View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11723_high_25 (Length: 247)
Name: NF11723_high_25
Description: NF11723
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11723_high_25 |
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Alignment Details
Target: chr3 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 12 - 232
Target Start/End: Original strand, 46925335 - 46925554
Alignment:
| Q |
12 |
atgaaccaaacaaaaaggaaggaaaaataaaccaacacaagatgctaggaagcaataaatattgcaccagtgaaaatgagaaaaactcaaccaaaaagag |
111 |
Q |
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| T |
46925335 |
atgaaccaaacaaaaaggaaggaaaaataaaccaacacaagatgctaggaagcaataaatattgcaccagtgaaaatgagaaaaactcaaccaaaaagag |
46925434 |
T |
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| Q |
112 |
aagttgaaccaaaacatttatagtttggtaatttaattttgatctttaatcttagtactaccaaaatccacctacatcaatagattgtgaacaaagataa |
211 |
Q |
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| T |
46925435 |
aagttgaacc-aaacatttaaagtttggtaatttaattttgatctttaatcttagtactaccaaaatccacctacatcaatagattgtgaacaaagataa |
46925533 |
T |
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| Q |
212 |
tattggcactaagttatatgt |
232 |
Q |
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||||||||||||||||||||| |
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| T |
46925534 |
tattggcactaagttatatgt |
46925554 |
T |
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