View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11724_low_16 (Length: 247)
Name: NF11724_low_16
Description: NF11724
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11724_low_16 |
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Alignment Details
Target: chr1 (Bit Score: 132; Significance: 1e-68; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 89 - 236
Target Start/End: Original strand, 2175706 - 2175852
Alignment:
| Q |
89 |
tattgttagcgctcaatgatcaagaaaacatatcttacgtacactttcacaaattattttaactaattcaatattttttatttgtagttacaacccataa |
188 |
Q |
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| T |
2175706 |
tattgttagcgctcaatgatcaagaaaacatatct-acgtacactttcacaaattattttaactaattcaatattttttatttgtagttacaacccagaa |
2175804 |
T |
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| Q |
189 |
atattaagttacccaaactattttaaatttaattataaatcataccct |
236 |
Q |
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| T |
2175805 |
atattaagttacccaaactatttgaaatttaattataaatcataccct |
2175852 |
T |
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