View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11721_low_36 (Length: 454)
Name: NF11721_low_36
Description: NF11721
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11721_low_36 |
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Alignment Details
Target: chr7 (Bit Score: 428; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 428; E-Value: 0
Query Start/End: Original strand, 1 - 440
Target Start/End: Original strand, 4856023 - 4856462
Alignment:
| Q |
1 |
atctaatagttgtagcttcttctcctcataactatatatcatatgtttggtttctctagtattttaactacaaacaatgagaaaccatttcaacaataca |
100 |
Q |
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| T |
4856023 |
atctaatagttgtagcttcttctcctcataactatatatcatatgtttggtttctctagtattttaactacaaacaatgagaaaccatttcaacaataca |
4856122 |
T |
|
| Q |
101 |
tgacacctaatcattgcaatgtgttctcaatagcattttatcaacacatgacattattataaccaatgtcgaaaagaaattggaagatgatttcagaatt |
200 |
Q |
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| T |
4856123 |
tgacacctaatcattgcaatgtgttctcaatagcattttatcaacacatgacattattataaccaatgtcgaaaagaaattggaagatgatttcagaatt |
4856222 |
T |
|
| Q |
201 |
ctgaaatcctagcaattggggaaaattaggagaacaaaattgcaatgaaaacttatgcgtaagcgcaatcacaagaaatcgaacaaacagaatcaaaaac |
300 |
Q |
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| T |
4856223 |
ctgaaatcctagcaattggggaaaattaggagaacaaaattgcaatgaaaacttatgcgtaagagcaatcacaagaaatcgaacaaacagaatcaaaaac |
4856322 |
T |
|
| Q |
301 |
gaaaacgcaagactcgcacagattcgaagcaagaattgaacaagaattgtgaaactgaatcacgaaatgtaattacgcgagaaaatcgaaacacaaaaga |
400 |
Q |
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| T |
4856323 |
gaaaacgcaagactcgcacagattcgaagcaagaattgaacgagaattgtgaaactgaatcacgaaatgtaattacgcgagaaaatcgaaacacaaaaga |
4856422 |
T |
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| Q |
401 |
tgaattgcaataaggaaccctaagatttgggaaaaaggtg |
440 |
Q |
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| T |
4856423 |
tgaattgctataaggaaccctaagatttgggaaaaaggtg |
4856462 |
T |
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