View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11723_high_23 (Length: 262)
Name: NF11723_high_23
Description: NF11723
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11723_high_23 |
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Alignment Details
Target: chr7 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 21 - 250
Target Start/End: Complemental strand, 38793738 - 38793508
Alignment:
| Q |
21 |
aaaagcctatataa-tcgttcttgtctttcttccaaacaaaagcaaaatagtacaatgcaatgagcaaaactatgtgtgaaataaacaagaactttgttt |
119 |
Q |
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| T |
38793738 |
aaaagcctatataaatcgttcttgtctttcttccaaacaaaagcaaaatagtacaatgcaatgagcaaaactatgtgtgaaataaacaagaactttgttt |
38793639 |
T |
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| Q |
120 |
gtagcaataagttggacattgacaatgacatcattcaactattaaattactttcctaaataagctattattaaatgacaaagtgacaccattaaagcttt |
219 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
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| T |
38793638 |
gtagcactaagttggacattgacaatgacatcattcaactattaaattactttcctaaataagctattattaaatgacaaagtgacaccattaaagctct |
38793539 |
T |
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| Q |
220 |
gagtgtcacaaacaaaattttaagttttcat |
250 |
Q |
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||||||||||||||||||||||||||||||| |
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| T |
38793538 |
gagtgtcacaaacaaaattttaagttttcat |
38793508 |
T |
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