View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11726_high_8 (Length: 252)
Name: NF11726_high_8
Description: NF11726
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11726_high_8 |
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Alignment Details
Target: chr2 (Bit Score: 221; Significance: 1e-122; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 20 - 248
Target Start/End: Original strand, 1357004 - 1357232
Alignment:
| Q |
20 |
gaggtttccaagattctttcacaaaatggtcactttgtcacactcatatctactccttcaatcatagatcgtcttcctaaactctcacaaaccctttcac |
119 |
Q |
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| T |
1357004 |
gaggtttccaagattctttcacaaaatggtcactttgtcacactcatatctactccttcaatcatagatcgtcttcctaaactctcacaaaccctttcac |
1357103 |
T |
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| Q |
120 |
catttgttaatctcatcaaacttcccttatcatcttacattgacaaaaaccatcttccaacaaatgcagattcaaccatggacattccctccaacaaact |
219 |
Q |
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| T |
1357104 |
cattttttaatctcatcaaacttcccttatcatcttacattgacaaaaaccatcttccaacaaatgcagattcaaccatggacattccctccaacaaact |
1357203 |
T |
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| Q |
220 |
ctattaccttaaactagcctatgcttctc |
248 |
Q |
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| T |
1357204 |
ctattaccttaaactagcctatgattctc |
1357232 |
T |
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