View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF11721_low_94 (Length: 215)
Name: NF11721_low_94
Description: NF11721
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11721_low_94 |
 | |
|
Alignment Details
Target: chr3 (Bit Score: 95; Significance: 1e-46; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 101 - 199
Target Start/End: Complemental strand, 54850019 - 54849921
Alignment:
| Q |
101 |
cgtgatgaaaccaaaaacacactaacaagtaatgttcaatgcgaaaaattgcaaagattgaagatcaaagatgaatatcaacgaaagtgatgagtaacc |
199 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
54850019 |
cgtgatgaaaccaaaaacacactaacaagtaatgttcaatgcgaaaaattgcaaagattgaagatcaaagatgaatatcaacgaaagtgataagtaacc |
54849921 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University