View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11723_low_31 (Length: 215)
Name: NF11723_low_31
Description: NF11723
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11723_low_31 |
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Alignment Details
Target: chr7 (Bit Score: 76; Significance: 3e-35; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 21 - 96
Target Start/End: Original strand, 45681749 - 45681824
Alignment:
| Q |
21 |
atagagggtaaggtgccaccttaattcttgtttgaaaaaatgttgtacaagaaacatgcatgtatgggaaggactg |
96 |
Q |
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| T |
45681749 |
atagagggtaaggtgccaccttaattcttgtttgaaaaaatgttgtacaagaaacatgcatgtatgggaaggactg |
45681824 |
T |
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Target: chr7; HSP #2
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 120 - 190
Target Start/End: Original strand, 45681878 - 45681948
Alignment:
| Q |
120 |
gaaccttagtcattgaaggtaggagtcaataggtatgtcaagttctcaaattgaaccgtcctaataatcaa |
190 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45681878 |
gaaccttagtcattgaaggtaggagtcaataggtatgtcaagttctcaaattgaaccgtcctaataatcaa |
45681948 |
T |
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