggtatttcccggatacgtccttgaaag 3763029  T
Q  223 gagctc 228  Q
    ||||||    
T  3763028 gagctc 3763023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 272 - 329
Target Start/End: Original strand, 22406783 - 22406840
Alignment:
Q  272 aaaggaatcttaaatttaaaatcttacatgaaatcatgctcttgcataatttttaaaa 329  Q
    |||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  22406783 aaaggaatcttaaatttagaatcttacatgaaatcatgctcatgcataatttttaaaa 22406840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 94 - 246
Target Start/End: Complemental strand, 47471937 - 47471786
Alignment:
Q  94 tttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaac 193  Q
    |||||||  |||||||| | ||| |||| ||||||||||||  ||||| ||| |||| |||||||||||  |||||| ||||||| ||||||||| ||||    
T  47471937 tttcgcatcggtttccgacccaccaaaggtggacgactaattcggctcatgcgtagaagcatgcgcactagccaagcattgttcc-cctgggaatcgaac 47471839  T
Q  194 ccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaa 246  Q
    |||||||| |   | ||||||||||| |||||||| |||||||  ||||||||    
T  47471838 ccggtattccctaggtacgtccttggaaggagctctttgccactagagcccaa 47471786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 147 - 247
Target Start/End: Complemental strand, 49082877 - 49082777
Alignment:
Q  147 tagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaa 246  Q
    |||| |||||||||||| | |||||||||||  ||||||||| |||| ||||||| | ||||||||||||| | ||||||||| |||||| |||||||||    
T  49082877 tagatgcatgcgcactggctaagcgttgttctccctgggaatcgaactcggtattccccggatacgtccttagaaggagctccctgccactggagcccaa 49082778  T
Q  247 a 247  Q
    |    
T  49082777 a 49082777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 127 - 242
Target Start/End: Complemental strand, 28242351 - 28242236
Alignment:
Q  127 cgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggagc 226  Q
    ||||||||| | ||| |||||||||||||| |||||| |||| | ||||||||||||| |||  |||||||||||   |||||||||| |||| ||||||    
T  28242351 cgactaatccgcctcatgcatagaggcatgtgcactggccaaacattgttcctcctggcaatctaacccggtattctccggatacgtcattggaaggagc 28242252  T
Q  227 tccttgccaccggagc 242  Q
    || || ||||||||||    
T  28242251 tctttaccaccggagc 28242236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 79 - 201
Target Start/End: Original strand, 3507519 - 3507641
Alignment:
Q  79 ttttttattcttgggtttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcc 178  Q
    |||||| || |||| |||||||| |||||||| | ||| |||| ||  ||||||||| ||||||||| ||||||||||||||||| ||||| ||||||||    
T  3507519 tttttttttgttggttttcgcaccggtttccgacccaccaaaggtgagcgactaatccggctcgtgcgtagaggcatgcgcactggccaagtgttgttcc 3507618  T
Q  179 tcctgggaatagaacccggtatt 201  Q
      || |||||  |||||||||||    
T  3507619 ctctaggaatcaaacccggtatt 3507641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 84 - 230
Target Start/End: Complemental strand, 53649843 - 53649697
Alignment:
Q  84 tattcttgggtttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctg 183  Q
    |||| |||| |||||||| ||||||||   ||  |||| || |||||||||| ||||| ||| ||||| || |||||||| ||||| |||||||  ||||    
T  53649843 tatttttggttttcgcaccggtttccgatccatcaaaggtgaacgactaatccggctcatgcgtagagacaggcgcactggccaagtgttgttcaccctg 53649744  T
Q  184 ggaatagaacccggtatttcacggatacgtccttggtaggagctcct 230  Q
     |||| |||||||||||| | || |||||||||||| ||||||||||    
T  53649743 agaatcgaacccggtattccccgaatacgtccttggaaggagctcct 53649697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 94 - 183
Target Start/End: Complemental strand, 19147067 - 19146978
Alignment:
Q  94 tttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctg 183  Q
    |||||||| |||||||| | ||| |||| |||||||||||||  ||||||||||||||| || | ||||| |||||||||||||||||||    
T  19147067 tttcgcaccggtttccgacccaccaaaggtggacgactaatccagctcgtgcatagagggatacacactggccaagcgttgttcctcctg 19146978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 118 - 247
Target Start/End: Original strand, 32873574 - 32873702
Alignment:
Q  118 aaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtcctt 217  Q
    |||| ||| ||||||||| ||||| | | |||||||||| ||||||  ||||||||||||  ||| ||||| ||||| |||| ||| ||| |||||||||    
T  32873574 aaaggtgggcgactaatctggctcatacgtagaggcatgtgcactggtcaagcgttgttctccctaggaatcgaacctggta-ttcccgggtacgtcctt 32873672  T
Q  218 ggtaggagctccttgccaccggagcccaaa 247  Q
    || | |||||||||||||| ||||||||||    
T  32873673 ggaatgagctccttgccactggagcccaaa 32873702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 118 - 247
Target Start/End: Original strand, 35923648 - 35923777
Alignment:
Q  118 aaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtcctt 217  Q
    |||||||||||||||||  | ||||||| ||||||||||||||||| |||| ||||||||| |||  |||| ||||| ||||||   | | |||||||||    
T  35923648 aaagatggacgactaattcgactcgtgcttagaggcatgcgcactggccaaacgttgttccccctatgaatcgaacctggtattctccaggtacgtcctt 35923747  T
Q  218 ggtaggagctccttgccaccggagcccaaa 247  Q
    || | |||||| |||||||  |||||||||    
T  35923748 ggaatgagctcattgccactagagcccaaa 35923777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 147 - 247
Target Start/End: Original strand, 11687163 - 11687263
Alignment:
Q  147 tagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaa 246  Q
    ||||||||||||||||| |||||| ||||||| |||| ||||  |||||||||||   | | ||||||||||| ||||||| |||||||| |||||||||    
T  11687163 tagaggcatgcgcactggccaagcattgttccccctgagaatcaaacccggtattctccaggtacgtccttggaaggagcttcttgccactggagcccaa 11687262  T
Q  247 a 247  Q
    |    
T  11687263 a 11687263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 154 - 236
Target Start/End: Original strand, 7612987 - 7613069
Alignment:
Q  154 atgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggagctccttgccac 236  Q
    |||||||||  |||||||||||||| ||||||||| |||||||||||| | |   ||||||||||| ||||||||||||||||    
T  7612987 atgcgcactagccaagcgttgttccccctgggaatcgaacccggtattccccaagtacgtccttggaaggagctccttgccac 7613069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 103 - 236
Target Start/End: Complemental strand, 4638251 - 4638118
Alignment:
Q  103 ggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtattt 202  Q
    |||||||| | || ||||| ||| | ||||||| ||||||||| |||||| ||||||||||  ||||||||||| ||||||||||| |||||   |||||    
T  4638251 ggtttccgacccattaaaggtgggctactaatccggctcgtgcgtagaggtatgcgcactggtcaagcgttgtttctcctgggaatcgaacctattattt 4638152  T
Q  203 cacggatacgtccttggtaggagctccttgccac 236  Q
    |   |||||||||||   |||| |||||||||||    
T  4638151 ccaagatacgtccttaaaaggaactccttgccac 4638118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 200
Target Start/End: Complemental strand, 26043885 - 26043812
Alignment:
Q  127 cgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtat 200  Q
    ||||||||| ||||| ||| ||||||||||||||||| ||||| |||||||  ||||||||| |||||||||||    
T  26043885 cgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttctccctgggaatcgaacccggtat 26043812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 138 - 246
Target Start/End: Complemental strand, 40944945 - 40944837
Alignment:
Q  138 gctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggagctccttgccacc 237  Q
    |||| ||| |||||||||||  ||||   ||| |||||||| ||||||||| |||| |||||||    |||||||||||||| ||||||| |||||||||    
T  40944945 gctcatgcgtagaggcatgcatactggttaagtgttgttccccctgggaatcgaactcggtattctctggatacgtccttggaaggagcttcttgccacc 40944846  T
Q  238 ggagcccaa 246  Q
    |||||||||    
T  40944845 ggagcccaa 40944837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 94 - 201
Target Start/End: Complemental strand, 7650333 - 7650226
Alignment:
Q  94 tttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaac 193  Q
    |||||||| |||||||  | ||| |||| ||| ||||||||| ||||||||| ||||| ||| || |||| ||||| |||||||| ||||| ||| ||||    
T  7650333 tttcgcaccggtttccaacccaccaaaggtgggcgactaatccggctcgtgcgtagagacattcgtactggccaagtgttgttccccctggaaatcgaac 7650234  T
Q  194 ccggtatt 201  Q
    ||||||||    
T  7650233 ccggtatt 7650226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 114 - 201
Target Start/End: Complemental strand, 8362663 - 8362576
Alignment:
Q  114 cactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatt 201  Q
    |||||||| ||||||||||||  ||||| ||| |||||||||||| |||| |||| ||||||| |  |||||||| ||||||||||||    
T  8362663 cactaaaggtggacgactaatttggctcatgcgtagaggcatgcggactggccaaacgttgtttccactgggaattgaacccggtatt 8362576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 114 - 201
Target Start/End: Original strand, 34662340 - 34662427
Alignment:
Q  114 cactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatt 201  Q
    |||||||| ||||||||||||  ||||| ||||||||| |||||| ||||||||| |||| |||||||||  ||| ||||||| ||||    
T  34662340 cactaaaggtggacgactaattcggctcatgcatagagacatgcgtactgaccaaacgttattcctcctgaaaatcgaacccgatatt 34662427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 147 - 210
Target Start/End: Original strand, 40660381 - 40660444
Alignment:
Q  147 tagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggata 210  Q
    ||||||||||||||||||||||  |||||||||||| ||||| ||| |||||||||| ||||||    
T  40660381 tagaggcatgcgcactgaccaaatgttgttcctcctaggaatcgaatccggtatttcccggata 40660444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 89 - 235
Target Start/End: Complemental strand, 928711 - 928565
Alignment:
Q  89 ttgggtttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaat 188  Q
    |||| |||||||| | ||| || | ||| |||| |||| |||||||| ||||||||| ||| |||||||||||||  |||| |||||||| |||| ||||    
T  928711 ttggctttcgcaccgattttcgactcaccaaaggtggatgactaatccggctcgtgcgtagcggcatgcgcactggtcaagtgttgttccccctgagaat 928612  T
Q  189 agaacccggtatttcacggatacgtccttggtaggagctccttgcca 235  Q
     ||| | |||||| |   | ||||||||||| | |||||||||||||    
T  928611 cgaatctggtattccctaggtacgtccttggaatgagctccttgcca 928565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 127 - 188
Target Start/End: Original strand, 26362001 - 26362062
Alignment:
Q  127 cgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaat 188  Q
    ||||||||| ||||||||| ||||||||||| |||||||||| ||||||||| | |||||||    
T  26362001 cgactaatccggctcgtgcgtagaggcatgcacactgaccaaacgttgttccccttgggaat 26362062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 153 - 246
Target Start/End: Original strand, 37092565 - 37092658
Alignment:
Q  153 catgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaa 246  Q
    ||||||||||| |||| ||||||||| | ||| |||  || ||| |||| ||||| ||||||||||| || ||||||||||||| |||||||||    
T  37092565 catgcgcactggccaaacgttgttccccttggaaatctaatccgatattccacgggtacgtccttggaagaagctccttgccactggagcccaa 37092658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 146 - 247
Target Start/End: Original strand, 46529923 - 46530024
Alignment:
Q  146 atagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggagctccttgccaccggagccca 245  Q
    |||||||||||| ||||| | |||| ||||| |  ||| |||| |||||||||||| | | | ||||||||||  |||||||||||||||| ||||||||    
T  46529923 atagaggcatgcacactggcgaagcattgtttcctctgagaatcgaacccggtattccccaggtacgtccttgaaaggagctccttgccactggagccca 46530022  T
Q  246 aa 247  Q
    ||    
T  46530023 aa 46530024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 236
Target Start/End: Original strand, 13167497 - 13167590
Alignment:
Q  147 tagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacgga----tacgtccttggtaggagctccttgccac 236  Q
    |||||||||| |||||| |||||||||||||||  ||||||| ||||||| |||| | | ||    ||||||||||| ||||||||||||||||    
T  13167497 tagaggcatgtgcactggccaagcgttgttccttttgggaatcgaacccgatattccccagatacgtacgtccttggaaggagctccttgccac 13167590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 381 - 421
Target Start/End: Original strand, 22407761 - 22407801
Alignment:
Q  381 gaaatcatgcataattgaactccatttaaactttctaagtc 421  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  22407761 gaaatcatgcataattgaactccatttgaactttctaagtc 22407801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 246
Target Start/End: Complemental strand, 41219654 - 41219547
Alignment:
Q  138 gctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggagctccttgccacc 237  Q
    ||||||||  |||||||| ||||||| |||| |||||||||||||| |||| ||||  |||| ||| || |||||||||| | |||||||| |||| ||     
T  41219654 gctcgtgcgcagaggcatacgcactggccaaacgttgttcctcctgagaatcgaacttggta-ttcccgtatacgtccttagaaggagctcattgcaacg 41219556  T
Q  238 ggagcccaa 246  Q
    |||||||||    
T  41219555 ggagcccaa 41219547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 79 - 163
Target Start/End: Original strand, 49021189 - 49021273
Alignment:
Q  79 ttttttattcttgggtttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactg 163  Q
    |||||| || |||| |||||||| |||||||| | ||| || | ||||||||||||| ||||| ||| |||||||||||||||||    
T  49021189 ttttttttttttggctttcgcaccggtttccgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactg 49021273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 118 - 201
Target Start/End: Complemental strand, 8164635 - 8164552
Alignment:
Q  118 aaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatt 201  Q
    |||| ||| ||||||||| | ||||||| || |||||||||||||| |||||||||||||| | | | ||| ||||||||||||    
T  8164635 aaaggtgggcgactaatccgactcgtgcgtaaaggcatgcgcactggccaagcgttgttccccttagaaattgaacccggtatt 8164552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 89 - 176
Target Start/End: Original strand, 35998567 - 35998654
Alignment:
Q  89 ttgggtttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgtt 176  Q
    |||| |||||||| |||||| | | |||||||| ||||||| |||||   ||||||| |||||||||| ||||||| |||||||||||    
T  35998567 ttggctttcgcaccggtttctgacccactaaaggtggacgattaatccaactcgtgcgtagaggcatgtgcactgatcaagcgttgtt 35998654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 195
Target Start/End: Original strand, 26590311 - 26590368
Alignment:
Q  138 gctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaaccc 195  Q
    |||||||  ||||||||||| |||||||||||||||||||| |||| |||| ||||||    
T  26590311 gctcgtgtgtagaggcatgcacactgaccaagcgttgttccccctgagaatcgaaccc 26590368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 201
Target Start/End: Original strand, 45402362 - 45402459
Alignment:
Q  104 gtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatt 201  Q
    ||||||| | |||||||| || |||||||||| ||||| ||| ||||||||||||||| | || || ||||||||  || ||||| ||||||| ||||    
T  45402362 gtttccgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcgcacaggccgagtgttgttccctctaggaatcgaacccgatatt 45402459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 195
Target Start/End: Original strand, 50405608 - 50405705
Alignment:
Q  98 gcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaaccc 195  Q
    |||| |||||||| | ||| || | ||| ||||||||| | ||||||| |||||||||||||||||  ||||||||||| | ||| ||||| ||||||    
T  50405608 gcaccggtttccgacccaccaatggtgggcgactaatccgactcgtgcgtagaggcatgcgcactggtcaagcgttgtttcccctcggaatcgaaccc 50405705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 219
Target Start/End: Complemental strand, 33689028 - 33688932
Alignment:
Q  123 tggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttgg 219  Q
    |||| |||||| | ||||| ||| ||||||||||||||||| ||||| ||| |||| | | ||||| ||||||| |||| | | |||||||||||||    
T  33689028 tggatgactaaactggctcatgcgtagaggcatgcgcactggccaagtgttattccccttaggaattgaacccgatattcccccgatacgtccttgg 33688932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 246
Target Start/End: Original strand, 45450472 - 45450597
Alignment:
Q  118 aaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtcctt 217  Q
    |||| |||||||||||||  |||  ||| |||||||||||||||||  ||||| ||||||| ||||| |||  ||||| |||||  |||||||||| |||    
T  45450472 aaaggtggacgactaatctagcttatgcgtagaggcatgcgcactggtcaagcattgttcc-cctggaaatcaaacccagtattctacggatacgt-ctt 45450569  T
Q  218 ggtaggagctccttgccaccggagcccaa 246  Q
    || | ||||| |||||||| |||||||||    
T  45450570 ggaatgagct-cttgccactggagcccaa 45450597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 176
Target Start/End: Complemental strand, 2668167 - 2668085
Alignment:
Q  94 tttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgtt 176  Q
    |||||||||| |||||  | |||||||| ||  |||||||||  |||| ||| ||||||||||||||||| ||||| ||||||    
T  2668167 tttcgcactgatttccaacccactaaaggtgagcgactaatccagctcttgcgtagaggcatgcgcactggccaagtgttgtt 2668085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 165 - 247
Target Start/End: Complemental strand, 10043184 - 10043103
Alignment:
Q  165 ccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaaa 247  Q
    |||||| |||||| || ||||||| ||||||| |||| | ||||||||||||||  |||||||| ||||||  ||||||||||    
T  10043184 ccaagcattgttc-tcttgggaatcgaacccgatattccccggatacgtccttgaaaggagctcattgccagtggagcccaaa 10043103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 128 - 178
Target Start/End: Complemental strand, 13367496 - 13367446
Alignment:
Q  128 gactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcc 178  Q
    |||||||| ||||| ||| || |||||||| ||||||||||||||||||||    
T  13367496 gactaatccggctcatgcgtaaaggcatgcacactgaccaagcgttgttcc 13367446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 118 - 176
Target Start/End: Original strand, 43330757 - 43330815
Alignment:
Q  118 aaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgtt 176  Q
    |||| ||| ||||||||| ||||||||| |||||||||||||||||  |||| ||||||    
T  43330757 aaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggtcaagtgttgtt 43330815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 477 - 519
Target Start/End: Original strand, 47764931 - 47764973
Alignment:
Q  477 tgaacctacaatgctacaacaggttaaggtagaagacatgaat 519  Q
    |||||||||||| |||||| ||||||||| |||||||||||||    
T  47764931 tgaacctacaatactacaataggttaaggcagaagacatgaat 47764973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 183
Target Start/End: Original strand, 2029268 - 2029357
Alignment:
Q  94 tttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctg 183  Q
    |||||||||||||| || | ||  || | ||| |||||||||  |||| ||| |||||||||||| ||| ||||||||||||| ||||||    
T  2029268 tttcgcactggtttgcgacccatcaatggtgggcgactaatccagctcatgcgtagaggcatgcgtactaaccaagcgttgtttctcctg 2029357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 232
Target Start/End: Complemental strand, 6286177 - 6286093
Alignment:
Q  147 tagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggagctccttg 232  Q
    ||||||||||||||||| | ||| ||||||||| |||| ||| ||| | |||||| | | ||||| ||||||| ||||||||||||    
T  6286177 tagaggcatgcgcactgtc-aagtgttgttccttctggaaatcgaatctggtattcccctgatacttccttggaaggagctccttg 6286093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 247
Target Start/End: Original strand, 30735018 - 30735099
Alignment:
Q  166 caagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaaa 247  Q
    ||||||||||||| |||| |||| |||| ||||||| | ||  | ||||||||| | ||||||||||||||  |||||||||    
T  30735018 caagcgttgttccccctgagaatcgaactcggtattccccgagtgcgtccttggaatgagctccttgccactagagcccaaa 30735099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 100; Significance: 5e-49; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 79 - 246
Target Start/End: Complemental strand, 21898773 - 21898606
Alignment:
Q  79 ttttttattcttgggtttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcc 178  Q
    |||||| || |||| |||||||| |||||||| | |||||||| || |||||||||| ||||| ||| ||||||||||||||||| ||||||||||||||    
T  21898773 ttttttttttttggctttcgcaccggtttccgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttcc 21898674  T
Q  179 tcctgggaatagaacccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaa 246  Q
    |||||||||| |||||||||||| | ||||||||||||||| |||||||||||||||| |||||||||    
T  21898673 tcctgggaatcgaacccggtattccccggatacgtccttggaaggagctccttgccactggagcccaa 21898606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 89 - 247
Target Start/End: Original strand, 14107353 - 14107511
Alignment:
Q  89 ttgggtttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaat 188  Q
    |||| |||||||| |||||||| | ||||||  |||| ||||||||| ||||| ||| |||||||||| ||||||  |||||||||||||||||||||||    
T  14107353 ttggctttcgcaccggtttccgacccactaataatgggcgactaatccggctcatgcgtagaggcatgtgcactggtcaagcgttgttcctcctgggaat 14107452  T
Q  189 agaacccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaaa 247  Q
     |||||||||||| | || ||||||| |||| |||||||||||||||| ||||||||||    
T  14107453 cgaacccggtattccccgaatacgtctttggaaggagctccttgccactggagcccaaa 14107511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 89 - 246
Target Start/End: Complemental strand, 13469048 - 13468891
Alignment:
Q  89 ttgggtttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaat 188  Q
    |||| |||||||| |||||||  | ||| || | ||| ||||||||| ||||||||| |||||||||| ||||||||||| ||||||||| ||| |||||    
T  13469048 ttggctttcgcaccggtttccaacccaccaatggtgggcgactaatctggctcgtgcgtagaggcatgtgcactgaccaatcgttgttccccctaggaat 13468949  T
Q  189 agaacccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaa 246  Q
     ||||| |||||| | ||||||||||||||| ||||||||||||||||| ||||||||    
T  13468948 tgaacctggtattccccggatacgtccttggaaggagctccttgccaccagagcccaa 13468891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 94 - 246
Target Start/End: Original strand, 5253223 - 5253375
Alignment:
Q  94 tttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaac 193  Q
    |||||||| |||||||| | ||| |||| ||| ||| ||||| ||||| ||| ||||||||||||||||| ||||| |||||||| ||||||||| ||||    
T  5253223 tttcgcaccggtttccgacccaccaaaggtgggcgattaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaac 5253322  T
Q  194 ccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaa 246  Q
    |||||||| | ||| ||||||||||| |||||||||||||||  |||||||||    
T  5253323 ccggtattccccgggtacgtccttggaaggagctccttgccattggagcccaa 5253375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 79 - 236
Target Start/End: Original strand, 6606082 - 6606239
Alignment:
Q  79 ttttttattcttgggtttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcc 178  Q
    |||||| || |||| |||||||| |||||||| | ||| || | ||||||||||||| ||||| ||| ||||||||||  ||||| ||||| ||||||||    
T  6606082 ttttttttttttggctttcgcaccggtttccgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgtacactggccaagtgttgttcc 6606181  T
Q  179 tcctgggaatagaacccggtatttcacggatacgtccttggtaggagctccttgccac 236  Q
     |||| |||| |||||||||||| | ||||||||||||||| ||||||||||||||||    
T  6606182 ccctgagaatcgaacccggtattccccggatacgtccttggaaggagctccttgccac 6606239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 89 - 246
Target Start/End: Original strand, 29444760 - 29444917
Alignment:
Q  89 ttgggtttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaat 188  Q
    |||| ||||||||| ||||||| | ||| |||||||||| ||||||| ||||| ||| ||||||||||||||||| |||||||||||||| ||| | |||    
T  29444760 ttggctttcgcactagtttccgacccaccaaagatggacaactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttccccctagaaat 29444859  T
Q  189 agaacccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaa 246  Q
     |||||||||||  | ||| |||||| |||| ||||||||||||||||  ||||||||    
T  29444860 cgaacccggtatcccccgggtacgtctttggaaggagctccttgccactagagcccaa 29444917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 80 - 246
Target Start/End: Complemental strand, 12606554 - 12606388
Alignment:
Q  80 tttttattcttgggtttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcct 179  Q
    ||||| || |||| |||||||| ||||||| || ||| |||| ||| ||||||||| ||||||||| ||||||||||||||||| |||| |||||||||     
T  12606554 tttttttttttggctttcgcaccggtttccagctcaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaaacgttgttccc 12606455  T
Q  180 cctgggaatagaacccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaa 246  Q
    ||||| ||| ||| | |||||| | ||||||||| ||||| |||||||| |||||| | ||||||||    
T  12606454 cctggaaatcgaatctggtattccccggatacgttcttggaaggagctcattgccagcagagcccaa 12606388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 80 - 246
Target Start/End: Complemental strand, 19089622 - 19089456
Alignment:
Q  80 tttttattcttgggtttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcct 179  Q
    ||||| || |||| |||||||| |||||||| | ||| |||| | ||||||||||| ||||||||| ||||||||||| ||||| ||||| ||||||||     
T  19089622 tttttttttttggctttcgcaccggtttccgacccaccaaaggtagacgactaatccggctcgtgcgtagaggcatgctcactggccaagtgttgttccc 19089523  T
Q  180 cctgggaatagaacccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaa 246  Q
    |||||||||  |||| |||||| | ||||||||||||||  | ||||||||||| || |||||||||    
T  19089522 cctgggaatcaaacctggtattcctcggatacgtccttgaaatgagctccttgcgactggagcccaa 19089456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 94 - 246
Target Start/End: Original strand, 13036004 - 13036156
Alignment:
Q  94 tttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaac 193  Q
    |||||||| |||||||| | ||| ||   ||||||||||||| ||||| ||| ||||||||||||||||| ||||| |||||||| ||||  ||| ||||    
T  13036004 tttcgcaccggtttccgacccaccaatagtggacgactaatctggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgaaaatcgaac 13036103  T
Q  194 ccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaa 246  Q
    ||| |||| | || |||||||||||| |||||||||||||||| |||||||||    
T  13036104 ccgatattccccgaatacgtccttggaaggagctccttgccactggagcccaa 13036156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 89 - 247
Target Start/End: Original strand, 8611969 - 8612127
Alignment:
Q  89 ttgggtttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaat 188  Q
    |||| |||||||| |||||| | | ||| |||| ||| ||||||||| || || ||| |||| |||||| |||||  ||||||||||||||||| |||||    
T  8611969 ttggctttcgcaccggtttctgacccaccaaaggtgggcgactaatccggttcatgcgtagaagcatgcacactggtcaagcgttgttcctcctcggaat 8612068  T
Q  189 agaacccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaaa 247  Q
     |||||||||||| | ||| ||||||||||| |||||||||||||||| |||| |||||    
T  8612069 cgaacccggtattccccgggtacgtccttggaaggagctccttgccactggagtccaaa 8612127  T

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Target: chr6; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 118 - 246
Target Start/End: Original strand, 2271327 - 2271453
Alignment:
Q  118 aaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtcctt 217  Q
    |||| ||||||||||||| ||||||||| ||||| ||||||||||| | |||||||||||   ||| |||| |||||||||||| | || ||||||||||    
T  2271327 aaaggtggacgactaatccggctcgtgcgtagagacatgcgcactggctaagcgttgttct--ctgagaatcgaacccggtattccccgaatacgtcctt 2271424  T
Q  218 ggtaggagctccttgccaccggagcccaa 246  Q
    || |||||||||||||||| |||||||||    
T  2271425 ggaaggagctccttgccactggagcccaa 2271453  T

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Target: chr6; HSP #12
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 80 - 236
Target Start/End: Original strand, 30788839 - 30788993
Alignment:
Q  80 tttttattcttgggtttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcct 179  Q
    ||||| || |||| |||||||| |||||||| | ||| |||| ||| ||||||||| ||||||||| ||||||||||||||||| |||| ||||||||      
T  30788839 tttttttttttggctttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcgtgcctagaggcatgcgcactggccaaacgttgttc-- 30788936  T
Q  180 cctgggaatagaacccggtatttcacggatacgtccttggtaggagctccttgccac 236  Q
    | || ||||  |||||| |||| | ||||||| ||||||| ||||||||||||||||    
T  30788937 catgagaatcaaacccgatattccccggatacatccttggaaggagctccttgccac 30788993  T

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Target: chr6; HSP #13
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 94 - 246
Target Start/End: Complemental strand, 3601194 - 3601042
Alignment:
Q  94 tttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaac 193  Q
    |||||||| |||||||| | ||| |||| ||||||||||||| ||||||||  || |||||||||||||| |||||||||||||| |||| |||| |||     
T  3601194 tttcgcaccggtttccgacccaccaaaggtggacgactaatccggctcgtgtgtataggcatgcgcactggccaagcgttgttccccctgagaatcgaaa 3601095  T
Q  194 ccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaa 246  Q
    |||||||| | || ||||||  |||| | |||||| |||||||  ||||||||    
T  3601094 ccggtattccccgaatacgtatttggaaagagctctttgccactagagcccaa 3601042  T

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Target: chr6; HSP #14
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 89 - 239
Target Start/End: Complemental strand, 12635929 - 12635779
Alignment:
Q  89 ttgggtttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaat 188  Q
    |||| |||||||| |||||||| | ||| ||   ||| ||||||||| |||| |||| ||||||||||||||||  |||||||||||| | |||||||||    
T  12635929 ttggctttcgcaccggtttccgacccaccaatagtgggcgactaatccggcttgtgcgtagaggcatgcgcactagccaagcgttgtttcccctgggaat 12635830  T
Q  189 agaacccggtatttcacggatacgtccttggtaggagctccttgccaccgg 239  Q
      |||| |||||| | ||||||||||||||| ||||||  |||||||||||    
T  12635829 caaacctggtattccccggatacgtccttggaaggagcatcttgccaccgg 12635779  T

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Target: chr6; HSP #15
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 124 - 246
Target Start/End: Original strand, 24671896 - 24672018
Alignment:
Q  124 ggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtagg 223  Q
    |||| ||||||| |||| |||| ||||||||||| |||||  |||| ||||||||  |||||||||||||||||||||   | ||||||||||||  |||    
T  24671896 ggactactaatccggcttgtgcgtagaggcatgcacactggtcaagtgttgttccctctgggaatagaacccggtattctccagatacgtccttgaaagg 24671995  T
Q  224 agctccttgccaccggagcccaa 246  Q
    ||||||||||||| |||||||||    
T  24671996 agctccttgccactggagcccaa 24672018  T

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Target: chr6; HSP #16
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 94 - 247
Target Start/End: Complemental strand, 8938821 - 8938668
Alignment:
Q  94 tttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaac 193  Q
    |||||||| |||||||| | ||  |||| ||||||||||||  ||||| ||| |||| || |||||||||  |||| |||||||||||||||||| ||||    
T  8938821 tttcgcaccggtttccgacccatcaaaggtggacgactaattcggctcatgcgtagatgcttgcgcactggtcaagtgttgttcctcctgggaatcgaac 8938722  T
Q  194 ccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaaa 247  Q
    |  ||||| | |||||| ||| |||| |||||||||||| ||| ||||||||||    
T  8938721 caagtattccccggatatgtctttggaaggagctccttgtcactggagcccaaa 8938668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 94 - 235
Target Start/End: Original strand, 34954619 - 34954760
Alignment:
Q  94 tttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaac 193  Q
    ||||||| ||||||||| | ||  |||| ||||||||||||| ||||| ||| |||||| ||| |||||| |||| ||||||||| |||| |||| ||||    
T  34954619 tttcgcattggtttccgacccatcaaaggtggacgactaatctggctcatgcgtagaggtatgtgcactggccaaacgttgttccccctgagaatcgaac 34954718  T
Q  194 ccggtatttcacggatacgtccttggtaggagctccttgcca 235  Q
    | |||||| | | | ||||||||||| |||||||||||||||    
T  34954719 ctggtattccccaggtacgtccttggaaggagctccttgcca 34954760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 89 - 241
Target Start/End: Complemental strand, 8932776 - 8932624
Alignment:
Q  89 ttgggtttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaat 188  Q
    |||| |||||||| |||||||| | ||  |||| |||  || ||||| ||||| ||| ||||||||||||||||  ||||| |||||||| |||||||||    
T  8932776 ttggctttcgcaccggtttccgacccatcaaaggtgggtgattaatccggctcatgcgtagaggcatgcgcactagccaagtgttgttccccctgggaat 8932677  T
Q  189 agaacccggtatttcacggatacgtccttggtaggagctccttgccaccggag 241  Q
     ||||||| |||| | ||||||| ||||||| |||| ||||||||||| ||||    
T  8932676 cgaacccgatattccccggatacatccttggaaggaactccttgccactggag 8932624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 89 - 241
Target Start/End: Complemental strand, 8944242 - 8944090
Alignment:
Q  89 ttgggtttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaat 188  Q
    |||| |||||||| |||||||| | ||  |||| |||  || ||||| ||||| ||| ||||||||||||||||  ||||| |||||||| |||||||||    
T  8944242 ttggctttcgcaccggtttccgacccatcaaaggtgggtgattaatccggctcatgcgtagaggcatgcgcactagccaagtgttgttccccctgggaat 8944143  T
Q  189 agaacccggtatttcacggatacgtccttggtaggagctccttgccaccggag 241  Q
     ||||||| |||| | ||||||| ||||||| |||| ||||||||||| ||||    
T  8944142 cgaacccgatattccccggatacatccttggaaggaactccttgccactggag 8944090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 139 - 246
Target Start/End: Original strand, 10311514 - 10311621
Alignment:
Q  139 ctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggagctccttgccaccg 238  Q
    ||||||| ||||| ||||||||||| |||||||||||||| | || | || |||||||||||| | ||||||||| ||||| ||||||||||||| || |    
T  10311514 ctcgtgcgtagagacatgcgcactggccaagcgttgttccccttgaggatcgaacccggtattccccggatacgttcttggaaggagctccttgctactg 10311613  T
Q  239 gagcccaa 246  Q
    ||||||||    
T  10311614 gagcccaa 10311621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 121 - 247
Target Start/End: Original strand, 19230586 - 19230710
Alignment:
Q  121 gatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggt 220  Q
    |||| |||||||||| ||||||||| |||||||||||  ||||||||||||||||||| | ||  ||| ||| |||||| ||| ||  |||||||||||     
T  19230586 gatgaacgactaatccggctcgtgcgtagaggcatgcatactgaccaagcgttgttcc-cttgaaaatcgaatccggta-ttcccgagtacgtccttgga 19230683  T
Q  221 aggagctccttgccaccggagcccaaa 247  Q
    |||||||||||||||| ||||||||||    
T  19230684 aggagctccttgccactggagcccaaa 19230710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 118 - 247
Target Start/End: Original strand, 9179760 - 9179889
Alignment:
Q  118 aaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtcctt 217  Q
    |||| |||||||||||||  |||| ||| |||||| ||||  ||||  |||| |||||||| ||||||||| |||||||||||| |  || |||||||||    
T  9179760 aaaggtggacgactaatccagctcatgcgtagaggtatgcatactggtcaagtgttgttccccctgggaatcgaacccggtattccctgggtacgtcctt 9179859  T
Q  218 ggtaggagctccttgccaccggagcccaaa 247  Q
    || | |||||||||||||| ||||||||||    
T  9179860 ggaatgagctccttgccactggagcccaaa 9179889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 118 - 247
Target Start/End: Original strand, 29333163 - 29333291
Alignment:
Q  118 aaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtcctt 217  Q
    |||| ||||||||| ||  ||||| ||| ||||||||||||||||| |||| ||||||||| ||||| ||| |||||||||||| |  || |||||||||    
T  29333163 aaaggtggacgactgattcggctcatgcgtagaggcatgcgcactggccaaacgttgttcc-cctggaaatcgaacccggtattccctgggtacgtcctt 29333261  T
Q  218 ggtaggagctccttgccaccggagcccaaa 247  Q
    || |||||||| |||||||  |||||||||    
T  29333262 ggaaggagctcattgccactagagcccaaa 29333291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 89 - 177
Target Start/End: Original strand, 9633620 - 9633708
Alignment:
Q  89 ttgggtttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttc 177  Q
    |||| |||||||| |||||||| | ||| |||| ||| ||||||||| ||||||||| ||||||||||||||||| |||||||||||||    
T  9633620 ttggctttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttc 9633708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 143 - 246
Target Start/End: Original strand, 21016800 - 21016903
Alignment:
Q  143 tgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggagctccttgccaccggagc 242  Q
    ||||||||||||||| ||||||| ||| |||||||  | | ||||| |||||||||||| | ||| ||||||| ||| |||||||||||||||| |||||    
T  21016800 tgcatagaggcatgcacactgactaagtgttgttctccttaggaatcgaacccggtattccccgggtacgtccctggaaggagctccttgccactggagc 21016899  T
Q  243 ccaa 246  Q
    ||||    
T  21016900 ccaa 21016903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 125 - 247
Target Start/End: Original strand, 3587976 - 3588098
Alignment:
Q  125 gacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtagga 224  Q
    ||||||||||| || || ||| |||||| ||| |||||| |||||||||||||| | ||||||| ||||||||||||   |||||||||| |||| |  |    
T  3587976 gacgactaatccggttcatgcgtagaggtatgtgcactggccaagcgttgttccccttgggaatcgaacccggtattctccggatacgtctttggaataa 3588075  T
Q  225 gctccttgccaccggagcccaaa 247  Q
     |||||||||||  |||||||||    
T  3588076 actccttgccacttgagcccaaa 3588098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 247
Target Start/End: Complemental strand, 9147379 - 9147258
Alignment:
Q  126 acgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggag 225  Q
    |||||||||| ||||  ||| |||||||||| ||||||  |||| || ||||| ||||||||| ||||||| |||| | | | ||||||||||| | |||    
T  9147379 acgactaatccggcttatgcgtagaggcatgtgcactggtcaagtgtcgttccccctgggaatcgaacccgatattccccaggtacgtccttggaatgag 9147280  T
Q  226 ctccttgccaccggagcccaaa 247  Q
    |||||| |||| ||||||||||    
T  9147279 ctccttcccactggagcccaaa 9147258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 118 - 231
Target Start/End: Complemental strand, 33940097 - 33939984
Alignment:
Q  118 aaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtcctt 217  Q
    |||||||||||||||||| ||||||||  |||||||||||||| ||   |||  |||||||||||| ||||  ||||| ||||| | |||||||||||||    
T  33940097 aaagatggacgactaatccggctcgtgtgtagaggcatgcgcaatggttaagtattgttcctcctgagaatcaaacccagtattcctcggatacgtcctt 33939998  T
Q  218 ggtaggagctcctt 231  Q
     | || ||||||||    
T  33939997 agaagtagctcctt 33939984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 79 - 196
Target Start/End: Complemental strand, 5029942 - 5029825
Alignment:
Q  79 ttttttattcttgggtttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcc 178  Q
    |||||| || |||| ||||||||  ||||||| | ||  |||||||| |||||||||   ||| ||| |||||||||||||||||||||| ||||||||     
T  5029942 ttttttttttttggctttcgcaccagtttccgacccatcaaagatgggcgactaatccaactcatgcgtagaggcatgcgcactgaccaaacgttgttct 5029843  T
Q  179 tcctgggaatagaacccg 196  Q
     |||| |||| |||||||    
T  5029842 ccctgagaatcgaacccg 5029825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 169 - 246
Target Start/End: Complemental strand, 5759663 - 5759586
Alignment:
Q  169 gcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaa 246  Q
    |||||||||||||| |||||  |||||| |||| | ||| ||||||||||| ||||| |||||||||| |||||||||    
T  5759663 gcgttgttcctcctcggaatcaaacccgatattcctcgggtacgtccttggaaggagttccttgccactggagcccaa 5759586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 79 - 232
Target Start/End: Complemental strand, 11142728 - 11142575
Alignment:
Q  79 ttttttattcttgggtttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcc 178  Q
    |||||| || |||| |||||||| ||| |||| | ||| |||| ||||| ||||||| | ||| ||| |||||||||||||||||  ||| ||||||| |    
T  11142728 ttttttttttttggttttcgcaccggtctccgacccaccaaagttggacaactaatctgactcatgcgtagaggcatgcgcactggtcaaacgttgtttc 11142629  T
Q  179 tcctgggaatagaacccggtatttcacggatacgtccttggtaggagctccttg 232  Q
      ||| |||| |||| ||||||||| ||| || |||||||| | ||||| ||||    
T  11142628 cactgcgaatcgaactcggtatttcccgggtatgtccttggaatgagcttcttg 11142575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 246
Target Start/End: Original strand, 9366459 - 9366575
Alignment:
Q  130 ctaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggagctcc 229  Q
    |||||| ||||||||| ||||||||||||||||| ||||||||| |||| |||   ||| ||||| | |||| | |   ||| ||||||| |||||||||    
T  9366459 ctaatccggctcgtgcgtagaggcatgcgcactggccaagcgttattccccctaaaaatcgaacctgatattccccaagtacatccttggaaggagctcc 9366558  T
Q  230 ttgccaccggagcccaa 246  Q
    ||| ||| |||||||||    
T  9366559 ttgtcactggagcccaa 9366575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 169 - 247
Target Start/End: Original strand, 3030693 - 3030771
Alignment:
Q  169 gcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaaa 247  Q
    |||||||||| ||||||||| ||||||| |||| |    |||||||||||| | |||||||||||||| ||||||||||    
T  3030693 gcgttgttccccctgggaatcgaacccgatattcccgaaatacgtccttggaatgagctccttgccactggagcccaaa 3030771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 188
Target Start/End: Complemental strand, 31129287 - 31129193
Alignment:
Q  94 tttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaat 188  Q
    |||||||| |||||||| | ||| |||| || || ||||||| ||||| ||| ||||||||||||||||  |||||||||| ||| |||| ||||    
T  31129287 tttcgcaccggtttccgactcaccaaaggtgcacaactaatctggctcatgcgtagaggcatgcgcactagccaagcgttgctccccctgtgaat 31129193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 117 - 178
Target Start/End: Complemental strand, 13391373 - 13391312
Alignment:
Q  117 taaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcc 178  Q
    |||| |||| ||||||||| ||||||||| ||||||||||||||||| |||| | |||||||    
T  13391373 taaatatgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaaacattgttcc 13391312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 219
Target Start/End: Original strand, 13584441 - 13584575
Alignment:
Q  89 ttgggtttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgca----tagaggcatgcgcactgaccaagcgttgttcctcctgg 184  Q
    |||| |||||| | |||||||| | ||| |||| ||||||| ||||| ||||| ||||    ||||||||||||||||| |||| |||||||| || | |    
T  13584441 ttggctttcgcgccggtttccgacccaccaaaggtggacgattaatccggctcatgcatgcatagaggcatgcgcactggccaaacgttgttcatcttag 13584540  T
Q  185 gaatagaacccggtatttcacggatacgtccttgg 219  Q
    |||| ||||| |||||| | ||  |||||||||||    
T  13584541 gaatcgaacctggtattcctcgagtacgtccttgg 13584575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 178
Target Start/End: Complemental strand, 5333105 - 5333030
Alignment:
Q  103 ggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcc 178  Q
    ||||| |||| ||||||||||| |||||||||| ||||| ||  ||||| |||||||||||  |||| ||||||||    
T  5333105 ggttttcggcccactaaagatgaacgactaatctggctcatgtgtagagacatgcgcactggacaagtgttgttcc 5333030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 162
Target Start/End: Original strand, 14783415 - 14783488
Alignment:
Q  89 ttgggtttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcact 162  Q
    |||| |||||||| |||||||| | ||| || | ||||||||||||| ||||| ||| ||||||||||| ||||    
T  14783415 ttggctttcgcaccggtttccgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcacact 14783488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 193
Target Start/End: Complemental strand, 30410569 - 30410456
Alignment:
Q  80 tttttattcttgggtttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcct 179  Q
    |||||||| || | |||||||  |||||||| | ||| |||||||  ||| |||||  |||| ||| |||||||||||||||||   ||| |||||||||    
T  30410569 tttttattttttgctttcgcatcggtttccgacccaccaaagatgagcgattaatccagctcatgcgtagaggcatgcgcactggttaagtgttgttcct 30410470  T
Q  180 cctgggaatagaac 193  Q
    |||| |||| ||||    
T  30410469 cctgagaatcgaac 30410456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 92; Significance: 3e-44; HSPs: 70)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 79 - 246
Target Start/End: Original strand, 5731905 - 5732072
Alignment:
Q  79 ttttttattcttgggtttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcc 178  Q
    |||||| || |||| |||||||| |||||||| | |||||||| || |||||||||| ||||| | | ||||||||||||||||| ||||||||||||||    
T  5731905 ttttttttttttggctttcgcaccggtttccgacccactaaaggtgaacgactaatctggctcatacgtagaggcatgcgcactggccaagcgttgttcc 5732004  T
Q  179 tcctgggaatagaacccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaa 246  Q
    |||||||||| |||||||||||| | ||| ||||||||||| |||||||||||||||| |||||||||    
T  5732005 tcctgggaatcgaacccggtattccccgggtacgtccttggaaggagctccttgccactggagcccaa 5732072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 89 - 246
Target Start/End: Complemental strand, 42086439 - 42086282
Alignment:
Q  89 ttgggtttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaat 188  Q
    |||| |||||||| |||||||| | ||| |||| ||||||||||||| ||||| ||| |||||||||||||||||  ||||||||||||| |||||||||    
T  42086439 ttggctttcgcaccggtttccgacccaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactggtcaagcgttgttccccctgggaat 42086340  T
Q  189 agaacccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaa 246  Q
     |||||||||||| | ||| ||||||||||| ||||||||||||||||||||||||||    
T  42086339 cgaacccggtattcctcgggtacgtccttggaaggagctccttgccaccggagcccaa 42086282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 89 - 246
Target Start/End: Complemental strand, 19572836 - 19572679
Alignment:
Q  89 ttgggtttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaat 188  Q
    |||| ||||||||||||||||  | ||| || | || |||||||||| ||||| ||| ||||||||||||||||| ||||| |||||||| |||||||||    
T  19572836 ttggctttcgcactggtttccaacccaccaatggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaat 19572737  T
Q  189 agaacccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaa 246  Q
      ||||||||||| | ||||||||||||||| |||||||||||||||| |||||||||    
T  19572736 ctaacccggtattccccggatacgtccttggaaggagctccttgccactggagcccaa 19572679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 89 - 247
Target Start/End: Complemental strand, 1538543 - 1538385
Alignment:
Q  89 ttgggtttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaat 188  Q
    |||| |||||||| |||||||| | ||| || | ||||||| ||||| ||||| ||| ||||||||||||||||| ||||| |||||||| |||||||||    
T  1538543 ttggctttcgcaccggtttccgacccaccaatggtggacgattaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaat 1538444  T
Q  189 agaacccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaaa 247  Q
     |||||||||||| | || ||||||||| || |||||||||||||||| ||||||||||    
T  1538443 cgaacccggtattccccgaatacgtcctcggaaggagctccttgccactggagcccaaa 1538385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 128 - 250
Target Start/End: Original strand, 25417217 - 25417339
Alignment:
Q  128 gactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggagct 227  Q
    |||||||| ||||||| | ||||||||||||||||| |||||||||||||| ||||||||| |||||||||||| | ||  ||||||||||| |||||||    
T  25417217 gactaatccggctcgttcgtagaggcatgcgcactggccaagcgttgttccccctgggaatcgaacccggtattccccgagtacgtccttggaaggagct 25417316  T
Q  228 ccttgccaccggagcccaaaaac 250  Q
    ||||||||| |||||||||||||    
T  25417317 ccttgccactggagcccaaaaac 25417339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 94 - 246
Target Start/End: Complemental strand, 7866688 - 7866536
Alignment:
Q  94 tttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaac 193  Q
    |||||||||||||||   | ||| |||| ||| ||||||||| || |||||| ||||||||||| ||||| |||||||||||||||||| ||||| ||||    
T  7866688 tttcgcactggtttctaacccaccaaaggtgggcgactaatccggttcgtgcgtagaggcatgcacactggccaagcgttgttcctcctcggaatcgaac 7866589  T
Q  194 ccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaa 246  Q
    |||||||| | ||| ||||||||||| |||||||||||||||| |||| ||||    
T  7866588 ccggtattcctcgggtacgtccttggaaggagctccttgccactggagtccaa 7866536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 94 - 236
Target Start/End: Complemental strand, 8513626 - 8513484
Alignment:
Q  94 tttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaac 193  Q
    |||||||| |||||||| | ||| |||| ||||||||||||| ||||||||| |||||||||| |||||| |||||| ||||| | ||| ||||| ||||    
T  8513626 tttcgcaccggtttccgacccaccaaaggtggacgactaatctggctcgtgcgtagaggcatgtgcactggccaagcattgtttcccctaggaatcgaac 8513527  T
Q  194 ccggtatttcacggatacgtccttggtaggagctccttgccac 236  Q
    |||||||| | ||| ||||||||||| ||||||||||||||||    
T  8513526 ccggtattccccgggtacgtccttggaaggagctccttgccac 8513484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 80 - 247
Target Start/End: Complemental strand, 30349700 - 30349533
Alignment:
Q  80 tttttattcttgggtttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcct 179  Q
    ||||| || |||| |||||||| |||||||||| |||  ||| ||||||||||||   |||| ||||||||||||||||||||| |||| | |||||||     
T  30349700 tttttttttttggctttcgcaccggtttccggcccacctaaggtggacgactaattcagctcatgcatagaggcatgcgcactggccaatcattgttccc 30349601  T
Q  180 cctgggaatagaacccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaaa 247  Q
    ||| | |||  ||||||||||| | ||||||||||||||| |||| ||||||||||| ||||||||||    
T  30349600 cctagaaatcaaacccggtattccccggatacgtccttggaaggaactccttgccactggagcccaaa 30349533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 89 - 247
Target Start/End: Complemental strand, 9812984 - 9812826
Alignment:
Q  89 ttgggtttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaat 188  Q
    |||| |||||||| |||||| | | ||| |||| ||| ||||||||| || || ||| |||| |||||| ||||| |||||||||||||||||| |||||    
T  9812984 ttggctttcgcaccggtttctgacccaccaaaggtgggcgactaatccggttcatgcgtagaagcatgcacactggccaagcgttgttcctcctcggaat 9812885  T
Q  189 agaacccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaaa 247  Q
     |||||||||||| | ||| ||||||||||| |||||||||||||||| |||| |||||    
T  9812884 cgaacccggtattccccgggtacgtccttggaaggagctccttgccactggagtccaaa 9812826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 94 - 246
Target Start/End: Complemental strand, 20525945 - 20525793
Alignment:
Q  94 tttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaac 193  Q
    |||||||| ||||||||   ||| || | ||||||||||||| ||||| ||| ||||||||||||||||| | ||| |||||||| ||||||||| ||||    
T  20525945 tttcgcaccggtttccgatccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactggcgaagtgttgttccacctgggaatcgaac 20525846  T
Q  194 ccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaa 246  Q
    ||| |||| | ||||||| ||||||  |||||||||||||||| |||||||||    
T  20525845 ccgatattccccggatacatccttgaaaggagctccttgccactggagcccaa 20525793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 94 - 246
Target Start/End: Complemental strand, 37263347 - 37263196
Alignment:
Q  94 tttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaac 193  Q
    |||||||| ||||||||   || ||||| ||||||||||||| ||||||||| |||||||||||||| || |||||||||||||| |||| |||| ||||    
T  37263347 tttcgcaccggtttccgatccaataaaggtggacgactaatccggctcgtgcgtagaggcatgcgcattggccaagcgttgttcc-cctgagaatcgaac 37263249  T
Q  194 ccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaa 246  Q
    ||| |||| | ||| ||||||||| | |||| ||||||||||| |||||||||    
T  37263248 ccgatattccccgggtacgtccttagaaggaactccttgccactggagcccaa 37263196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 89 - 247
Target Start/End: Complemental strand, 12705126 - 12704968
Alignment:
Q  89 ttgggtttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaat 188  Q
    |||| |||||||| |||||| | | ||| |||| ||| ||||||||| || || ||| |||| |||||| |||||  ||||||||||||||||| |||||    
T  12705126 ttggctttcgcaccggtttctgacccaccaaaggtgggcgactaatccggttcatgcgtagaagcatgcacactggtcaagcgttgttcctcctcggaat 12705027  T
Q  189 agaacccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaaa 247  Q
     |||||||||||| | ||| ||||||||||| |||||||||||||||| |||| |||||    
T  12705026 cgaacccggtattccccgggtacgtccttggaaggagctccttgccactggagtccaaa 12704968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 89 - 247
Target Start/End: Original strand, 41163455 - 41163612
Alignment:
Q  89 ttgggtttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaat 188  Q
    |||| ||||||||  ||||||| | ||| |||| |||||||||||||  |||| ||| ||||| |||| |||||| |||| ||||||||| |||||||||    
T  41163455 ttggctttcgcaccagtttccgacccacaaaaggtggacgactaatccagctcatgcgtagagacatgtgcactggccaaacgttgttcc-cctgggaat 41163553  T
Q  189 agaacccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaaa 247  Q
     |||||||||||| | ||| ||||| ||||| |||||||||||||||| ||||||||||    
T  41163554 cgaacccggtattccccgggtacgttcttggaaggagctccttgccactggagcccaaa 41163612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 118 - 247
Target Start/End: Complemental strand, 5079414 - 5079285
Alignment:
Q  118 aaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtcctt 217  Q
    |||| ||| ||||||||| ||||||||| |||| ||||||||| |||||||||| |||||| ||||| |||  | ||||||||| ||||||||||| |||    
T  5079414 aaaggtgggcgactaatccggctcgtgcgtagaagcatgcgcattgaccaagcgctgttccccctggaaatcaaccccggtattccacggatacgtgctt 5079315  T
Q  218 ggtaggagctccttgccaccggagcccaaa 247  Q
    || |||||||| ||||||||||| ||||||    
T  5079314 ggaaggagctctttgccaccggaacccaaa 5079285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 137 - 246
Target Start/End: Complemental strand, 28857192 - 28857083
Alignment:
Q  137 ggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggagctccttgccac 236  Q
    ||||| ||| ||||||||||||||||| ||||| |||||||| ||||||||| |||||||||||| | ||| | ||||||||| ||||||||||||||||    
T  28857192 ggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaacccggtattccccgggtgcgtccttggaaggagctccttgccac 28857093  T
Q  237 cggagcccaa 246  Q
     |||||||||    
T  28857092 tggagcccaa 28857083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 79 - 236
Target Start/End: Original strand, 38897704 - 38897860
Alignment:
Q  79 ttttttattcttgggtttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcc 178  Q
    |||||| || |||| |||||||||||||||||   ||| |||| ||| | ||||||| ||||||||| ||||||||||||||||| ||||||||||||||    
T  38897704 ttttttttttttggctttcgcactggtttccgatccaccaaaggtgggcaactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttcc 38897803  T
Q  179 tcctgggaatagaacccggtatttcacggatacgtccttggtaggagctccttgccac 236  Q
     ||||| ||| |||||||||||| | |  |||||||||||  | ||||||||||||||    
T  38897804 -cctggaaatcgaacccggtattccccatatacgtccttgtaaagagctccttgccac 38897860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 89 - 201
Target Start/End: Complemental strand, 9805116 - 9805004
Alignment:
Q  89 ttgggtttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaat 188  Q
    |||| ||||||||  ||||||| | ||| |||| ||||||||||||| ||||| ||| ||||||||||||||||| |||||||||||||| |||||||||    
T  9805116 ttggctttcgcacctgtttccgacccaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttccccctgggaat 9805017  T
Q  189 agaacccggtatt 201  Q
     ||||||||||||    
T  9805016 cgaacccggtatt 9805004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 147 - 247
Target Start/End: Original strand, 18136333 - 18136433
Alignment:
Q  147 tagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaa 246  Q
    ||||||||||| ||||||||||| |||||||| ||||||||| ||||||||||||   |||||||||| |||| |||||||||||||||| |||||||||    
T  18136333 tagaggcatgcacactgaccaagtgttgttccccctgggaatcgaacccggtattctccggatacgtctttggaaggagctccttgccactggagcccaa 18136432  T
Q  247 a 247  Q
    |    
T  18136433 a 18136433  T

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Target: chr5; HSP #19
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 89 - 236
Target Start/End: Complemental strand, 12766243 - 12766096
Alignment:
Q  89 ttgggtttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaat 188  Q
    |||| |||||||| |||||| | | ||| |||| ||| ||||||||| || || ||| ||||||||||| ||||| |||||| |||||||||||  ||||    
T  12766243 ttggctttcgcaccggtttctgacccaccaaaggtgggcgactaatctggttcatgcgtagaggcatgcacactggccaagcattgttcctcctcagaat 12766144  T
Q  189 agaacccggtatttcacggatacgtccttggtaggagctccttgccac 236  Q
     |||||||||||| | ||| ||||||||||| ||||||||||||||||    
T  12766143 cgaacccggtattccccgggtacgtccttggaaggagctccttgccac 12766096  T

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Target: chr5; HSP #20
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 118 - 233
Target Start/End: Original strand, 23247375 - 23247490
Alignment:
Q  118 aaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtcctt 217  Q
    |||| ||||||||||||| ||||||||| |||||||||||  ||||| ||||||||||||||||||||||| ||||||| |||| | | | |||||||||    
T  23247375 aaaggtggacgactaatctggctcgtgcgtagaggcatgcatactgatcaagcgttgttcctcctgggaatcgaacccgatattccccaggtacgtcctt 23247474  T
Q  218 ggtaggagctccttgc 233  Q
    || | |||||||||||    
T  23247475 ggaatgagctccttgc 23247490  T

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Target: chr5; HSP #21
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 94 - 236
Target Start/End: Original strand, 14588617 - 14588759
Alignment:
Q  94 tttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaac 193  Q
    |||||||| ||||| |||| ||| |||| ||||||||||||| ||||| ||| |||||||||||||||||  |||||||| |||||||||  ||| ||||    
T  14588617 tttcgcaccggttttcggctcaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactggtcaagcgttattcctcctgaaaatcgaac 14588716  T
Q  194 ccggtatttcacggatacgtccttggtaggagctccttgccac 236  Q
    ||| |||| | | ||||||||||||  || |||||||||||||    
T  14588717 ccgatattccccagatacgtccttgaaagaagctccttgccac 14588759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 94 - 247
Target Start/End: Complemental strand, 23383764 - 23383602
Alignment:
Q  94 tttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaac 193  Q
    ||||||||  ||||||| | ||| |||| |||||||||||||  |||| ||| |||||||| |||||||| |||||||||||||| ||||||||| ||||    
T  23383764 tttcgcaccagtttccgacccaccaaaggtggacgactaatccagctcatgcgtagaggcaagcgcactggccaagcgttgttccccctgggaatcgaac 23383665  T
Q  194 ccggtatttc------acg---gatacgtccttggtaggagctccttgccaccggagcccaaa 247  Q
    |||||||| |      |||   ||||||||||||| |||||||||||||||| ||||||||||    
T  23383664 ccggtattcctctgatacgtctgatacgtccttggaaggagctccttgccactggagcccaaa 23383602  T

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Target: chr5; HSP #23
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 152 - 247
Target Start/End: Complemental strand, 1899050 - 1898955
Alignment:
Q  152 gcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaaa 247  Q
    |||||||||||| |||||||||||||| ||||||||| |||||||||||| | ||| ||| ||||||| |||||||||||||||| | ||||||||    
T  1899050 gcatgcgcactggccaagcgttgttccccctgggaatcgaacccggtattccccgggtacatccttggaaggagctccttgccactgtagcccaaa 1898955  T

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Target: chr5; HSP #24
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 78 - 245
Target Start/End: Original strand, 4016239 - 4016406
Alignment:
Q  78 gttttttattcttgggtttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttc 177  Q
    ||||||| || |||| ||||||||||||||||| | ||| || | ||  | ||||||| ||||||||  ||||||||||||||||| ||||| |||||||    
T  4016239 gttttttttttttggctttcgcactggtttccgacccaccaatggtgagcaactaatccggctcgtgtgtagaggcatgcgcactggccaagtgttgttc 4016338  T
Q  178 ctcctgggaatagaacccggtatttcacggatacgtccttggtaggagctccttgccaccggagccca 245  Q
    | ||||  ||| ||||||| |||||| | | ||||||||||| | ||||| |||||||| ||||||||    
T  4016339 cccctgataatcgaacccgatatttctcaggtacgtccttggaatgagcttcttgccactggagccca 4016406  T

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Target: chr5; HSP #25
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 89 - 236
Target Start/End: Complemental strand, 13664372 - 13664225
Alignment:
Q  89 ttgggtttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaat 188  Q
    |||| |||||||| |||||||| ||||| |||| ||  ||| ||||| ||||| ||| ||||||||||||||||| ||||| |||||||| ||||  |||    
T  13664372 ttggctttcgcaccggtttccgacacaccaaaggtgatcgattaatctggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgataat 13664273  T
Q  189 agaacccggtatttcacggatacgtccttggtaggagctccttgccac 236  Q
     ||| |||||||| |   ||||||||||||| ||||||||||||||||    
T  13664272 cgaatccggtattccctagatacgtccttggaaggagctccttgccac 13664225  T

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Target: chr5; HSP #26
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 140 - 247
Target Start/End: Original strand, 35403558 - 35403665
Alignment:
Q  140 tcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggagctccttgccaccgg 239  Q
    |||||| ||||| |||||||| || |||||||||||||| |||  |||| |||||||||||||| ||  ||||||||||| |||||||||||||||| ||    
T  35403558 tcgtgcgtagagacatgcgcattggccaagcgttgttcccccttagaatcgaacccggtatttcccgagtacgtccttggaaggagctccttgccactgg 35403657  T
Q  240 agcccaaa 247  Q
    ||||||||    
T  35403658 agcccaaa 35403665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 118 - 236
Target Start/End: Complemental strand, 30995204 - 30995086
Alignment:
Q  118 aaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtcctt 217  Q
    |||||||  ||||||||| ||||||||| ||||||||||||| ||| ||||| |||||||| ||||||||| ||||| |||||| | |   |||||||||    
T  30995204 aaagatgagcgactaatccggctcgtgcgtagaggcatgcgccctggccaagtgttgttccccctgggaatcgaacctggtattccccatgtacgtcctt 30995105  T
Q  218 ggtaggagctccttgccac 236  Q
    || ||||||||||||||||    
T  30995104 ggaaggagctccttgccac 30995086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 127 - 236
Target Start/End: Original strand, 7308397 - 7308506
Alignment:
Q  127 cgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggagc 226  Q
    ||||||||| ||||| ||| |||||||||| |||||| |||||||||||||| ||||||||| ||||||| |||| | |  |||||||||||| | ||||    
T  7308397 cgactaatccggctcatgcgtagaggcatgtgcactgcccaagcgttgttccccctgggaatcgaacccgatattcctcaaatacgtccttggaatgagc 7308496  T
Q  227 tccttgccac 236  Q
    ||||||||||    
T  7308497 tccttgccac 7308506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 94 - 246
Target Start/End: Original strand, 20682617 - 20682770
Alignment:
Q  94 tttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaac 193  Q
    |||||||| |||||||  | |||||||| ||| ||| ||||| ||||||||| ||||||||||||||||| |||||||||||||| ||||| |||  |||    
T  20682617 tttcgcaccggtttccaacccactaaaggtggtcgattaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttccccctggaaatctaac 20682716  T
Q  194 ccggtatttcacggatacgtccttggta-ggagctccttgccaccggagcccaa 246  Q
    ||  |||| | ||| ||||||||| | | ||||||||||| ||| |||||||||    
T  20682717 ccaatattccccgggtacgtccttagaatggagctccttgtcactggagcccaa 20682770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 79 - 247
Target Start/End: Original strand, 42861203 - 42861371
Alignment:
Q  79 ttttttattcttgggtttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcc 178  Q
    |||||| || |||| |||||||| ||| |||| | ||| || | ||||||| ||||| ||||| ||| ||||||||||||||||| ||||| |||||| |    
T  42861203 ttttttttttttggctttcgcaccggtctccgacccaccaatggtggacgattaatccggctcatgcgtagaggcatgcgcactggccaagtgttgtttc 42861302  T
Q  179 tcctggg-aatagaacccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaaa 247  Q
     |||||| ||| ||||||| |||| | |||||| |||||||| | |||||||||||||| ||||||||||    
T  42861303 -cctgggaaattgaacccgatattccccggatatgtccttggaatgagctccttgccactggagcccaaa 42861371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 114 - 242
Target Start/End: Original strand, 9168273 - 9168399
Alignment:
Q  114 cactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgt 213  Q
    |||||||| ||||||||||||| ||||| ||| |||||| |||||||||| ||||||||||||||| |||||||| |  | ||||||| | |||||||||    
T  9168273 cactaaaggtggacgactaatccggctcatgcgtagaggtatgcgcactggccaagcgttgttcct-ctgggaatcgttctcggtattccccggatacgt 9168371  T
Q  214 ccttggtaggagctccttgccaccggagc 242  Q
    | |||| ||||| |||||||||| |||||    
T  9168372 ctttggaaggag-tccttgccactggagc 9168399  T

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Target: chr5; HSP #32
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 105 - 217
Target Start/End: Complemental strand, 12082004 - 12081892
Alignment:
Q  105 tttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttca 204  Q
    |||||| | ||| |||| ||||||||||||  ||||||||| |||| |||||||||||| |||||||||||||| |||| |||| |||||| ||||| |     
T  12082004 tttccgactcaccaaaggtggacgactaattcggctcgtgcgtagatgcatgcgcactggccaagcgttgttccccctgagaatcgaacccagtattccc 12081905  T
Q  205 cggatacgtcctt 217  Q
    |||||||||||||    
T  12081904 cggatacgtcctt 12081892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 147 - 236
Target Start/End: Original strand, 11845854 - 11845943
Alignment:
Q  147 tagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggagctccttgccac 236  Q
    ||||||||||||||||| |||| ||||||||| ||| | ||| ||||||| |||||| ||| ||||||||||| ||||||||||||||||    
T  11845854 tagaggcatgcgcactggccaaacgttgttccccctcgaaatcgaacccgatatttctcgggtacgtccttggaaggagctccttgccac 11845943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 118 - 247
Target Start/End: Complemental strand, 26077224 - 26077095
Alignment:
Q  118 aaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtcctt 217  Q
    |||||||  ||| ||||| ||||||||| |||||||||| |||||| ||||||||||||||  |||||||| |||||  ||||| | |  ||||||||||    
T  26077224 aaagatgagcgattaatctggctcgtgcgtagaggcatgtgcactggccaagcgttgttccctctgggaatcgaacctagtattccccaaatacgtcctt 26077125  T
Q  218 ggtaggagctccttgccaccggagcccaaa 247  Q
    || | ||||||||| |||| ||||||||||    
T  26077124 ggaatgagctccttaccactggagcccaaa 26077095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 118 - 201
Target Start/End: Original strand, 42291529 - 42291612
Alignment:
Q  118 aaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatt 201  Q
    |||| ||||||||||||| ||||||||| |||||||||| |||||| |||||||||||||  |||||||||  |||||||||||    
T  42291529 aaaggtggacgactaatccggctcgtgcgtagaggcatgtgcactggccaagcgttgttcaccctgggaatcaaacccggtatt 42291612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 118 - 247
Target Start/End: Original strand, 3653938 - 3654065
Alignment:
Q  118 aaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtcctt 217  Q
    |||| ||||||||||||| | ||||||| |||||||||||||||||  ||||||||||||   || ||||| ||||||||||||   ||| |||||||||    
T  3653938 aaaggtggacgactaatccgcctcgtgcgtagaggcatgcgcactggtcaagcgttgttc--tctaggaatcgaacccggtattctccgggtacgtcctt 3654035  T
Q  218 ggtaggagctccttgccaccggagcccaaa 247  Q
    || | |||||| ||| ||| ||||||||||    
T  3654036 ggaaagagctcattgtcactggagcccaaa 3654065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 118 - 228
Target Start/End: Complemental strand, 15034158 - 15034048
Alignment:
Q  118 aaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtcctt 217  Q
    |||| ||||| ||||||||||||| ||| ||||||||||| ||||||||||| |||||| | | ||| ||| |||||||||||| | ||| ||| |||||    
T  15034158 aaaggtggacaactaatcaggctcatgcgtagaggcatgcacactgaccaagtgttgtttcccatggaaattgaacccggtattccccgggtacatcctt 15034059  T
Q  218 ggtaggagctc 228  Q
    || ||||||||    
T  15034058 ggaaggagctc 15034048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 128 - 201
Target Start/End: Original strand, 35006769 - 35006842
Alignment:
Q  128 gactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatt 201  Q
    |||||||| ||||||||| ||||||||||| ||||||||||||||||||||  || ||||| ||||||||||||    
T  35006769 gactaatctggctcgtgcgtagaggcatgcacactgaccaagcgttgttccctctcggaatggaacccggtatt 35006842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 140 - 242
Target Start/End: Complemental strand, 28862886 - 28862784
Alignment:
Q  140 tcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggagctccttgccaccgg 239  Q
    |||||| |||||||||| ||| || |||||||||||||| |||| |||| ||||| | |||| | || ||||||| |||| |||||||||||||||| ||    
T  28862886 tcgtgcgtagaggcatgtgcattggccaagcgttgttccgcctgagaatcgaacctgatattccccgaatacgtctttggaaggagctccttgccactgg 28862787  T
Q  240 agc 242  Q
    |||    
T  28862786 agc 28862784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 118 - 236
Target Start/End: Original strand, 17693365 - 17693475
Alignment:
Q  118 aaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtcctt 217  Q
    ||||| |||||||||||| ||||| ||| ||||||||||||        |||||||||||||||||||||| |||||||||| | | ||  |||||||||    
T  17693365 aaagacggacgactaatctggctcatgcgtagaggcatgcg--------aagcgttgttcctcctgggaattgaacccggtactccccgagtacgtcctt 17693456  T
Q  218 ggtaggagctccttgccac 236  Q
    || ||| ||||||||||||    
T  17693457 ggaaggggctccttgccac 17693475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 94 - 247
Target Start/End: Complemental strand, 20255476 - 20255323
Alignment:
Q  94 tttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaac 193  Q
    ||||||||  ||||||| | ||| |||| ||||||||||||| | ||| ||| |||||||||||||||||  |||| ||||||| ||||| |    || |    
T  20255476 tttcgcaccagtttccgactcaccaaaggtggacgactaatccgactcatgcgtagaggcatgcgcactggtcaagtgttgttcgtcctgagttacgacc 20255377  T
Q  194 ccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaaa 247  Q
    |||||||| | ||  ||||||||| | | ||||||||||||||| |||||||||    
T  20255376 ccggtattccccgagtacgtccttagaatgagctccttgccaccagagcccaaa 20255323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 94 - 247
Target Start/End: Complemental strand, 20693040 - 20692887
Alignment:
Q  94 tttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaac 193  Q
    |||||||| |||||||| | ||| |||| ||||| ||||||| |  || |||| ||||||||| | |||| |||||||||||| |  || |||||  |||    
T  20693040 tttcgcaccggtttccgacccaccaaaggtggacaactaatctgaatcatgcacagaggcatgtgtactggccaagcgttgtttcctctaggaatcaaac 20692941  T
Q  194 ccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaaa 247  Q
    |||||||| | ||| ||||||||||| || ||||| |||||||  |||||||||    
T  20692940 ccggtattccccgggtacgtccttggaagaagctctttgccactagagcccaaa 20692887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 118 - 247
Target Start/End: Original strand, 35813022 - 35813151
Alignment:
Q  118 aaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtcctt 217  Q
    |||| ||||||||||||| | ||| ||  ||||| |||||||||||  ||||| || || | ||| ||||| |||||||||||| | ||| |||||||||    
T  35813022 aaaggtggacgactaatccgactcatgtgtagagacatgcgcactggtcaagcattatttcccctaggaatcgaacccggtattcctcgggtacgtcctt 35813121  T
Q  218 ggtaggagctccttgccaccggagcccaaa 247  Q
    || | ||||| |||||||||| ||||||||    
T  35813122 ggaatgagcttcttgccaccgcagcccaaa 35813151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 154 - 247
Target Start/End: Original strand, 38297024 - 38297117
Alignment:
Q  154 atgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaaa 247  Q
    ||||||||||||||| ||||||||| | ||||||| |||||||||||| | |   ||| ||||| | |||||||||||||||| ||||||||||    
T  38297024 atgcgcactgaccaaacgttgttccccttgggaattgaacccggtattcctcaagtacatccttagaaggagctccttgccactggagcccaaa 38297117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 123 - 243
Target Start/End: Complemental strand, 14152128 - 14152008
Alignment:
Q  123 tggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtag 222  Q
    ||||||| ||||| ||||| || ||||| |||||| ||||| ||||||||||||||   || |||| |||||||||||| | | | ||| || |||| ||    
T  14152128 tggacgattaatccggctcatggatagaagcatgcacactggccaagcgttgttccctatgagaatcgaacccggtattccccaggtacatcattggaag 14152029  T
Q  223 gagctccttgccaccggagcc 243  Q
    |||||||||||||| ||||||    
T  14152028 gagctccttgccactggagcc 14152008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 117 - 177
Target Start/End: Original strand, 24463909 - 24463969
Alignment:
Q  117 taaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttc 177  Q
    ||||| ||| ||||||||| ||||||||||||||||||||||||||| |||| ||||||||    
T  24463909 taaaggtgggcgactaatccggctcgtgcatagaggcatgcgcactggccaatcgttgttc 24463969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 201
Target Start/End: Original strand, 18262651 - 18262725
Alignment:
Q  127 cgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatt 201  Q
    ||||||||| ||||||||  |||||| ||||||||||  ||||||||||||| ||||  ||||||||||||||||    
T  18262651 cgactaatccggctcgtgtgtagaggtatgcgcactggtcaagcgttgttccccctgaaaatagaacccggtatt 18262725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 180 - 246
Target Start/End: Complemental strand, 28856998 - 28856932
Alignment:
Q  180 cctgggaatagaacccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaa 246  Q
    ||||||||| |||||||||||| | ||| | ||||||||| |||||||||||||||| |||||||||    
T  28856998 cctgggaatcgaacccggtattccccgggtgcgtccttggaaggagctccttgccactggagcccaa 28856932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 185 - 246
Target Start/End: Original strand, 6767142 - 6767203
Alignment:
Q  185 gaatagaacccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaa 246  Q
    |||| |||||||||||| | ||| ||||||||||| |||||||||||||||| |||||||||    
T  6767142 gaatcgaacccggtattccccgggtacgtccttggaaggagctccttgccactggagcccaa 6767203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 118 - 235
Target Start/End: Original strand, 14974348 - 14974465
Alignment:
Q  118 aaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtcctt 217  Q
    |||| ||||||||||||| ||||| ||| |||||||||| |||||| ||||  |||||||| | |  |||| ||||||| ||||   |||||||||||||    
T  14974348 aaaggtggacgactaatccggctcatgcgtagaggcatgtgcactggccaaatgttgttcccctttagaatcgaacccgatattctccggatacgtcctt 14974447  T
Q  218 ggtaggagctccttgcca 235  Q
     | | |||||||||||||    
T  14974448 agaatgagctccttgcca 14974465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 153 - 246
Target Start/End: Complemental strand, 16755109 - 16755016
Alignment:
Q  153 catgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaa 246  Q
    ||||||||||| ||||| |||||| ||||||  ||| |||||| ||||| | |||||||||| |||| | |||||||||||||| | |||||||    
T  16755109 catgcgcactggccaagtgttgtttctcctgaaaatcgaacccagtattccccggatacgtctttggaaagagctccttgccactgaagcccaa 16755016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 105 - 202
Target Start/End: Complemental strand, 19839423 - 19839326
Alignment:
Q  105 tttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtattt 202  Q
    |||||| | |||||||| | | ||||||||| | |||||   |||||||||||||||||| ||||||||||||||||||  ||| ||| |||||||||    
T  19839423 tttccgactcactaaaggtaggcgactaatctgactcgtatgtagaggcatgcgcactgatcaagcgttgttcctcctgaaaattgaatccggtattt 19839326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 118 - 247
Target Start/End: Complemental strand, 24499065 - 24498937
Alignment:
Q  118 aaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtcctt 217  Q
    |||||||||| | ||||| ||||||| | |||||||||||||||||| |||||||| ||  || | | ||| ||||||| ||||   | |||||||||||    
T  24499065 aaagatggactattaatccggctcgtacgtagaggcatgcgcactgatcaagcgttatt-ttcttagaaatcgaacccgatattctccagatacgtcctt 24498967  T
Q  218 ggtaggagctccttgccaccggagcccaaa 247  Q
    || ||||||||||||| ||  |||||||||    
T  24498966 ggaaggagctccttgctactagagcccaaa 24498937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 118 - 247
Target Start/End: Complemental strand, 41801060 - 41800931
Alignment:
Q  118 aaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtcctt 217  Q
    ||||||| |||||||||| ||||||||| ||||| |||||||| ||  ||||||||||||| | || |||| ||||||| |||| | | |||||||| ||    
T  41801060 aaagatgaacgactaatccggctcgtgcgtagagacatgcgcattggtcaagcgttgttccccttgagaatcgaacccgatattccccagatacgtcatt 41800961  T
Q  218 ggtaggagctccttgccaccggagcccaaa 247  Q
    |  ||||  ||||| |||| |||| |||||    
T  41800960 gaaaggaattccttaccacgggagtccaaa 41800931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 94 - 183
Target Start/End: Complemental strand, 43399235 - 43399146
Alignment:
Q  94 tttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctg 183  Q
    |||||||| |||||||| |  || |||  |||||||||||||  |||||||| ||||||||||||||||| ||||||||| |||| ||||    
T  43399235 tttcgcaccggtttccgaccaaccaaatgtggacgactaatcctgctcgtgcgtagaggcatgcgcactggccaagcgttattccccctg 43399146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 125 - 217
Target Start/End: Complemental strand, 7336696 - 7336604
Alignment:
Q  125 gacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtcctt 217  Q
    ||||| ||||| ||||||||| ||||||||||||||||||  |||||||||||  | | | ||| ||||||| |||| | |||||||||||||    
T  7336696 gacgattaatccggctcgtgcgtagaggcatgcgcactgataaagcgttgttctccttagaaatcgaacccgatattcctcggatacgtcctt 7336604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 218
Target Start/End: Complemental strand, 18045725 - 18045622
Alignment:
Q  114 cactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgt 213  Q
    |||||||| ||||||| ||||| ||||| ||  |||||||||||| ||  |||||| |||||||| ||||||||| |||||| ||||| | ||||||||     
T  18045725 cactaaaggtggacgattaatc-ggctcatgtgtagaggcatgcgtaccaaccaagggttgttccccctgggaatcgaacccagtattccccggatacgc 18045627  T
Q  214 ccttg 218  Q
    |||||    
T  18045626 ccttg 18045622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 183
Target Start/End: Original strand, 35638062 - 35638122
Alignment:
Q  123 tggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctg 183  Q
    ||||||||||||| | ||||||| |||||| |||| |||||||||| ||||||||||||||    
T  35638062 tggacgactaatctgactcgtgcgtagaggtatgcacactgaccaaacgttgttcctcctg 35638122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 129 - 247
Target Start/End: Complemental strand, 14728155 - 14728036
Alignment:
Q  129 actaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgt-tcctcctgggaatagaacccggtatttcacggatacgtccttggtaggagct 227  Q
    ||||||| ||||| ||| |||||||||||||||||||||||||||||  || ||||  ||| ||| |||||||||| |  | | | |||||| | |||||    
T  14728155 actaatccggctcatgcgtagaggcatgcgcactgaccaagcgttgtccccccctgaaaatcgaatccggtatttcccaaaaatgaccttggaatgagct 14728056  T
Q  228 ccttgccaccggagcccaaa 247  Q
    | ||||||| ||||||||||    
T  14728055 cattgccactggagcccaaa 14728036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 102 - 201
Target Start/End: Original strand, 18294492 - 18294590
Alignment:
Q  102 tggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatt 201  Q
    ||||||||| | ||| |||||||| ||| ||||| || || ||  |||||| ||||||||||||||||||||||||| |||||  || ||||||||||||    
T  18294492 tggtttccgacccaccaaagatgggcgattaatccggttcatgtgtagaggtatgcgcactgaccaagcgttgttcc-cctggatattgaacccggtatt 18294590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 40117490 - 40117432
Alignment:
Q  126 acgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgg 184  Q
    |||| ||||| ||||| ||| ||||||||||||||||| |||||||||||||| |||||    
T  40117490 acgattaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttccccctgg 40117432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 204
Target Start/End: Complemental strand, 21375473 - 21375349
Alignment:
Q  79 ttttttattcttgggtttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcc 178  Q
    |||||| || |||| |||||||||||||||||   ||  |||||||||||||||||| | ||| ||| |||| ||||||||||||  |||  ||||||||    
T  21375473 ttttttttttttggctttcgcactggtttccgatccatcaaagatggacgactaatccgactcatgcgtagaagcatgcgcactggtcaaatgttgttcc 21375374  T
Q  179 tcctgggaatagaacccggtatttca 204  Q
     | ||||| | ||||||| |||||||    
T  21375373 -cttgggagtcgaacccgatatttca 21375349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 194
Target Start/End: Original strand, 22655145 - 22655257
Alignment:
Q  81 ttttattcttgggtttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctc 180  Q
    ||||||| |||| |||||||||||||| || | ||| |||| ||||||||||||| | ||  ||| ||||||||||| |||||| ||| | ||||| | |    
T  22655145 ttttatttttggctttcgcactggttttcgacccac-aaaggtggacgactaatctgacttatgcgtagaggcatgcacactgatcaaacattgtttccc 22655243  T
Q  181 ctgggaatagaacc 194  Q
    |||||||| |||||    
T  22655244 ctgggaatcgaacc 22655257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 201
Target Start/End: Complemental strand, 38369771 - 38369700
Alignment:
Q  129 actaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatt 201  Q
    ||||||| | ||||||| ||||||||||||||||| ||||| |||||||| |||| |||| ||||||| ||||    
T  38369771 actaatccgactcgtgcgtagaggcatgcgcactggccaagtgttgttcc-cctgagaatcgaacccgatatt 38369700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 247
Target Start/End: Complemental strand, 39728441 - 39728341
Alignment:
Q  147 tagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaa 246  Q
    ||||||||||| ||||| ||||| |||||| |  |||  ||| ||||| |||||| | ||| ||||| ||||| | |||||||||||||| |||||||||    
T  39728441 tagaggcatgcacactggccaagtgttgtttcctctgataatcgaacctggtattccccgggtacgttcttggaaagagctccttgccactggagcccaa 39728342  T
Q  247 a 247  Q
    |    
T  39728341 a 39728341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 18327781 - 18327722
Alignment:
Q  190 gaacccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaaaaa 249  Q
    |||||| |||||||  | |||||||||||| |||||||||||||||| |||| |||||||    
T  18327781 gaacccagtatttcctgaatacgtccttggaaggagctccttgccactggagtccaaaaa 18327722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 183
Target Start/End: Complemental strand, 21487721 - 21487635
Alignment:
Q  94 tttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctg 183  Q
    |||||||| ||||| || | || ||||| ||| ||||||||| ||||||||   |||||||||||||||  |||| ||||||||||||||    
T  21487721 tttcgcaccggttttcgacccattaaaggtgggcgactaatccggctcgtg---agaggcatgcgcactagccaaacgttgttcctcctg 21487635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 246
Target Start/End: Original strand, 35561851 - 35561970
Alignment:
Q  127 cgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggagc 226  Q
    ||||||||| ||||| ||  |||||||||||||||||  || | ||||||||  |||| | | |||| || |||| | |||||||||| |||| ||||||    
T  35561851 cgactaatctggctcatgtgtagaggcatgcgcactggtcaggtgttgttccctctggaagtcgaactcgatattccccggatacgtcattggaaggagc 35561950  T
Q  227 tccttgccaccggagcccaa 246  Q
    || ||||||| |||| ||||    
T  35561951 tctttgccactggagtccaa 35561970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 122 - 247
Target Start/End: Complemental strand, 1826937 - 1826811
Alignment:
Q  122 atggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttg-ttcctcctgggaatagaacccggtatttcacggatacgtccttggt 220  Q
    |||||||||||||| |  ||||||  ||||||||| ||| || |||||||||| ||||||||| |||| ||||| | |||| | ||  |||||| ||||     
T  1826937 atggacgactaatctgattcgtgctcagaggcatgtgcagtggccaagcgttgtttcctcctgagaatcgaacctgatattccccgagtacgtctttgga 1826838  T
Q  221 aggagctccttgccaccggagcccaaa 247  Q
    |||||||| |||| || | ||||||||    
T  1826837 aggagctcattgctactgaagcccaaa 1826811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 183
Target Start/End: Complemental strand, 25467473 - 25467428
Alignment:
Q  138 gctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctg 183  Q
    |||||||| |||||||||||| |||| |||| ||||||||||||||    
T  25467473 gctcgtgcgtagaggcatgcgtactggccaatcgttgttcctcctg 25467428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 88; Significance: 7e-42; HSPs: 71)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 79 - 246
Target Start/End: Complemental strand, 7747395 - 7747228
Alignment:
Q  79 ttttttattcttgggtttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcc 178  Q
    |||||| || |||| |||||||| |||||||| | |||||||| || |||||||||| ||||| ||| ||||||||||| ||||| |||| |||||||||    
T  7747395 ttttttttttttggctttcgcaccggtttccgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcacactggccaaacgttgttcc 7747296  T
Q  179 tcctgggaatagaacccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaa 246  Q
    |||| ||||| |||||||||||| | ||||||||||||||| |||||||||||||||| |||||||||    
T  7747295 tcctaggaatcgaacccggtattccccggatacgtccttggaaggagctccttgccactggagcccaa 7747228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 79 - 236
Target Start/End: Complemental strand, 41220756 - 41220599
Alignment:
Q  79 ttttttattcttgggtttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcc 178  Q
    |||||| || |||| |||||||| |||||||| | |||||||| || |||||||||  ||||| ||| ||||||||||||||||| ||||||||||||||    
T  41220756 ttttttttttttggctttcgcaccggtttccgacccactaaaggtgaacgactaattcggctcatgcgtagaggcatgcgcactggccaagcgttgttcc 41220657  T
Q  179 tcctgggaatagaacccggtatttcacggatacgtccttggtaggagctccttgccac 236  Q
    |||||||||| |||||||||||| | ||| ||||||||||| ||||||||||||||||    
T  41220656 tcctgggaatcgaacccggtattccccgggtacgtccttggaaggagctccttgccac 41220599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 79 - 231
Target Start/End: Complemental strand, 10823181 - 10823029
Alignment:
Q  79 ttttttattcttgggtttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcc 178  Q
    |||||| || |||| |||||||| |||||||| | ||| |||| ||| ||||||||| ||||||||| ||||||||||||||||| ||||||||||||||    
T  10823181 ttttttttttttggctttcgcaccggtttccgacccacaaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttcc 10823082  T
Q  179 tcctgggaatagaacccggtatttcacggatacgtccttggtaggagctcctt 231  Q
    ||||||||||  ||||||||||| | ||| ||||||||||| |||||||||||    
T  10823081 tcctgggaatcaaacccggtattccccgggtacgtccttggaaggagctcctt 10823029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 118 - 246
Target Start/End: Original strand, 42770675 - 42770803
Alignment:
Q  118 aaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtcctt 217  Q
    |||| ||||||| ||||| |||||||||  |||||||||||||||| |||||||||||||| |||| |||| |||||||||||||| |||||||||||||    
T  42770675 aaaggtggacgattaatccggctcgtgcgaagaggcatgcgcactggccaagcgttgttccccctgagaattgaacccggtatttctcggatacgtcctt 42770774  T
Q  218 ggtaggagctccttgccaccggagcccaa 246  Q
    || |||||||| ||||||| |||||||||    
T  42770775 ggaaggagctctttgccactggagcccaa 42770803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 94 - 241
Target Start/End: Original strand, 25540404 - 25540551
Alignment:
Q  94 tttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaac 193  Q
    |||||||| |||||||| | ||| |||| ||||||||||||| ||||||||| ||||||||||||||||| |||||||||||||| ||| ||||| ||||    
T  25540404 tttcgcaccggtttccgacccaccaaaggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttccccctaggaatcgaac 25540503  T
Q  194 ccggtatttcacggatacgtccttggtaggagctccttgccaccggag 241  Q
    || ||||| | | ||||||||||||| | |||||||||||||| ||||    
T  25540504 ccagtattccccagatacgtccttggaatgagctccttgccactggag 25540551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 89 - 246
Target Start/End: Complemental strand, 8410242 - 8410085
Alignment:
Q  89 ttgggtttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaat 188  Q
    |||| |||||||| |||||||| | | | |||  ||| ||||||||| ||||||||| ||||||||||||||||| ||||| |||||||| |||||||||    
T  8410242 ttggctttcgcaccggtttccgaccccccaaaagtgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaagtgttgttccccctgggaat 8410143  T
Q  189 agaacccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaa 246  Q
     ||||||| ||||   ||| ||||||||||| |||||||||||||||| |||||||||    
T  8410142 cgaacccgatattctccgggtacgtccttggaaggagctccttgccactggagcccaa 8410085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 79 - 247
Target Start/End: Original strand, 2528326 - 2528494
Alignment:
Q  79 ttttttattcttgggtttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcc 178  Q
    |||||| || |||| ||||||||  ||||||| | |||||||||||  ||||||||| ||||  ||  ||||||||||| ||||||||||||||||||||    
T  2528326 ttttttttttttggctttcgcaccagtttccgactcactaaagatgagcgactaatccggcttatgtgtagaggcatgcacactgaccaagcgttgttcc 2528425  T
Q  179 tcctgggaatagaacccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaaa 247  Q
     ||||||||| ||||||||| || | ||  ||||||||||| |||||||| ||||||| ||||||||||    
T  2528426 ccctgggaatcgaacccggtgttcctcgagtacgtccttggaaggagctcattgccactggagcccaaa 2528494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 94 - 246
Target Start/End: Original strand, 3643887 - 3644039
Alignment:
Q  94 tttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaac 193  Q
    |||||||  |||||||||| ||| |||| |||||||||||||  |||| ||| ||||||||||||||||| |||||||||||||||| | | |||  |||    
T  3643887 tttcgcaacggtttccggcccaccaaaggtggacgactaatccagctcatgcgtagaggcatgcgcactggccaagcgttgttcctcgtagaaatcaaac 3643986  T
Q  194 ccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaa 246  Q
    |||||||| | ||||||||||||||| | ||||||||| |||| |||||||||    
T  3643987 ccggtattccccggatacgtccttggaatgagctcctttccactggagcccaa 3644039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 94 - 246
Target Start/End: Original strand, 18902530 - 18902682
Alignment:
Q  94 tttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaac 193  Q
    |||||||| |||||||| | ||| |||| ||| ||||||||| ||||||||| ||||| || ||||||||  ||||||||||||| | ||||||| ||||    
T  18902530 tttcgcaccggtttccgacccaccaaaggtgggcgactaatctggctcgtgcgtagagacacgcgcactggtcaagcgttgttccccgtgggaatcgaac 18902629  T
Q  194 ccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaa 246  Q
    |||||||| | ||  ||||||||||| |||||||||||||||| |||||||||    
T  18902630 ccggtattccccgagtacgtccttggaaggagctccttgccactggagcccaa 18902682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 79 - 247
Target Start/End: Complemental strand, 38005523 - 38005355
Alignment:
Q  79 ttttttattcttgggtttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcc 178  Q
    |||||| || |||| ||||||||  |||||||   ||| |||| ||| ||||||||| ||||| ||  ||||||||||||||||| ||||||||||||||    
T  38005523 ttttttttttttggctttcgcaccagtttccgatccaccaaaggtgggcgactaatccggctcatgtgtagaggcatgcgcactggccaagcgttgttcc 38005424  T
Q  179 tcctgggaatagaacccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaaa 247  Q
     | ||||||| |||||| ||||| | ||| ||||||||||| |||||||||||||||| ||||||||||    
T  38005423 ccttgggaatcgaacccagtattccccgggtacgtccttggaaggagctccttgccactggagcccaaa 38005355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 94 - 246
Target Start/End: Original strand, 41031906 - 41032057
Alignment:
Q  94 tttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaac 193  Q
    ||||||||||||||||| | ||| |||| |||  |||||||| ||||||||| ||||||||||| ||||| ||||| |||||||| ||||||||| ||||    
T  41031906 tttcgcactggtttccgacccaccaaaggtgggtgactaatccggctcgtgcgtagaggcatgcacactggccaagtgttgttccccctgggaatcgaac 41032005  T
Q  194 ccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaa 246  Q
    |||||  ||| | | ||||||||||| |||||||||||||||| |||||||||    
T  41032006 ccggt-gttccctggtacgtccttggaaggagctccttgccactggagcccaa 41032057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 128 - 247
Target Start/End: Complemental strand, 21286516 - 21286397
Alignment:
Q  128 gactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggagct 227  Q
    ||||||||  |||||||| |||||||||||||||||  ||||||||||| | ||||||||| |||||||||||| | ||||||||||||||| |||||||    
T  21286516 gactaatccagctcgtgcgtagaggcatgcgcactggtcaagcgttgtttcgcctgggaatcgaacccggtattccccggatacgtccttggaaggagct 21286417  T
Q  228 ccttgccaccggagcccaaa 247  Q
    ||||||||| ||||| ||||    
T  21286416 ccttgccactggagctcaaa 21286397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 94 - 247
Target Start/End: Complemental strand, 12864330 - 12864177
Alignment:
Q  94 tttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaac 193  Q
    |||||||| |||||||| | ||| || | ||||||||||||| ||||| |||  |||||||||||||||||||||| |||||||| ||||| ||| |||     
T  12864330 tttcgcaccggtttccgacccaccaatggtggacgactaatctggctcatgcgcagaggcatgcgcactgaccaagtgttgttccccctggaaatcgaat 12864231  T
Q  194 ccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaaa 247  Q
    |||||||| | || ||||||| |||| |||||||||||| ||| ||||||||||    
T  12864230 ccggtattccccgaatacgtcattggaaggagctccttgtcactggagcccaaa 12864177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 126 - 247
Target Start/End: Complemental strand, 34356280 - 34356159
Alignment:
Q  126 acgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggag 225  Q
    |||| ||||| ||||| ||||||||||||||||||||||||||| |||||||| ||||| ||| |||||||||||| | | ||||||||||||| |  ||    
T  34356280 acgattaatccggctcatgcatagaggcatgcgcactgaccaagtgttgttccccctggaaatcgaacccggtattccccagatacgtccttggaaatag 34356181  T
Q  226 ctccttgccaccggagcccaaa 247  Q
    ||||||||||| ||||||||||    
T  34356180 ctccttgccactggagcccaaa 34356159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 81 - 246
Target Start/End: Complemental strand, 44945712 - 44945548
Alignment:
Q  81 ttttattcttgggtttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctc 180  Q
    |||| ||||||| |||||||| ||||||||   |||||||| ||| ||||||||| ||||||||| ||||||||||||||||  |||||||||||||||     
T  44945712 tttttttcttggctttcgcaccggtttccgatccactaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactatccaagcgttgttcct- 44945614  T
Q  181 ctgggaatagaacccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaa 246  Q
    ||||||||  ||||| |||||   ||  ||||||||||| ||||||||||||||||  ||||||||    
T  44945613 ctgggaatcaaacccagtattctccgagtacgtccttggaaggagctccttgccacttgagcccaa 44945548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 94 - 246
Target Start/End: Original strand, 10026616 - 10026768
Alignment:
Q  94 tttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaac 193  Q
    |||| |||| ||||||| | ||| |||| ||| ||||||||| ||||| ||| ||||||||||||||||| |||| ||||||||| |||| |||| ||||    
T  10026616 tttcacactagtttccgacccaccaaaggtggtcgactaatccggctcatgcgtagaggcatgcgcactggccaaacgttgttccccctgagaatcgaac 10026715  T
Q  194 ccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaa 246  Q
    |||||||||  ||  ||||||||||| |||||||||||||||  |||||||||    
T  10026716 ccggtattttccgagtacgtccttggaaggagctccttgccattggagcccaa 10026768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 127 - 246
Target Start/End: Complemental strand, 2550941 - 2550822
Alignment:
Q  127 cgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggagc 226  Q
    ||||||||| ||||| ||| ||||| ||||||||||| | ||| |||||||||||||||||| ||||||| |||| | ||||||||||||||  ||||||    
T  2550941 cgactaatccggctcatgcgtagagacatgcgcactggctaagtgttgttcctcctgggaatcgaacccgatattccccggatacgtccttgtaaggagc 2550842  T
Q  227 tccttgccaccggagcccaa 246  Q
    |||||||||| |||||||||    
T  2550841 tccttgccactggagcccaa 2550822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 89 - 246
Target Start/End: Original strand, 20612529 - 20612688
Alignment:
Q  89 ttgggtttcgcactggtttccggcacactaaagatggacgactaatca-ggctcgtgcatagaggcatgcgcactgaccaagcgttgttcc-tcctggga 186  Q
    |||| |||||||| |||||||| | ||| || | |||||||||||||  ||||| ||||||||||||||||||||| ||||| |||||||| ||||| ||    
T  20612529 ttggttttcgcaccggtttccgacccaccaatggtggacgactaatcccggctcatgcatagaggcatgcgcactggccaagtgttgttccctcctgaga 20612628  T
Q  187 atagaacccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaa 246  Q
    || |||||||||||| | || ||||  |||||| |||||||||||||||| |||||||||    
T  20612629 atcgaacccggtattccccgaatacaaccttggaaggagctccttgccactggagcccaa 20612688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 100 - 246
Target Start/End: Complemental strand, 331601 - 331455
Alignment:
Q  100 actggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggta 199  Q
    ||||||||||  | ||| |||| ||| ||||||||| ||||| ||| |||| |||||||||||| ||||| |||||||| ||||||||| ||||||||||    
T  331601 actggtttccaacccaccaaaggtgggcgactaatccggctcatgcgtagaagcatgcgcactggccaagtgttgttccccctgggaatcgaacccggta 331502  T
Q  200 tttcacggatacgtccttggtaggagctccttgccaccggagcccaa 246  Q
    || | ||| ||||||||||| | |||||| ||||||| |||||||||    
T  331501 ttccccgggtacgtccttggaaagagctcattgccactggagcccaa 331455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 89 - 242
Target Start/End: Complemental strand, 22593244 - 22593093
Alignment:
Q  89 ttgggtttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaat 188  Q
    |||| |||||||| |||| ||| | ||| |||| ||||||||||||| ||||| ||| ||||||||||||||||| |||| ||||||||| |||||||||    
T  22593244 ttggctttcgcaccggtt-ccgacccaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaa-cgttgttccccctgggaat 22593147  T
Q  189 agaacccggtatttcacggatacgtccttggtaggagctccttgccaccggagc 242  Q
     |||| | ||||| | ||| ||||||||||| |||||||||||||||| |||||    
T  22593146 cgaactcagtattccccgggtacgtccttggaaggagctccttgccactggagc 22593093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 118 - 247
Target Start/End: Complemental strand, 37560255 - 37560126
Alignment:
Q  118 aaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtcctt 217  Q
    |||| ||||||| ||||| ||||||||| |||||||||||||||||||||| ||||||||| | || |||| ||||| |||||| | ||| |||||||||    
T  37560255 aaaggtggacgattaatccggctcgtgcgtagaggcatgcgcactgaccaaacgttgttccccttgagaatcgaacctggtattcctcgggtacgtcctt 37560156  T
Q  218 ggtaggagctccttgccaccggagcccaaa 247  Q
    || ||||||| ||| |||| ||||||||||    
T  37560155 ggaaggagcttcttaccactggagcccaaa 37560126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 118 - 247
Target Start/End: Complemental strand, 38962845 - 38962716
Alignment:
Q  118 aaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtcctt 217  Q
    |||| ||||||||||||| || || ||| ||||||||||||||||| |||||||||||||||||||  ||| |||||||||||| | |||||||||||||    
T  38962845 aaaggtggacgactaatccggttcatgcgtagaggcatgcgcactggccaagcgttgttcctcctgaaaatcgaacccggtattccccggatacgtcctt 38962746  T
Q  218 ggtaggagctccttgccaccggagcccaaa 247  Q
    |  | ||||||||| |||| |||| |||||    
T  38962745 gaaatgagctccttaccactggagtccaaa 38962716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 94 - 231
Target Start/End: Original strand, 28616379 - 28616516
Alignment:
Q  94 tttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaac 193  Q
    |||||||| |||||| | | |||||||||||| ||||||||| ||||||||| ||||||||||||||||| ||||| ||| |||| ||||  ||| ||||    
T  28616379 tttcgcaccggtttctgacccactaaagatgggcgactaatctggctcgtgcgtagaggcatgcgcactgcccaagtgttattccccctgaaaatcgaac 28616478  T
Q  194 ccggtatttcacggatacgtccttggtaggagctcctt 231  Q
    ||| |||| | |||||| |||||||| ||||| |||||    
T  28616479 ccgatattccgcggatatgtccttggaaggagttcctt 28616516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 118 - 247
Target Start/End: Original strand, 45263691 - 45263820
Alignment:
Q  118 aaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtcctt 217  Q
    |||||||  ||| ||||| ||||||||| ||||||||||||||||| ||||||||||||||  |||||||| |||||||||||| | ||||||  |  ||    
T  45263691 aaagatgagcgattaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttccctctgggaatcgaacccggtattccccggataaattttt 45263790  T
Q  218 ggtaggagctccttgccaccggagcccaaa 247  Q
    |  |||||||||||||||| ||||||||||    
T  45263791 gaaaggagctccttgccactggagcccaaa 45263820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 123 - 247
Target Start/End: Original strand, 6358180 - 6358304
Alignment:
Q  123 tggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtag 222  Q
    ||||||||||||| ||||| ||| ||||||||||||||||| ||||| |||||||| ||||| ||| ||| | |||||| | ||||||||||||| | |     
T  6358180 tggacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctggaaatcgaatctggtattccccggatacgtcctttgaat 6358279  T
Q  223 gagctccttgccaccggagcccaaa 247  Q
    ||||| |||||||| ||||||||||    
T  6358280 gagcttcttgccactggagcccaaa 6358304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 118 - 246
Target Start/End: Complemental strand, 7787138 - 7787010
Alignment:
Q  118 aaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtcctt 217  Q
    |||||||| ||||||||| ||||||||| |||||||||||| |||| |||||  ||||||| ||||| ||| |||||||||||| | ||| ||||||||     
T  7787138 aaagatgggcgactaatccggctcgtgcgtagaggcatgcgtactggccaagtattgttccccctggaaatcgaacccggtattccccgggtacgtccta 7787039  T
Q  218 ggtaggagctccttgccaccggagcccaa 246  Q
    |  ||||| |||||||||| |||||||||    
T  7787038 gaaaggagttccttgccactggagcccaa 7787010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 127 - 247
Target Start/End: Original strand, 21180347 - 21180467
Alignment:
Q  127 cgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggagc 226  Q
    ||||||||| ||||||||| |||||||||| |||||| ||||| |||||||  | ||||||| ||| ||||||||   ||| ||||||||||| ||||||    
T  21180347 cgactaatccggctcgtgcgtagaggcatgtgcactggccaagtgttgttctccatgggaatcgaatccggtattcttcgggtacgtccttggaaggagc 21180446  T
Q  227 tccttgccaccggagcccaaa 247  Q
    |||||||||| ||||||||||    
T  21180447 tccttgccactggagcccaaa 21180467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 94 - 246
Target Start/End: Complemental strand, 33005857 - 33005706
Alignment:
Q  94 tttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaac 193  Q
    |||||||  |||||||| | |||||||| ||  ||| ||||| | ||| ||| ||||||||||||||||| ||||| |||||||| |||||||| |||||    
T  33005857 tttcgcatcggtttccgacccactaaaggtgagcgattaatctgcctcatgcgtagaggcatgcgcactggccaagtgttgttcc-cctgggaacagaac 33005759  T
Q  194 ccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaa 246  Q
    |||||||| ||||| |||||||| |  | |||||||||||||| |||||||||    
T  33005758 ccggtattccacgggtacgtcctagaaatgagctccttgccactggagcccaa 33005706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 94 - 246
Target Start/End: Complemental strand, 44139590 - 44139438
Alignment:
Q  94 tttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaac 193  Q
    |||||||| |||||||| | ||| |  | ||| ||||||||| ||||||||| |||||||| |||||||| |||||||||||||| ||||||||| ||||    
T  44139590 tttcgcaccggtttccgacccaccattggtgggcgactaatccggctcgtgcgtagaggcacgcgcactggccaagcgttgttccccctgggaatcgaac 44139491  T
Q  194 ccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaa 246  Q
    |||||||| | | ||| | ||||||| ||||| ||||  |||| |||||||||    
T  44139490 ccggtattccccagatgcatccttggaaggagttcctcaccactggagcccaa 44139438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 117 - 246
Target Start/End: Complemental strand, 10106671 - 10106542
Alignment:
Q  117 taaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtcct 216  Q
    ||||| ||||||||||||| | ||  |||||||| |||||||| || | |||||||||||||| ||| |||| ||| |||||||||| |||||||||| |    
T  10106671 taaaggtggacgactaatccgacttatgcatagaagcatgcgcgctaatcaagcgttgttccttctgagaatcgaatccggtatttctcggatacgtctt 10106572  T
Q  217 tggtaggagctccttgccaccggagcccaa 246  Q
    ||  ||| ||||||| ||||||||||||||    
T  10106571 tgaaaggtgctccttaccaccggagcccaa 10106542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 118 - 247
Target Start/End: Original strand, 39806909 - 39807038
Alignment:
Q  118 aaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtcctt 217  Q
    |||| |||| |||||||| | ||||||  ||||||||||||||||| |||| ||||||| ||| ||||||| |||||||||||| | ||| |||||||||    
T  39806909 aaaggtggatgactaatccgactcgtgtgtagaggcatgcgcactggccaaacgttgtttctcttgggaatcgaacccggtattccccgggtacgtcctt 39807008  T
Q  218 ggtaggagctccttgccaccggagcccaaa 247  Q
    |  ||||||  |||||||| ||||||||||    
T  39807009 gtaaggagcatcttgccactggagcccaaa 39807038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 94 - 234
Target Start/End: Original strand, 9360748 - 9360888
Alignment:
Q  94 tttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaac 193  Q
    |||||||| |||||||||| |||||||| ||| ||||||||  ||||||||| ||||||||||||||||| |||| ||||||| |  || | ||| ||||    
T  9360748 tttcgcaccggtttccggcccactaaaggtgggcgactaattcggctcgtgcgtagaggcatgcgcactggccaaacgttgtttcctctagtaatcgaac 9360847  T
Q  194 ccggtatttcacggatacgtccttggtaggagctccttgcc 234  Q
    | |||||| | ||| ||||||||||| | ||| ||||||||    
T  9360848 ctggtattccccgggtacgtccttggaatgagatccttgcc 9360888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 94 - 246
Target Start/End: Complemental strand, 35946844 - 35946693
Alignment:
Q  94 tttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaac 193  Q
    ||||||||  ||||||| | ||| || | ||||||||||||| ||||||||| ||||||||||| || || |||||||||||||| ||| ||||| ||||    
T  35946844 tttcgcaccagtttccgacccaccaatggtggacgactaatccggctcgtgcgtagaggcatgcacaatggccaagcgttgttcc-cctaggaatcgaac 35946746  T
Q  194 ccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaa 246  Q
     ||||||| | ||||||||||||| | | ||||||||| |||| | |||||||    
T  35946745 tcggtattccccggatacgtccttagaatgagctccttaccacggaagcccaa 35946693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 127 - 246
Target Start/End: Complemental strand, 15079556 - 15079437
Alignment:
Q  127 cgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggagc 226  Q
    ||||||||  ||||||||| ||||| ||||| |||||  ||||||||||||| ||||| ||| |||||| ||||| | ||| ||||||||||| ||| |     
T  15079556 cgactaatttggctcgtgcgtagagtcatgcacactggtcaagcgttgttccccctggaaatcgaaccctgtattccccgggtacgtccttggaaggtgt 15079457  T
Q  227 tccttgccaccggagcccaa 246  Q
    ||||||||||||||||||||    
T  15079456 tccttgccaccggagcccaa 15079437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 127 - 245
Target Start/End: Complemental strand, 41187922 - 41187804
Alignment:
Q  127 cgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggagc 226  Q
    ||||||||| | ||| ||| |||||||||||||||||  |||||||||||  ||||  |||| |||  ||||||| | ||||||||||||||| ||||||    
T  41187922 cgactaatccgtctcatgcgtagaggcatgcgcactggtcaagcgttgtttttcctaagaattgaattcggtattcctcggatacgtccttggaaggagc 41187823  T
Q  227 tccttgccaccggagccca 245  Q
    |||||||||||| ||||||    
T  41187822 tccttgccaccgaagccca 41187804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 89 - 246
Target Start/End: Original strand, 10046472 - 10046628
Alignment:
Q  89 ttgggtttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaat 188  Q
    |||| |||| |||| ||||||| | ||| |||| ||| ||||||||| ||||| ||| |||||||||||||||||  ||| ||||||| | | || ||||    
T  10046472 ttggttttcacactagtttccgacccaccaaaggtggtcgactaatccggctcatgcgtagaggcatgcgcactg-tcaaacgttgtttcccttgagaat 10046570  T
Q  189 agaacccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaa 246  Q
     ||||||||||||   ||||||||| ||||| |||||||||||||||  |||||||||    
T  10046571 cgaacccggtattctccggatacgttcttggaaggagctccttgccattggagcccaa 10046628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 128 - 241
Target Start/End: Original strand, 13026445 - 13026558
Alignment:
Q  128 gactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggagct 227  Q
    |||||||| ||||| ||| ||||||||||||||||| |||| | ||||||||||||  ||| ||||||| |||| |  |||||||||||||| ||||| |    
T  13026445 gactaatccggctcatgcgtagaggcatgcgcactggccaatcattgttcctcctgataatcgaacccgatattccctggatacgtccttggaaggagtt 13026544  T
Q  228 ccttgccaccggag 241  Q
    ||||||||| ||||    
T  13026545 ccttgccactggag 13026558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 118 - 247
Target Start/End: Complemental strand, 24179650 - 24179524
Alignment:
Q  118 aaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtcctt 217  Q
    |||||||||||||||||| ||||| ||| |||||||||| |||||| |||| ||||||||| |||| |||| ||| |||||| |||| || |||||||||    
T  24179650 aaagatggacgactaatccggctcatgcgtagaggcatgtgcactggccaaacgttgttcc-cctgagaatcgaa-ccggta-ttcatgggtacgtcctt 24179554  T
Q  218 ggtaggagctccttgccaccggagcccaaa 247  Q
    || |||||||| |||||||  |||||||||    
T  24179553 ggaaggagctctttgccactagagcccaaa 24179524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 79 - 235
Target Start/End: Original strand, 3811676 - 3811832
Alignment:
Q  79 ttttttattcttgggtttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcc 178  Q
    |||||| || |||| |||||||  |||||| | | ||| |||| ||| ||| ||||| ||||| ||| |||||||||||||| |||||||| ||||||||    
T  3811676 ttttttttttttggctttcgcatcggtttctgacccaccaaaggtgggcgagtaatccggctcatgcgtagaggcatgcgcattgaccaagtgttgttcc 3811775  T
Q  179 tcctgggaatagaacccggtatttcacggatacgtccttggtaggagctccttgcca 235  Q
      |||||||| ||||||| |||| | ||  ||||||||||| ||||| |||||||||    
T  3811776 ctctgggaatcgaacccgatattcctcgagtacgtccttggaaggagttccttgcca 3811832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 147 - 247
Target Start/End: Original strand, 19976860 - 19976960
Alignment:
Q  147 tagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaa 246  Q
    ||||| |||||||||||||||| |||| |||| ||||  ||| |||||||||||| | ||||||||||||||| | ||||| |||||||| |||||||||    
T  19976860 tagagacatgcgcactgaccaaacgttattccccctgaaaatcgaacccggtattccccggatacgtccttggaaagagctacttgccactggagcccaa 19976959  T
Q  247 a 247  Q
    |    
T  19976960 a 19976960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 79 - 201
Target Start/End: Complemental strand, 12455431 - 12455309
Alignment:
Q  79 ttttttattcttgggtttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcc 178  Q
    |||||| || |||| |||||||| |||||||| | ||| || | ||  ||||||||| ||||||||| ||||||||||||||||| | |||||||||| |    
T  12455431 ttttttttttttggctttcgcaccggtttccgacccaccaatggtgagcgactaatccggctcgtgcgtagaggcatgcgcactggctaagcgttgtttc 12455332  T
Q  179 tcctgggaatagaacccggtatt 201  Q
     ||||| ||| ||||||||||||    
T  12455331 ccctggaaatcgaacccggtatt 12455309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 118 - 248
Target Start/End: Complemental strand, 25549810 - 25549680
Alignment:
Q  118 aaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtcctt 217  Q
    |||||||||||||||||| ||||||||| |||||||||| |||||  ||||  ||||||   |||  |||| |||||| ||||| | |  |||||| |||    
T  25549810 aaagatggacgactaatccggctcgtgcgtagaggcatgtgcactagccaaatgttgttttccctaagaatcgaacccagtattccccaaatacgtactt 25549711  T
Q  218 ggtaggagctccttgccaccggagcccaaaa 248  Q
    || |||||||||||||||| |||||||||||    
T  25549710 ggaaggagctccttgccactggagcccaaaa 25549680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 94 - 235
Target Start/End: Complemental strand, 11069984 - 11069843
Alignment:
Q  94 tttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaac 193  Q
    |||||||  |||||||| | ||| || | ||||||||||||   |||||||| |||||| |||||||||| |||| ||||||||| ||| ||||| ||||    
T  11069984 tttcgcatcggtttccgacccaccaacggtggacgactaattcagctcgtgcgtagaggtatgcgcactggccaaacgttgttccccctcggaatcgaac 11069885  T
Q  194 ccggtatttcacggatacgtccttggtaggagctccttgcca 235  Q
    | |||||| | ||| ||||||||||| | |||||||| ||||    
T  11069884 ctggtattccccgggtacgtccttggaatgagctcctagcca 11069843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 94 - 247
Target Start/End: Original strand, 14169609 - 14169762
Alignment:
Q  94 tttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaac 193  Q
    |||||||| |||||||| | ||| || | | ||||||||||| ||||| ||| ||||| |||||||||||  |||| |||||||| || | |||| ||||    
T  14169609 tttcgcaccggtttccgacccaccaatggtagacgactaatccggctcatgcgtagagacatgcgcactggtcaagtgttgttcccccggagaatcgaac 14169708  T
Q  194 ccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaaa 247  Q
    ||| |||| | || |||||||||||| | || ||||||| ||| ||||||||||    
T  14169709 ccgatattccccgaatacgtccttggaaagatctccttgtcactggagcccaaa 14169762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 127 - 236
Target Start/End: Complemental strand, 16035010 - 16034901
Alignment:
Q  127 cgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggagc 226  Q
    ||||||||| ||||||| | || |||||||| |||||  ||||||||||||| ||||  ||| |||||||||||| | ||||||||||||||| |||||     
T  16035010 cgactaatccggctcgtacgtataggcatgcacactggtcaagcgttgttccgcctgaaaatcgaacccggtattcctcggatacgtccttggaaggagt 16034911  T
Q  227 tccttgccac 236  Q
    ||||| ||||    
T  16034910 tccttaccac 16034901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 118 - 247
Target Start/End: Complemental strand, 29422297 - 29422168
Alignment:
Q  118 aaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtcctt 217  Q
    |||| ||||||||||||| ||||||||| || ||| |||| || || ||||| ||||||||  |||| ||| |||||| ||||| | ||| |||||||||    
T  29422297 aaaggtggacgactaatccggctcgtgcgtaaaggtatgctcattggccaagtgttgttccctctggaaatcgaacccagtattccccgggtacgtcctt 29422198  T
Q  218 ggtaggagctccttgccaccggagcccaaa 247  Q
    |  ||||||||||||| || ||||||||||    
T  29422197 gaaaggagctccttgctactggagcccaaa 29422168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 103 - 236
Target Start/End: Original strand, 39201517 - 39201650
Alignment:
Q  103 ggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtattt 202  Q
    |||||||| | ||| |||| || |||||||||| ||||| ||| ||||||||||| ||||| |||| | ||||||| |||| |||| |||  |||||||     
T  39201517 ggtttccgacccaccaaaggtgaacgactaatccggctcatgcgtagaggcatgcacactggccaaacattgttccccctgagaatcgaattcggtattc 39201616  T
Q  203 cacggatacgtccttggtaggagctccttgccac 236  Q
    | ||  ||||||||||| ||||||||||||||||    
T  39201617 ctcgagtacgtccttggaaggagctccttgccac 39201650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 167 - 247
Target Start/End: Original strand, 23500755 - 23500834
Alignment:
Q  167 aagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaaa 247  Q
    |||| ||||||||||||||||| ||||||| |||| | || ||||||| |||| |||||||||||||||||||||||||||    
T  23500755 aagctttgttcctcctgggaatcgaacccgatattccccg-atacgtctttggaaggagctccttgccaccggagcccaaa 23500834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 94 - 193
Target Start/End: Complemental strand, 16325701 - 16325602
Alignment:
Q  94 tttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaac 193  Q
    |||||||| |||||||| | ||| || | ||||||||||||| ||||| ||| ||||||||||| ||||| ||||| |||||||| ||||||||| ||||    
T  16325701 tttcgcaccggtttccgacccaccaatggtggacgactaatctggctcatgcgtagaggcatgcacactggccaagtgttgttccccctgggaatcgaac 16325602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 151 - 246
Target Start/End: Original strand, 37804948 - 37805043
Alignment:
Q  151 ggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaa 246  Q
    ||||||||||||  ||||||||| |||| |||| |||| ||| |||||||||| ||| ||||||||||| ||||| |||||||||| | |||||||    
T  37804948 ggcatgcgcactagccaagcgttattccccctgtgaatcgaatccggtatttctcgggtacgtccttgggaggagttccttgccactgtagcccaa 37805043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 118 - 231
Target Start/End: Original strand, 15234085 - 15234198
Alignment:
Q  118 aaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtcctt 217  Q
    ||||||| ||||||||||   || |||| |||||||||||||||||  |||| |||||||| |||| |||| |||||  ||||| | ||| |||||||||    
T  15234085 aaagatgaacgactaatctaacttgtgcgtagaggcatgcgcactggtcaagtgttgttccccctgagaatcgaacctagtattccccgggtacgtcctt 15234184  T
Q  218 ggtaggagctcctt 231  Q
    || |||||||||||    
T  15234185 ggaaggagctcctt 15234198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 243
Target Start/End: Complemental strand, 29653700 - 29653584
Alignment:
Q  127 cgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacgga-tacgtccttggtaggag 225  Q
    ||||||||  ||||||||| ||||||||||||||||| ||||||||||||   ||||| ||| ||| |||||||||| |||| ||||||||||| || ||    
T  29653700 cgactaattcggctcgtgcgtagaggcatgcgcactgcccaagcgttgttttccctggaaatcgaatccggtatttc-cggagtacgtccttggaagaag 29653602  T
Q  226 ctccttgccaccggagcc 243  Q
     || ||||||| ||||||    
T  29653601 ttcattgccactggagcc 29653584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 118 - 247
Target Start/End: Complemental strand, 34722762 - 34722634
Alignment:
Q  118 aaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtcctt 217  Q
    |||| ||| ||||||||| ||||||||| ||||| |||| ||||||||||||||||||||  |||| |||| ||||||  ||||     | |||||||||    
T  34722762 aaaggtgggcgactaatccggctcgtgcgtagagacatgtgcactgaccaagcgttgttctccctgagaatcgaaccc-atattcatttggtacgtcctt 34722664  T
Q  218 ggtaggagctccttgccaccggagcccaaa 247  Q
    || |||||||||||| ||| ||||||||||    
T  34722663 ggaaggagctccttgtcactggagcccaaa 34722634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 79 - 199
Target Start/End: Complemental strand, 10669713 - 10669593
Alignment:
Q  79 ttttttattcttgggtttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcc 178  Q
    |||||| || |||| ||| |||| |||||||| | ||| |||| || |||| ||||| | ||||||| ||||| ||||||||||| |||||||||||||     
T  10669713 ttttttttttttggatttagcaccggtttccgacccaccaaaggtgaacgattaatccgactcgtgcgtagagacatgcgcactggccaagcgttgttct 10669614  T
Q  179 tcctgggaatagaacccggta 199  Q
     |||||||||  |||||||||    
T  10669613 ccctgggaatcaaacccggta 10669593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 118 - 178
Target Start/End: Original strand, 16813189 - 16813249
Alignment:
Q  118 aaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcc 178  Q
    |||||||||||||||||| |||||||||||||||||||||| ||||  ||| |||||||||    
T  16813189 aaagatggacgactaatccggctcgtgcatagaggcatgcgtactggtcaaacgttgttcc 16813249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 118 - 178
Target Start/End: Original strand, 16852468 - 16852528
Alignment:
Q  118 aaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcc 178  Q
    |||||||||||||||||| |||||||||||||||||||||| ||||  ||| |||||||||    
T  16852468 aaagatggacgactaatccggctcgtgcatagaggcatgcgtactggtcaaacgttgttcc 16852528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 94 - 233
Target Start/End: Complemental strand, 2785038 - 2784900
Alignment:
Q  94 tttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaac 193  Q
    |||||||| |||||||| | ||  || ||||||||||||||| | ||| ||| ||||||||||||||||||||||   ||||| | ||||  ||| ||||    
T  2785038 tttcgcaccggtttccgactcatcaatgatggacgactaatctgactcatgcgtagaggcatgcgcactgaccaaatcttgtttc-cctgaaaatcgaac 2784940  T
Q  194 ccggtatttcacggatacgtccttggtaggagctccttgc 233  Q
     ||||||| | ||||||||||||||  |||||||| ||||    
T  2784939 tcggtattcctcggatacgtccttgaaaggagctcattgc 2784900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 78 - 176
Target Start/End: Original strand, 28525439 - 28525537
Alignment:
Q  78 gttttttattcttgggtttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgtt 176  Q
    ||||||| || |||| |||| |||  ||||||| | || ||||| |||| |||||||| ||||||||| ||||||||||||||||| ||||| ||||||    
T  28525439 gttttttttttttggctttcacaccagtttccgacccattaaaggtggatgactaatccggctcgtgcgtagaggcatgcgcactggccaagtgttgtt 28525537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 94 - 247
Target Start/End: Complemental strand, 5035394 - 5035241
Alignment:
Q  94 tttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaac 193  Q
    |||||||  |||||||| | || ||||| |||| || ||||| || |||||| ||||| |||||||||||  ||||| |||||  | |||||||| ||||    
T  5035394 tttcgcatgggtttccgacccattaaaggtggatgattaatccggttcgtgcgtagagacatgcgcactggtcaagcattgttttttctgggaatcgaac 5035295  T
Q  194 ccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaaa 247  Q
    ||  |||||  ||||||||| ||| | || |||||| |||||| ||||||||||    
T  5035294 ccaatattttccggatacgttcttagaagcagctccgtgccactggagcccaaa 5035241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 89 - 182
Target Start/End: Original strand, 20116607 - 20116700
Alignment:
Q  89 ttgggtttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcct 182  Q
    |||| |||||||| |||||||| | ||  |||| |||||| |||||| ||||| ||| |||||||||||||| || ||| ||||||||||||||    
T  20116607 ttggctttcgcaccggtttccgacccatcaaaggtggacggctaatccggctcatgcgtagaggcatgcgcattggccatgcgttgttcctcct 20116700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 127 - 188
Target Start/End: Complemental strand, 27726013 - 27725952
Alignment:
Q  127 cgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaat 188  Q
    ||||||||| |||| |||| ||||||||||||||||| |||||| |||||||||||| ||||    
T  27726013 cgactaatccggctagtgcgtagaggcatgcgcactggccaagcattgttcctcctgagaat 27725952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 247
Target Start/End: Original strand, 14853385 - 14853520
Alignment:
Q  114 cactaaagatggacgactaatcaggctc--gtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatac 211  Q
    |||||||||||||||||||||| | |||  | | | |||||||| ||||||| ||||  |||||||| ||||  ||| ||| | |||||| | |||||||    
T  14853385 cactaaagatggacgactaatccgactcatgagtagagaggcatacgcactggccaaaagttgttccccctgaaaatcgaatctggtattccccggatac 14853484  T
Q  212 gtccttggtaggagctccttgccaccggagcccaaa 247  Q
     ||||||  ||||| |||||||||| ||||||||||    
T  14853485 atccttgaaaggagttccttgccactggagcccaaa 14853520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 127 - 247
Target Start/End: Original strand, 18649059 - 18649179
Alignment:
Q  127 cgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggagc 226  Q
    ||||||||| | ||| ||| ||||||||||||||||| ||||   |||||||||||| |||| ||| |||||||| |  | || | ||||||| || |||    
T  18649059 cgactaatccgactcatgcgtagaggcatgcgcactgcccaaatattgttcctcctgagaatcgaatccggtattccctgaatgcatccttggaagcagc 18649158  T
Q  227 tccttgccaccggagcccaaa 247  Q
    | |||||||| ||||||||||    
T  18649159 ttcttgccactggagcccaaa 18649179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 147 - 246
Target Start/End: Complemental strand, 29802863 - 29802765
Alignment:
Q  147 tagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaa 246  Q
    |||||||||| |||||| |||| ||||||| ||| ||||||| ||| ||| |||| | |||||||||| |||| | |||||| |||||||||||| ||||    
T  29802863 tagaggcatgtgcactggccaaacgttgtttctcatgggaattgaatccgatatt-ctcggatacgtctttggaaagagctcattgccaccggagtccaa 29802765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 247
Target Start/End: Original strand, 2149240 - 2149348
Alignment:
Q  140 tcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaac-ccggtatttcacggatacgtccttggtaggagctccttgccaccg 238  Q
    |||||| ||||||||||||||||| |||| |||| |||| || | |||| |||| |||||||| | | ||||| ||||||  || || |||||||||| |    
T  2149240 tcgtgcgtagaggcatgcgcactggccaaacgttattcccccagtgaatcgaactccggtattccccagatacatccttgaaagaagttccttgccactg 2149339  T
Q  239 gagcccaaa 247  Q
    |||||||||    
T  2149340 gagcccaaa 2149348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 80 - 232
Target Start/End: Original strand, 34346273 - 34346425
Alignment:
Q  80 tttttattcttgggtttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcct 179  Q
    ||||| || |||| |||||||| |||||||| | ||| |||| ||  ||| ||||| | ||| ||| ||||||||||| ||||| ||||| ||||||||     
T  34346273 tttttttttttggctttcgcaccggtttccgacccaccaaaggtgagcgattaatctgactcatgcgtagaggcatgcacactggccaagtgttgttccc 34346372  T
Q  180 cctgggaatagaacccggtatttcacggatacgtccttggtaggagctccttg 232  Q
    ||||  |||  ||||| ||||| | | | ||||||||||| | ||||||||||    
T  34346373 cctgataatcaaacccagtattccccaggtacgtccttggaatgagctccttg 34346425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 158 - 236
Target Start/End: Original strand, 31596496 - 31596574
Alignment:
Q  158 gcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggagctccttgccac 236  Q
    |||||| |||| | ||||||| ||||  ||||||||| | ||||  ||||||||||| |||| ||||||||||||||||    
T  31596496 gcactggccaaacattgttccccctgaaaatagaacctgatattctacggatacgtctttggaaggagctccttgccac 31596574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 247
Target Start/End: Complemental strand, 13514039 - 13513958
Alignment:
Q  166 caagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaaa 247  Q
    |||||||||||||  ||| |||| ||  |||||||||  ||||||| ||||||| | ||||||||| ||||||||| |||||    
T  13514039 caagcgttgttccctctgtgaatcgagtccggtattttccggatacatccttggaaagagctcctttccaccggaggccaaa 13513958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 175
Target Start/End: Original strand, 31740785 - 31740842
Alignment:
Q  118 aaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgt 175  Q
    |||| |||||||||| || | ||||||| |||| |||| |||||||||||||||||||    
T  31740785 aaaggtggacgactagtctgactcgtgcctagaagcattcgcactgaccaagcgttgt 31740842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 242
Target Start/End: Original strand, 34738395 - 34738472
Alignment:
Q  165 ccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggagctccttgccaccggagc 242  Q
    |||||||||||||  | ||||||| ||| || ||||| | ||||||||||||||| |||| ||||| ||||| |||||    
T  34738395 ccaagcgttgttctccatgggaatcgaatccagtattcctcggatacgtccttggaaggaactcctcgccactggagc 34738472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 178
Target Start/End: Original strand, 43303319 - 43303376
Alignment:
Q  121 gatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcc 178  Q
    ||||| ||| |||||  ||||||||||||||||||||| ||||  |||||||||||||    
T  43303319 gatgggcgattaatccagctcgtgcatagaggcatgcgtactggtcaagcgttgttcc 43303376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 86; Significance: 1e-40; HSPs: 69)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 94 - 247
Target Start/End: Complemental strand, 5855629 - 5855476
Alignment:
Q  94 tttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaac 193  Q
    |||||||  |||||||| | |||||||| || |||||||||| | ||| ||| ||||||||||||||||| |||||||||||||||||||||||| ||||    
T  5855629 tttcgcatcggtttccgacccactaaaggtgaacgactaatccgcctcatgcgtagaggcatgcgcactggccaagcgttgttcctcctgggaatcgaac 5855530  T
Q  194 ccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaaa 247  Q
    |||||||| | || |||||||||||| |||||||||||||||| ||||||||||    
T  5855529 ccggtattccccgaatacgtccttggaaggagctccttgccactggagcccaaa 5855476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 79 - 247
Target Start/End: Original strand, 41663842 - 41664010
Alignment:
Q  79 ttttttattcttgggtttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcc 178  Q
    |||||| || |||| |||||||| |||||||| | ||| || | |||||||||||||  |||| ||| ||||||||||||||||||||||| ||||||||    
T  41663842 ttttttttttttggctttcgcaccggtttccgacccaccaatggtggacgactaatccagctcatgcgtagaggcatgcgcactgaccaagtgttgttcc 41663941  T
Q  179 tcctgggaatagaacccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaaa 247  Q
     ||||||||| |||||||||||| | ||||||||||||| | |||||||||||||||| ||||||||||    
T  41663942 ccctgggaatcgaacccggtattccccggatacgtccttagaaggagctccttgccactggagcccaaa 41664010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 89 - 246
Target Start/End: Complemental strand, 8764103 - 8763946
Alignment:
Q  89 ttgggtttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaat 188  Q
    |||| |||||||| |||||||| | ||| || | ||||||||||||| ||||||||| ||||||||||||||||| ||||| |||||||| ||||||||     
T  8764103 ttggctttcgcaccggtttccgacccaccaacggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaagtgttgttccccctgggaaa 8764004  T
Q  189 agaacccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaa 246  Q
     ||||||| |||| | ||| ||||||||||| |||||||||||||||| |||||||||    
T  8764003 cgaacccgatattccccgggtacgtccttggaaggagctccttgccacgggagcccaa 8763946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 89 - 246
Target Start/End: Original strand, 43959817 - 43959974
Alignment:
Q  89 ttgggtttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaat 188  Q
    |||| |||||||| ||||||||   |||||||| ||| ||||||||| ||||||||| ||||||||||||||||| |||||||||||||| |||||||||    
T  43959817 ttggctttcgcaccggtttccgatccactaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttccccctgggaat 43959916  T
Q  189 agaacccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaa 246  Q
     ||||||| |||| | ||| |||||| |||| |||||| ||||||||| |||||||||    
T  43959917 tgaacccgatattccccgggtacgtcattggaaggagcaccttgccactggagcccaa 43959974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 94 - 249
Target Start/End: Original strand, 45361883 - 45362038
Alignment:
Q  94 tttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaac 193  Q
    |||||||| |||||||| | |||||||| || |||||||||| ||||  ||| ||| ||||||||||||| ||||||||||||||||||| |||| ||||    
T  45361883 tttcgcaccggtttccgacccactaaaggtgaacgactaatccggcttatgcgtagtggcatgcgcactggccaagcgttgttcctcctgagaatcgaac 45361982  T
Q  194 ccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaaaaa 249  Q
    |||||||| |  || ||||||||||| |||||||||||||||| | ||||||||||    
T  45361983 ccggtattcccagggtacgtccttggaaggagctccttgccactgaagcccaaaaa 45362038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 89 - 247
Target Start/End: Original strand, 17642000 - 17642158
Alignment:
Q  89 ttgggtttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaat 188  Q
    |||| ||||||||  ||||||| | ||| |||| ||||||||||||| ||||||||| ||||||||||||||||| ||||| |||||||| |||||||||    
T  17642000 ttggctttcgcaccagtttccgacccaccaaaggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaagtgttgttccccctgggaat 17642099  T
Q  189 agaacccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaaa 247  Q
     |||||| |||||||  || ||||||| ||| |||||||||||| ||| ||||||||||    
T  17642100 cgaacccagtatttcctgggtacgtccgtggaaggagctccttgtcactggagcccaaa 17642158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 94 - 244
Target Start/End: Complemental strand, 26325919 - 26325769
Alignment:
Q  94 tttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaac 193  Q
    |||||||| |||||||| | ||| || | ||||||||||||| ||||| ||| ||||||||||||||||||||||| ||||||||  |||||||| ||||    
T  26325919 tttcgcaccggtttccgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactgaccaagtgttgttcccgctgggaatcgaac 26325820  T
Q  194 ccggtatttcacggatacgtccttggtaggagctccttgccaccggagccc 244  Q
    ||| |||| | ||||||||||||||  |||||||||||||||| |||||||    
T  26325819 ccgatattcctcggatacgtccttgaaaggagctccttgccactggagccc 26325769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 79 - 246
Target Start/End: Complemental strand, 49078236 - 49078069
Alignment:
Q  79 ttttttattcttgggtttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcc 178  Q
    |||||| || |||| |||||||| |||||||| |  || || | || |||||||||| ||||| ||| ||||||||||||||||| ||||| |||||| |    
T  49078236 ttttttttttttggctttcgcaccggtttccgacctaccaatggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgtttc 49078137  T
Q  179 tcctgggaatagaacccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaa 246  Q
     ||||||||| |||||||||||| | ||||||||||||| | |||||||||||||||| |||||||||    
T  49078136 ccctgggaatcgaacccggtattccccggatacgtccttagaaggagctccttgccactggagcccaa 49078069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 101 - 247
Target Start/End: Original strand, 33418123 - 33418269
Alignment:
Q  101 ctggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtat 200  Q
    |||||||||| |  || |||| ||||||||||||| ||||||||||||||||||||||||||| ||||||||||| || ||| ||||| ||| |||||||    
T  33418123 ctggtttccgaccgaccaaaggtggacgactaatccggctcgtgcatagaggcatgcgcactggccaagcgttgtcccccctaggaatcgaatccggtat 33418222  T
Q  201 ttcacggatacgtccttggtaggagctccttgccaccggagcccaaa 247  Q
    |   ||| |||||| |||| |||||||||||||||| ||||||||||    
T  33418223 tctccgggtacgtctttggaaggagctccttgccactggagcccaaa 33418269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 94 - 247
Target Start/End: Complemental strand, 10422895 - 10422742
Alignment:
Q  94 tttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaac 193  Q
    |||||||| |||||||| |  || |||| ||||||||||||| ||||| ||| ||||||||||||||||| ||||| |||||||||||| | ||| ||||    
T  10422895 tttcgcaccggtttccgacttaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttcctcctagaaatcgaac 10422796  T
Q  194 ccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaaa 247  Q
    |||||||| | || ||||||| |||| |||||||||||||||| | ||||||||    
T  10422795 ccggtattccccgaatacgtcattggaaggagctccttgccactgtagcccaaa 10422742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 94 - 246
Target Start/End: Original strand, 2980932 - 2981084
Alignment:
Q  94 tttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaac 193  Q
    |||||||| | |||||| | ||||||| |||||||||||||| | ||||||| ||||||||||| ||||| ||||| ||||||||  |||||||| ||||    
T  2980932 tttcgcaccgatttccgacccactaaacatggacgactaatccgactcgtgcgtagaggcatgcacactggccaagtgttgttcccgctgggaatcgaac 2981031  T
Q  194 ccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaa 246  Q
    || ||||| | ||||||||||| ||| ||||||||||||||||  ||||||||    
T  2981032 ccagtattccccggatacgtccctggaaggagctccttgccactagagcccaa 2981084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 127 - 247
Target Start/End: Complemental strand, 18915941 - 18915821
Alignment:
Q  127 cgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggagc 226  Q
    ||||||||| ||||||||| ||||||||||| ||||| ||||| |||||||| ||||||||| |||||||||||| | ||| ||||||||||| || |||    
T  18915941 cgactaatccggctcgtgcgtagaggcatgcacactggccaagtgttgttccccctgggaatcgaacccggtattccccgggtacgtccttggaagaagc 18915842  T
Q  227 tccttgccaccggagcccaaa 247  Q
    |||||||||| | ||||||||    
T  18915841 tccttgccactgaagcccaaa 18915821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 125 - 247
Target Start/End: Complemental strand, 32947 - 32825
Alignment:
Q  125 gacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtagga 224  Q
    ||||||||||  ||||| ||| |||||||||| ||||||||||||||||||||||||||||||| | ||||| |||| | | | ||||||||||| ||||    
T  32947 gacgactaattcggctcatgcgtagaggcatgtgcactgaccaagcgttgttcctcctgggaatcggacccgatattcccccggtacgtccttggaagga 32848  T
Q  225 gctccttgccaccggagcccaaa 247  Q
    |||| ||||||| ||||||||||    
T  32847 gctcattgccactggagcccaaa 32825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 94 - 247
Target Start/End: Original strand, 10172972 - 10173125
Alignment:
Q  94 tttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaac 193  Q
    |||||||| |||||||| | ||| |||| ||| ||| ||||| ||||| ||| |||||||||| |||||| ||||||||||||| |  ||||||| |||     
T  10172972 tttcgcaccggtttccgacccaccaaaggtgggcgagtaatccggctcatgcgtagaggcatgggcactggccaagcgttgttctttatgggaattgaat 10173071  T
Q  194 ccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaaa 247  Q
    |||||||| | | ||||||||||||| |||||| ||||||||| ||||||||||    
T  10173072 ccggtattccccagatacgtccttggaaggagcaccttgccactggagcccaaa 10173125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 123 - 248
Target Start/End: Original strand, 30927757 - 30927882
Alignment:
Q  123 tggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtag 222  Q
    ||||||||||||| ||||| ||| ||||||||||| || || ||||||||||||||  |||| ||| ||||||| |||||| | | ||||||||||| ||    
T  30927757 tggacgactaatccggctcatgcgtagaggcatgcacattggccaagcgttgttccctctggaaatcgaacccgatatttcccaggtacgtccttggaag 30927856  T
Q  223 gagctccttgccaccggagcccaaaa 248  Q
    |||||||||||||| |||| ||||||    
T  30927857 gagctccttgccactggagtccaaaa 30927882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 94 - 246
Target Start/End: Original strand, 11397890 - 11398041
Alignment:
Q  94 tttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaac 193  Q
    |||||||| | |||||| | ||| |||| ||||||||||||| | ||| ||| ||||||||| |||| || |||| ||||||||| ||| ||||| ||||    
T  11397890 tttcgcaccgatttccgacccaccaaaggtggacgactaatccgactcatgcgtagaggcatacgcattggccaaacgttgttcc-cctcggaatcgaac 11397988  T
Q  194 ccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaa 246  Q
    ||||||||   ||||||| ||||||| |||||||||||||||| |||||||||    
T  11397989 ccggtattctccggatacatccttggaaggagctccttgccactggagcccaa 11398041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 118 - 246
Target Start/End: Original strand, 33498864 - 33498992
Alignment:
Q  118 aaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtcctt 217  Q
    |||| ||||||||||||| ||||| ||| ||||||||||||||||| |||||||||| |||||||| |||| |||||||||||||  | | ||| |||||    
T  33498864 aaaggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgctcctcctgagaatcgaacccggtattttccaggtacatcctt 33498963  T
Q  218 ggtaggagctccttgccaccggagcccaa 246  Q
       |||| ||||||||||| |||||||||    
T  33498964 aaaaggaactccttgccactggagcccaa 33498992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 98 - 246
Target Start/End: Original strand, 40288482 - 40288630
Alignment:
Q  98 gcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccgg 197  Q
    ||||||||||||| | ||| || ||||  ||||||||| ||||||||  |||||||||||  |||| |||| ||||||||| ||||| ||| ||||||||    
T  40288482 gcactggtttccgacccaccaaggatgagcgactaatccggctcgtgtgtagaggcatgcatactggccaaccgttgttccccctggaaatcgaacccgg 40288581  T
Q  198 tatttcacggatacgtccttggtaggagctccttgccaccggagcccaa 246  Q
    |||| | || |||||||||||| | ||||||||||||||  ||||||||    
T  40288582 tattccccgaatacgtccttggaaagagctccttgccactcgagcccaa 40288630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 128 - 244
Target Start/End: Original strand, 48798105 - 48798221
Alignment:
Q  128 gactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggagct 227  Q
    |||||||| ||||| ||| ||||||||||||||||   ||||||||||||| ||||| ||| ||||||| |||| | |||||||||| |||| |||||||    
T  48798105 gactaatccggctcatgcgtagaggcatgcgcactagtcaagcgttgttccccctggaaatcgaacccgatattccccggatacgtcattggaaggagct 48798204  T
Q  228 ccttgccaccggagccc 244  Q
    ||||||||| |||||||    
T  48798205 ccttgccactggagccc 48798221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 94 - 247
Target Start/End: Original strand, 12036744 - 12036898
Alignment:
Q  94 tttcgcactggttt-ccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaa 192  Q
    |||||||||||||| |||   ||| |||| ||||||| ||||| ||||||||| ||||||||||||||||| |||||| ||||||| ||| |||||  ||    
T  12036744 tttcgcactggttttccgatccaccaaaggtggacgattaatctggctcgtgcgtagaggcatgcgcactggccaagcattgttccccctaggaatcaaa 12036843  T
Q  193 cccggtatt-tcacggatacgtccttggtaggagctccttgccaccggagcccaaa 247  Q
    ||| ||||| ||  || ||||||||||| ||||||| |||||||||||||||||||    
T  12036844 cccagtattctctagg-tacgtccttggaaggagcttcttgccaccggagcccaaa 12036898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 94 - 235
Target Start/End: Complemental strand, 16956573 - 16956432
Alignment:
Q  94 tttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaac 193  Q
    ||||||||||||||||| | ||| |||| ||   |||||||| ||||||||| |||||||||||||||||  ||| ||||||| | |||| |||  ||||    
T  16956573 tttcgcactggtttccgacccaccaaaggtgagtgactaatccggctcgtgcgtagaggcatgcgcactggtcaaacgttgttacccctgagaaccgaac 16956474  T
Q  194 ccggtatttcacggatacgtccttggtaggagctccttgcca 235  Q
     ||||||| | ||| ||||||||||| |||||||||||||||    
T  16956473 acggtattccccgggtacgtccttggaaggagctccttgcca 16956432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 151 - 236
Target Start/End: Original strand, 34334353 - 34334438
Alignment:
Q  151 ggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggagctccttgccac 236  Q
    ||||||||||||| ||||| |||||||| ||||||||| |||||||||||| | ||||||||||||||| | ||||||||||||||    
T  34334353 ggcatgcgcactggccaagtgttgttccccctgggaatcgaacccggtattccccggatacgtccttggaatgagctccttgccac 34334438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 127 - 236
Target Start/End: Original strand, 50503395 - 50503504
Alignment:
Q  127 cgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggagc 226  Q
    |||| |||| ||||||||| |||||||||||||||||  |||| |||||||| ||||||||| ||||||| |||| | ||||||||||||||  ||||||    
T  50503395 cgacaaatccggctcgtgcgtagaggcatgcgcactggtcaagtgttgttccccctgggaatcgaacccgatattccccggatacgtccttgaaaggagc 50503494  T
Q  227 tccttgccac 236  Q
    |||| |||||    
T  50503495 tcctcgccac 50503504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 127 - 247
Target Start/End: Complemental strand, 15466039 - 15465919
Alignment:
Q  127 cgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggagc 226  Q
    |||| |||||| ||||||| |||||||||| ||||||||||||||||||||| ||||| ||| ||||| |||||| | |  |||||||||||| ||||||    
T  15466039 cgaccaatcagactcgtgcgtagaggcatgtgcactgaccaagcgttgttccccctggaaatcgaacctggtattccccaaatacgtccttggaaggagc 15465940  T
Q  227 tccttgccaccggagcccaaa 247  Q
     | ||| ||| ||||||||||    
T  15465939 cctttgtcactggagcccaaa 15465919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 118 - 245
Target Start/End: Complemental strand, 10336599 - 10336472
Alignment:
Q  118 aaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtcctt 217  Q
    |||| ||||||| ||||| ||||| ||| |||||||||||||||||  ||||||||||||| ||||  ||| ||||||| ||||   |||||||||| ||    
T  10336599 aaaggtggacgattaatccggctcatgcgtagaggcatgcgcactggtcaagcgttgttccccctgaaaatcgaacccgatattctccggatacgtcttt 10336500  T
Q  218 ggtaggagctccttgccaccggagccca 245  Q
    || |||||||||||||||| ||| ||||    
T  10336499 ggaaggagctccttgccactggaaccca 10336472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 132 - 247
Target Start/End: Complemental strand, 34878059 - 34877944
Alignment:
Q  132 aatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggagctcctt 231  Q
    |||| ||||||||  ||||||||||||||||| ||||| |||||||| ||| ||||| ||||| |||||| | || |||||||||||| ||| |||||||    
T  34878059 aatctggctcgtgtgtagaggcatgcgcactggccaagtgttgttccgcctaggaatcgaacctggtattccccgaatacgtccttggaaggtgctcctt 34877960  T
Q  232 gccaccggagcccaaa 247  Q
    ||||| | ||||||||    
T  34877959 gccactgaagcccaaa 34877944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 79 - 225
Target Start/End: Complemental strand, 37339942 - 37339795
Alignment:
Q  79 ttttttattcttgggtttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgt-tc 177  Q
    |||||| || |||| |||||||| |||||||  | ||| |||| ||| ||||||||| ||||||||| | ||||||||||||||| |||||||||||  |    
T  37339942 ttttttttttttggctttcgcaccggtttccaacccaccaaaggtgggcgactaatccggctcgtgcgttgaggcatgcgcactggccaagcgttgtccc 37339843  T
Q  178 ctcctgggaatagaacccggtatttcacggatacgtccttggtaggag 225  Q
    | ||||||||| |||||||||||| | ||| ||| ||||||| |||||    
T  37339842 cccctgggaatcgaacccggtattccccgggtacatccttggaaggag 37339795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 128 - 230
Target Start/End: Original strand, 33004050 - 33004152
Alignment:
Q  128 gactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggagct 227  Q
    |||||||| ||||||||| ||||||||||||||||| |||||| ||||| | ||||| ||| ||| ||| |||| | ||||||||||||||| |||||||    
T  33004050 gactaatccggctcgtgcgtagaggcatgcgcactggccaagcattgtttcccctggaaatcgaatccgatattccccggatacgtccttggaaggagct 33004149  T
Q  228 cct 230  Q
    |||    
T  33004150 cct 33004152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 94 - 235
Target Start/End: Complemental strand, 2567383 - 2567242
Alignment:
Q  94 tttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaac 193  Q
    ||||| || |||||||| | ||| ||||||||||| |||||| | ||||||  ||||||||||||||||| ||||||||||||   || |  ||| ||||    
T  2567383 tttcgtaccggtttccgacccaccaaagatggacggctaatctgactcgtgagtagaggcatgcgcactggccaagcgttgttttccccgaaaatcgaac 2567284  T
Q  194 ccggtatttcacggatacgtccttggtaggagctccttgcca 235  Q
    ||||||||   || |||||||||||| |||||||||||||||    
T  2567283 ccggtattctccgaatacgtccttggaaggagctccttgcca 2567242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 129 - 246
Target Start/End: Complemental strand, 6563513 - 6563396
Alignment:
Q  129 actaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggagctc 228  Q
    ||||||| ||||||||| ||||| |||| |||||| |||||||||||||| ||| ||||| ||||||||| ||   ||| ||| ||||||| ||||||||    
T  6563513 actaatctggctcgtgcgtagagacatgtgcactggccaagcgttgttccccctaggaatcgaacccggtgttcttcgggtacatccttggaaggagctc 6563414  T
Q  229 cttgccaccggagcccaa 246  Q
    |||||||| |||| ||||    
T  6563413 cttgccactggagtccaa 6563396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 94 - 243
Target Start/End: Original strand, 9659180 - 9659328
Alignment:
Q  94 tttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaac 193  Q
    |||||||| |||||||  | ||| |||| ||||||||||||| ||||| ||| || |||||||||||||   ||| ||||||||| ||||||||| ||||    
T  9659180 tttcgcaccggtttccaacccaccaaaggtggacgactaatccggctcatgcgtaaaggcatgcgcactagtcaaacgttgttcc-cctgggaatcgaac 9659278  T
Q  194 ccggtatttcacggatacgtccttggtaggagctccttgccaccggagcc 243  Q
    |||||||| | ||  ||||||||| | | |||||||||||||| ||||||    
T  9659279 ccggtattccccgagtacgtccttagaatgagctccttgccactggagcc 9659328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 81 - 234
Target Start/End: Original strand, 14254256 - 14254409
Alignment:
Q  81 ttttattcttgggtttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctc 180  Q
    ||||||| |||| ||| ||| ||||||||| | ||  |||| ||||||||||||| ||||| ||| || ||||||||| |||| |||||||||||||| |    
T  14254256 ttttatttttggattttgcaatggtttccgacccatcaaaggtggacgactaatccggctcatgcgtaaaggcatgcgtactggccaagcgttgttcccc 14254355  T
Q  181 ctgggaatagaacccggtatttcacggatacgtccttggtaggagctccttgcc 234  Q
    |||  ||| |||| ||||||| | || |||||||||||| | ||| ||||||||    
T  14254356 ctgaaaatcgaactcggtattccccgaatacgtccttggaatgagttccttgcc 14254409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 98 - 247
Target Start/End: Original strand, 31576552 - 31576701
Alignment:
Q  98 gcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccgg 197  Q
    |||| |||||||| ||||  |||||||||||||||| | ||||| ||| ||||||||  |||| || |||||| ||||| | |||| |||| ||||||||    
T  31576552 gcaccggtttccgacacatcaaagatggacgactaagccggctcatgcgtagaggcacacgcattggccaagcattgtttcccctgagaatcgaacccgg 31576651  T
Q  198 tatttcacggatacgtccttggtaggagctccttgccaccggagcccaaa 247  Q
    |||||   |||||||||||| | | ||||||||||||||  |||||||||    
T  31576652 tattttcgggatacgtccttagaatgagctccttgccactagagcccaaa 31576701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 181 - 246
Target Start/End: Complemental strand, 41743293 - 41743228
Alignment:
Q  181 ctgggaatagaacccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaa 246  Q
    |||||||| |||||||||||| | ||||||||||||||| ||||||||||||||||||||||||||    
T  41743293 ctgggaatcgaacccggtattcctcggatacgtccttggaaggagctccttgccaccggagcccaa 41743228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 126 - 247
Target Start/End: Original strand, 47312932 - 47313052
Alignment:
Q  126 acgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggag 225  Q
    |||||||||| ||||| ||| ||||||||| ||||||| |||| ||||||||| ||| |||||  ||||||||||| | | ||||||||||||| ||||     
T  47312932 acgactaatctggctcatgcgtagaggcatacgcactggccaaacgttgttcc-cctaggaatcaaacccggtattccccagatacgtccttggaaggat 47313030  T
Q  226 ctccttgccaccggagcccaaa 247  Q
    ||| ||||||| ||||||||||    
T  47313031 ctcgttgccactggagcccaaa 47313052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 94 - 247
Target Start/End: Original strand, 50371835 - 50371988
Alignment:
Q  94 tttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaac 193  Q
    |||||||| ||||||||   ||| |||||||| ||||||||| |||| |||| |||| ||||||| |||| ||||||||||||| |||||  ||| ||||    
T  50371835 tttcgcaccggtttccgatccaccaaagatgggcgactaatccggcttgtgcgtagaagcatgcgtactggccaagcgttgttcttcctgaaaatcgaac 50371934  T
Q  194 ccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaaa 247  Q
     || |||||  | ||||| ||||| | ||||||||||||||||  |||||||||    
T  50371935 acgctatttttcagatacatccttagaaggagctccttgccacttgagcccaaa 50371988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 118 - 246
Target Start/End: Original strand, 9853302 - 9853430
Alignment:
Q  118 aaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtcctt 217  Q
    |||| ||||||| ||||| || |||||  |||||||||||||||||   || ||||||| | ||| ||||| |||||||||||||  ||| ||| |||||    
T  9853302 aaaggtggacgattaatctggttcgtgtgtagaggcatgcgcactggtaaaacgttgtttcccctaggaatcgaacccggtattttccgggtacatcctt 9853401  T
Q  218 ggtaggagctccttgccaccggagcccaa 246  Q
    || |||||||||||||||| |||||||||    
T  9853402 ggaaggagctccttgccactggagcccaa 9853430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 127 - 247
Target Start/End: Original strand, 32150956 - 32151076
Alignment:
Q  127 cgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggagc 226  Q
    ||||||||  ||||| ||| || |||||||||||||||||||  |||||||| ||||| ||| ||||| | |||| | || | |||||||||| ||||||    
T  32150956 cgactaattcggctcatgcgtaaaggcatgcgcactgaccaaatgttgttccccctggaaatcgaacctgatattcctcgaaaacgtccttggaaggagc 32151055  T
Q  227 tccttgccaccggagcccaaa 247  Q
    |||||||||| ||||||||||    
T  32151056 tccttgccactggagcccaaa 32151076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 79 - 235
Target Start/End: Complemental strand, 34719898 - 34719742
Alignment:
Q  79 ttttttattcttgggtttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcc 178  Q
    |||||| || |||| ||||||||  ||||||| | ||| |||| ||  ||||||||| | ||||||| |||||||||||||||||  |||||||| ||||    
T  34719898 ttttttttttttggctttcgcaccagtttccgacccaccaaaggtgagcgactaatctgactcgtgcgtagaggcatgcgcactggtcaagcgttattcc 34719799  T
Q  179 tcctgggaatagaacccggtatttcacggatacgtccttggtaggagctccttgcca 235  Q
       ||||||| |||||| ||||| | | | ||||||||||| |||||||||||||||    
T  34719798 cagtgggaatcgaacccagtattccccaggtacgtccttggaaggagctccttgcca 34719742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 123 - 218
Target Start/End: Complemental strand, 16263623 - 16263528
Alignment:
Q  123 tggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttg 218  Q
    |||||||||| || ||||  ||| ||||||||||||||||| |||||||||||||||||||| ||| ||||| |||||| | | ||||||||||||    
T  16263623 tggacgactattccggcttatgcgtagaggcatgcgcactggccaagcgttgttcctcctggaaatcgaacctggtattccccagatacgtccttg 16263528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 118 - 247
Target Start/End: Complemental strand, 31152799 - 31152670
Alignment:
Q  118 aaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtcctt 217  Q
    |||| ||||||||||||  | ||||||  |||||||| |||||||||||||||||| |||| || || ||| |||||||||||| |  || ||| |||||    
T  31152799 aaaggtggacgactaatttgactcgtgtgtagaggcacgcgcactgaccaagcgttattcccccgggaaatcgaacccggtattccctgggtacatcctt 31152700  T
Q  218 ggtaggagctccttgccaccggagcccaaa 247  Q
    || | ||||||||||||||  |||||||||    
T  31152699 ggaaagagctccttgccactagagcccaaa 31152670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 140 - 246
Target Start/End: Original strand, 15238153 - 15238259
Alignment:
Q  140 tcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggagctccttgccaccgg 239  Q
    |||||| ||||||||||| || || |||||||||| ||| ||||||||| ||||||| |||| |   | ||||||||||| |||||||||||||||  ||    
T  15238153 tcgtgcgtagaggcatgctcattggccaagcgttgctccccctgggaatcgaacccgatattccctaggtacgtccttggaaggagctccttgccattgg 15238252  T
Q  240 agcccaa 246  Q
    |||||||    
T  15238253 agcccaa 15238259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 114 - 236
Target Start/End: Original strand, 17358492 - 17358614
Alignment:
Q  114 cactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgt 213  Q
    ||||||||||| || ||||||| ||||| ||| || ||||||||||| ||  ||||||||||||  |||| |||| |||||||||||| | |  ||||||    
T  17358492 cactaaagatgaacaactaatcgggctcatgcgtaaaggcatgcgcattggtcaagcgttgttctccctgagaatcgaacccggtattccccaaatacgt 17358591  T
Q  214 ccttggtaggagctccttgccac 236  Q
    |||||  | ||||||||||||||    
T  17358592 ccttgaaatgagctccttgccac 17358614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 114 - 228
Target Start/End: Original strand, 18649373 - 18649487
Alignment:
Q  114 cactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgt 213  Q
    |||||||| ||| ||| ||||| ||||||| | |||||||||||||||||  ||||||||||||| ||||  ||| ||||||| ||||   | |||||||    
T  18649373 cactaaaggtgggcgattaatctggctcgtacgtagaggcatgcgcactggtcaagcgttgttccccctgaaaatcgaacccgatattctccagatacgt 18649472  T
Q  214 ccttggtaggagctc 228  Q
    |||||| ||||||||    
T  18649473 ccttggaaggagctc 18649487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 118 - 247
Target Start/End: Complemental strand, 5504114 - 5503985
Alignment:
Q  118 aaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtcctt 217  Q
    |||| ||||||||||||| ||||| ||| |||||||||| ||||| | |||||||||||   |||| |||| ||||| | |||| | | ||||||| ||     
T  5504114 aaaggtggacgactaatccggctcatgcgtagaggcatgtgcactaatcaagcgttgttttccctgagaatcgaacctgatattccccagatacgttctc 5504015  T
Q  218 ggtaggagctccttgccaccggagcccaaa 247  Q
    || |||||||||||||||| ||| ||||||    
T  5504014 ggaaggagctccttgccactggaacccaaa 5503985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 196
Target Start/End: Original strand, 21849239 - 21849307
Alignment:
Q  127 cgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccg 196  Q
    ||||||||| ||||||||| ||||||||||||||||  |||||||||||||| ||||||||| |||||||    
T  21849239 cgactaatccggctcgtgcgtagaggcatgcgcactagccaagcgttgttcc-cctgggaatcgaacccg 21849307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 114 - 231
Target Start/End: Complemental strand, 26258782 - 26258666
Alignment:
Q  114 cactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgt 213  Q
    |||||||| ||||||| ||||| | ||| ||| || ||||||| ||||||||||||||||| || ||||| |||| ||| |||||||| | ||| |||||    
T  26258782 cactaaaggtggacgattaatccgactcatgcgtaaaggcatgtgcactgaccaagcgttg-tcttcctgagaatcgaatccggtattccccgggtacgt 26258684  T
Q  214 ccttggtaggagctcctt 231  Q
    | |||| |||||||||||    
T  26258683 ctttggaaggagctcctt 26258666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 94 - 246
Target Start/End: Complemental strand, 26660244 - 26660093
Alignment:
Q  94 tttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaac 193  Q
    |||||||| |||||||| | ||| |||| ||| ||||||||| ||||| ||| |||||||||||| ||||| |||  |||||||| | ||| ||| ||||    
T  26660244 tttcgcaccggtttccgacccaccaaaggtgg-cgactaatccggctcatgcgtagaggcatgcgtactgatcaaatgttgttccccgtggaaatcgaac 26660146  T
Q  194 ccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaa 246  Q
    |||||||| | || ||||||| || | || | ||| ||||||| |||||||||    
T  26660145 ccggtattccccgaatacgtcattcgaagaaactctttgccactggagcccaa 26660093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 121 - 213
Target Start/End: Complemental strand, 44969744 - 44969653
Alignment:
Q  121 gatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgt 213  Q
    ||||||||||||||| ||||| ||| ||| ||||||| ||||| |||||||||||| |||||| |||| ||||| |||||||| ||| |||||    
T  44969744 gatggacgactaatccggctcatgcgtaggggcatgcacactggccaagcgttgtt-ctcctgagaatcgaacctggtatttctcgggtacgt 44969653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 94 - 169
Target Start/End: Original strand, 4581683 - 4581758
Alignment:
Q  94 tttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaag 169  Q
    |||||||| |||||||| | ||| |||| |||||||||| || ||||||||| ||||||||||||||||| |||||    
T  4581683 tttcgcaccggtttccgacccaccaaaggtggacgactattccggctcgtgcgtagaggcatgcgcactggccaag 4581758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 118 - 236
Target Start/End: Original strand, 17092502 - 17092620
Alignment:
Q  118 aaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtcctt 217  Q
    |||| ||||||||||||| ||||||||| ||||||||| | ||||| |||| ||||||| | ||||  ||| |||| || |||||| || |||||||| |    
T  17092502 aaaggtggacgactaatccggctcgtgcgtagaggcatacacactggccaatcgttgtttcccctgaaaatcgaactcgatatttcccgaatacgtccat 17092601  T
Q  218 ggtaggagctccttgccac 236  Q
    |  ||||||| ||||||||    
T  17092602 gaaaggagcttcttgccac 17092620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 237
Target Start/End: Complemental strand, 34697409 - 34697299
Alignment:
Q  127 cgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggagc 226  Q
    ||||||||| ||||| ||| ||||||||||| ||||  ||||| |||||||| |||  |||| ||||| |||||| | || ||||||  |||| ||||||    
T  34697409 cgactaatccggctcatgcgtagaggcatgcacactagccaagtgttgttccccctaagaatcgaacctggtattccccgaatacgtttttggaaggagc 34697310  T
Q  227 tccttgccacc 237  Q
    |||||||||||    
T  34697309 tccttgccacc 34697299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 118 - 232
Target Start/End: Complemental strand, 48761259 - 48761145
Alignment:
Q  118 aaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtcctt 217  Q
    |||| |||||||||||||  |||||||| ||||||||||  |||||||||| ||||||||||| ||  ||| ||| || |||||||  |||||| | |||    
T  48761259 aaaggtggacgactaatccagctcgtgcgtagaggcatgtccactgaccaaacgttgttcctcttgaaaatcgaatccagtatttccgggatacattctt 48761160  T
Q  218 ggtaggagctccttg 232  Q
    || ||||| ||||||    
T  48761159 ggaaggagttccttg 48761145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 153 - 247
Target Start/End: Complemental strand, 51437517 - 51437423
Alignment:
Q  153 catgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaaa 247  Q
    |||||||||||  ||||||||||||| | ||||||| ||||||| |||| | ||||||||||||||  |||||||| ||| ||| | ||||||||    
T  51437517 catgcgcactggtcaagcgttgttccccatgggaatcgaacccgatattcctcggatacgtccttgaaaggagctcattgtcactgaagcccaaa 51437423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 182 - 247
Target Start/End: Original strand, 1764278 - 1764343
Alignment:
Q  182 tgggaatagaacccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaaa 247  Q
    ||||||| ||| |||||||||| ||| ||||||||||| |||||||||||||||| | ||||||||    
T  1764278 tgggaatcgaatccggtatttcccgggtacgtccttggaaggagctccttgccacagaagcccaaa 1764343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 118 - 243
Target Start/End: Original strand, 5063869 - 5063993
Alignment:
Q  118 aaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtcctt 217  Q
    |||| ||| |||||||||  |||||||||||||| ||| ||||||| ||||||||||| || |||  |||| ||| ||  |||| | | |||||||||||    
T  5063869 aaaggtgggcgactaatccagctcgtgcatagagacatacgcactggccaagcgttgtgcc-cctaagaatcgaatccaatattccccagatacgtcctt 5063967  T
Q  218 ggtaggagctccttgccaccggagcc 243  Q
    || ||||||| ||||||||| |||||    
T  5063968 ggaaggagcttcttgccaccagagcc 5063993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 94 - 247
Target Start/End: Complemental strand, 18808372 - 18808219
Alignment:
Q  94 tttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaac 193  Q
    |||||||| |||||||| | || ||||| | | ||| ||||| ||||| | |||| ||||||||||||||  |||||||||||||  ||| |||| ||||    
T  18808372 tttcgcaccggtttccgacccaataaagttagtcgaataatccggctcatacataaaggcatgcgcactggtcaagcgttgttccctctgagaattgaac 18808273  T
Q  194 ccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaaa 247  Q
    | | |||| |   ||||||||||||| || | ||| ||||||| ||||||||||    
T  18808272 ctgttattccttagatacgtccttggaagaaactcattgccactggagcccaaa 18808219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 128 - 201
Target Start/End: Original strand, 28324615 - 28324688
Alignment:
Q  128 gactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatt 201  Q
    |||||||| ||||| ||| ||||||||||||||||||||||| |||||| | || |||||| ||||||| ||||    
T  28324615 gactaatccggctcatgcgtagaggcatgcgcactgaccaagtgttgtttccccggggaatcgaacccgatatt 28324688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 127 - 236
Target Start/End: Original strand, 32142880 - 32142988
Alignment:
Q  127 cgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggagc 226  Q
    ||||||||  ||||| ||| || |||||||||||||| ||||| |||||||| ||||  ||| |||||||||||| || || ||||||||||| | ||||    
T  32142880 cgactaattcggctcatgcgtaaaggcatgcgcactggccaagtgttgttccccctgaaaatcgaacccggtattcca-gggtacgtccttggaatgagc 32142978  T
Q  227 tccttgccac 236  Q
    || |||||||    
T  32142979 tctttgccac 32142988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 171 - 247
Target Start/End: Original strand, 892375 - 892451
Alignment:
Q  171 gttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaaa 247  Q
    |||||||| ||| ||||| |||||||||||| | || |||||||||||  |||||||||||||||| | ||||||||    
T  892375 gttgttccccctaggaatcgaacccggtattccccgaatacgtccttgaaaggagctccttgccactgaagcccaaa 892451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 246
Target Start/End: Original strand, 45726466 - 45726586
Alignment:
Q  126 acgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggag 225  Q
    |||||||||| ||||| ||| ||||| ||| ||||||| ||||  ||| ||||||||| |||| ||||| |||||| | ||| |||||||||||  ||||    
T  45726466 acgactaatccggctcatgcgtagagacatacgcactggccaaatgttattcctcctgagaatcgaaccaggtattcctcgggtacgtccttggagggag 45726565  T
Q  226 ctccttgccaccggagcccaa 246  Q
     || |||| || |||||||||    
T  45726566 gtctttgcaactggagcccaa 45726586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 185
Target Start/End: Complemental strand, 10507776 - 10507714
Alignment:
Q  123 tggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctggg 185  Q
    ||||||||||||| ||||| ||| |||||| |||| ||||| |||| ||||||||||||||||    
T  10507776 tggacgactaatccggctcatgcgtagaggtatgcacactggccaaacgttgttcctcctggg 10507714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 201
Target Start/End: Complemental strand, 13262161 - 13262083
Alignment:
Q  123 tggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatt 201  Q
    ||||||||||||| | ||||||| ||||| |||||| | ||||||| ||||||||  ||||| ||| ||||||||||||    
T  13262161 tggacgactaatccgactcgtgcgtagagacatgcgtattgaccaaacgttgttctccctggaaatcgaacccggtatt 13262083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 168
Target Start/End: Complemental strand, 35908836 - 35908791
Alignment:
Q  123 tggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaa 168  Q
    ||||||||||||| ||||| ||| ||||||||||||||||||||||    
T  35908836 tggacgactaatccggctcatgcgtagaggcatgcgcactgaccaa 35908791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 246
Target Start/End: Complemental strand, 42744842 - 42744742
Alignment:
Q  137 ggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggagctccttgccac 236  Q
    ||||||||| ||||||||||| ||||| ||||||||||||||||         |||||||||||| |  || ||||||||||| |||||||| |||||||    
T  42744842 ggctcgtgcgtagaggcatgctcactggccaagcgttgttcctc---------gaacccggtattccctgggtacgtccttggaaggagctcattgccac 42744752  T
Q  237 cggagcccaa 246  Q
     |||| ||||    
T  42744751 tggagtccaa 42744742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 236
Target Start/End: Original strand, 8905211 - 8905293
Alignment:
Q  153 catgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggagctccttgccac 236  Q
    ||||||||||| |||||||||||||| ||| | ||| | ||||| ||||   |||||||||| |||| ||||||||||||||||    
T  8905211 catgcgcactggccaagcgttgttcc-ccttgaaatcgtacccgatattctccggatacgtcattggaaggagctccttgccac 8905293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 123 - 217
Target Start/End: Complemental strand, 13266016 - 13265922
Alignment:
Q  123 tggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtcctt 217  Q
    ||||||||||| | ||||| ||| ||||||||||||||||| | |  |||||||   ||| ||||| ||||| |||||| | |||||||||||||    
T  13266016 tggacgactaacccggctcatgcgtagaggcatgcgcactggctagacgttgttttccctaggaatcgaaccaggtattcctcggatacgtcctt 13265922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 128 - 246
Target Start/End: Complemental strand, 25165473 - 25165357
Alignment:
Q  128 gactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggagct 227  Q
    |||||||| |||| |||| ||||||||||||||||| |  || |||||||| ||||  ||| ||| |||||||| | | | ||||| ||||| |||||||    
T  25165473 gactaatccggcttgtgcctagaggcatgcgcactggcagagtgttgttcc-cctgataatcgaatccggtattccccaggtacgt-cttggaaggagct 25165376  T
Q  228 ccttgccaccggagcccaa 246  Q
    |||||||||  ||||||||    
T  25165375 ccttgccactagagcccaa 25165357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 118 - 176
Target Start/End: Original strand, 38791635 - 38791693
Alignment:
Q  118 aaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgtt 176  Q
    |||||||||||||||||  ||||| ||| ||||||||||||||||  |||| |||||||    
T  38791635 aaagatggacgactaattcggctcatgcgtagaggcatgcgcacttgccaatcgttgtt 38791693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 84; Significance: 2e-39; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 79 - 246
Target Start/End: Original strand, 2467103 - 2467270
Alignment:
Q  79 ttttttattcttgggtttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcc 178  Q
    |||||| || |||| |||||||| |||||||| ||||| ||   ||||||||||||| ||||| ||||||||| ||||||||||| ||||| ||||||||    
T  2467103 ttttttttttttggctttcgcaccggtttccgacacaccaattgtggacgactaatccggctcatgcatagagacatgcgcactggccaagagttgttcc 2467202  T
Q  179 tcctgggaatagaacccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaa 246  Q
     ||||| ||| |||||||||||| | ||||||||||||||| |||||||||||||||| |||||||||    
T  2467203 ccctggaaatcgaacccggtattccccggatacgtccttggaaggagctccttgccactggagcccaa 2467270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 89 - 247
Target Start/End: Complemental strand, 6100587 - 6100429
Alignment:
Q  89 ttgggtttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaat 188  Q
    |||| |||||||  ||||| || | |||||||| || |||||||||| ||||| ||| ||| ||||||||||||| ||||||||||||||||||||||||    
T  6100587 ttggctttcgcagcggttttcgacccactaaaggtgaacgactaatccggctcatgcgtagtggcatgcgcactggccaagcgttgttcctcctgggaat 6100488  T
Q  189 agaacccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaaa 247  Q
     |||||||||||| | ||||||||||||||  |||||||||||||||| | ||||||||    
T  6100487 cgaacccggtattccccggatacgtccttgaaaggagctccttgccactgaagcccaaa 6100429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 79 - 246
Target Start/End: Complemental strand, 10927731 - 10927564
Alignment:
Q  79 ttttttattcttgggtttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcc 178  Q
    |||||| || |||| |||||||  |||||||| | |||||||| || |||||||||| ||||| ||| ||||||||||||||||| ||||||||||||||    
T  10927731 ttttttttttttggctttcgcatcggtttccgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttcc 10927632  T
Q  179 tcctgggaatagaacccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaa 246  Q
    |||| ||||| |||||||||||| | ||| ||||||||||  || ||||||||||||| | |||||||    
T  10927631 tcctaggaatcgaacccggtattccccgggtacgtccttgaaagaagctccttgccactgaagcccaa 10927564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 78 - 246
Target Start/End: Original strand, 15884540 - 15884707
Alignment:
Q  78 gttttttattcttgggtttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttc 177  Q
    ||||||| || |||| |||||||| |||||||| | ||| |||| ||| ||||||||| ||||||||| ||||||||||||||||  ||||| |||||||    
T  15884540 gttttttttttttggttttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcacttgccaagtgttgttc 15884639  T
Q  178 ctcctgggaatagaacccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaa 246  Q
    | ||||||||| |||||||||||| | | | ||||||||||| ||||||||||| |||| |||||||||    
T  15884640 c-cctgggaatcgaacccggtattccccaggtacgtccttggaaggagctccttaccactggagcccaa 15884707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 127 - 246
Target Start/End: Original strand, 14666104 - 14666223
Alignment:
Q  127 cgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggagc 226  Q
    ||||||||| |||| |||| ||||||||||||||||| ||||| |||||| | ||||||||| |||||||||||| | ||||||||||||||| | ||||    
T  14666104 cgactaatctggcttgtgcgtagaggcatgcgcactggccaagtgttgtttcccctgggaatcgaacccggtattccccggatacgtccttggaatgagc 14666203  T
Q  227 tccttgccaccggagcccaa 246  Q
    |||||||||| |||||||||    
T  14666204 tccttgccactggagcccaa 14666223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 137 - 246
Target Start/End: Original strand, 38922457 - 38922566
Alignment:
Q  137 ggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggagctccttgccac 236  Q
    ||||||||| || |||||||||||||| ||||||||||||||  |||||||| |||||||||||| | ||| ||||||||||| ||||||||||||||||    
T  38922457 ggctcgtgcgtaaaggcatgcgcactggccaagcgttgttccctctgggaatcgaacccggtattccccgggtacgtccttggaaggagctccttgccac 38922556  T
Q  237 cggagcccaa 246  Q
     |||||||||    
T  38922557 tggagcccaa 38922566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 94 - 246
Target Start/End: Complemental strand, 17981551 - 17981399
Alignment:
Q  94 tttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaac 193  Q
    |||||||| |||||||| | ||| |||| ||| | ||||||  | ||||||| ||||||||||| |||||  |||| |||||||| ||||||||| ||||    
T  17981551 tttcgcaccggtttccgactcaccaaagctgggcaactaattcgactcgtgcgtagaggcatgcacactggtcaagagttgttccccctgggaatcgaac 17981452  T
Q  194 ccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaa 246  Q
    |||||||||| ||| ||| ||||||| |||||||||||||||| |||||||||    
T  17981451 ccggtatttcccgggtacatccttggaaggagctccttgccactggagcccaa 17981399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 79 - 246
Target Start/End: Complemental strand, 24837367 - 24837200
Alignment:
Q  79 ttttttattcttgggtttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcc 178  Q
    |||||| || |||| ||||||||  |||||||   ||| |||| |||||||||||||  |||||||| ||||||||||  ||||| |||||||||||||     
T  24837367 ttttttttttttggctttcgcaccagtttccgatccaccaaaggtggacgactaatcctgctcgtgcttagaggcatgaacactggccaagcgttgttct 24837268  T
Q  179 tcctgggaatagaacccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaa 246  Q
     ||||||||| |||| ||||||| | ||| ||||| ||||| |||||||||||||||| |||||||||    
T  24837267 ccctgggaatcgaacacggtattccccgggtacgtacttggaaggagctccttgccactggagcccaa 24837200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 94 - 247
Target Start/End: Original strand, 3418513 - 3418666
Alignment:
Q  94 tttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaac 193  Q
    |||||||| |||||| | | |||||||| ||||||||||||| | ||| ||| |||| |||||||||||| ||||| ||||||||||||   ||| ||||    
T  3418513 tttcgcaccggtttctgacccactaaaggtggacgactaatctgactcatgcgtagacgcatgcgcactggccaagtgttgttcctcctaaaaatcgaac 3418612  T
Q  194 ccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaaa 247  Q
    ||| |||| | | ||||||||||||| |||||||||||||||| |||| |||||    
T  3418613 ccgatattccccagatacgtccttggaaggagctccttgccacgggagtccaaa 3418666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 94 - 247
Target Start/End: Complemental strand, 43033011 - 43032858
Alignment:
Q  94 tttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaac 193  Q
    |||||||| |||||| | | ||| |||| ||| ||||||||| ||||||||  ||||||||||||||||| |||||||||||||| ||||||||| |||     
T  43033011 tttcgcaccggtttctgacccaccaaaggtgggcgactaatccggctcgtgtgtagaggcatgcgcactggccaagcgttgttccccctgggaatcgaat 43032912  T
Q  194 ccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaaa 247  Q
    ||| |||||| | ||||| |  |||| |||| ||||||||||| ||||||||||    
T  43032911 ccgatatttcccagatacatttttggaaggaactccttgccactggagcccaaa 43032858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 114 - 246
Target Start/End: Original strand, 1012997 - 1013129
Alignment:
Q  114 cactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgt 213  Q
    |||||||| || |||| ||||  ||||| ||| |||||||||| | |||| |||||||||||||| ||||||||| |||||||||||| | |||||||||    
T  1012997 cactaaaggtgaacgattaattcggctcatgcgtagaggcatgtgtactggccaagcgttgttccccctgggaatcgaacccggtattccccggatacgt 1013096  T
Q  214 ccttggtaggagctccttgccaccggagcccaa 246  Q
    |||||| |  ||||||||||||| |||||||||    
T  1013097 ccttggaaaaagctccttgccactggagcccaa 1013129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 123 - 247
Target Start/End: Complemental strand, 8141183 - 8141059
Alignment:
Q  123 tggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtag 222  Q
    ||||||||||||   |||| ||| ||||||||||||||||| |||||||||||| | ||||| ||| |||||||||||| | || |||||||||||| ||    
T  8141183 tggacgactaattcagctcatgcgtagaggcatgcgcactggccaagcgttgtttcccctggaaatcgaacccggtattccccgaatacgtccttggaag 8141084  T
Q  223 gagctccttgccaccggagcccaaa 247  Q
     ||||||||||||| ||||||||||    
T  8141083 cagctccttgccactggagcccaaa 8141059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 131 - 247
Target Start/End: Original strand, 44893315 - 44893431
Alignment:
Q  131 taatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggagctcct 230  Q
    ||||| ||||||||| ||||||||||| ||||| |||||| ||||||| ||| | ||| |||||||||||| | ||| ||||||||||| ||||||||||    
T  44893315 taatccggctcgtgcgtagaggcatgcacactggccaagcattgttccccctagaaattgaacccggtattccccgggtacgtccttggaaggagctcct 44893414  T
Q  231 tgccaccggagcccaaa 247  Q
    |||||| ||||||||||    
T  44893415 tgccactggagcccaaa 44893431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 81 - 247
Target Start/End: Complemental strand, 14846698 - 14846533
Alignment:
Q  81 ttttattcttgggtttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctc 180  Q
    ||||||| |||| |||||||| | |||||| | ||| |||| ||||||||| ||| | ||| ||| |||||||||||||||||||||| | ||||||| |    
T  14846698 ttttatttttggctttcgcaccgatttccgacccaccaaaggtggacgacttatctgactcatgcgtagaggcatgcgcactgaccaatcattgttcc-c 14846600  T
Q  181 ctgggaatagaacccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaaa 247  Q
    ||| |||| |||||||||||| | ||| ||||||||| | ||||||| |||||||  ||||||||||    
T  14846599 ctgagaatcgaacccggtattccccgggtacgtccttagaaggagcttcttgccagtggagcccaaa 14846533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 123 - 247
Target Start/End: Original strand, 9860024 - 9860149
Alignment:
Q  123 tggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatt-tcacggatacgtccttggta 221  Q
    ||||||||||||| ||||| ||  ||||||||||| ||||| ||||| |||||||| ||||||||| ||||||||||||  | ||||||||||||||| |    
T  9860024 tggacgactaatctggctcatgtgtagaggcatgcacactggccaagtgttgttccccctgggaatcgaacccggtattcccccggatacgtccttggaa 9860123  T
Q  222 ggagctccttgccaccggagcccaaa 247  Q
    ||||||| ||||||| ||| ||||||    
T  9860124 ggagctctttgccactggatcccaaa 9860149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 94 - 246
Target Start/End: Complemental strand, 45521278 - 45521127
Alignment:
Q  94 tttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaac 193  Q
    |||||||| |||||||| | ||  |||| ||  ||||||||| ||||| ||| |||||||||||||||||| |||| |||||||| ||||||||| ||||    
T  45521278 tttcgcaccggtttccgacccatcaaaggtgagcgactaatccggctcatgcgtagaggcatgcgcactgatcaagtgttgttcc-cctgggaatcgaac 45521180  T
Q  194 ccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaa 246  Q
    |||||||| | ||| ||| ||||||| | || ||||||||||| |||||||||    
T  45521179 ccggtattccccgggtacatccttggaatgaactccttgccactggagcccaa 45521127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 94 - 236
Target Start/End: Original strand, 4479296 - 4479437
Alignment:
Q  94 tttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaac 193  Q
    |||||||| |||||||| | ||| |||| |||||||||||||  |||| ||| ||||||||||||||||| |||||||||||||| ||||||||| |||     
T  4479296 tttcgcaccggtttccgacccaccaaaggtggacgactaatccagctcatgcgtagaggcatgcgcactggccaagcgttgttcc-cctgggaatcgaat 4479394  T
Q  194 ccggtatttcacggatacgtccttggtaggagctccttgccac 236  Q
    ||||||||  || | ||||||||||  |||| || ||||||||    
T  4479395 ccggtattctacaggtacgtccttgaaaggaacttcttgccac 4479437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 121 - 247
Target Start/End: Complemental strand, 13085607 - 13085481
Alignment:
Q  121 gatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggt 220  Q
    ||||| ||| ||||| ||||||||| |||||| |||| ||||| | || |||||||||  ||| |||| |||||||||||| | |||||||||||||||     
T  13085607 gatgggcgattaatctggctcgtgcgtagaggtatgcacactggctaaacgttgttccctctgagaatcgaacccggtattccccggatacgtccttgga 13085508  T
Q  221 aggagctccttgccaccggagcccaaa 247  Q
    |||||||||| ||||| ||||||||||    
T  13085507 aggagctcctcgccactggagcccaaa 13085481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 118 - 247
Target Start/End: Complemental strand, 18374096 - 18373967
Alignment:
Q  118 aaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtcctt 217  Q
    |||| ||||||||||||| ||||| ||| |||||||||||||||||  ||||||||||||  |||| |||| ||||| |||||||| ||||||  || ||    
T  18374096 aaagttggacgactaatccggctcatgcgtagaggcatgcgcactggtcaagcgttgttctccctgagaatcgaacctggtatttcccggatatatcttt 18373997  T
Q  218 ggtaggagctccttgccaccggagcccaaa 247  Q
    || | |||||||||||||  ||||||||||    
T  18373996 ggaatgagctccttgccattggagcccaaa 18373967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 118 - 247
Target Start/End: Complemental strand, 43027391 - 43027262
Alignment:
Q  118 aaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtcctt 217  Q
    |||||||||||||||||| ||||| ||| |||||||||||||| ||  ||| ||||||||||||||||||| |||||| ||||| | |  |||||| |||    
T  43027391 aaagatggacgactaatccggctcatgcgtagaggcatgcgcattggacaatcgttgttcctcctgggaatcgaacccagtattccccaaatacgttctt 43027292  T
Q  218 ggtaggagctccttgccaccggagcccaaa 247  Q
    |  | |||||| ||||||| ||||||||||    
T  43027291 gaaatgagctcattgccactggagcccaaa 43027262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 89 - 236
Target Start/End: Complemental strand, 2964191 - 2964044
Alignment:
Q  89 ttgggtttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaat 188  Q
    |||| |||||||| |||||| | | ||| |||| ||| ||||||||| || |||||| ||||||||||| || || |||||||||||||||| | |||||    
T  2964191 ttggctttcgcaccggtttctgacccaccaaaggtgggcgactaatccggttcgtgcgtagaggcatgcacattggccaagcgttgttcctcatcggaat 2964092  T
Q  189 agaacccggtatttcacggatacgtccttggtaggagctccttgccac 236  Q
     |||| ||||||| | ||| ||||| ||||| ||||||| ||||||||    
T  2964091 cgaacacggtattccccgggtacgttcttggaaggagctacttgccac 2964044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 118 - 247
Target Start/End: Complemental strand, 583898 - 583771
Alignment:
Q  118 aaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtcctt 217  Q
    |||| ||| ||||||||| | ||| ||| |||||||||||||||||  |||||||||||||  || ||||| |||||||||||||| ||  |||||||||    
T  583898 aaaggtgggcgactaatccgactcatgcgtagaggcatgcgcactggtcaagcgttgttcc--ctaggaatcgaacccggtatttctcgagtacgtcctt 583801  T
Q  218 ggtaggagctccttgccaccggagcccaaa 247  Q
    || || |||||||||||||  |||||||||    
T  583800 ggaagtagctccttgccactagagcccaaa 583771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 114 - 247
Target Start/End: Original strand, 33401819 - 33401952
Alignment:
Q  114 cactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgt 213  Q
    |||||||| ||| ||||||||| | ||| ||| ||||||||||| |||||  |||| |||||||| ||||  ||| |||||||||||| | ||  |||||    
T  33401819 cactaaaggtgggcgactaatccgactcatgcgtagaggcatgcacactggtcaagtgttgttccccctgaaaatcgaacccggtattccccgagtacgt 33401918  T
Q  214 ccttggtaggagctccttgccaccggagcccaaa 247  Q
    |||||  |||||||||||||||| ||||||||||    
T  33401919 ccttgaaaggagctccttgccactggagcccaaa 33401952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 131 - 247
Target Start/End: Complemental strand, 34846886 - 34846771
Alignment:
Q  131 taatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggagctcct 230  Q
    ||||| |||| |||| |||||||||||  |||| |||||||||||||  | ||||||| |||||||||| ||| ||| ||||||||||| | ||||||||    
T  34846886 taatctggcttgtgcgtagaggcatgcatactggccaagcgttgttcaccatgggaatcgaacccggta-ttcccgggtacgtccttggaatgagctcct 34846788  T
Q  231 tgccaccggagcccaaa 247  Q
    |||||| ||||||||||    
T  34846787 tgccactggagcccaaa 34846771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 139 - 246
Target Start/End: Complemental strand, 13359087 - 13358980
Alignment:
Q  139 ctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggagctccttgccaccg 238  Q
    ||||||| |||||| |||||||||| ||||||||||||||| ||| |||| |||||||||||||  |||| || || |||| ||||||||||| |||| |    
T  13359087 ctcgtgcgtagaggtatgcgcactgtccaagcgttgttccttctgagaatcgaacccggtattttccggacacatctttggaaggagctccttaccactg 13358988  T
Q  239 gagcccaa 246  Q
     |||||||    
T  13358987 aagcccaa 13358980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 125 - 247
Target Start/End: Complemental strand, 22810156 - 22810037
Alignment:
Q  125 gacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtagga 224  Q
    ||||||||||| ||||| |||  |||  |||||||||||||||||||||||||| || |||||| ||||||| | ||   ||||||||||||||| ||||    
T  22810156 gacgactaatctggctcatgcgaaga--catgcgcactgaccaagcgttgttcc-ccagggaatcgaacccgatgttctccggatacgtccttggaagga 22810060  T
Q  225 gctccttgccaccggagcccaaa 247  Q
    ||||||||||||  |||||||||    
T  22810059 gctccttgccactagagcccaaa 22810037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 137 - 247
Target Start/End: Original strand, 34613821 - 34613931
Alignment:
Q  137 ggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggagctccttgccac 236  Q
    ||||| || ||||||||||||| |||| |||  ||||||||||||||||||| ||||||| |||| | ||||||||   |||| |||||||| |||||||    
T  34613821 ggctcatgtatagaggcatgcgtactggccagacgttgttcctcctgggaatcgaacccgatattccccggatacggttttggaaggagctcattgccac 34613920  T
Q  237 cggagcccaaa 247  Q
     ||||||||||    
T  34613921 tggagcccaaa 34613931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 79 - 183
Target Start/End: Original strand, 13357941 - 13358045
Alignment:
Q  79 ttttttattcttgggtttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcc 178  Q
    |||||| || |||| ||| |||| |||||||| | ||||||||  |||||||||||| ||||||||||||||||||||| || || |||| |||||||||    
T  13357941 ttttttttttttggtttttgcaccggtttccgacccactaaagggggacgactaatccggctcgtgcatagaggcatgcacattggccaaacgttgttcc 13358040  T
Q  179 tcctg 183  Q
     ||||    
T  13358041 ccctg 13358045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 247
Target Start/End: Original strand, 68130 - 68251
Alignment:
Q  126 acgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggag 225  Q
    |||| ||||| ||||||||  || ||||||||  |||| |||| |||||||||||||| |||| ||||||| | || | ||   |||||||||| |||||    
T  68130 acgattaatccggctcgtgtgtaaaggcatgcatactggccaaacgttgttcctcctgagaatcgaacccgatcttccccgagcacgtccttggaaggag 68229  T
Q  226 ctccttgccaccggagcccaaa 247  Q
    ||||||||||||||||| ||||    
T  68230 ctccttgccaccggagctcaaa 68251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 154 - 247
Target Start/End: Complemental strand, 6940608 - 6940515
Alignment:
Q  154 atgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaaa 247  Q
    |||||||||  |||||||||||||| ||||| ||| ||||||| |||||  ||||||| ||||||| | ||||||||| |||| ||||||||||    
T  6940608 atgcgcactagccaagcgttgttccacctggaaatcgaacccgatattttccggatacctccttggaatgagctccttaccactggagcccaaa 6940515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 159 - 228
Target Start/End: Original strand, 22276545 - 22276614
Alignment:
Q  159 cactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggagctc 228  Q
    ||||||||||| |||||||||||| |||||||||||||||||||   || ||||||||||| ||||||||    
T  22276545 cactgaccaagtgttgttcctcctaggaatagaacccggtattttctgggtacgtccttggaaggagctc 22276614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 118 - 247
Target Start/End: Complemental strand, 26571010 - 26570881
Alignment:
Q  118 aaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtcctt 217  Q
    |||| ||||||||||||| ||||| ||| |||| |||| | ||||| |||||||||||||| ||| ||||| ||||||| |||||| | ||||| |||||    
T  26571010 aaaggtggacgactaatccggctcatgcgtagatgcatacacactggccaagcgttgttccccctaggaattgaacccgatatttcccagatacatcctt 26570911  T
Q  218 ggtaggagctccttgccaccggagcccaaa 247  Q
       ||  ||||||||||||  |||||||||    
T  26570910 aaaagtcgctccttgccactagagcccaaa 26570881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 94 - 247
Target Start/End: Original strand, 34710567 - 34710720
Alignment:
Q  94 tttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaac 193  Q
    ||||| |||||||| || | ||| || |||||||||||| || | || |||  || |||||||||||||  ||||| |||||| | ||||||||| |||     
T  34710567 tttcggactggttttcgacccaccaatgatggacgactagtccgacttgtgtgtaaaggcatgcgcactagccaagtgttgtttcccctgggaatcgaat 34710666  T
Q  194 ccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaaa 247  Q
    |||||||||  ||  ||||||||||| || | || |||||||||||||||||||    
T  34710667 ccggtattttccgagtacgtccttggaagaaacttcttgccaccggagcccaaa 34710720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 80 - 247
Target Start/End: Original strand, 10535390 - 10535556
Alignment:
Q  80 tttttattcttgggtttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcct 179  Q
    ||||| || |||| ||||||||  ||||||| |  || |||| || |||||||||  ||||| ||| | ||| |||||||||||  |||||| ||||||     
T  10535390 tttttttttttggctttcgcaccagtttccgacttaccaaaggtgaacgactaattcggctcatgcgtggagacatgcgcactggtcaagcggtgttcc- 10535488  T
Q  180 cctgggaatagaacccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaaa 247  Q
    ||||  ||| |||||  ||||| | ||||||||||||||| |||||||||||||||| |||| |||||    
T  10535489 cctgaaaattgaaccatgtattcctcggatacgtccttggaaggagctccttgccactggagtccaaa 10535556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 122 - 236
Target Start/End: Original strand, 44031463 - 44031582
Alignment:
Q  122 atggacgactaatcaggctcgtgcatagaggcatgcgcact-----gaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtcct 216  Q
    |||| ||||||||| |||||||||  |||||||||| ||||     | |||||||||||||| ||||| ||| ||||||| |||||| ||| ||| ||||    
T  44031463 atgggcgactaatccggctcgtgcgcagaggcatgcacactacactggccaagcgttgttccccctggaaatcgaacccgatatttcccggttacatcct 44031562  T
Q  217 tggtaggagctccttgccac 236  Q
    ||| ||||| ||||||||||    
T  44031563 tggaaggagttccttgccac 44031582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 201
Target Start/End: Complemental strand, 6042898 - 6042824
Alignment:
Q  127 cgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatt 201  Q
    ||||||||| ||||| ||| |  |||||||||||||| |||||||||||||| | ||||||| ||||||||||||    
T  6042898 cgactaatccggctcatgcgtttaggcatgcgcactggccaagcgttgttccccttgggaatcgaacccggtatt 6042824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 118 - 247
Target Start/End: Original strand, 24938586 - 24938715
Alignment:
Q  118 aaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtcctt 217  Q
    |||| |||| |||||||| || || ||| |||||||||||||| |||||||| |||||| |  || | ||| ||||| ||||||   ||| || ||||||    
T  24938586 aaaggtggatgactaatccggttcatgcgtagaggcatgcgcattgaccaagtgttgtttcatctagaaatcgaacctggtattctccgggtatgtcctt 24938685  T
Q  218 ggtaggagctccttgccaccggagcccaaa 247  Q
    ||  ||||||||||||||| ||||||||||    
T  24938686 ggagggagctccttgccactggagcccaaa 24938715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 118 - 178
Target Start/End: Complemental strand, 22958856 - 22958796
Alignment:
Q  118 aaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcc 178  Q
    |||| ||||||||||||| ||||| ||||||||| ||||| |||||||||||| |||||||    
T  22958856 aaaggtggacgactaatccggctcatgcatagagacatgcacactgaccaagcattgttcc 22958796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 118 - 233
Target Start/End: Complemental strand, 11786001 - 11785887
Alignment:
Q  118 aaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtcctt 217  Q
    |||||||  ||| ||||| ||||| ||| ||||||||||| ||||| |||| ||||| ||| ||| ||||| ||| |||||||| | ||| |||||||||    
T  11786001 aaagatgagcgattaatctggctcatgcgtagaggcatgcacactgcccaaacgttgctcc-ccttggaatcgaatccggtattccccgggtacgtcctt 11785903  T
Q  218 ggtaggagctccttgc 233  Q
    || | |||||||||||    
T  11785902 ggaatgagctccttgc 11785887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 236
Target Start/End: Complemental strand, 20240635 - 20240538
Alignment:
Q  139 ctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggagctccttgccac 236  Q
    ||||||| |||||||||||||||||||||| |||| ||  |||||| ||| |||| || |||| |   ||||||||||||| | |||||| |||||||    
T  20240635 ctcgtgcgtagaggcatgcgcactgaccaaacgttatttttcctggaaatcgaactcgatattccctagatacgtccttggaatgagctctttgccac 20240538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 236
Target Start/End: Original strand, 20252432 - 20252529
Alignment:
Q  139 ctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggagctccttgccac 236  Q
    ||||||| |||||||||||||||||||||| |||| ||  |||||| ||| |||| || |||| |   ||||||||||||| | |||||| |||||||    
T  20252432 ctcgtgcgtagaggcatgcgcactgaccaaacgttatttttcctggaaatcgaactcgatattccctagatacgtccttggaatgagctctttgccac 20252529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 195
Target Start/End: Complemental strand, 27975981 - 27975900
Alignment:
Q  114 cactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaaccc 195  Q
    |||||||| ||| ||| ||||| |||||  || ||||||||||| |||||| |||| ||||||||| |||||||| ||||||    
T  27975981 cactaaaggtgggcgattaatccggctcaagcgtagaggcatgcacactgatcaagtgttgttccttctgggaatcgaaccc 27975900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 195
Target Start/End: Complemental strand, 28033250 - 28033169
Alignment:
Q  114 cactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaaccc 195  Q
    |||||||| ||| ||| ||||| |||||  || ||||||||||| |||||| |||| ||||||||| |||||||| ||||||    
T  28033250 cactaaaggtgggcgattaatccggctcaagcgtagaggcatgcacactgatcaagtgttgttccttctgggaatcgaaccc 28033169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 137 - 189
Target Start/End: Original strand, 8586982 - 8587034
Alignment:
Q  137 ggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaata 189  Q
    ||||| ||| |||||| |||||||||| |||||||||||||| ||||||||||    
T  8586982 ggctcatgcgtagaggtatgcgcactggccaagcgttgttccccctgggaata 8587034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 247
Target Start/End: Original strand, 33935768 - 33935888
Alignment:
Q  127 cgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggagc 226  Q
    ||||||||| | ||| ||| || |||||||||||||| ||||| |||||||  ||| ||||| ||| |||||||| |  || ||| |||||   ||||||    
T  33935768 cgactaatccgactcatgcgtataggcatgcgcactggccaagtgttgttctccctaggaatcgaatccggtattccttgggtacatccttaaaaggagc 33935867  T
Q  227 tccttgccaccggagcccaaa 247  Q
    ||||||| || ||||||||||    
T  33935868 tccttgcaactggagcccaaa 33935888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 246
Target Start/End: Complemental strand, 38235982 - 38235863
Alignment:
Q  127 cgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggagc 226  Q
    |||||||||  |||||||||||||  |||| ||| || |||||| |||||    |||||||| ||| |||||| ||| | | ||||||||||| || ||     
T  38235982 cgactaatcccgctcgtgcatagaatcatgtgcaatggccaagcattgttttctctgggaatcgaatccggtacttcccaggtacgtccttggaagaagt 38235883  T
Q  227 tccttgccaccggagcccaa 246  Q
    |||||||||| |||||||||    
T  38235882 tccttgccactggagcccaa 38235863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 178
Target Start/End: Original strand, 11298262 - 11298351
Alignment:
Q  89 ttgggtttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcc 178  Q
    |||| |||||||| |||||||| | ||| |||| ||  ||| ||||  ||||| ||||||||||||||||||||| | ||| ||||||||    
T  11298262 ttggctttcgcaccggtttccgacccaccaaaggtgagcgattaatttggctcatgcatagaggcatgcgcactggctaagtgttgttcc 11298351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 81; Significance: 1e-37; HSPs: 60)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 118 - 246
Target Start/End: Complemental strand, 1797545 - 1797417
Alignment:
Q  118 aaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtcctt 217  Q
    ||||||||||||||| || ||||||||| ||||| ||||||||||| |||||||||||| | ||||||||| |||||||||||| | |||||||||||||    
T  1797545 aaagatggacgactagtccggctcgtgcgtagagacatgcgcactggccaagcgttgtttcccctgggaatcgaacccggtattcctcggatacgtcctt 1797446  T
Q  218 ggtaggagctccttgccaccggagcccaa 246  Q
    || |||||||||||||||| |||||||||    
T  1797445 ggaaggagctccttgccactggagcccaa 1797417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 94 - 246
Target Start/End: Complemental strand, 48804792 - 48804640
Alignment:
Q  94 tttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaac 193  Q
    |||||||| |||||||| | ||| || | ||||||||||||| ||||| ||| ||||||||||||||||| ||||| |||||||| | ||||||| ||||    
T  48804792 tttcgcaccggtttccgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccttgggaatcgaac 48804693  T
Q  194 ccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaa 246  Q
    |||||||| | ||||||||||||||| |||||||||||||||| |||||||||    
T  48804692 ccggtattccccggatacgtccttggaaggagctccttgccactggagcccaa 48804640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 79 - 246
Target Start/End: Complemental strand, 13095982 - 13095815
Alignment:
Q  79 ttttttattcttgggtttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcc 178  Q
    |||||| || |||| ||| |||| |||||||| | ||| |||| ||  ||||||||| ||||| ||| ||||||||||||||||| ||||| ||||||||    
T  13095982 ttttttttttttggcttttgcaccggtttccgacccaccaaaggtgagcgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttcc 13095883  T
Q  179 tcctgggaatagaacccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaa 246  Q
     |||||||||||||||||||||| | ||| ||||||||||  |||||||||||||||| |||||||||    
T  13095882 ccctgggaatagaacccggtattccccgggtacgtccttgaaaggagctccttgccacgggagcccaa 13095815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 79 - 241
Target Start/End: Original strand, 10047861 - 10048023
Alignment:
Q  79 ttttttattcttgggtttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcc 178  Q
    |||||| || |||| |||||||| |||||||| | ||| || | ||||||||||||   |||| ||| ||||||| ||||||||| ||||| ||||||||    
T  10047861 ttttttttttttggctttcgcaccggtttccgacccaccaatggtggacgactaattctgctcatgcgtagaggcctgcgcactggccaagtgttgttcc 10047960  T
Q  179 tcctgggaatagaacccggtatttcacggatacgtccttggtaggagctccttgccaccggag 241  Q
     ||||||||| |||||||||||| | ||||||||||||||| |||||||||||||||| ||||    
T  10047961 ccctgggaatcgaacccggtattccccggatacgtccttggaaggagctccttgccactggag 10048023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 89 - 247
Target Start/End: Original strand, 17748377 - 17748535
Alignment:
Q  89 ttgggtttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaat 188  Q
    |||| |||||||  |||||||| | ||  |||| ||||||||||||| ||||||| | ||||||||||||||||| |||||||||||||| |||||||||    
T  17748377 ttggctttcgcatcggtttccgacccaacaaaggtggacgactaatccggctcgtacgtagaggcatgcgcactggccaagcgttgttccccctgggaat 17748476  T
Q  189 agaacccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaaa 247  Q
     |||||||||||| | || |||||||||||| || |||| ||||||||  |||||||||    
T  17748477 cgaacccggtattccccgaatacgtccttggaagaagctgcttgccactagagcccaaa 17748535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 129 - 246
Target Start/End: Complemental strand, 43925586 - 43925469
Alignment:
Q  129 actaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggagctc 228  Q
    |||||||  |||| ||| ||||||||||||||||||||||| |||||||| ||||||||| |||||||||||| | ||| ||||||||||| ||||||||    
T  43925586 actaatccagctcatgcgtagaggcatgcgcactgaccaagtgttgttccccctgggaatcgaacccggtattccccgggtacgtccttggaaggagctc 43925487  T
Q  229 cttgccaccggagcccaa 246  Q
    |||||||| |||||||||    
T  43925486 cttgccactggagcccaa 43925469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 79 - 246
Target Start/End: Original strand, 22993352 - 22993519
Alignment:
Q  79 ttttttattcttgggtttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcc 178  Q
    |||||| || |||| |||||||| |||||| | | ||| |||| ||  ||||||||| || |||||| ||||||||||| ||||| ||||||||||||||    
T  22993352 ttttttttttttggctttcgcaccggtttctgacccaccaaaggtgagcgactaatccggttcgtgcgtagaggcatgcacactggccaagcgttgttcc 22993451  T
Q  179 tcctgggaatagaacccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaa 246  Q
    |||| ||||| ||||||| |||| | ||| ||||||||||| |||||||||||||||| |||| ||||    
T  22993452 tcctcggaatcgaacccgatattccccgggtacgtccttggaaggagctccttgccactggagtccaa 22993519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 89 - 247
Target Start/End: Original strand, 5069810 - 5069968
Alignment:
Q  89 ttgggtttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaat 188  Q
    |||| |||||||  |||||||| | ||| |||| ||| ||||||||| |||| |||| ||||||||||| ||||  | |||||||||||||||||| |||    
T  5069810 ttggctttcgcatcggtttccgacccaccaaaggtgggcgactaatccggcttgtgcgtagaggcatgcacactagctaagcgttgttcctcctggaaat 5069909  T
Q  189 agaacccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaaa 247  Q
     |||||||||||||| ||| ||||||||| | || ||||||||||||| ||||||||||    
T  5069910 cgaacccggtatttcccgggtacgtccttagaagaagctccttgccactggagcccaaa 5069968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 94 - 247
Target Start/End: Complemental strand, 34659335 - 34659182
Alignment:
Q  94 tttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaac 193  Q
    |||||||| ||||| || ||||| || | ||| ||||||||| ||||||||| |||||||||||||||||  ||||||||||||| | || |||| ||||    
T  34659335 tttcgcaccggttttcgacacaccaatggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggtcaagcgttgttccccttgagaatcgaac 34659236  T
Q  194 ccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaaa 247  Q
    |||||||| | ||| ||| ||| ||| |||||||||||||||| ||||||||||    
T  34659235 ccggtattccccgggtacatccctggaaggagctccttgccactggagcccaaa 34659182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 94 - 247
Target Start/End: Original strand, 43346779 - 43346932
Alignment:
Q  94 tttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaac 193  Q
    ||||||||||||||||| | ||| |||||||  ||||||||| ||||||| | ||||||||||||||| | ||||| |||||||| | || |||| ||||    
T  43346779 tttcgcactggtttccgacccaccaaagatgagcgactaatccggctcgtacgtagaggcatgcgcaccggccaagtgttgttccccttgagaattgaac 43346878  T
Q  194 ccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaaa 247  Q
    |||||||| | | |||||||| |||| |||||||||||||||| |||| |||||    
T  43346879 ccggtattccccagatacgtctttggaaggagctccttgccactggagtccaaa 43346932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 123 - 246
Target Start/End: Original strand, 4195231 - 4195354
Alignment:
Q  123 tggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtag 222  Q
    |||||| |||||| ||||| ||| ||||||||||||||||  ||||  |||||||||||||| ||| |||| ||||||| | ||||||||||||||| ||    
T  4195231 tggacggctaatccggctcatgcgtagaggcatgcgcactagccaaatgttgttcctcctggaaatcgaactcggtattccccggatacgtccttggcag 4195330  T
Q  223 gagctccttgccaccggagcccaa 246  Q
    |||||||||||||| |||||||||    
T  4195331 gagctccttgccactggagcccaa 4195354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 94 - 247
Target Start/End: Original strand, 26423288 - 26423440
Alignment:
Q  94 tttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaac 193  Q
    |||||||| |||||||| | ||| |||| || |||||||||| ||||||||| |||||||| | |||||| |||||||||||| | ||||||||| ||||    
T  26423288 tttcgcaccggtttccgac-caccaaaggtgaacgactaatctggctcgtgcgtagaggcaggtgcactggccaagcgttgtttcccctgggaatcgaac 26423386  T
Q  194 ccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaaa 247  Q
    |||||||| |  || ||||||||||| ||||| | |||||||| ||||||||||    
T  26423387 ccggtattccttgggtacgtccttggaaggagtttcttgccactggagcccaaa 26423440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 94 - 219
Target Start/End: Original strand, 38578867 - 38578992
Alignment:
Q  94 tttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaac 193  Q
    |||||||| |||||||| | ||| |||| ||| ||||||||| ||||| ||| ||||||||||||||||| |||||||||||||| ||||||||| ||||    
T  38578867 tttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttccccctgggaatcgaac 38578966  T
Q  194 ccggtatttcacggatacgtccttgg 219  Q
    ||| |||| | ||| |||||||||||    
T  38578967 ccgatattccccgggtacgtccttgg 38578992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 138 - 246
Target Start/End: Complemental strand, 47341941 - 47341833
Alignment:
Q  138 gctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggagctccttgccacc 237  Q
    |||||||| ||||||||||||||||| ||||| |||||||| ||||||||| |||| ||||||| | ||| ||||||||||| | ||||||||||||||     
T  47341941 gctcgtgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaactcggtattccccgggtacgtccttggaatgagctccttgccact 47341842  T
Q  238 ggagcccaa 246  Q
    |||||||||    
T  47341841 ggagcccaa 47341833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 94 - 236
Target Start/End: Complemental strand, 39475049 - 39474906
Alignment:
Q  94 tttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaac 193  Q
    |||||||||||||| || | |||||||| ||||||||||||| ||||| ||| |||||| ||||||||||||||||||||||||| | | ||||| ||||    
T  39475049 tttcgcactggttttcgacccactaaaggtggacgactaatccggctcatgcgtagaggtatgcgcactgaccaagcgttgttccccataggaatcgaac 39474950  T
Q  194 ccggtat-ttcacggatacgtccttggtaggagctccttgccac 236  Q
    |||||||   | |||||||||| |||| | ||||||||| ||||    
T  39474949 ccggtatacccccggatacgtctttggaaagagctccttaccac 39474906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 127 - 245
Target Start/End: Complemental strand, 16802199 - 16802081
Alignment:
Q  127 cgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggagc 226  Q
    ||||||||| ||||||||| ||||||||| ||||||| |||| |||||||||||||  |||| ||| |||||||| | ||| ||||||||||| ||||||    
T  16802199 cgactaatccggctcgtgcgtagaggcatacgcactggccaatcgttgttcctcctaagaatcgaatccggtattccccgggtacgtccttggaaggagc 16802100  T
Q  227 tccttgccaccggagccca 245  Q
    || ||||||| ||||||||    
T  16802099 tcattgccactggagccca 16802081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 95 - 245
Target Start/End: Complemental strand, 18785777 - 18785627
Alignment:
Q  95 ttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacc 194  Q
    ||||||| |||||||| | ||| | || || ||||||||||  | || ||| ||||||||||||||||| ||||| |||||||| ||| ||||| |||||    
T  18785777 ttcgcaccggtttccgacccaccagaggtgaacgactaatccagttcatgcgtagaggcatgcgcactggccaagtgttgttccccctaggaatcgaacc 18785678  T
Q  195 cggtatttcacggatacgtccttggtaggagctccttgccaccggagccca 245  Q
    ||||||| | ||| ||||||||||| ||||||| |||||||| ||||||||    
T  18785677 cggtattccccgggtacgtccttggaaggagcttcttgccactggagccca 18785627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 129 - 246
Target Start/End: Complemental strand, 365214 - 365097
Alignment:
Q  129 actaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggagctc 228  Q
    ||||||||||||| ||| ||||||||||||||||||  ||||||||||||||||| |||| |||||||||||| | |||||||||  |||| ||||||||    
T  365214 actaatcaggctcatgcgtagaggcatgcgcactgattaagcgttgttcctcctgtgaatcgaacccggtattcctcggatacgtttttggaaggagctc 365115  T
Q  229 cttgccaccggagcccaa 246  Q
     || ||||  ||||||||    
T  365114 tttaccactagagcccaa 365097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 79 - 243
Target Start/End: Complemental strand, 21530872 - 21530708
Alignment:
Q  79 ttttttattcttgggtttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcc 178  Q
    |||||| || |||| ||||| || |||||||| | ||| |||| ||  ||| ||||  ||||||||| |||||||||| |||||||||||| ||||||||    
T  21530872 ttttttttttttggctttcgaaccggtttccgacccaccaaaggtgagcgattaattcggctcgtgcgtagaggcatgtgcactgaccaagtgttgttcc 21530773  T
Q  179 tcctgggaatagaacccggtatttcacggatacgtccttggtaggagctccttgccaccggagcc 243  Q
     |||||||||  ||||| ||||| | | | ||||||||||| |||||||||||||||| ||||||    
T  21530772 ccctgggaatcaaacccagtattccccaggtacgtccttggaaggagctccttgccactggagcc 21530708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 121 - 228
Target Start/End: Original strand, 21190807 - 21190914
Alignment:
Q  121 gatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggt 220  Q
    ||||| ||||||||| | ||||||| ||||||||||||||||  |||||||||| ||||||| ||||| |||||||||||| | |||||| ||||||||     
T  21190807 gatgggcgactaatctgactcgtgcgtagaggcatgcgcactagccaagcgttgctcctcctaggaatcgaacccggtattccccggataagtccttgga 21190906  T
Q  221 aggagctc 228  Q
    ||||||||    
T  21190907 aggagctc 21190914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 128 - 247
Target Start/End: Original strand, 43862006 - 43862125
Alignment:
Q  128 gactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggagct 227  Q
    |||||||| ||||| ||| ||||||||||||||||| |||| ||||||||| ||||||||| |||||||||||| | | |||||||| |||| | |||||    
T  43862006 gactaatccggctcatgcgtagaggcatgcgcactggccaaacgttgttccccctgggaatcgaacccggtattccccagatacgtctttggaaagagct 43862105  T
Q  228 ccttgccaccggagcccaaa 247  Q
    ||||||| |  |||||||||    
T  43862106 ccttgccgctagagcccaaa 43862125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 89 - 235
Target Start/End: Complemental strand, 22974081 - 22973935
Alignment:
Q  89 ttgggtttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaat 188  Q
    |||| |||||| | |||||| | | ||| |||| ||||||||||||| ||||| ||| |||| |||||| ||||| |||||||||||||| |||| ||||    
T  22974081 ttggctttcgcgccggtttctgacccaccaaaggtggacgactaatctggctcatgcgtagacgcatgcacactggccaagcgttgttccccctgagaat 22973982  T
Q  189 agaacccggtatttcacggatacgtccttggtaggagctccttgcca 235  Q
     |||||||||||| | ||  ||||||||||| |||||||||| ||||    
T  22973981 cgaacccggtattccccgagtacgtccttggaaggagctcctcgcca 22973935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 89 - 247
Target Start/End: Complemental strand, 23658293 - 23658136
Alignment:
Q  89 ttgggtttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaat 188  Q
    |||| ||| |||| |||||| | | ||| |||||||||||||||||| ||||||||  ||||||||||| ||||| |||||||||||||| ||||| |||    
T  23658293 ttggcttttgcacaggtttctgacccaccaaagatggacgactaatccggctcgtgtgtagaggcatgcacactggccaagcgttgttccccctggaaat 23658194  T
Q  189 agaacccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaaa 247  Q
     ||||  | |||| |  || ||||||||| | |||||||||||||||| ||||||||||    
T  23658193 cgaactggatattccctgggtacgtcctt-gaaggagctccttgccactggagcccaaa 23658136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 94 - 247
Target Start/End: Complemental strand, 27028388 - 27028235
Alignment:
Q  94 tttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaac 193  Q
    |||||||| |||||||| | ||| |||| ||  |||||||||  |||| ||  ||||||||||||||||| ||||| |||||||| ||||| ||| ||||    
T  27028388 tttcgcaccggtttccgacccaccaaaggtgagcgactaatccagctcatgtgtagaggcatgcgcactggccaagtgttgttccccctggaaatcgaac 27028289  T
Q  194 ccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaaa 247  Q
    | |||||||| | | ||||| ||||| | ||||||||||||||||||| |||||    
T  27028288 ctggtatttcccaggtacgttcttggaatgagctccttgccaccggagtccaaa 27028235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 94 - 247
Target Start/End: Original strand, 27875088 - 27875240
Alignment:
Q  94 tttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaac 193  Q
    |||||||| ||||| || | |||||||| ||||||||||||  | ||| ||| |||||||||| |||||| ||||| ||| |||| ||||||||| |||     
T  27875088 tttcgcaccggttttcgacccactaaaggtggacgactaatgcgactcatgcgtagaggcatgtgcactggccaagtgttattccccctgggaatcgaat 27875187  T
Q  194 ccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaaa 247  Q
    |||||||| | | ||||||| ||||| ||||||| |||||||| ||||||||||    
T  27875188 ccggtattccccagatacgt-cttggaaggagctacttgccactggagcccaaa 27875240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 127 - 247
Target Start/End: Original strand, 5039451 - 5039571
Alignment:
Q  127 cgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggagc 226  Q
    ||||||||| ||||| ||| |||||| ||| |||||||||||| |||||||||||| ||||| |||| ||||||| | || |||| ||  ||| ||||||    
T  5039451 cgactaatccggctcatgcgtagaggtatgtgcactgaccaagtgttgttcctcctaggaatcgaactcggtattccccgaatacatctatggaaggagc 5039550  T
Q  227 tccttgccaccggagcccaaa 247  Q
    |||||||||| ||||||||||    
T  5039551 tccttgccactggagcccaaa 5039571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 89 - 232
Target Start/End: Complemental strand, 1606055 - 1605912
Alignment:
Q  89 ttgggtttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaat 188  Q
    |||| |||||||| ||||||||   ||| |||| ||| ||||||||| |||||  || |||||||||| |||||| |||||||||||||| ||||| |||    
T  1606055 ttggctttcgcaccggtttccgatccaccaaaggtgggcgactaatccggctcaagcctagaggcatgtgcactggccaagcgttgttccccctggaaat 1605956  T
Q  189 agaacccggtatttcacggatacgtccttggtaggagctccttg 232  Q
     ||||| ||||||   ||| ||||||||||| ||||||||||||    
T  1605955 cgaaccaggtattctccgggtacgtccttggaaggagctccttg 1605912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 131 - 241
Target Start/End: Original strand, 42210299 - 42210409
Alignment:
Q  131 taatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggagctcct 230  Q
    ||||| ||||||||| ||||||||||||||||| |||| |||||||    |||||||| ||| |||||||| | ||||||||||||||| | ||||||||    
T  42210299 taatccggctcgtgcgtagaggcatgcgcactggccaaacgttgttttcactgggaatcgaagccggtattcctcggatacgtccttggaaagagctcct 42210398  T
Q  231 tgccaccggag 241  Q
    |||||| ||||    
T  42210399 tgccactggag 42210409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 137 - 247
Target Start/End: Complemental strand, 46414741 - 46414631
Alignment:
Q  137 ggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggagctccttgccac 236  Q
    ||||||||| |||||||||||||| || ||||||||| ||| ||||| |||| ||||  |||||| ||||| |||||||||   ||||||||||||||||    
T  46414741 ggctcgtgcgtagaggcatgcgcattggccaagcgttattcatcctgagaatcgaacttggtattccacgggtacgtccttaaaaggagctccttgccac 46414642  T
Q  237 cggagcccaaa 247  Q
     ||||||||||    
T  46414641 gggagcccaaa 46414631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 123 - 236
Target Start/End: Original strand, 36619283 - 36619396
Alignment:
Q  123 tggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtag 222  Q
    ||||||||||||| ||||| ||| ||||||||||| |||||  |||| |||||||| ||||||||| |||||||||||| | |  |||||||||||  ||    
T  36619283 tggacgactaatccggctcatgcgtagaggcatgcacactggacaagtgttgttccccctgggaatcgaacccggtattccccaaatacgtccttgcaag 36619382  T
Q  223 gagctccttgccac 236  Q
    ||| ||||||||||    
T  36619383 gagttccttgccac 36619396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 103 - 236
Target Start/End: Complemental strand, 45448070 - 45447937
Alignment:
Q  103 ggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtattt 202  Q
    |||||||| | |||||||| |||  |||||||| | || |||  |||||| |||||||||  |||||||||||||  ||||| ||| ||||| |||||||    
T  45448070 ggtttccgacccactaaaggtgggtgactaatctgactagtgtgtagagggatgcgcactagccaagcgttgttctccctggaaatcgaacctggtattt 45447971  T
Q  203 cacggatacgtccttggtaggagctccttgccac 236  Q
    | ||| ||||||||||| ||||||||||||||||    
T  45447970 ctcgggtacgtccttggaaggagctccttgccac 45447937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 118 - 246
Target Start/End: Original strand, 19914727 - 19914854
Alignment:
Q  118 aaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtcctt 217  Q
    |||| ||| ||| ||||| ||||| ||| |||||||||||||| || |||||||||||||||  ||||||| |||||| ||||| |   | |||||||||    
T  19914727 aaaggtgggcgattaatctggctcatgcgtagaggcatgcgcattggccaagcgttgttcct-ttgggaatcgaacccagtattccttaggtacgtcctt 19914825  T
Q  218 ggtaggagctccttgccaccggagcccaa 246  Q
    || |||||||||||||||| |||||||||    
T  19914826 ggaaggagctccttgccactggagcccaa 19914854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 78 - 246
Target Start/End: Complemental strand, 39420962 - 39420795
Alignment:
Q  78 gttttttattcttgggtttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttc 177  Q
    ||||||| || |||| ||| |||| |||||||||| ||  |||| | ||||||||||| ||||| ||| |||||||| |||||||| |||||||||||||    
T  39420962 gttttttttttttggcttttgcaccggtttccggcccatcaaaggtagacgactaatccggctcatgcgtagaggcacgcgcactggccaagcgttgttc 39420863  T
Q  178 ctcctgggaatagaacccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaa 246  Q
    |   ||||| | ||| |||||||| | ||| ||| ||||||  ||||||||||||||||  ||||||||    
T  39420862 cctttgggattcgaa-ccggtattccccgggtacctccttgaaaggagctccttgccactagagcccaa 39420795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 127 - 247
Target Start/End: Original strand, 4228787 - 4228904
Alignment:
Q  127 cgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggagc 226  Q
    ||||||||| ||||| ||| ||| |||||| |||||| |||| ||||||||||   || ||| ||||| |||||| | ||||||||||||||| ||||||    
T  4228787 cgactaatccggctcatgcgtaggggcatgtgcactggccaaacgttgttcct---ggaaatcgaacctggtattcctcggatacgtccttggaaggagc 4228883  T
Q  227 tccttgccaccggagcccaaa 247  Q
    |||||||| | ||||||||||    
T  4228884 tccttgccgctggagcccaaa 4228904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 94 - 236
Target Start/End: Original strand, 8734686 - 8734828
Alignment:
Q  94 tttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaac 193  Q
    |||||||| |||||||| | ||| |||| ||| ||||||||| ||||||||| | ||||||||||||||| |||||| ||||||| ||  | ||| ||||    
T  8734686 tttcgcaccggtttccgacccaccaaaggtgggcgactaatctggctcgtgcgttgaggcatgcgcactgcccaagcattgttcccccaagaaatcgaac 8734785  T
Q  194 ccggtatttcacggatacgtccttggtaggagctccttgccac 236  Q
    | | |||| |   |||| |||||||| ||||||||||||||||    
T  8734786 ctgatattcccgagatatgtccttggaaggagctccttgccac 8734828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 171 - 247
Target Start/End: Complemental strand, 9685771 - 9685695
Alignment:
Q  171 gttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaaa 247  Q
    ||||||||||||| |||| ||||||| |||| | ||||||||| ||||| |||||||||||||||| ||||||||||    
T  9685771 gttgttcctcctgagaatcgaacccgatattccccggatacgtgcttggaaggagctccttgccactggagcccaaa 9685695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 94 - 178
Target Start/End: Complemental strand, 41945582 - 41945498
Alignment:
Q  94 tttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcc 178  Q
    |||||||| | |||||| | ||| |||| ||||||||||||| ||||||||| ||||||||||||||||| ||||||||| ||||    
T  41945582 tttcgcaccgatttccgactcaccaaaggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttattcc 41945498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 153 - 247
Target Start/End: Original strand, 22268088 - 22268182
Alignment:
Q  153 catgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaaa 247  Q
    ||||||||||| ||||  |||||||| ||||||||| |||||||||||| | |   ||||||||||| | |||||||||||||| ||||||||||    
T  22268088 catgcgcactggccaaatgttgttccccctgggaatcgaacccggtattccccaagtacgtccttggaatgagctccttgccactggagcccaaa 22268182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 94 - 232
Target Start/End: Complemental strand, 37515030 - 37514892
Alignment:
Q  94 tttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaac 193  Q
    |||| ||| |||||||| | |||||| | || |||| ||||| ||||||||| ||||| |||||||||||||||| |||||||||  |||  ||| ||||    
T  37515030 tttcacaccggtttccgacccactaatggtgaacgattaatccggctcgtgcgtagagacatgcgcactgaccaaacgttgttcccactgaaaatcgaac 37514931  T
Q  194 ccggtatttcacggatacgtccttggtaggagctccttg 232  Q
    || ||||| | ||| || |||||||| ||||||| ||||    
T  37514930 ccagtattccccgggtatgtccttggaaggagctacttg 37514892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 236
Target Start/End: Complemental strand, 14650393 - 14650284
Alignment:
Q  127 cgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggagc 226  Q
    ||||||| | ||||| ||| |||||||||  ||||||  ||||| ||||||||||||| ||| ||||||| ||||   ||| ||||||||||| ||||||    
T  14650393 cgactaacccggctcatgcgtagaggcatatgcactggtcaagcattgttcctcctggaaatcgaacccgatattctccgggtacgtccttggaaggagc 14650294  T
Q  227 tccttgccac 236  Q
    ||||||||||    
T  14650293 tccttgccac 14650284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 94 - 247
Target Start/End: Original strand, 29805440 - 29805592
Alignment:
Q  94 tttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaac 193  Q
    ||||||||||||||||| | |||||||| | ||||| ||||  ||||| ||| ||||| |||||||||||||||| ||||||||| | |  |||| ||||    
T  29805440 tttcgcactggtttccgactcactaaaggtagacgattaatttggctcatgcgtagagacatgcgcactgaccaaacgttgttcc-catatgaatcgaac 29805538  T
Q  194 ccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaaa 247  Q
     |||||||   || |||||||||||  |||| |||||| |||| |||| |||||    
T  29805539 tcggtattctccgaatacgtccttgaaaggatctccttaccactggagtccaaa 29805592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 169 - 246
Target Start/End: Original strand, 34127695 - 34127772
Alignment:
Q  169 gcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaa 246  Q
    |||||||||||||| ||||| |||||||||||| | ||| ||||||||||| ||||| |||||||||  |||||||||    
T  34127695 gcgttgttcctcctcggaatcgaacccggtattccccgggtacgtccttggaaggagttccttgccattggagcccaa 34127772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 118 - 247
Target Start/End: Complemental strand, 42032181 - 42032052
Alignment:
Q  118 aaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtcctt 217  Q
    |||| ||||| ||||||  ||||| ||| |||| | ||| |||||| |||| ||||||||| | ||||||| ||||| |||||| | ||| |||||||||    
T  42032181 aaaggtggacaactaattcggctcatgcgtagatgtatgtgcactggccaaacgttgttccccgtgggaatcgaaccaggtattccccgggtacgtcctt 42032082  T
Q  218 ggtaggagctccttgccaccggagcccaaa 247  Q
    || ||||||| ||||| || ||||||||||    
T  42032081 ggaaggagcttcttgctactggagcccaaa 42032052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 127 - 247
Target Start/End: Original strand, 45960036 - 45960155
Alignment:
Q  127 cgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggagc 226  Q
    ||||||||| ||||  ||| ||||||||||||||||||||||| |||||| | | |||||||  ||| ||||| ||| | ||||||||||||| | ||||    
T  45960036 cgactaatccggcttatgcgtagaggcatgcgcactgaccaagtgttgttgcccttgggaatcaaactcggta-ttccccgatacgtccttggaaagagc 45960134  T
Q  227 tccttgccaccggagcccaaa 247  Q
    ||||||| || ||||| ||||    
T  45960135 tccttgctactggagctcaaa 45960155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 129 - 201
Target Start/End: Original strand, 49142704 - 49142776
Alignment:
Q  129 actaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatt 201  Q
    ||||||| ||||||||| |||||||||| |||||| | |||||||||||| ||| ||||| ||||||||||||    
T  49142704 actaatccggctcgtgcgtagaggcatgtgcactggctaagcgttgttccccctaggaatcgaacccggtatt 49142776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 103 - 218
Target Start/End: Original strand, 28396169 - 28396284
Alignment:
Q  103 ggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtattt 202  Q
    |||||||| | ||| |||| | ||||||||||| ||||| ||| || ||||||||||||   | |||||||||||| |||| |||| ||||||| |||||    
T  28396169 ggtttccgacccaccaaaggtagacgactaatccggctcatgcgtaaaggcatgcgcaccagctaagcgttgttccccctgagaattgaacccgatattt 28396268  T
Q  203 cacggatacgtccttg 218  Q
    | ||||||||| ||||    
T  28396269 cccggatacgttcttg 28396284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 143 - 201
Target Start/End: Original strand, 10317794 - 10317852
Alignment:
Q  143 tgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatt 201  Q
    ||||||||||||| ||||||||||||| ||| |||| ||||||||| ||||||||||||    
T  10317794 tgcatagaggcatacgcactgaccaagtgttattccccctgggaatcgaacccggtatt 10317852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 118 - 247
Target Start/End: Original strand, 4706008 - 4706137
Alignment:
Q  118 aaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtcctt 217  Q
    |||| |||||||||||||  |||||||| |||| ||||||| | || | || ||||||||| |||   ||| |||||  |||||||   |||||||| ||    
T  4706008 aaaggtggacgactaatccagctcgtgcgtagaagcatgcgtaatggctaaacgttgttccccctaaaaatcgaaccatgtatttcctagatacgtcatt 4706107  T
Q  218 ggtaggagctccttgccaccggagcccaaa 247  Q
    || ||||||||||||||||||||| |||||    
T  4706108 ggaaggagctccttgccaccggagtccaaa 4706137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 118 - 247
Target Start/End: Original strand, 4973134 - 4973263
Alignment:
Q  118 aaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtcctt 217  Q
    |||| ||||||||||||| ||||||| | |||||||||||||| ||  |||| ||| |||| | | ||||| ||||||| |||| | || ||| ||||||    
T  4973134 aaagctggacgactaatccggctcgtacgtagaggcatgcgcattggtcaagtgttattccccgtaggaatcgaacccgatattccccgaataagtcctt 4973233  T
Q  218 ggtaggagctccttgccaccggagcccaaa 247  Q
    || || ||||||||| ||  ||||||||||    
T  4973234 ggaagaagctccttgtcagtggagcccaaa 4973263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 147 - 247
Target Start/End: Original strand, 24969379 - 24969477
Alignment:
Q  147 tagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaa 246  Q
    |||||||| |||||||| ||||| ||||||||  |||| ||| |||||||||||||  | ||||||||||||  |  ||||||||||||| |||||||||    
T  24969379 tagaggcacgcgcactggccaagtgttgttcc--ctggaaatcgaacccggtattttccagatacgtccttgaaaaaagctccttgccactggagcccaa 24969476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 125 - 201
Target Start/End: Complemental strand, 29152018 - 29151942
Alignment:
Q  125 gacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatt 201  Q
    ||||| ||||| || |||||  |||||||||||||||||  ||| |||||||| |||||||||| ||||||||||||    
T  29152018 gacgattaatccggatcgtgtgtagaggcatgcgcactggtcaaacgttgttcttcctgggaatcgaacccggtatt 29151942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 118 - 168
Target Start/End: Complemental strand, 3353509 - 3353459
Alignment:
Q  118 aaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaa 168  Q
    |||| ||||||||||||| ||||||||| ||||||||||||||||| ||||    
T  3353509 aaaggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaa 3353459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 247
Target Start/End: Complemental strand, 14535367 - 14535247
Alignment:
Q  127 cgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacgga-tacgtccttggtaggag 225  Q
    |||||||||  |||||||| ||||||||||| ||||| ||||| |||||||  ||||  |||  ||||||||| ||| |||| ||||||||||| |||||    
T  14535367 cgactaatccagctcgtgcgtagaggcatgcacactggccaagtgttgttctccctgaaaatgaaacccggta-ttcccggagtacgtccttggaaggag 14535269  T
Q  226 ctccttgccaccggagcccaaa 247  Q
     || ||||||  ||||||||||    
T  14535268 ttctttgccattggagcccaaa 14535247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 236
Target Start/End: Complemental strand, 44336957 - 44336860
Alignment:
Q  139 ctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggagctccttgccac 236  Q
    ||||||| |||||||||||||||||||||| |||| ||  |||||| ||| |||| || |||| |   ||||||||||||| | |||||| |||||||    
T  44336957 ctcgtgcgtagaggcatgcgcactgaccaaacgttatttttcctggaaatcgaactcgatattccctagatacgtccttggaatgagctctttgccac 44336860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 125 - 177
Target Start/End: Complemental strand, 30827370 - 30827318
Alignment:
Q  125 gacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttc 177  Q
    ||||||||||| ||||||||| |||||||||||| |||| ||||| |||||||    
T  30827370 gacgactaatccggctcgtgcgtagaggcatgcgtactggccaagtgttgttc 30827318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 178
Target Start/End: Original strand, 45697190 - 45697274
Alignment:
Q  94 tttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcc 178  Q
    ||||| ||||||||||| | ||| |||| ||||||||||| |   ||| ||| |||||||||||||||||| |||| ||||||||    
T  45697190 tttcgtactggtttccgacccaccaaaggtggacgactaacccaactcatgcgtagaggcatgcgcactgatcaagtgttgttcc 45697274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 187
Target Start/End: Complemental strand, 28744285 - 28744178
Alignment:
Q  80 tttttattcttgggtttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcct 179  Q
    ||||| || |||| ||||||||  ||||||| | ||| |||| ||||||||||||| |||||||   |||||| ||||| |||| |||||| |||||||     
T  28744285 tttttttttttggctttcgcaccagtttccgacccaccaaaggtggacgactaatccggctcgtatgtagaggtatgcgtactggccaagcattgttccc 28744186  T
Q  180 cctgggaa 187  Q
    ||| ||||    
T  28744185 cctaggaa 28744178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 214
Target Start/End: Original strand, 34865910 - 34865997
Alignment:
Q  127 cgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtc 214  Q
    ||||||||| |||||||||||||||||||| ||||||| |||| ||| ||  || | ||||| |||  || |||||| ||||||||||    
T  34865910 cgactaatctggctcgtgcatagaggcatgtgcactgatcaagtgttatttttcttaggaattgaattcgatatttctcggatacgtc 34865997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 80 - 218
Target Start/End: Original strand, 48244342 - 48244480
Alignment:
Q  80 tttttattcttgggtttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcct 179  Q
    |||||||| |||| |||||||| ||||| ||   ||| |||| ||  ||||||||| ||||| ||| ||||||||  |||||||| ||||| |||||||     
T  48244342 tttttatttttggctttcgcaccggttttcgatccaccaaaggtgagcgactaatccggctcatgcgtagaggcaaacgcactgatcaagcattgttccc 48244441  T
Q  180 cctgggaatagaacccggtatttcacggatacgtccttg 218  Q
    | | | ||| |||||||||||| | |  |||||||||||    
T  48244442 cttagaaattgaacccggtattccccaaatacgtccttg 48244480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 177
Target Start/End: Complemental strand, 48551980 - 48551883
Alignment:
Q  80 tttttattcttgggtttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttc 177  Q
    ||||| || |||| |||||||| ||||||||   ||  |||| ||||||||||||| ||||| | | |||||||||||||| || |||| ||||||||    
T  48551980 tttttgtttttggctttcgcaccggtttccgatccatcaaaggtggacgactaatccggctcatacgtagaggcatgcgcattggccaaccgttgttc 48551883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 81; Significance: 1e-37; HSPs: 78)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 94 - 246
Target Start/End: Complemental strand, 29895898 - 29895746
Alignment:
Q  94 tttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaac 193  Q
    |||||||| ||||||||   ||| || | ||||||||||||| ||||| ||| ||||||||||||||||| ||||| |||||||| ||||||||| ||||    
T  29895898 tttcgcaccggtttccgaaccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaac 29895799  T
Q  194 ccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaa 246  Q
    |||||||| | ||||||||||||||| |||||||||||||||| |||||||||    
T  29895798 ccggtattccccggatacgtccttggaaggagctccttgccactggagcccaa 29895746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 94 - 230
Target Start/End: Original strand, 42722577 - 42722713
Alignment:
Q  94 tttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaac 193  Q
    |||||||| ||||| || | |||||||| || |||||||||| ||||| ||| ||||||||||||||||| |||||||||||||||||||||||| ||||    
T  42722577 tttcgcaccggttttcgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttcctcctgggaattgaac 42722676  T
Q  194 ccggtatttcacggatacgtccttggtaggagctcct 230  Q
    |||||||||| ||| ||||||||||| ||||||||||    
T  42722677 ccggtatttcccgggtacgtccttggaaggagctcct 42722713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 123 - 246
Target Start/End: Complemental strand, 1446908 - 1446785
Alignment:
Q  123 tggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtag 222  Q
    ||||||||||||| ||||| ||| ||||||||||||||||| ||||| |||||||| ||||||||| |||||||||||| | ||||||||||||||| ||    
T  1446908 tggacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaacccggtattccccggatacgtccttggaag 1446809  T
Q  223 gagctccttgccaccggagcccaa 246  Q
    |||||||||||||| |||||||||    
T  1446808 gagctccttgccactggagcccaa 1446785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 80 - 247
Target Start/End: Complemental strand, 53599185 - 53599018
Alignment:
Q  80 tttttattcttgggtttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcct 179  Q
    ||||| || |||| |||||||| ||||||||   |||||||| || |||| ||||| ||||| ||| ||||||||||||||||| |||| ||||||||||    
T  53599185 tttttttttttggctttcgcaccggtttccgatccactaaaggtgaacgattaatccggctcatgcgtagaggcatgcgcactggccaaacgttgttcct 53599086  T
Q  180 cctgggaatagaacccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaaa 247  Q
    ||||||||| |||||||||||| | ||| ||||||||||| |||||||||||||||  ||||||||||    
T  53599085 cctgggaatcgaacccggtattccccgggtacgtccttggaaggagctccttgccaatggagcccaaa 53599018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 94 - 247
Target Start/End: Complemental strand, 38166138 - 38165985
Alignment:
Q  94 tttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaac 193  Q
    |||||||| |||||||| | ||| |||| ||| ||||||||| ||||||||| ||||| ||||||||||| |||||||||||||| |||||||||  |||    
T  38166138 tttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagagccatgcgcactggccaagcgttgttccccctgggaatccaac 38166039  T
Q  194 ccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaaa 247  Q
    || ||||| | ||||||||||||||| |||||||||||||||  ||||||||||    
T  38166038 ccagtattccccggatacgtccttggaaggagctccttgccagtggagcccaaa 38165985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 94 - 246
Target Start/End: Complemental strand, 47078569 - 47078417
Alignment:
Q  94 tttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaac 193  Q
    ||||||||||||||||| | ||| || | ||  ||||||||| ||||||||| |||||||||| |||||| |||||||||||||| ||||||||| ||||    
T  47078569 tttcgcactggtttccgacccaccaatggtgagcgactaatccggctcgtgcgtagaggcatgtgcactggccaagcgttgttccccctgggaatcgaac 47078470  T
Q  194 ccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaa 246  Q
    |||||||| | ||| ||||||||||| |||||||||||||||| ||| |||||    
T  47078469 ccggtattccccgggtacgtccttggaaggagctccttgccactggaacccaa 47078417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 79 - 241
Target Start/End: Original strand, 36145200 - 36145362
Alignment:
Q  79 ttttttattcttgggtttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcc 178  Q
    |||||| || |||| |||||||| ||||||||   ||  |||| ||||||||||||| ||||| ||  |||||||||||||||||| ||||||||||| |    
T  36145200 ttttttttttttggctttcgcaccggtttccgattcatcaaaggtggacgactaatccggctcatgtgtagaggcatgcgcactgatcaagcgttgtttc 36145299  T
Q  179 tcctgggaatagaacccggtatttcacggatacgtccttggtaggagctccttgccaccggag 241  Q
     ||||||||| |||||||||||| | ||| ||||||||||| | |||||||||||||||||||    
T  36145300 ccctgggaatcgaacccggtattccccgggtacgtccttggaatgagctccttgccaccggag 36145362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 96 - 247
Target Start/End: Original strand, 1940779 - 1940927
Alignment:
Q  96 tcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaaccc 195  Q
    |||||| ||||| || | ||| |||| ||| ||||||||| ||||||||| |||||||||||||||   |||||||||||||| ||||||||| ||||||    
T  1940779 tcgcaccggttttcgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcac---ccaagcgttgttccccctgggaatcgaaccc 1940875  T
Q  196 ggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaaa 247  Q
    | |||||| ||| ||||||||||| ||||||||||||||||  |||||||||    
T  1940876 gatatttcccgggtacgtccttggaaggagctccttgccactagagcccaaa 1940927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 94 - 247
Target Start/End: Complemental strand, 2559418 - 2559265
Alignment:
Q  94 tttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaac 193  Q
    |||||||| |||||||| | ||| |||| ||||||| ||||| |||| |||| ||||||||||||||||| |||||||||||||||||| | ||| |||     
T  2559418 tttcgcaccggtttccgacccaccaaaggtggacgagtaatccggcttgtgcgtagaggcatgcgcactggccaagcgttgttcctcctagaaatcgaat 2559319  T
Q  194 ccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaaa 247  Q
    |||||||| | | | ||||||||||| |||||||| ||||||| ||||||||||    
T  2559318 ccggtattccccaggtacgtccttggaaggagctcgttgccactggagcccaaa 2559265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 94 - 246
Target Start/End: Complemental strand, 55921145 - 55920993
Alignment:
Q  94 tttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaac 193  Q
    |||||||| |||||||| | ||| |||| ||  ||| ||||| ||||| | | ||||||||||||||||||||||| |||||||| ||||||||| ||||    
T  55921145 tttcgcaccggtttccgacccaccaaaggtgagcgattaatccggctcatacgtagaggcatgcgcactgaccaagtgttgttccccctgggaatcgaac 55921046  T
Q  194 ccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaa 246  Q
    |||||||| | ||| | ||||||||| |||||||||||||||| |||||||||    
T  55921045 ccggtattccccgggtgcgtccttggaaggagctccttgccactggagcccaa 55920993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 94 - 245
Target Start/End: Original strand, 40780861 - 40781012
Alignment:
Q  94 tttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaac 193  Q
    |||||||| |||||||| | ||| |||| ||||||||||||| ||||| ||| |||||||||||||||||||||||||||||||| | || |||| ||||    
T  40780861 tttcgcaccggtttccgacccaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactgaccaagcgttgttccccttgagaatcgaac 40780960  T
Q  194 ccggtatttcacggatacgtccttggtaggagctccttgccaccggagccca 245  Q
    ||| |||||  || ||||||||||   || ||||||||||||| ||||||||    
T  40780961 ccgatattttccgaatacgtccttaaaagaagctccttgccactggagccca 40781012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 118 - 247
Target Start/End: Complemental strand, 6779298 - 6779169
Alignment:
Q  118 aaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtcctt 217  Q
    |||| ||||||||||||| ||||| ||||||||||||||||||||| ||| | |||||||| ||||||||| ||||||||||||   | | |||||||||    
T  6779298 aaaggtggacgactaatccggctcatgcatagaggcatgcgcactggccaggtgttgttccccctgggaatcgaacccggtattctccaggtacgtcctt 6779199  T
Q  218 ggtaggagctccttgccaccggagcccaaa 247  Q
    || || ||||||||||||| ||||||||||    
T  6779198 ggaagaagctccttgccactggagcccaaa 6779169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 118 - 246
Target Start/End: Complemental strand, 27248513 - 27248387
Alignment:
Q  118 aaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtcctt 217  Q
    |||| ||| ||||||||| ||||| ||| |||||||||||||  || |||||||||||||||||||||| | |||||||||||| | |||||||||||||    
T  27248513 aaaggtgggcgactaatctggctcctgcgtagaggcatgcgc--tggccaagcgttgttcctcctgggactcgaacccggtattccccggatacgtcctt 27248416  T
Q  218 ggtaggagctccttgccaccggagcccaa 246  Q
    || |||||||| ||||||| |||||||||    
T  27248415 ggaaggagctcgttgccactggagcccaa 27248387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 103 - 247
Target Start/End: Complemental strand, 8889124 - 8888980
Alignment:
Q  103 ggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtattt 202  Q
    |||||||| | ||| |||| ||||||||||||| ||||| ||| ||||| ||||||||||| ||||| |||||||| ||| ||||| ||||||||||||     
T  8889124 ggtttccgacccaccaaaggtggacgactaatccggctcatgcgtagagccatgcgcactgcccaagtgttgttccccctaggaatcgaacccggtattc 8889025  T
Q  203 cacggatacgtccttggtaggagctccttgccaccggagcccaaa 247  Q
    | ||||||||||||| | |||||||||||||| |  |||||||||    
T  8889024 cccggatacgtccttagaaggagctccttgccgctagagcccaaa 8888980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 89 - 235
Target Start/End: Complemental strand, 38168372 - 38168227
Alignment:
Q  89 ttgggtttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaat 188  Q
    |||| |||||||| |||||||  | |||||||| || |||||||||| ||||| ||| |||||||||| |||||| |||||||||||||||| | |||||    
T  38168372 ttggctttcgcaccggtttccaacccactaaaggtgaacgactaatccggctcatgcgtagaggcatg-gcactggccaagcgttgttcctcttaggaat 38168274  T
Q  189 agaacccggtatttcacggatacgtccttggtaggagctccttgcca 235  Q
     ||||| |||||| | ||| ||||||||||| |||||||||||||||    
T  38168273 cgaacctggtattccccgggtacgtccttggaaggagctccttgcca 38168227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 118 - 247
Target Start/End: Original strand, 5472872 - 5473001
Alignment:
Q  118 aaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtcctt 217  Q
    |||| ||| ||||||||| ||||||||| ||||||||||||||||| |||||||||||| | |||| ||||  |||| |||||| | |||||||||||||    
T  5472872 aaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgtttcccctgagaatcaaacctggtattccccggatacgtcctt 5472971  T
Q  218 ggtaggagctccttgccaccggagcccaaa 247  Q
    |  | |||||||||||||| ||||||||||    
T  5472972 gaaatgagctccttgccactggagcccaaa 5473001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 94 - 247
Target Start/End: Complemental strand, 52950193 - 52950040
Alignment:
Q  94 tttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaac 193  Q
    |||||||  |||||||| | ||| |||| ||||||||||||| || || ||  ||||| ||||||||||| |||||||||||||| ||||||||| ||||    
T  52950193 tttcgcatcggtttccgacccaccaaaggtggacgactaatctggttcatgtgtagagtcatgcgcactggccaagcgttgttccccctgggaatcgaac 52950094  T
Q  194 ccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaaa 247  Q
    ||| |||| | | | ||||||||||| ||||||||||||||||  |||||||||    
T  52950093 ccgatattccccaggtacgtccttggaaggagctccttgccactagagcccaaa 52950040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 118 - 246
Target Start/End: Complemental strand, 43458700 - 43458572
Alignment:
Q  118 aaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtcctt 217  Q
    |||| ||||||||||||| ||||||| | ||||||||||||||||| ||||||||| |||||||||||||| ||| || ||||| | |  ||||||||||    
T  43458700 aaaggtggacgactaatccggctcgtccgtagaggcatgcgcactggccaagcgttcttcctcctgggaatcgaatccagtattccccaaatacgtcctt 43458601  T
Q  218 ggtaggagctccttgccaccggagcccaa 246  Q
    || | ||||| |||||||| |||||||||    
T  43458600 ggaatgagcttcttgccactggagcccaa 43458572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 80 - 242
Target Start/End: Original strand, 36262753 - 36262913
Alignment:
Q  80 tttttattcttgggtttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcct 179  Q
    ||||| || |||| ||||||| ||||||| | | ||| |||| ||| ||||||||| | ||||||| |||||||||| |||||| |||||||||||||      
T  36262753 tttttttttttggctttcgcattggtttctgacccaccaaaggtgggcgactaatccgactcgtgcgtagaggcatgtgcactggccaagcgttgttc-- 36262850  T
Q  180 cctgggaatagaacccggtatttcacggatacgtccttggtaggagctccttgccaccggagc 242  Q
    ||||||||| ||||||||||||   ||| ||||||||||| ||||||| |||||||| |||||    
T  36262851 cctgggaatcgaacccggtattctccgggtacgtccttggaaggagcttcttgccactggagc 36262913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 128 - 246
Target Start/End: Complemental strand, 24166527 - 24166409
Alignment:
Q  128 gactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggagct 227  Q
    |||||||| ||||||||| ||||||||||||||||| |||| ||||||| | | ||||||| |||||| ||||| | ||  ||||||||||| |||||||    
T  24166527 gactaatctggctcgtgcgtagaggcatgcgcactggccaaacgttgtttcccttgggaatcgaacccagtattccccgagtacgtccttggaaggagct 24166428  T
Q  228 ccttgccaccggagcccaa 246  Q
    ||||||||| |||||||||    
T  24166427 ccttgccactggagcccaa 24166409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 89 - 234
Target Start/End: Complemental strand, 20128425 - 20128280
Alignment:
Q  89 ttgggtttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaat 188  Q
    |||| |||||||| |||||| | | ||| || | |||||||||||||  |||||||| || |||||||||||||| |||||| ||||||| |||| ||||    
T  20128425 ttggctttcgcaccggtttctgacccaccaatggtggacgactaatctagctcgtgcgtaaaggcatgcgcactggccaagcattgttccccctgagaat 20128326  T
Q  189 agaacccggtatttcacggatacgtccttggtaggagctccttgcc 234  Q
     |||||| ||||| | ||||||||||||||| |||| |||||||||    
T  20128325 cgaacccagtattccccggatacgtccttggaaggaactccttgcc 20128280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 129 - 246
Target Start/End: Complemental strand, 29588812 - 29588695
Alignment:
Q  129 actaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggagctc 228  Q
    ||||||| ||||||||| ||||||||||||||||  |||||| ||||| | ||||||||| |||||||||||||| |||  ||||| |||| | ||||||    
T  29588812 actaatccggctcgtgcgtagaggcatgcgcactagccaagctttgtttcccctgggaatcgaacccggtatttcccgggcacgtctttggaatgagctc 29588713  T
Q  229 cttgccaccggagcccaa 246  Q
    |||||||| |||||||||    
T  29588712 cttgccactggagcccaa 29588695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 89 - 246
Target Start/End: Complemental strand, 33647837 - 33647680
Alignment:
Q  89 ttgggtttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaat 188  Q
    |||| |||||||| ||||||||   ||| ||||||| |||||||||| || |||||| |||||| ||| ||||||  ||||||||||||  ||||| |||    
T  33647837 ttggttttcgcaccggtttccgatccaccaaagatgaacgactaatctggttcgtgcgtagaggaatgtgcactggtcaagcgttgttctccctggaaat 33647738  T
Q  189 agaacccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaa 246  Q
     |||||||||||| | | ||||||||||||  ||||||||||||||||  ||||||||    
T  33647737 cgaacccggtattccccagatacgtccttgaaaggagctccttgccactagagcccaa 33647680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 123 - 247
Target Start/End: Original strand, 295562 - 295685
Alignment:
Q  123 tggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtag 222  Q
    ||||||||||||| || |||||| ||||||||||||||||| |||| |||||||||| |||||||| ||| | |||||| | ||||||||||||| | ||    
T  295562 tggacgactaatctggttcgtgcgtagaggcatgcgcactggccaaacgttgttcct-ctgggaatcgaatctggtattccccggatacgtccttagaag 295660  T
Q  223 gagctccttgccaccggagcccaaa 247  Q
    | | |||||||||| ||||||||||    
T  295661 gtgttccttgccactggagcccaaa 295685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 127 - 246
Target Start/End: Original strand, 3574479 - 3574598
Alignment:
Q  127 cgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggagc 226  Q
    ||||||||| | ||||||| ||||||||||||||||| ||||| |||||||  ||||||||| |||| ||||||| |   | ||||||||||| ||||||    
T  3574479 cgactaatccgactcgtgcgtagaggcatgcgcactggccaagtgttgttctccctgggaattgaactcggtattccctaggtacgtccttggaaggagc 3574578  T
Q  227 tccttgccaccggagcccaa 246  Q
    |||||||||| |||||||||    
T  3574579 tccttgccactggagcccaa 3574598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 94 - 224
Target Start/End: Original strand, 7246646 - 7246776
Alignment:
Q  94 tttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaac 193  Q
    |||||||| |||||||| | ||| |||| ||| ||||||||| ||||| ||| ||||||||||||||||| ||||||||||||||  || ||||| ||||    
T  7246646 tttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttcccactaggaatcgaac 7246745  T
Q  194 ccggtatttcacggatacgtccttggtagga 224  Q
    || ||||| | ||| ||||||||||| ||||    
T  7246746 ccagtattccccgggtacgtccttggaagga 7246776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 105 - 235
Target Start/End: Original strand, 49260676 - 49260806
Alignment:
Q  105 tttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttca 204  Q
    |||||| | ||| |||| ||| ||||||||| ||||||||| ||||||||||||||||| |||||||||||||| | ||||||| |||  | ||||| |     
T  49260676 tttccgacccaccaaaggtggtcgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttccccttgggaattgaattcagtattccc 49260775  T
Q  205 cggatacgtccttggtaggagctccttgcca 235  Q
    ||||||| ||||||| ||||| |||||||||    
T  49260776 cggatacatccttggaaggagttccttgcca 49260806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 94 - 247
Target Start/End: Complemental strand, 38075544 - 38075391
Alignment:
Q  94 tttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaac 193  Q
    |||||||  |||||||| | ||| |||| ||||| | ||||  ||||| ||| ||||||||||||||||| |||||||||||| | |||| |||| ||||    
T  38075544 tttcgcatcggtttccgacccaccaaaggtggacaattaattcggctcatgcgtagaggcatgcgcactggccaagcgttgtttcccctgagaatcgaac 38075445  T
Q  194 ccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaaa 247  Q
    ||||||||   || |||||||||||| |||| ||||||||| | ||||||||||    
T  38075444 ccggtattctccgaatacgtccttggaaggaactccttgccgctggagcccaaa 38075391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 127 - 219
Target Start/End: Original strand, 3159502 - 3159594
Alignment:
Q  127 cgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttgg 219  Q
    ||||||||| ||||||||| ||||||||||||||||| |||||||||||||| ||||| | | ||||||||||||   |||||||||||||||    
T  3159502 cgactaatctggctcgtgcgtagaggcatgcgcactggccaagcgttgttccccctggaagtcgaacccggtattctccggatacgtccttgg 3159594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 118 - 246
Target Start/End: Complemental strand, 7742012 - 7741884
Alignment:
Q  118 aaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtcctt 217  Q
    |||||||||||||||||| || |||||| |||||||||| |||||| |||||||||||| | |||| || | ||||||| |||| | || |||||| |||    
T  7742012 aaagatggacgactaatctggatcgtgcgtagaggcatgtgcactggccaagcgttgttacccctgagattggaacccgatattcctcgaatacgtactt 7741913  T
Q  218 ggtaggagctccttgccaccggagcccaa 246  Q
    |  ||||||||||||||||  ||||||||    
T  7741912 gaaaggagctccttgccactagagcccaa 7741884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 118 - 246
Target Start/End: Original strand, 41162906 - 41163034
Alignment:
Q  118 aaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtcctt 217  Q
    |||| ||| ||||||||  ||||| |||||||| |||||  ||||| ||||| ||||||||  |||| ||| |||| ||||||||| |||||||||||||    
T  41162906 aaaggtgggcgactaattcggctcatgcatagaagcatgtacactggccaagtgttgttccctctggaaatcgaactcggtatttcccggatacgtcctt 41163005  T
Q  218 ggtaggagctccttgccaccggagcccaa 246  Q
    || |||||||||||| ||| |||||||||    
T  41163006 ggaaggagctccttgtcactggagcccaa 41163034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 127 - 247
Target Start/End: Original strand, 41339428 - 41339548
Alignment:
Q  127 cgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggagc 226  Q
    ||||||||| | ||||||| ||||||||| | ||||| |||||||||||||| | ||||| | ||||||||||||   ||| ||||||||||| ||||||    
T  41339428 cgactaatccgtctcgtgcgtagaggcatacacactggccaagcgttgttccccttgggagtcgaacccggtattctccgggtacgtccttggaaggagc 41339527  T
Q  227 tccttgccaccggagcccaaa 247  Q
    ||||||||||  |||||||||    
T  41339528 tccttgccactagagcccaaa 41339548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 127 - 246
Target Start/End: Original strand, 48317308 - 48317427
Alignment:
Q  127 cgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggagc 226  Q
    ||||||||| ||||||||| ||||||||| | |||||||||||||||||||||||||  ||| ||| || ||||||  || ||||||| |||| | ||||    
T  48317308 cgactaatccggctcgtgcgtagaggcatacacactgaccaagcgttgttcctcctgaaaatcgaatccagtatttttcgaatacgtcattggaatgagc 48317407  T
Q  227 tccttgccaccggagcccaa 246  Q
    || ||||||| |||||||||    
T  48317408 tctttgccactggagcccaa 48317427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 94 - 246
Target Start/End: Original strand, 6032643 - 6032792
Alignment:
Q  94 tttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaac 193  Q
    |||||||| |||||||| | ||| |||| | ||||||||||| ||||| | | |||||||||| ||||||  |||||||    |||||||  ||| ||||    
T  6032643 tttcgcaccggtttccgacccaccaaaggtagacgactaatccggctcattcgtagaggcatgagcactggtcaagcgta---cctcctgaaaattgaac 6032739  T
Q  194 ccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaa 246  Q
    |||||||| | ||| ||||||||||| |||||||||||||||| |||||||||    
T  6032740 ccggtattccccgggtacgtccttggaaggagctccttgccactggagcccaa 6032792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 94 - 195
Target Start/End: Complemental strand, 16450411 - 16450310
Alignment:
Q  94 tttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaac 193  Q
    |||||||| |||||||| |  || |||| ||||||||||||| ||||| ||| |||||||||| |||||| |||||||||||||| ||||||||| ||||    
T  16450411 tttcgcaccggtttccgacctaccaaaggtggacgactaatctggctcatgcgtagaggcatgtgcactggccaagcgttgttccccctgggaatcgaac 16450312  T
Q  194 cc 195  Q
    ||    
T  16450311 cc 16450310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 89 - 246
Target Start/End: Complemental strand, 20421889 - 20421733
Alignment:
Q  89 ttgggtttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaat 188  Q
    |||| ||||| ||||||||||| | ||  || ||||||||| ||||| ||||| ||| ||||||||||||||||| ||||| |||||||| ||||| |||    
T  20421889 ttggctttcgaactggtttccgacccatcaatgatggacgattaatctggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctggaaat 20421790  T
Q  189 agaacccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaa 246  Q
     ||| || ||||| | | |||||||| |||  |||||||||||||||| | |||||||    
T  20421789 cgaa-ccagtattccccagatacgtctttgaaaggagctccttgccactgaagcccaa 20421733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 89 - 185
Target Start/End: Complemental strand, 18531635 - 18531539
Alignment:
Q  89 ttgggtttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctggg 185  Q
    |||| |||||||| |||||||| | ||| |||| ||||||| ||||| || |||||||| ||||||||||||||||||||| |||||||| ||||||    
T  18531635 ttggctttcgcaccggtttccgacccacaaaaggtggacgaataatctggttcgtgcatggaggcatgcgcactgaccaagtgttgttccccctggg 18531539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 147 - 247
Target Start/End: Original strand, 40272384 - 40272484
Alignment:
Q  147 tagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaa 246  Q
    ||||||||||||||||| |||||||||||||| | ||| ||| ||||||| |||| | ||||||| || |||| | ||||||||| ||||||||||||||    
T  40272384 tagaggcatgcgcactggccaagcgttgttccccatggaaatcgaacccgatattccccggatacatcattggaaagagctccttaccaccggagcccaa 40272483  T
Q  247 a 247  Q
    |    
T  40272484 a 40272484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 129 - 224
Target Start/End: Original strand, 48015108 - 48015203
Alignment:
Q  129 actaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtagga 224  Q
    ||||||| ||||||||| ||||||| ||||||||| ||||||||||||||  |||||||| |||||||||||| | ||| |||||| |||| ||||    
T  48015108 actaatccggctcgtgcgtagaggcttgcgcactggccaagcgttgttcccactgggaatcgaacccggtattcctcgggtacgtctttggaagga 48015203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 89 - 247
Target Start/End: Complemental strand, 13073654 - 13073496
Alignment:
Q  89 ttgggtttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaat 188  Q
    ||||||||||||| |||||||| | ||| |||| |  |||||||||| || || ||| |||||| |||||||||| |||| | ||||||| | |||||||    
T  13073654 ttgggtttcgcaccggtttccgacccaccaaaggtaaacgactaatctggttcatgcgtagaggtatgcgcactggccaaacattgttccccatgggaat 13073555  T
Q  189 agaacccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaaa 247  Q
     |||| |||||||   | | ||||||||||| |||||||| |||||||  |||||||||    
T  13073554 cgaactcggtattctccaggtacgtccttggaaggagctcattgccactagagcccaaa 13073496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 118 - 243
Target Start/End: Original strand, 15839959 - 15840083
Alignment:
Q  118 aaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtcctt 217  Q
    ||||| || ||||||||| ||||| ||| ||||||||||||||||| |||| |||| || || || ||||| |||||||||||| | |   |||||||||    
T  15839959 aaagaagggcgactaatccggctcatgcgtagaggcatgcgcactggccaaacgttatt-cttctaggaatcgaacccggtattccccaagtacgtcctt 15840057  T
Q  218 ggtaggagctccttgccaccggagcc 243  Q
    || |||||||||||||||| ||||||    
T  15840058 ggaaggagctccttgccactggagcc 15840083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 171 - 247
Target Start/End: Complemental strand, 13552148 - 13552072
Alignment:
Q  171 gttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaaa 247  Q
    ||||||||||||| |||| ||||||| |||| | ||||||||| ||||| |||||||||||||||| ||||||||||    
T  13552148 gttgttcctcctgagaatcgaacccgatattccccggatacgtgcttggaaggagctccttgccactggagcccaaa 13552072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 127 - 247
Target Start/End: Complemental strand, 14124094 - 14123974
Alignment:
Q  127 cgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggagc 226  Q
    ||||||||| ||||||||  ||||||||||||||||| ||||  |||||||| ||||||||| ||||| |||||| | |   ||||| ||||| ||||||    
T  14124094 cgactaatccggctcgtgtgtagaggcatgcgcactggccaaatgttgttccccctgggaatcgaacctggtattcctcaagtacgttcttggaaggagc 14123995  T
Q  227 tccttgccaccggagcccaaa 247  Q
    | |||||||  ||||||||||    
T  14123994 ttcttgccattggagcccaaa 14123974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 118 - 246
Target Start/End: Original strand, 20532433 - 20532561
Alignment:
Q  118 aaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtcctt 217  Q
    |||| ||| ||||| ||| ||||| ||| ||||||||||||||||| |||||||||||||||||||| ||| |||| |||||||   ||| || | ||||    
T  20532433 aaaggtgggcgacttatccggctcatgcgtagaggcatgcgcactggccaagcgttgttcctcctggaaatcgaactcggtattctccgggtatggcctt 20532532  T
Q  218 ggtaggagctccttgccaccggagcccaa 246  Q
    || | |||| ||||||||| |||| ||||    
T  20532533 ggaatgagcaccttgccactggagtccaa 20532561  T

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Target: chr4; HSP #45
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 95 - 227
Target Start/End: Complemental strand, 21429411 - 21429279
Alignment:
Q  95 ttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacc 194  Q
    ||||||| |||||||| | ||| |||| |||||||||| || | ||||||| ||||||||||||||||| | || ||||||||| |||   ||| |||||    
T  21429411 ttcgcaccggtttccgacccaccaaaggtggacgactagtctgactcgtgcgtagaggcatgcgcactggctaaacgttgttccccctaaaaatcgaacc 21429312  T
Q  195 cggtatttcacggatacgtccttggtaggagct 227  Q
    || |||| | |||||||||| |||| |||||||    
T  21429311 cgatattcctcggatacgtctttggaaggagct 21429279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 127 - 247
Target Start/End: Original strand, 55005339 - 55005459
Alignment:
Q  127 cgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggagc 226  Q
    ||||||||| | || |||| |||||||||||||| ||  ||||||||||| | |||| |||| |||  ||||||||| | |||||||| |||| ||||||    
T  55005339 cgactaatccgacttgtgcgtagaggcatgcgcaatggtcaagcgttgtttcccctgcgaatcgaattcggtatttcccagatacgtctttggaaggagc 55005438  T
Q  227 tccttgccaccggagcccaaa 247  Q
    || |||||||| |||||||||    
T  55005439 tcattgccaccagagcccaaa 55005459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 79 - 194
Target Start/End: Complemental strand, 4738744 - 4738629
Alignment:
Q  79 ttttttattcttgggtttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcc 178  Q
    |||||| || |||| |||||||| |||||||| | ||| |||| ||||||||||||   |||| ||| ||||| ||||||||||| | ||||||||||||    
T  4738744 ttttttttttttggctttcgcaccggtttccgacccaccaaaggtggacgactaattcagctcatgcgtagagacatgcgcactggcaaagcgttgttcc 4738645  T
Q  179 tcctgggaatagaacc 194  Q
    |||||| ||| |||||    
T  4738644 tcctggaaatcgaacc 4738629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 127 - 247
Target Start/End: Complemental strand, 7000598 - 7000482
Alignment:
Q  127 cgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggagc 226  Q
    ||||||||| ||||||||| ||||||||    || || ||||||||||||| |||||||||| |||| ||||||| | ||  ||||||||||| ||||||    
T  7000598 cgactaatctggctcgtgcgtagaggca----cattggccaagcgttgttcttcctgggaatcgaactcggtattccccgagtacgtccttggaaggagc 7000503  T
Q  227 tccttgccaccggagcccaaa 247  Q
    | |||||||| | ||||||||    
T  7000502 ttcttgccactgtagcccaaa 7000482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 94 - 247
Target Start/End: Original strand, 15732448 - 15732601
Alignment:
Q  94 tttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaac 193  Q
    |||||||| ||||||||   ||| |||||||  |||||||||  || ||||| |||||||||| |||||| ||||| |||||||| | |  |||| ||||    
T  15732448 tttcgcaccggtttccgatccaccaaagatgagcgactaatctagcccgtgcgtagaggcatgtgcactggccaagtgttgttccccatatgaatcgaac 15732547  T
Q  194 ccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaaa 247  Q
    ||||||||   ||||||||||||||| || |  | |||||||| ||||||||||    
T  15732548 ccggtattctccggatacgtccttggaagaattttcttgccactggagcccaaa 15732601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 224
Target Start/End: Complemental strand, 43468425 - 43468328
Alignment:
Q  127 cgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtagga 224  Q
    ||||||||| ||||| ||| |||||  ||| |||||| |||||||||||||| ||||||||| |||||||||||| | ||| ||||| ||||| ||||    
T  43468425 cgactaatccggctcatgcgtagagaaatgtgcactggccaagcgttgttccccctgggaatcgaacccggtattccccgggtacgttcttggaagga 43468328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 123 - 247
Target Start/End: Complemental strand, 20354719 - 20354595
Alignment:
Q  123 tggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtag 222  Q
    ||||||||||||| | ||| ||| ||||||||||||||||  |||||||||||||  ||||| |||  ||| ||||||||  ||  | ||||||||| ||    
T  20354719 tggacgactaatccgactcatgcgtagaggcatgcgcactagccaagcgttgttctccctggaaatcaaactcggtatttttcgagttcgtccttggaag 20354620  T
Q  223 gagctccttgccaccggagcccaaa 247  Q
    ||| |||||||||| |||| |||||    
T  20354619 gagatccttgccactggagtccaaa 20354595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 127 - 235
Target Start/End: Original strand, 49952179 - 49952287
Alignment:
Q  127 cgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggagc 226  Q
    ||||||||| ||||| ||| ||||||| |||||||||||||| ||||||| || |||  |||  ||||   |||||| || |||||||||||| ||||||    
T  49952179 cgactaatccggctcatgcgtagaggcgtgcgcactgaccaaacgttgtttcttctgaaaatcaaacctaatatttcccgaatacgtccttggaaggagc 49952278  T
Q  227 tccttgcca 235  Q
    |||||||||    
T  49952279 tccttgcca 49952287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 94 - 201
Target Start/End: Complemental strand, 16645229 - 16645122
Alignment:
Q  94 tttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaac 193  Q
    |||||||| |||||||| | ||| | || ||| ||||||||||| ||| ||  ||||||||||| ||||| ||||||||||||| |||||  ||| ||||    
T  16645229 tttcgcaccggtttccgacccaccacaggtgggcgactaatcagactcatgtgtagaggcatgcacactggccaagcgttgttcttcctgaaaatcgaac 16645130  T
Q  194 ccggtatt 201  Q
    ||||||||    
T  16645129 ccggtatt 16645122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 129 - 247
Target Start/End: Complemental strand, 48656295 - 48656176
Alignment:
Q  129 actaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttgg-taggagct 227  Q
    |||||||  |||| |||| ||||||||| |||| |  |||||||||||| |||||||||| || |||| |||||| ||| |||||||||||  ||||||     
T  48656295 actaatccagctcatgcagagaggcatgtgcacaggtcaagcgttgttcttcctgggaattgagcccgatatttctcgggtacgtccttggaaaggagcg 48656196  T
Q  228 ccttgccaccggagcccaaa 247  Q
     |||||||| ||||||||||    
T  48656195 tcttgccactggagcccaaa 48656176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 236
Target Start/End: Original strand, 24850671 - 24850768
Alignment:
Q  138 gctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggagctccttgccac 236  Q
    |||| ||| |||||||||||||||||  |||| |||||||| ||||  ||| ||| | |||||||| ||||||||||||||| | ||||||||||||||    
T  24850671 gctcatgcgtagaggcatgcgcactggtcaagtgttgttcc-cctgataattgaatctggtatttcccggatacgtccttggaatgagctccttgccac 24850768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 153 - 246
Target Start/End: Original strand, 27531717 - 27531809
Alignment:
Q  153 catgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaa 246  Q
    |||||||| || |||||| ||||||| | ||||||| |||||||||||| |  || ||||||||||| |||||||||||||||| |||| ||||    
T  27531717 catgcgcattggccaagcattgttcc-catgggaatcgaacccggtattccctgggtacgtccttggaaggagctccttgccactggagtccaa 27531809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 97 - 201
Target Start/End: Complemental strand, 3507378 - 3507275
Alignment:
Q  97 cgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccg 196  Q
    |||||| |||||||   ||| |||| ||||||||||||| ||||||||  |||||||| |||||||  |||||||||||||| | ||||||| |||||||    
T  3507378 cgcactagtttccgatccaccaaaggtggacgactaatccggctcgtgtgtagaggcacgcgcactagccaagcgttgttcc-cttgggaatcgaacccg 3507280  T
Q  197 gtatt 201  Q
     ||||    
T  3507279 atatt 3507275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 127 - 187
Target Start/End: Complemental strand, 17080121 - 17080061
Alignment:
Q  127 cgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaa 187  Q
    ||||||||| ||||| ||| ||||||||||||||||| |||||||||||||| | ||||||    
T  17080121 cgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttccccatgggaa 17080061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 247
Target Start/End: Original strand, 42722408 - 42722531
Alignment:
Q  123 tggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtag 222  Q
    ||||||||||||| | ||| |||||||||| ||||||||||  |||| |||||||| |||||||||  ||||||||||| | ||| ||| || |||  ||    
T  42722408 tggacgactaatccgactcatgcatagaggtatgcgcactggtcaagtgttgttcc-cctgggaatcaaacccggtattccccgggtacatctttgaaag 42722506  T
Q  223 gagctccttgccaccggagcccaaa 247  Q
    ||||||||  |||| |||| |||||    
T  42722507 gagctcctctccactggagtccaaa 42722531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 201
Target Start/End: Original strand, 8064827 - 8064905
Alignment:
Q  123 tggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatt 201  Q
    ||||||||||||| ||||| ||| |||||||||||||||||  |||| ||| |||| | ||||||| |||||| |||||    
T  8064827 tggacgactaatccggctcatgcgtagaggcatgcgcactggtcaagtgttattccccttgggaatcgaacccagtatt 8064905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 201
Target Start/End: Complemental strand, 10541090 - 10541020
Alignment:
Q  131 taatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatt 201  Q
    ||||| ||||||||| ||||||||||| ||||| |||||||||||| | ||||| ||| ||||||| ||||    
T  10541090 taatctggctcgtgcgtagaggcatgcacactggccaagcgttgtttcccctggaaatcgaacccgatatt 10541020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 159 - 236
Target Start/End: Complemental strand, 13436858 - 13436783
Alignment:
Q  159 cactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggagctccttgccac 236  Q
    ||||||||||||||||||||  |||||||| |||||||||||| | ||  ||||||||||  ||||||||||| ||||    
T  13436858 cactgaccaagcgttgttccctctgggaatcgaacccggtattccccg--tacgtccttgaaaggagctccttaccac 13436783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 236
Target Start/End: Original strand, 48352509 - 48352651
Alignment:
Q  94 tttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaac 193  Q
    |||||||||||| |||| | ||  |||||||||||||||||| ||||||||    |||||||| |||||| |||| ||||||||   || ||| | | |     
T  48352509 tttcgcactggtctccgactcatcaaagatggacgactaatccggctcgtgtgaggaggcatgtgcactggccaaacgttgttctatctaggagtcgtat 48352608  T
Q  194 ccggtatttcacggatacgtccttggtaggagctccttgccac 236  Q
    |||||||||| | ||||||||||||  | |||||| |||||||    
T  48352609 ccggtatttctcagatacgtccttgaaatgagctctttgccac 48352651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 117 - 246
Target Start/End: Original strand, 12703568 - 12703697
Alignment:
Q  117 taaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtcct 216  Q
    ||||||||| ||||||||| ||||  ||| ||||| ||| | |||||  |||||||||||||  |||| ||| |||| | ||||| | ||  ||||||||    
T  12703568 taaagatgggcgactaatccggcttatgcgtagagacatacacactggtcaagcgttgttcccactggaaatcgaactcagtattcctcgagtacgtcct 12703667  T
Q  217 tggtaggagctccttgccaccggagcccaa 246  Q
    | | |||| ||||||||||| |||||||||    
T  12703668 ttgaaggatctccttgccactggagcccaa 12703697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 183
Target Start/End: Complemental strand, 14859402 - 14859313
Alignment:
Q  94 tttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctg 183  Q
    ||||||||  ||||||| ||||  |||| |||| |||||||| ||||||||| ||||| |||||||||||  ||| | ||||||||||||    
T  14859402 tttcgcaccagtttccgacacatcaaaggtggatgactaatctggctcgtgcgtagagacatgcgcactggtcaaacattgttcctcctg 14859313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 103 - 236
Target Start/End: Complemental strand, 30317335 - 30317202
Alignment:
Q  103 ggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtattt 202  Q
    |||||||| | ||| |||| ||| ||||||||  ||||||||| ||||||||| || |||| ||||||||||||||  ||| |||| ||||| | ||||     
T  30317335 ggtttccgacccaccaaaggtgggcgactaattcggctcgtgcgtagaggcattcgtactggccaagcgttgttccctctgagaatcgaacctgatattc 30317236  T
Q  203 cacggatacgtccttggtaggagctccttgccac 236  Q
    | ||  |||||||||   |||| |||||||||||    
T  30317235 cccgagtacgtccttaaaaggaactccttgccac 30317202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 247
Target Start/End: Original strand, 34667698 - 34667755
Alignment:
Q  190 gaacccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaaa 247  Q
    |||||||||||| | ||| ||||||||||| ||||||||||||||||  |||||||||    
T  34667698 gaacccggtattccccgggtacgtccttggaaggagctccttgccactagagcccaaa 34667755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 137 - 177
Target Start/End: Complemental strand, 8424622 - 8424582
Alignment:
Q  137 ggctcgtgcatagaggcatgcgcactgaccaagcgttgttc 177  Q
    ||||||||||||||||||||||||||| |||| ||||||||    
T  8424622 ggctcgtgcatagaggcatgcgcactggccaaacgttgttc 8424582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 89 - 228
Target Start/End: Complemental strand, 21192756 - 21192619
Alignment:
Q  89 ttgggtttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaat 188  Q
    |||| |||||||| ||||| || | ||| |||  ||| ||| ||||| | ||||||| ||||||||||||||||| || | |||||||||||  || | |    
T  21192756 ttggctttcgcaccggttttcgactcaccaaatgtgggcgattaatccgactcgtgcgtagaggcatgcgcactggcccaacgttgttcctc--ggaact 21192659  T
Q  189 agaacccggtatttcacggatacgtccttggtaggagctc 228  Q
     |||||||||||||| |  ||||||| |||| ||||||||    
T  21192658 cgaacccggtatttcccaaatacgtcattggaaggagctc 21192619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 247
Target Start/End: Complemental strand, 37382622 - 37382503
Alignment:
Q  128 gactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcac-ggatacgtccttggtaggagc 226  Q
    |||||||| || ||||||||||||||||| ||| || |||| ||||||||  ||||  ||| ||||| |||| ||||| ||||||| | || | ||||||    
T  37382622 gactaatccggttcgtgcatagaggcatgtgcattggccaatcgttgttctccctgaaaattgaacctggta-ttcactggatacgacatttgaaggagc 37382524  T
Q  227 tccttgccaccggagcccaaa 247  Q
    |||||||||| | ||||||||    
T  37382523 tccttgccactgtagcccaaa 37382503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 205 - 247
Target Start/End: Original strand, 19651556 - 19651598
Alignment:
Q  205 cggatacgtccttggtaggagctccttgccaccggagcccaaa 247  Q
    ||||||||||||||| |||||||| ||||||| ||||||||||    
T  19651556 cggatacgtccttggaaggagctcattgccactggagcccaaa 19651598  T

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Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 176
Target Start/End: Complemental strand, 23788476 - 23788426
Alignment:
Q  126 acgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgtt 176  Q
    ||||||||||  |||||||| ||||||||||||||||||| || |||||||    
T  23788476 acgactaatccagctcgtgcgtagaggcatgcgcactgactaaacgttgtt 23788426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 121 - 247
Target Start/End: Original strand, 26479976 - 26480102
Alignment:
Q  121 gatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggt 220  Q
    ||||||||| ||||  ||||| ||| |||||||||||| |||| ||||| ||| |||| | |  |||| |||| ||||||| | |   ||||| |||||     
T  26479976 gatggacgattaattcggctcatgcgtagaggcatgcgtactggccaagtgttattccccttaagaatcgaactcggtattccccatgtacgtacttgga 26480075  T
Q  221 aggagctccttgccaccggagcccaaa 247  Q
    |||||||||||||||  ||||||||||    
T  26480076 aggagctccttgccagtggagcccaaa 26480102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 103 - 177
Target Start/End: Complemental strand, 50486045 - 50485971
Alignment:
Q  103 ggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttc 177  Q
    |||||||| | |||||| | ||| ||||||||| ||||||||| ||||||||||||  ||| |||| ||||||||    
T  50486045 ggtttccgacccactaatggtgggcgactaatccggctcgtgcgtagaggcatgcgttctggccaatcgttgttc 50485971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 118 - 176
Target Start/End: Original strand, 55703776 - 55703834
Alignment:
Q  118 aaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgtt 176  Q
    |||||||||| ||||||| ||||||||  | ||| |||||||||||||||| |||||||    
T  55703776 aaagatggacaactaatccggctcgtgggttgagacatgcgcactgaccaaacgttgtt 55703834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 168
Target Start/End: Complemental strand, 14567317 - 14567276
Alignment:
Q  127 cgactaatcaggctcgtgcatagaggcatgcgcactgaccaa 168  Q
    ||||||||| ||||||||| ||||||||||||||||| ||||    
T  14567317 cgactaatccggctcgtgcgtagaggcatgcgcactggccaa 14567276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 211
Target Start/End: Complemental strand, 46108773 - 46108688
Alignment:
Q  123 tggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatac 211  Q
    ||||||||||||| ||||| ||| ||||||||||||||||  ||||  |||||||| |||||  ||  ||||||||||||| |||||||    
T  46108773 tggacgactaatctggctcatgcgtagaggcatgcgcactagccaaatgttgttcc-cctggtgat--aacccggtatttcccggatac 46108688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 168
Target Start/End: Complemental strand, 54946351 - 54946286
Alignment:
Q  103 ggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaa 168  Q
    |||||||| | ||| || ||||| ||||||||| ||||| ||| |||||||||||| |||||||||    
T  54946351 ggtttccgacccaccaatgatgggcgactaatccggctcatgcgtagaggcatgcggactgaccaa 54946286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 76; Significance: 1e-34; HSPs: 4)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 80 - 243
Target Start/End: Complemental strand, 319545 - 319382
Alignment:
Q  80 tttttattcttgggtttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcct 179  Q
    ||||| || |||| |||||||| |||||||| | ||| |||| |||||||||||||  |||| |||||||||| |||||||||| ||||||||||||||     
T  319545 tttttttttttggctttcgcaccggtttccgccccaccaaaggtggacgactaatccagctcatgcatagagggatgcgcactggccaagcgttgttccc 319446  T
Q  180 cctgggaatagaacccggtatttcacggatacgtccttggtaggagctccttgccaccggagcc 243  Q
    ||| | |||  ||||||||||| | ||||||||||||||| |||||||||||||||| ||||||    
T  319445 cctagaaatcaaacccggtattccccggatacgtccttggaaggagctccttgccactggagcc 319382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 94 - 246
Target Start/End: Complemental strand, 679 - 527
Alignment:
Q  94 tttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaac 193  Q
    |||||||| |||||||| | ||| |||| ||  ||||||||| ||||| | | ||||||||||| |||||| |||| |||||||| |||| |||| ||||    
T  679 tttcgcaccggtttccgacccaccaaaggtgagcgactaatctggctcatacgtagaggcatgcacactgatcaagtgttgttccccctgcgaatcgaac 580  T
Q  194 ccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaa 246  Q
    |||||||| | ||| ||||||||||| ||||||||||||||||  ||||||||    
T  579 ccggtattccccgggtacgtccttggaaggagctccttgccactagagcccaa 527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 159 - 246
Target Start/End: Original strand, 412091 - 412178
Alignment:
Q  159 cactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaa 246  Q
    |||||||||||||||||||| |||| |||| |||| ||||||| | ||||||||||||||| |||||||| | ||||| | |||||||    
T  412091 cactgaccaagcgttgttccccctgtgaatcgaactcggtattccccggatacgtccttggaaggagctcatcgccactgaagcccaa 412178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 236
Target Start/End: Complemental strand, 139491 - 139398
Alignment:
Q  147 tagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacgga----tacgtccttggtaggagctccttgccac 236  Q
    |||||||||| |||||| |||||||||||||||  ||||||| ||||||| |||| | | ||    ||||||||||| ||||||||||||||||    
T  139491 tagaggcatgtgcactggccaagcgttgttccttttgggaatcgaacccgatattccccagatacgtacgtccttggaaggagctccttgccac 139398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 70; Significance: 4e-31; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 96 - 247
Target Start/End: Complemental strand, 68621 - 68473
Alignment:
Q  96 tcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaaccc 195  Q
    |||||| ||||| || | ||| |||| ||| ||||||||| ||||||||| |||||||||||||||   |||||||||||||| ||||||||| ||||||    
T  68621 tcgcaccggttttcgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcac---ccaagcgttgttccccctgggaatcgaaccc 68525  T
Q  196 ggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaaa 247  Q
    | |||||| ||| ||||||||||| ||||||||||||||||  |||||||||    
T  68524 gatatttcccgggtacgtccttggaaggagctccttgccactagagcccaaa 68473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 68; Significance: 6e-30; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 127 - 246
Target Start/End: Original strand, 271107 - 271226
Alignment:
Q  127 cgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggagc 226  Q
    ||||||| | ||||||||| ||||| |||||||||||||||||||||||||| ||||||||| ||||||| ||||   ||| ||||||||||| ||||||    
T  271107 cgactaacccggctcgtgcgtagagacatgcgcactgaccaagcgttgttccccctgggaatcgaacccgatattctccgggtacgtccttggaaggagc 271206  T
Q  227 tccttgccaccggagcccaa 246  Q
    ||||||||||| ||||||||    
T  271207 tccttgccaccagagcccaa 271226  T

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Target: scaffold0005; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 168
Target Start/End: Original strand, 250058 - 250099
Alignment:
Q  127 cgactaatcaggctcgtgcatagaggcatgcgcactgaccaa 168  Q
    ||||||||| ||||||||| ||||||||||||||||| ||||    
T  250058 cgactaatccggctcgtgcgtagaggcatgcgcactggccaa 250099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 67; Significance: 2e-29; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 99 - 241
Target Start/End: Complemental strand, 9949 - 9807
Alignment:
Q  99 cactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggt 198  Q
    |||||||||| | | ||| |||| ||||||||||||| ||||||||| ||||||||||||||||| |||||||||||||| ||||| ||| ||| |||||    
T  9949 cactggtttctgacccaccaaaggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttccccctggaaatcgaatccggt 9850  T
Q  199 atttcacggatacgtccttggtaggagctccttgccaccggag 241  Q
    ||| | | ||||| ||||||| |||||||||||| ||| ||||    
T  9849 attcctcagatacatccttggaaggagctccttgtcactggag 9807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 63; Significance: 6e-27; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 89 - 247
Target Start/End: Complemental strand, 41158 - 41000
Alignment:
Q  89 ttgggtttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaat 188  Q
    |||| ||||| || |||||||| | ||| |||||||| ||||||||| ||||||||| ||||||||||| ||||||||||| |||||||| | || ||||    
T  41158 ttggctttcgaaccggtttccgactcaccaaagatgggcgactaatccggctcgtgcgtagaggcatgcacactgaccaagtgttgttccccttgagaat 41059  T
Q  189 agaacccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaaa 247  Q
     ||||||| |||| |  |  ||||||| ||| |||||||||||||||| ||||||||||    
T  41058 cgaacccgatattccctgagtacgtccatggaaggagctccttgccactggagcccaaa 41000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 58; Significance: 6e-24; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 94 - 247
Target Start/End: Original strand, 8701 - 8863
Alignment:
Q  94 tttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaac 193  Q
    ||||||||  ||||||| | ||| |||| |||||||||||||  |||| ||| |||||||| |||||||| |||||||||||||| ||||||||| ||||    
T  8701 tttcgcaccagtttccgacccaccaaaggtggacgactaatccagctcatgcgtagaggcaagcgcactggccaagcgttgttccccctgggaatcgaac 8800  T
Q  194 ccggtatttc------acg---gatacgtccttggtaggagctccttgccaccggagcccaaa 247  Q
    |||||||| |      |||   ||||||||||||| |||||||||||||||| ||||||||||    
T  8801 ccggtattcctctgatacgtctgatacgtccttggaaggagctccttgccactggagcccaaa 8863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376 (Bit Score: 55; Significance: 4e-22; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 118 - 236
Target Start/End: Complemental strand, 12755 - 12637
Alignment:
Q  118 aaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtcctt 217  Q
    |||| ||| ||||||||| || |||||| ||||||||||| ||||| ||||||||||||||||||  |||| |||||||||||| | |||  ||||||||    
T  12755 aaaggtgggcgactaatccggttcgtgcgtagaggcatgcacactggccaagcgttgttcctcctctgaatcgaacccggtattccccgggcacgtcctt 12656  T
Q  218 ggtaggagctccttgccac 236  Q
    || ||||||| ||||||||    
T  12655 ggaaggagcttcttgccac 12637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0635 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0635
Description:

Target: scaffold0635; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 117 - 246
Target Start/End: Original strand, 2113 - 2242
Alignment:
Q  117 taaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtcct 216  Q
    ||||| ||||||||||||| | ||  |||||||| |||||||| || | |||||||||||||| ||| |||| ||| |||||||||| |||||||||| |    
T  2113 taaaggtggacgactaatccgacttatgcatagaagcatgcgcgctaatcaagcgttgttccttctgagaatcgaatccggtatttctcggatacgtctt 2212  T
Q  217 tggtaggagctccttgccaccggagcccaa 246  Q
    ||  ||| ||||||| ||||||||||||||    
T  2213 tgaaaggtgctccttaccaccggagcccaa 2242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 94 - 201
Target Start/End: Complemental strand, 6964 - 6857
Alignment:
Q  94 tttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaac 193  Q
    |||||||| |||||||| | ||| |||| ||  ||||||||| ||||| ||| ||||||||||||||||| ||||| |||||||| ||||||||| ||||    
T  6964 tttcgcaccggtttccgacccaccaaaggtgagcgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaac 6865  T
Q  194 ccggtatt 201  Q
    ||||||||    
T  6864 ccggtatt 6857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0209 (Bit Score: 51; Significance: 9e-20; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 118 - 247
Target Start/End: Complemental strand, 12658 - 12531
Alignment:
Q  118 aaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtcctt 217  Q
    |||| ||| ||||||||| | ||| ||| |||||||||||||||||  |||||||||||||  || ||||| |||||||||||||| ||  |||||||||    
T  12658 aaaggtgggcgactaatccgactcatgcgtagaggcatgcgcactggtcaagcgttgttcc--ctaggaatcgaacccggtatttctcgagtacgtcctt 12561  T
Q  218 ggtaggagctccttgccaccggagcccaaa 247  Q
    || || |||||||||||||  |||||||||    
T  12560 ggaagtagctccttgccactagagcccaaa 12531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0341 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 129 - 246
Target Start/End: Complemental strand, 18706 - 18589
Alignment:
Q  129 actaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggagctc 228  Q
    ||||||| ||||||||| ||||| |||| |||||| |||||||||||||| ||| ||||| ||||||||| ||   ||| ||| ||||||| ||||||||    
T  18706 actaatctggctcgtgcgtagagacatgtgcactggccaagcgttgttccccctaggaatcgaacccggtgttcttcgggtacatccttggaaggagctc 18607  T
Q  229 cttgccaccggagcccaa 246  Q
    |||||||| |||| ||||    
T  18606 cttgccactggagtccaa 18589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 48; Significance: 5e-18; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 94 - 201
Target Start/End: Complemental strand, 26292 - 26185
Alignment:
Q  94 tttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaac 193  Q
    ||||||||||||||||| | ||  ||   ||||||||||||| ||||||||| ||||||||||| ||||| |||||||||||||| ||||| ||| ||||    
T  26292 tttcgcactggtttccgactcatcaattgtggacgactaatccggctcgtgcgtagaggcatgcacactggccaagcgttgttccccctggaaatcgaac 26193  T
Q  194 ccggtatt 201  Q
    || |||||    
T  26192 ccagtatt 26185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 48; Significance: 5e-18; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 89 - 188
Target Start/End: Original strand, 155706 - 155805
Alignment:
Q  89 ttgggtttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaat 188  Q
    |||| |||||||| || ||||| | ||| |||| ||| ||||||||| ||||||||| ||||||||||||||||  |||||||||||||| |||||||||    
T  155706 ttggctttcgcaccggcttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactagccaagcgttgttccccctgggaat 155805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 89 - 247
Target Start/End: Original strand, 25779 - 25937
Alignment:
Q  89 ttgggtttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaat 188  Q
    ||||||||||||| |||||| | | || ||||| |||  |||||||| || ||  || ||||| ||||||||||| |||||||||||||  ||| |||||    
T  25779 ttgggtttcgcaccggtttctgacccagtaaaggtgggtgactaatctggttcacgcgtagagtcatgcgcactggccaagcgttgttctccctaggaat 25878  T
Q  189 agaacccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaaa 247  Q
     |||||  ||||| | ||  ||||| ||||| |||||||| |||| || ||||||||||    
T  25879 cgaaccttgtattccccgagtacgtacttggaaggagctctttgctactggagcccaaa 25937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 147 - 227
Target Start/End: Complemental strand, 8230 - 8151
Alignment:
Q  147 tagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggagct 227  Q
    ||||||||||||||||| |||||||||||||| | ||||||| |||||||||||| | ||| ||||||||||| |||||||    
T  8230 tagaggcatgcgcactggccaagcgttgttcc-cttgggaatcgaacccggtattccccgggtacgtccttggaaggagct 8151  T

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Target: scaffold0009 (Bit Score: 45; Significance: 3e-16; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 94 - 246
Target Start/End: Original strand, 42832 - 42984
Alignment:
Q  94 tttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaac 193  Q
    |||||||| |||||||| | ||| |||| ||| ||||||||| ||||| ||  |||||||||||||||||||||||| ||||||  ||| ||||| ||||    
T  42832 tttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcatgtgtagaggcatgcgcactgaccaagcattgttctccctaggaatcgaac 42931  T
Q  194 ccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaa 246  Q
    ||| |||| | | | ||| | ||||| || ||||| ||||||| |||| ||||    
T  42932 ccgatattccccaggtacattcttggaagtagctcgttgccactggagtccaa 42984  T

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Target: scaffold0009; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 160 - 246
Target Start/End: Complemental strand, 9479 - 9393
Alignment:
Q  160 actgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggagctccttgccaccggagcccaa 246  Q
    |||| |||||||||||||| ||||||||| |||||||||||| | |   ||||||||||  ||||||||||||  ||||||||||||    
T  9479 actggccaagcgttgttccccctgggaatcgaacccggtattccccaagtacgtccttgaaaggagctccttgttaccggagcccaa 9393  T

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Target: scaffold0316 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 94 - 236
Target Start/End: Original strand, 1614 - 1756
Alignment:
Q  94 tttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaac 193  Q
    |||||||| ||||| || | ||| |||| ||| ||||||||  ||||| ||| ||||||||||||||||| | || ||||||||| ||||| ||| ||||    
T  1614 tttcgcaccggttttcgacccaccaaaggtgggcgactaatttggctcatgcgtagaggcatgcgcactggctaatcgttgttccccctggaaatcgaac 1713  T
Q  194 ccggtatttcacggatacgtccttggtaggagctccttgccac 236  Q
    | |||||| | | |  ||||| |||| ||||||||||||||||    
T  1714 ctggtattccccaggcacgtcattggaaggagctccttgccac 1756  T

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Target: scaffold0011 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 94 - 168
Target Start/End: Complemental strand, 186626 - 186552
Alignment:
Q  94 tttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaa 168  Q
    |||| ||| |||||||| | ||||||||||| |||||||||| ||||||||| |||||||||| |||||||||||    
T  186626 tttcacaccggtttccgacccactaaagatgaacgactaatccggctcgtgcgtagaggcatgtgcactgaccaa 186552  T

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Target: scaffold0011; HSP #2
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 94 - 236
Target Start/End: Complemental strand, 224426 - 224284
Alignment:
Q  94 tttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaac 193  Q
    |||||||| |||||||| | ||| |||||||||||||||||| ||||||||| |||||| ||| ||||||| ||| |||| |||  |||| || | ||||    
T  224426 tttcgcaccggtttccgacccaccaaagatggacgactaatccggctcgtgcgtagaggtatgtgcactgatcaaacgttattctccctgagattcgaac 224327  T
Q  194 ccggtatttcacggatacgtccttggtaggagctccttgccac 236  Q
    ||| ||||   || |||||||||| | ||  ||||||||||||    
T  224326 ccgatattctccgaatacgtccttagaagatgctccttgccac 224284  T

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Target: scaffold0050 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 232
Target Start/End: Complemental strand, 72708 - 72604
Alignment:
Q  127 cgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggagc 226  Q
    ||||||||| ||||  ||| | |||||||||||||||  ||||||||||||| | ||| ||| |||||||||| ||| | ||||||||||||| ||||||    
T  72708 cgactaatccggcttatgctttgaggcatgcgcactggtcaagcgttgttccccttggaaatcgaacccggta-ttccctgatacgtccttggaaggagc 72610  T
Q  227 tccttg 232  Q
    ||||||    
T  72609 tccttg 72604  T

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Target: scaffold0384 (Bit Score: 38; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 123 - 236
Target Start/End: Complemental strand, 6052 - 5940
Alignment:
Q  123 tggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtag 222  Q
    ||||||||||||  | ||| ||| |||||||||| |||||| |||||||||| ||| ||||| ||| |||||| ||||| | ||| |||| |||||  ||    
T  6052 tggacgactaattcgtctcatgcgtagaggcatgtgcactggccaagcgttg-tccccctggaaatcgaacccagtattccccgggtacgcccttgaaag 5954  T
Q  223 gagctccttgccac 236  Q
    ||||||||||||||    
T  5953 gagctccttgccac 5940  T

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Target: scaffold0223 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 127 - 195
Target Start/End: Complemental strand, 16955 - 16887
Alignment:
Q  127 cgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaaccc 195  Q
    ||||||||| ||||||||| ||||| ||| |||||||||||||||||||| | |||| |||| ||||||    
T  16955 cgactaatctggctcgtgcgtagagacatacgcactgaccaagcgttgtttcccctgagaattgaaccc 16887  T

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Target: scaffold0004 (Bit Score: 37; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 127 - 246
Target Start/End: Original strand, 95014 - 95131
Alignment:
Q  127 cgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaatagaacccggtatttcacggatacgtccttggtaggagc 226  Q
    ||||||||| ||||| ||| || ||||||||||||||  ||| |||||||  |||| | ||| ||||| |||||| | ||||||| | ||||| ||||||    
T  95014 cgactaatccggctcatgcgtaaaggcatgcgcactggtcaaacgttgtt--tcctagaaatcgaacctggtattccccggatactttcttggaaggagc 95111  T
Q  227 tccttgccaccggagcccaa 246  Q
    |||||||||  |||||||||    
T  95112 tccttgccattggagcccaa 95131  T

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Target: scaffold0004; HSP #2
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 80 - 219
Target Start/End: Original strand, 7822 - 7960
Alignment:
Q  80 tttttattcttgggtttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcct 179  Q
    |||||||| |||| ||||| || ||||||||   ||| |||| ||| |||||||||  |||  ||| ||||||||||||||||| ||||| ||| ||||     
T  7822 tttttatt-ttggctttcgtaccggtttccgatccaccaaaggtgggcgactaatccagctaatgcgtagaggcatgcgcactggccaagtgtttttccc 7920  T
Q  180 cctgggaatagaacccggtatttcacggatacgtccttgg 219  Q
    | |||||||  ||||||||||| | ||| |||||||||||    
T  7921 cttgggaatcaaacccggtattccccgggtacgtccttgg 7960  T

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Target: scaffold0155 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 189
Target Start/End: Complemental strand, 19364 - 19269
Alignment:
Q  94 tttcgcactggtttccggcacactaaagatggacgactaatcaggctcgtgcatagaggcatgcgcactgaccaagcgttgttcctcctgggaata 189  Q
    |||||||| ||||||||   ||||||  |||| ||||||||| ||||| ||| ||||||  ||||||||  |||||||||||||| ||| ||||||    
T  19364 tttcgcaccggtttccgatccactaataatggccgactaatccggctcatgcgtagaggtctgcgcactagccaagcgttgttccccctaggaata 19269  T

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Target: scaffold0013 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 153 - 199
Target Start/End: Complemental strand, 51781 - 51735
Alignment:
Q  153 catgcgcactgaccaagcgttgttcctcctgggaatagaacccggta 199  Q
    ||||||||||| ||||||||||||||  |||||||| ||||||||||    
T  51781 catgcgcactggccaagcgttgttccctctgggaatcgaacccggta 51735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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