View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11728_low_4 (Length: 432)

Name: NF11728_low_4
Description: NF11728
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11728_low_4
NF11728_low_4
[»] chr5 (38 HSPs)
chr5 (1-417)||(26609244-26609660)
chr5 (216-330)||(21542008-21542122)
chr5 (249-322)||(28588674-28588747)
chr5 (245-317)||(3966494-3966566)
chr5 (256-328)||(27144443-27144515)
chr5 (256-314)||(9449463-9449521)
chr5 (248-317)||(11685930-11685999)
chr5 (267-316)||(35017029-35017078)
chr5 (246-307)||(36838544-36838605)
chr5 (249-317)||(33178016-33178084)
chr5 (267-317)||(14674260-14674310)
chr5 (249-311)||(16203795-16203857)
chr5 (251-309)||(23220982-23221040)
chr5 (244-321)||(19429419-19429496)
chr5 (245-317)||(2436913-2436985)
chr5 (249-317)||(6247613-6247681)
chr5 (245-313)||(19579696-19579764)
chr5 (246-301)||(6471886-6471941)
chr5 (245-300)||(13287395-13287450)
chr5 (239-330)||(15410438-15410529)
chr5 (216-335)||(21522723-21522842)
chr5 (216-335)||(21533289-21533408)
chr5 (279-330)||(41995449-41995500)
chr5 (244-298)||(14873527-14873581)
chr5 (249-335)||(21191056-21191142)
chr5 (249-307)||(30502388-30502446)
chr5 (249-307)||(30542731-30542789)
chr5 (216-310)||(32766910-32767004)
chr5 (217-335)||(36642730-36642848)
chr5 (244-317)||(6035474-6035546)
chr5 (244-317)||(22423807-22423880)
chr5 (244-317)||(31084314-31084387)
chr5 (244-317)||(39698532-39698605)
chr5 (244-308)||(5894828-5894892)
chr5 (267-335)||(22013387-22013455)
chr5 (279-335)||(26716117-26716173)
chr5 (279-335)||(26985857-26985913)
chr5 (249-328)||(43564863-43564940)
[»] chr1 (56 HSPs)
chr1 (198-316)||(9828036-9828154)
chr1 (245-335)||(7918207-7918297)
chr1 (246-335)||(10572586-10572675)
chr1 (244-313)||(25361881-25361950)
chr1 (238-330)||(17754289-17754381)
chr1 (249-317)||(22881616-22881684)
chr1 (198-317)||(40917742-40917859)
chr1 (250-317)||(2896122-2896189)
chr1 (249-316)||(14332642-14332709)
chr1 (250-317)||(36878452-36878519)
chr1 (279-344)||(609488-609553)
chr1 (244-317)||(1486704-1486777)
chr1 (244-338)||(5944251-5944347)
chr1 (216-309)||(9629867-9629960)
chr1 (216-329)||(27471533-27471646)
chr1 (267-335)||(398783-398851)
chr1 (245-317)||(6427341-6427413)
chr1 (249-313)||(39953146-39953210)
chr1 (245-316)||(24577182-24577253)
chr1 (250-328)||(5898267-5898345)
chr1 (267-317)||(17831549-17831599)
chr1 (245-347)||(20157346-20157448)
chr1 (253-319)||(34257914-34257980)
chr1 (267-317)||(34298427-34298477)
chr1 (250-316)||(43492495-43492561)
chr1 (244-298)||(44482240-44482294)
chr1 (244-330)||(47989476-47989561)
chr1 (244-317)||(113290-113363)
chr1 (249-301)||(29229468-29229521)
chr1 (244-301)||(34712378-34712435)
chr1 (249-330)||(41877470-41877551)
chr1 (269-321)||(10474997-10475049)
chr1 (267-335)||(14359540-14359607)
chr1 (249-317)||(37598823-37598890)
chr1 (249-317)||(46348383-46348451)
chr1 (244-315)||(5376495-5376566)
chr1 (263-338)||(15641044-15641119)
chr1 (249-316)||(22515887-22515954)
chr1 (244-315)||(38503313-38503384)
chr1 (251-317)||(13997874-13997940)
chr1 (198-300)||(16164264-16164366)
chr1 (246-296)||(25272494-25272544)
chr1 (267-317)||(32461481-32461531)
chr1 (246-308)||(34371714-34371775)
chr1 (249-319)||(39130767-39130837)
chr1 (249-315)||(52903242-52903308)
chr1 (251-300)||(1864882-1864931)
chr1 (249-330)||(9709798-9709879)
chr1 (251-316)||(10233245-10233310)
chr1 (267-316)||(12443478-12443527)
chr1 (250-327)||(19562622-19562699)
chr1 (279-335)||(1262857-1262913)
chr1 (250-330)||(23636050-23636130)
chr1 (265-317)||(30359379-30359431)
chr1 (249-301)||(40181878-40181930)
chr1 (267-335)||(48450605-48450673)
[»] chr7 (52 HSPs)
chr7 (244-335)||(15902795-15902886)
chr7 (244-330)||(1433432-1433518)
chr7 (216-317)||(32308111-32308212)
chr7 (198-321)||(24339629-24339752)
chr7 (190-319)||(11665381-11665510)
chr7 (244-330)||(7328686-7328772)
chr7 (245-335)||(27945014-27945104)
chr7 (246-315)||(10042930-10042999)
chr7 (246-317)||(6630909-6630980)
chr7 (249-328)||(20549771-20549850)
chr7 (244-330)||(22602705-22602791)
chr7 (249-330)||(8090025-8090106)
chr7 (256-317)||(22868033-22868094)
chr7 (229-321)||(29787351-29787441)
chr7 (279-330)||(5307238-5307289)
chr7 (250-313)||(5835242-5835305)
chr7 (249-316)||(37870885-37870952)
chr7 (252-330)||(2425736-2425814)
chr7 (244-330)||(26329377-26329463)
chr7 (252-317)||(2948674-2948739)
chr7 (245-330)||(5235964-5236049)
chr7 (248-317)||(9408333-9408402)
chr7 (250-315)||(19206043-19206108)
chr7 (249-330)||(26733282-26733363)
chr7 (246-330)||(30731015-30731097)
chr7 (249-301)||(3721100-3721152)
chr7 (250-338)||(11061077-11061165)
chr7 (244-300)||(16341504-16341560)
chr7 (251-323)||(41020481-41020553)
chr7 (248-315)||(2034434-2034501)
chr7 (244-311)||(5548673-5548740)
chr7 (250-329)||(22484004-22484083)
chr7 (251-310)||(27093415-27093474)
chr7 (251-310)||(27184827-27184886)
chr7 (246-317)||(49107812-49107882)
chr7 (244-338)||(7438676-7438770)
chr7 (234-308)||(8160416-8160490)
chr7 (267-317)||(25481893-25481943)
chr7 (244-313)||(7758317-7758386)
chr7 (245-338)||(18013070-18013163)
chr7 (231-316)||(23128643-23128728)
chr7 (220-301)||(26033432-26033513)
chr7 (279-328)||(35861944-35861993)
chr7 (252-328)||(3520345-3520421)
chr7 (253-317)||(4008568-4008632)
chr7 (253-317)||(4013960-4014024)
chr7 (249-317)||(9482925-9482993)
chr7 (279-335)||(11722128-11722184)
chr7 (249-317)||(15680800-15680868)
chr7 (267-335)||(24105651-24105719)
chr7 (249-309)||(32287463-32287523)
chr7 (250-314)||(37742517-37742581)
[»] scaffold0003 (1 HSPs)
scaffold0003 (198-350)||(241552-241704)
[»] chr8 (29 HSPs)
chr8 (198-317)||(15816078-15816197)
chr8 (198-335)||(22651949-22652086)
chr8 (247-316)||(39954277-39954346)
chr8 (249-317)||(4786338-4786406)
chr8 (251-338)||(7658433-7658520)
chr8 (246-313)||(11927083-11927150)
chr8 (249-316)||(13844596-13844663)
chr8 (244-335)||(24362197-24362288)
chr8 (270-321)||(27101502-27101553)
chr8 (246-315)||(11944658-11944727)
chr8 (220-316)||(2572027-2572123)
chr8 (249-316)||(34897077-34897144)
chr8 (216-335)||(22197709-22197828)
chr8 (245-301)||(25172694-25172750)
chr8 (244-316)||(29447105-29447177)
chr8 (252-316)||(31236580-31236644)
chr8 (216-335)||(29510271-29510390)
chr8 (249-300)||(33405384-33405435)
chr8 (250-316)||(14134691-14134757)
chr8 (249-335)||(20873042-20873128)
chr8 (267-317)||(36450772-36450822)
chr8 (248-309)||(7472514-7472575)
chr8 (248-301)||(8342979-8343032)
chr8 (244-301)||(34222954-34223011)
chr8 (282-338)||(4673458-4673514)
chr8 (257-301)||(14731719-14731763)
chr8 (244-308)||(16641969-16642033)
chr8 (280-316)||(24196628-24196664)
chr8 (249-317)||(31109518-31109586)
[»] chr6 (60 HSPs)
chr6 (190-317)||(16766688-16766815)
chr6 (244-335)||(17327650-17327741)
chr6 (245-335)||(9027151-9027241)
chr6 (249-350)||(34595092-34595193)
chr6 (249-317)||(5732510-5732578)
chr6 (249-317)||(7265593-7265661)
chr6 (249-317)||(19040343-19040411)
chr6 (249-319)||(9629372-9629442)
chr6 (251-321)||(26178683-26178753)
chr6 (234-316)||(26562681-26562763)
chr6 (245-330)||(7086773-7086858)
chr6 (217-330)||(8365487-8365600)
chr6 (267-316)||(10842524-10842573)
chr6 (245-301)||(9025490-9025546)
chr6 (245-317)||(10770670-10770742)
chr6 (244-308)||(10888969-10889033)
chr6 (279-335)||(16833281-16833337)
chr6 (245-317)||(19044455-19044527)
chr6 (249-321)||(20371110-20371182)
chr6 (249-317)||(33001289-33001357)
chr6 (245-328)||(34290075-34290156)
chr6 (248-327)||(34447359-34447436)
chr6 (250-317)||(7938107-7938174)
chr6 (246-301)||(9195751-9195806)
chr6 (251-330)||(9658857-9658936)
chr6 (267-338)||(25096393-25096464)
chr6 (198-260)||(3209436-3209498)
chr6 (247-313)||(7151407-7151473)
chr6 (250-316)||(13360373-13360439)
chr6 (267-317)||(17341682-17341732)
chr6 (267-317)||(17841607-17841657)
chr6 (244-313)||(6665208-6665277)
chr6 (244-317)||(32313395-32313468)
chr6 (249-317)||(853859-853927)
chr6 (267-335)||(8776991-8777059)
chr6 (249-300)||(403864-403915)
chr6 (258-330)||(1532216-1532290)
chr6 (267-330)||(1681736-1681799)
chr6 (249-316)||(7377971-7378038)
chr6 (244-315)||(9107365-9107436)
chr6 (244-335)||(12696297-12696388)
chr6 (245-316)||(21395304-21395374)
chr6 (249-315)||(7801156-7801222)
chr6 (245-330)||(8805570-8805653)
chr6 (217-322)||(10339093-10339199)
chr6 (244-330)||(34073342-34073428)
chr6 (249-313)||(7027236-7027301)
chr6 (293-338)||(18803555-18803600)
chr6 (244-313)||(32320664-32320733)
chr6 (246-330)||(3398597-3398680)
chr6 (198-306)||(7248360-7248468)
chr6 (245-317)||(7930296-7930368)
chr6 (249-317)||(7977830-7977898)
chr6 (249-317)||(7996378-7996446)
chr6 (249-317)||(8022355-8022423)
chr6 (248-300)||(9617442-9617494)
chr6 (279-335)||(10649301-10649357)
chr6 (250-330)||(11784217-11784297)
chr6 (250-330)||(13851714-13851794)
chr6 (249-313)||(21924935-21924999)
[»] scaffold0044 (1 HSPs)
scaffold0044 (216-317)||(53171-53272)
[»] chr3 (43 HSPs)
chr3 (246-335)||(11665917-11666006)
chr3 (198-322)||(4987240-4987364)
chr3 (267-335)||(25064882-25064950)
chr3 (216-319)||(8039802-8039905)
chr3 (249-330)||(8383235-8383316)
chr3 (217-350)||(41961618-41961751)
chr3 (247-317)||(2620053-2620121)
chr3 (249-335)||(55401048-55401134)
chr3 (249-310)||(7928448-7928509)
chr3 (267-328)||(10954932-10954993)
chr3 (249-330)||(16000016-16000097)
chr3 (256-320)||(32804547-32804611)
chr3 (228-316)||(34910309-34910397)
chr3 (249-316)||(18426941-18427008)
chr3 (249-316)||(49505154-49505221)
chr3 (244-330)||(9800018-9800104)
chr3 (249-335)||(10335286-10335372)
chr3 (244-310)||(11313795-11313861)
chr3 (267-321)||(11493379-11493433)
chr3 (218-316)||(14209105-14209203)
chr3 (255-321)||(29508431-29508497)
chr3 (267-316)||(12703999-12704048)
chr3 (246-307)||(17005616-17005677)
chr3 (249-317)||(21479109-21479177)
chr3 (246-330)||(28678281-28678365)
chr3 (246-297)||(15314873-15314924)
chr3 (198-317)||(34185072-34185191)
chr3 (250-321)||(48202270-48202341)
chr3 (267-317)||(10268504-10268554)
chr3 (238-328)||(14829670-14829759)
chr3 (279-317)||(24633757-24633795)
chr3 (279-317)||(26290362-26290400)
chr3 (246-316)||(28812507-28812577)
chr3 (247-317)||(28917992-28918062)
chr3 (248-301)||(1509546-1509599)
chr3 (244-301)||(25948882-25948939)
chr3 (245-313)||(1550135-1550203)
chr3 (249-317)||(8587021-8587089)
chr3 (249-317)||(10318035-10318102)
chr3 (246-330)||(10455768-10455852)
chr3 (244-316)||(16192745-16192817)
chr3 (244-316)||(22774065-22774137)
chr3 (244-316)||(49651781-49651853)
[»] chr4 (33 HSPs)
chr4 (249-335)||(12895274-12895360)
chr4 (244-330)||(40742569-40742655)
chr4 (245-330)||(5832690-5832775)
chr4 (217-330)||(19482646-19482759)
chr4 (244-309)||(5775353-5775418)
chr4 (216-316)||(22234857-22234958)
chr4 (257-317)||(36635315-36635375)
chr4 (250-317)||(35157986-35158053)
chr4 (254-317)||(40613441-40613504)
chr4 (244-314)||(13134444-13134514)
chr4 (250-307)||(7214523-7214580)
chr4 (249-321)||(2361975-2362047)
chr4 (267-311)||(17446068-17446112)
chr4 (200-316)||(24613652-24613768)
chr4 (249-313)||(54580023-54580087)
chr4 (244-311)||(11931277-11931344)
chr4 (249-316)||(36409512-36409578)
chr4 (249-316)||(36423678-36423744)
chr4 (250-300)||(21720508-21720558)
chr4 (249-335)||(23292986-23293072)
chr4 (216-306)||(30982845-30982935)
chr4 (248-317)||(35723383-35723453)
chr4 (249-310)||(8423718-8423779)
chr4 (253-322)||(17344486-17344555)
chr4 (249-350)||(21945461-21945562)
chr4 (216-301)||(30838217-30838302)
chr4 (243-316)||(35952611-35952684)
chr4 (217-317)||(903913-904013)
chr4 (245-316)||(4099953-4100027)
chr4 (249-313)||(4672085-4672149)
chr4 (249-317)||(15029756-15029824)
chr4 (216-288)||(19312355-19312427)
chr4 (267-335)||(40481610-40481677)
[»] chr2 (33 HSPs)
chr2 (246-330)||(21782817-21782899)
chr2 (249-317)||(31018581-31018649)
chr2 (246-338)||(36756341-36756433)
chr2 (244-330)||(34784977-34785063)
chr2 (218-308)||(44860320-44860410)
chr2 (244-317)||(12668418-12668491)
chr2 (257-316)||(21616754-21616813)
chr2 (234-307)||(2665875-2665946)
chr2 (198-308)||(4207857-4207966)
chr2 (245-321)||(2331781-2331855)
chr2 (250-311)||(18276518-18276579)
chr2 (252-317)||(23718017-23718082)
chr2 (252-317)||(24105689-24105754)
chr2 (243-300)||(30527589-30527646)
chr2 (249-317)||(20242727-20242795)
chr2 (201-313)||(27286244-27286356)
chr2 (249-313)||(28677904-28677967)
chr2 (249-301)||(34691805-34691857)
chr2 (249-301)||(34714217-34714269)
chr2 (249-317)||(37411244-37411312)
chr2 (249-335)||(19536397-19536484)
chr2 (247-330)||(20539672-20539755)
chr2 (267-306)||(25846743-25846782)
chr2 (217-316)||(26769503-26769602)
chr2 (267-314)||(30335411-30335458)
chr2 (249-303)||(5367197-5367251)
chr2 (275-317)||(12464875-12464917)
chr2 (250-311)||(36409630-36409689)
chr2 (249-338)||(18421933-18422022)
chr2 (245-302)||(18622612-18622669)
chr2 (245-309)||(24975321-24975385)
chr2 (217-301)||(30717498-30717582)
chr2 (217-273)||(35056903-35056959)
[»] scaffold1528 (1 HSPs)
scaffold1528 (238-330)||(1013-1105)
[»] scaffold0036 (1 HSPs)
scaffold0036 (246-316)||(9744-9814)
[»] scaffold0223 (1 HSPs)
scaffold0223 (244-335)||(20145-20236)
[»] scaffold0053 (1 HSPs)
scaffold0053 (249-335)||(8771-8857)
[»] scaffold0039 (1 HSPs)
scaffold0039 (218-316)||(84942-85040)
[»] scaffold0020 (1 HSPs)
scaffold0020 (245-315)||(135308-135378)
[»] scaffold0361 (1 HSPs)
scaffold0361 (267-316)||(14522-14571)
[»] scaffold0227 (1 HSPs)
scaffold0227 (267-316)||(7329-7378)
[»] scaffold0085 (1 HSPs)
scaffold0085 (279-328)||(26373-26422)
[»] scaffold0011 (1 HSPs)
scaffold0011 (250-315)||(17750-17815)
[»] scaffold0306 (1 HSPs)
scaffold0306 (270-317)||(13391-13438)
[»] scaffold0171 (1 HSPs)
scaffold0171 (244-335)||(23393-23484)
[»] scaffold0152 (1 HSPs)
scaffold0152 (270-317)||(21889-21936)
[»] scaffold0027 (1 HSPs)
scaffold0027 (267-338)||(46652-46723)
[»] scaffold0236 (1 HSPs)
scaffold0236 (246-300)||(25765-25819)
[»] scaffold0103 (1 HSPs)
scaffold0103 (267-317)||(51802-51852)
[»] scaffold0019 (1 HSPs)
scaffold0019 (198-317)||(71714-71835)
[»] scaffold0004 (1 HSPs)
scaffold0004 (267-317)||(92798-92848)
[»] scaffold0018 (1 HSPs)
scaffold0018 (282-335)||(178852-178905)
[»] scaffold0246 (1 HSPs)
scaffold0246 (267-335)||(19549-19616)
[»] scaffold0022 (1 HSPs)
scaffold0022 (250-330)||(90821-90901)


Alignment Details
Target: chr5 (Bit Score: 381; Significance: 0; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 381; E-Value: 0
Query Start/End: Original strand, 1 - 417
Target Start/End: Complemental strand, 26609660 - 26609244
Alignment:
Q  1 aatcacaaagtcactcctcctggcactgaattgtcaagaccttttcaagaatgatttcttttcattggtcttagttggatcatacacgtttggcactcct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26609660 aatcacaaagtcactcctcctggcactgaattgtcaagaccttttcaagaatgatttcttttcattggtcttagttggatcatacacgtttggcactcct 26609561  T
Q  101 ccttttgttgctgaccttggctttaatgatcatatacagttaatttttatatatttcaaagtatcataatcattgttagcttattatatgacattcatcg 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  26609560 ccttttgttgctgaccttggctttaatgatcatatacagttaatttttatatatttcaaagtatcataatcattgttagcttgttatatgacattcatcg 26609461  T
Q  201 gattagacatgttcgggtgtcggacgcgtgtcatgttcaacagcgacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattatta 300  Q
    |||||||||||||||| ||||||||||||||| |||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  26609460 gattagacatgttcggatgtcggacgcgtgtcgtgttcaacagcgacacgataccgacacaaatagttgcactaaatcatgtgattttatcaaattatta 26609361  T
Q  301 gtggtgtcggcgtgtcaatgtttgtgtcgtttccgatgcctgtgcttcatttagagatgttataaaacgtttaattttttagcttacctaataagttgtg 400  Q
    |||||||||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  26609360 gtggtgtcggtgtgtcaatgtttatgtcgtttccgatgcatgtgcttcatttagagatgttataaaacgtttaattttttagcttaccttataagttgtg 26609261  T
Q  401 gtggcagtaatggttat 417  Q
    |||||||||||||||||    
T  26609260 gtggcagtaatggttat 26609244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 216 - 330
Target Start/End: Complemental strand, 21542122 - 21542008
Alignment:
Q  216 ggtgtcggacgcgtgtcatgttcaacagcgacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgt 315  Q
    |||||||||| |||||| ||| | ||| |||||||||||||||||   || ||||||| ||| |||| || || | ||||||||||| |||||||| |||    
T  21542122 ggtgtcggacacgtgtcgtgtccgacaccgacacgacaccgacacttgtaattacactgaattatgttatctttttaaattattagttgtgtcggcatgt 21542023  T
Q  316 caatgtttgtgtcgt 330  Q
    |||||| ||||||||    
T  21542022 caatgtctgtgtcgt 21542008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 249 - 322
Target Start/End: Original strand, 28588674 - 28588747
Alignment:
Q  249 cgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtcaatgtt 322  Q
    ||||||||||||  ||| ||||||| ||| |||||||||| |||||||||||  ||||||||||||||||||||    
T  28588674 cgacaccgacacctataattacactgaattatgtgattttctcaaattattaccggtgtcggcgtgtcaatgtt 28588747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 245 - 317
Target Start/End: Complemental strand, 3966566 - 3966494
Alignment:
Q  245 gacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtca 317  Q
    ||||||||||||||||| ||| ||||||| |||  ||||||||| |||||||||||| ||||||||| |||||    
T  3966566 gacacgacaccgacacatataattacactgaattgtgtgattttctcaaattattagcggtgtcggcatgtca 3966494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 256 - 328
Target Start/End: Complemental strand, 27144515 - 27144443
Alignment:
Q  256 gacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtcaatgtttgtgtc 328  Q
    |||||| ||| ||||||||||| |||||||||  |||||||||||| ||||||||||||||| ||| ||||||    
T  27144515 gacacatataattacactaaattatgtgatttcctcaaattattagcggtgtcggcgtgtcagtgtctgtgtc 27144443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 256 - 314
Target Start/End: Complemental strand, 9449521 - 9449463
Alignment:
Q  256 gacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtg 314  Q
    |||||||||||||||| | ||| |||||||||| ||||||||||| |||||||||||||    
T  9449521 gacacaaatagttacattgaattatgtgattttctcaaattattattggtgtcggcgtg 9449463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 248 - 317
Target Start/End: Complemental strand, 11685999 - 11685930
Alignment:
Q  248 acgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtca 317  Q
    |||||||||||||| ||| ||||||||||| ||| || ||| |||||||||||| ||||||||| |||||    
T  11685999 acgacaccgacacatataattacactaaattatgcgactttctcaaattattagcggtgtcggcatgtca 11685930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 267 - 316
Target Start/End: Complemental strand, 35017078 - 35017029
Alignment:
Q  267 ttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtc 316  Q
    ||||||||||| |||||||||| |||||||||||||||| ||||||||||    
T  35017078 ttacactaaattatgtgattttctcaaattattagtggtttcggcgtgtc 35017029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 246 - 307
Target Start/End: Complemental strand, 36838605 - 36838544
Alignment:
Q  246 acacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgt 307  Q
    |||||||||||||||| ||| ||||||||||| |||| ||||| |||||||||||| |||||    
T  36838605 acacgacaccgacacatataattacactaaattatgtaattttctcaaattattagcggtgt 36838544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 249 - 317
Target Start/End: Complemental strand, 33178084 - 33178016
Alignment:
Q  249 cgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtca 317  Q
    ||||||||||||   || ||||||||||| |||||||||| | ||||||||||| ||||||||||||||    
T  33178084 cgacaccgacacttgtaattacactaaattatgtgatttttttaaattattagttgtgtcggcgtgtca 33178016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 267 - 317
Target Start/End: Complemental strand, 14674310 - 14674260
Alignment:
Q  267 ttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtca 317  Q
    ||||||||||| |||||||||| ||||||||||||  ||||||||||||||    
T  14674310 ttacactaaattatgtgattttttcaaattattagctgtgtcggcgtgtca 14674260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 249 - 311
Target Start/End: Original strand, 16203795 - 16203857
Alignment:
Q  249 cgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggc 311  Q
    ||||||||||||| ||| ||||||||||| ||| |||||| ||||||||||||  ||||||||    
T  16203795 cgacaccgacacatataattacactaaattatgagattttctcaaattattagcagtgtcggc 16203857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 251 - 309
Target Start/End: Complemental strand, 23221040 - 23220982
Alignment:
Q  251 acaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcg 309  Q
    ||||||||||| ||  | ||||||||| ||||||||||||||||||||||| |||||||    
T  23221040 acaccgacacatatgataacactaaattatgtgattttatcaaattattagcggtgtcg 23220982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 244 - 321
Target Start/End: Complemental strand, 19429496 - 19429419
Alignment:
Q  244 cgacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtcaatgt 321  Q
    |||||||||| ||||||| ||| ||||||||| | |||||||||| |||||||||||    ||||||| |||||||||    
T  19429496 cgacacgacagcgacacagatatttacactaagttatgtgattttctcaaattattaacattgtcggcatgtcaatgt 19429419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 317
Target Start/End: Complemental strand, 2436985 - 2436913
Alignment:
Q  245 gacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtca 317  Q
    ||||||||||||||||| ||| | |||   ||| ||||||||||  ||||||||||| |||||||||||||||    
T  2436985 gacacgacaccgacacatataatcacaacgaattatgtgatttttgcaaattattagcggtgtcggcgtgtca 2436913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 317
Target Start/End: Complemental strand, 6247681 - 6247613
Alignment:
Q  249 cgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtca 317  Q
    ||||||||||||   || ||||||| ||| |||||||||| ||||||||||||  ||||||||||||||    
T  6247681 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagatgtgtcggcgtgtca 6247613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 313
Target Start/End: Complemental strand, 19579764 - 19579696
Alignment:
Q  245 gacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgt 313  Q
    ||||||||||||||||   || || |||||||| |||||||||| ||||||||||||  ||||||||||    
T  19579764 gacacgacaccgacacttgtaattgcactaaattatgtgattttctcaaattattagctgtgtcggcgt 19579696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 246 - 301
Target Start/End: Original strand, 6471886 - 6471941
Alignment:
Q  246 acacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattag 301  Q
    |||||||||| ||||| ||| ||||||| ||| |||||||||| ||||||||||||    
T  6471886 acacgacacccacacatataattacactgaattatgtgattttctcaaattattag 6471941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 245 - 300
Target Start/End: Original strand, 13287395 - 13287450
Alignment:
Q  245 gacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattatta 300  Q
    ||||||||||||||||   |||||||||| ||| |||||||||| |||||||||||    
T  13287395 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattatta 13287450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 239 - 330
Target Start/End: Original strand, 15410438 - 15410529
Alignment:
Q  239 aacagcgacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtcaatgtttgtgtcgt 330  Q
    |||| |||||| ||||| ||||| ||  ||||||| |||||| | ||||| | |||||||||| ||||||||||||||| |||  |||||||    
T  15410438 aacatcgacacaacaccaacacatatgattacactgaatcatataattttcttaaattattagcggtgtcggcgtgtcagtgtccgtgtcgt 15410529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 335
Target Start/End: Complemental strand, 21522842 - 21522723
Alignment:
Q  216 ggtgtcggacgcgtgtcatgttcaacagcgacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgt 315  Q
    |||| ||||| |||||| ||| | ||| ||||||||||||||||    || ||||||| ||| |||| ||||| | ||||||||||  ||||||||||||    
T  21522842 ggtgccggacacgtgtcgtgtccgacaccgacacgacaccgacaattgtaattacactgaattatgttattttttaaaattattagctgtgtcggcgtgt 21522743  T
Q  316 caatgtttgtgtcgtttccg 335  Q
    || |||  ||||||| ||||    
T  21522742 cagtgtccgtgtcgtgtccg 21522723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 335
Target Start/End: Complemental strand, 21533408 - 21533289
Alignment:
Q  216 ggtgtcggacgcgtgtcatgttcaacagcgacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgt 315  Q
    |||| ||||| |||||| ||| | ||| ||||||||||||||||    || ||||||| ||| |||| ||||| | ||||||||||  ||||||||||||    
T  21533408 ggtgccggacacgtgtcgtgtccgacaccgacacgacaccgacaattgtaattacactgaattatgttattttttaaaattattagctgtgtcggcgtgt 21533309  T
Q  316 caatgtttgtgtcgtttccg 335  Q
    || |||  ||||||| ||||    
T  21533308 cagtgtccgtgtcgtgtccg 21533289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 279 - 330
Target Start/End: Complemental strand, 41995500 - 41995449
Alignment:
Q  279 atgtgattttatcaaattattagtggtgtcggcgtgtcaatgtttgtgtcgt 330  Q
    |||||||||| || |||||||||| |||||||||||||| ||| ||||||||    
T  41995500 atgtgattttttcgaattattagttgtgtcggcgtgtcagtgtctgtgtcgt 41995449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 244 - 298
Target Start/End: Complemental strand, 14873581 - 14873527
Alignment:
Q  244 cgacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattat 298  Q
    ||||| |||||||||||| ||| ||||||||||| ||||| |||| |||||||||    
T  14873581 cgacatgacaccgacacatataattacactaaattatgtgcttttctcaaattat 14873527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 249 - 335
Target Start/End: Original strand, 21191056 - 21191142
Alignment:
Q  249 cgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtcaatgtttgtgtcgtttccg 335  Q
    ||||||||||||   || ||||||| ||| |||||||||| ||||||||||||  |||||||| ||||| |||  ||||||| ||||    
T  21191056 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcatgtcagtgtccgtgtcgtgtccg 21191142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 249 - 307
Target Start/End: Original strand, 30502388 - 30502446
Alignment:
Q  249 cgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgt 307  Q
    ||||||||||||| ||| ||||||| ||| | |||||||| |||||||||||| |||||    
T  30502388 cgacaccgacacatataattacactgaattaagtgattttctcaaattattagcggtgt 30502446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 249 - 307
Target Start/End: Original strand, 30542731 - 30542789
Alignment:
Q  249 cgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgt 307  Q
    ||||||||||||| ||| ||||||| ||| | |||||||| |||||||||||| |||||    
T  30542731 cgacaccgacacatataattacactgaattaagtgattttctcaaattattagcggtgt 30542789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 216 - 310
Target Start/End: Original strand, 32766910 - 32767004
Alignment:
Q  216 ggtgtcggacgcgtgtcatgttcaacagcgacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcgg 310  Q
    |||||||||| |||||| | ||| ||| |||||||||||  ||||| ||| ||||| | |||  || |||||| |||||||||||| ||||||||    
T  32766910 ggtgtcggacacgtgtcgttttcgacaccgacacgacacaaacacatataattacattgaattgtgcgattttctcaaattattagcggtgtcgg 32767004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 217 - 335
Target Start/End: Original strand, 36642730 - 36642848
Alignment:
Q  217 gtgtcggacgcgtgtcatgttcaacagcgacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtc 316  Q
    ||||||||| |||||| ||| | ||| | ||| |||||||||||  ||| ||||||||||  |||| | ||| |||||||||||   |||||||||||||    
T  36642730 gtgtcggacacgtgtcgtgtccgacaccaacatgacaccgacacttatatttacactaaaatatgtcactttttcaaattattaactgtgtcggcgtgtc 36642829  T
Q  317 aatgtttgtgtcgtttccg 335  Q
    | |||  ||||||| ||||    
T  36642830 agtgtccgtgtcgtgtccg 36642848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 244 - 317
Target Start/End: Complemental strand, 6035546 - 6035474
Alignment:
Q  244 cgacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtca 317  Q
    |||||||||||||||| | ||| ||||||| ||| || | ||||  |||||||||||| |||||||||||||||    
T  6035546 cgacacgacaccgacaaatataattacactgaattatattatttc-tcaaattattagcggtgtcggcgtgtca 6035474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 244 - 317
Target Start/End: Original strand, 22423807 - 22423880
Alignment:
Q  244 cgacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtca 317  Q
    |||||||||||||||| | ||| ||| | | ||| |||||||||| ||||||||||||| ||||| | ||||||    
T  22423807 cgacacgacaccgacatatataattatattgaattatgtgattttctcaaattattagtagtgtcagggtgtca 22423880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 244 - 317
Target Start/End: Complemental strand, 31084387 - 31084314
Alignment:
Q  244 cgacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtca 317  Q
    |||||||||| ||||||   || ||||| | ||| |||||||||| ||||||||||||  ||||||||||||||    
T  31084387 cgacacgacatcgacacttgtaattacattgaattatgtgattttttcaaattattagctgtgtcggcgtgtca 31084314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 244 - 317
Target Start/End: Complemental strand, 39698605 - 39698532
Alignment:
Q  244 cgacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtca 317  Q
    ||||||||||| |||||   || ||||||| ||| |||||||||| ||||||||||||  ||||| ||||||||    
T  39698605 cgacacgacactgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcagcgtgtca 39698532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 244 - 308
Target Start/End: Original strand, 5894828 - 5894892
Alignment:
Q  244 cgacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtc 308  Q
    |||||||||||||||||   |||||| | ||||| || ||||||| ||||||||||||| |||||    
T  5894828 cgacacgacaccgacacttgtagttagattaaattatatgattttttcaaattattagttgtgtc 5894892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 267 - 335
Target Start/End: Complemental strand, 22013455 - 22013387
Alignment:
Q  267 ttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtcaatgtttgtgtcgtttccg 335  Q
    ||||||||||| |||| |||||  |||||||||||  |||||||||||||| |||  ||||||| ||||    
T  22013455 ttacactaaattatgtaatttttccaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccg 22013387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 279 - 335
Target Start/End: Complemental strand, 26716173 - 26716117
Alignment:
Q  279 atgtgattttatcaaattattagtggtgtcggcgtgtcaatgtttgtgtcgtttccg 335  Q
    |||||||||| ||||||||||||  |||||||| ||||||||| | |||||| ||||    
T  26716173 atgtgattttctcaaattattagcagtgtcggcatgtcaatgtctatgtcgtgtccg 26716117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 279 - 335
Target Start/End: Complemental strand, 26985913 - 26985857
Alignment:
Q  279 atgtgattttatcaaattattagtggtgtcggcgtgtcaatgtttgtgtcgtttccg 335  Q
    |||||||||| ||||||||||||  |||||||| ||||||||| | |||||| ||||    
T  26985913 atgtgattttctcaaattattagcagtgtcggcatgtcaatgtctatgtcgtgtccg 26985857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 249 - 328
Target Start/End: Complemental strand, 43564940 - 43564863
Alignment:
Q  249 cgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtcaatgtttgtgtc 328  Q
    ||||||||||||  ||| ||||||||||| ||||||||||  ||||||||  |  |||||||||||||| |||| |||||    
T  43564940 cgacaccgacacttataattacactaaattatgtgatttttccaaattat--gatgtgtcggcgtgtcagtgttcgtgtc 43564863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 59; Significance: 7e-25; HSPs: 56)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 198 - 316
Target Start/End: Complemental strand, 9828154 - 9828036
Alignment:
Q  198 tcggattagacatgttcgggtgtcggacgcgtgtcatgttcaacagcgacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaatta 297  Q
    ||||||||||| ||| | |||||||||| |||||| |||   |||  ||||||||||||||||| | | ||||||| ||| |||||||||||||||||||    
T  9828154 tcggattagacgtgtcccggtgtcggacacgtgtcgtgtctgacacggacacgacaccgacacataaaattacactgaattatgtgattttatcaaatta 9828055  T
Q  298 ttagtggtgtcggcgtgtc 316  Q
    |||||||||||||||||||    
T  9828054 ttagtggtgtcggcgtgtc 9828036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 245 - 335
Target Start/End: Original strand, 7918207 - 7918297
Alignment:
Q  245 gacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtcaatgtttgtgtcgtttccg 335  Q
    |||||||||| |||||| ||| ||||||| ||| |||||||||| |||||||||||||| |||| |||||||| ||| |||||||| ||||    
T  7918207 gacacgacactgacacatataattacactgaattatgtgattttctcaaattattagtgatgtcagcgtgtcattgtctgtgtcgtgtccg 7918297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 246 - 335
Target Start/End: Original strand, 10572586 - 10572675
Alignment:
Q  246 acacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtcaatgtttgtgtcgtttccg 335  Q
    |||| |||||||||||  || ||||||  ||| |||||||||| |||||||||||||||||||||||||||| ||||  |||||| ||||    
T  10572586 acacaacaccgacacatttaattacaccgaattatgtgattttctcaaattattagtggtgtcggcgtgtcagtgttcatgtcgtgtccg 10572675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 244 - 313
Target Start/End: Complemental strand, 25361950 - 25361881
Alignment:
Q  244 cgacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgt 313  Q
    ||||||||||| |||||| ||| ||||||| ||| |||||||||| ||||||||| ||||||||||||||    
T  25361950 cgacacgacactgacacatataattacactgaattatgtgattttctcaaattatcagtggtgtcggcgt 25361881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 238 - 330
Target Start/End: Complemental strand, 17754381 - 17754289
Alignment:
Q  238 caacagcgacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtcaatgtttgtgtcgt 330  Q
    ||||| |||||| |||| |||||| ||||||||||| ||| |||| ||||| |||||||||||| |||||||| ||||||  || ||||||||    
T  17754381 caacaccgacaccacactgacacatatagttacactgaattatgtaattttttcaaattattagcggtgtcggtgtgtcagcgtctgtgtcgt 17754289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 249 - 317
Target Start/End: Original strand, 22881616 - 22881684
Alignment:
Q  249 cgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtca 317  Q
    ||||||||||||   || ||||||||||| |||||||||| ||||||||||||| ||||||||||||||    
T  22881616 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagttgtgtcggcgtgtca 22881684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 198 - 317
Target Start/End: Complemental strand, 40917859 - 40917742
Alignment:
Q  198 tcggattagacatgttcgggtgtcggacgcgtgtcatgttcaacagcgacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaatta 297  Q
    ||||||||| | ||| | |||||||||| |||||| ||| ||||| |||||||||||||| ||   || ||||||| |||  ||||||||| ||||||||    
T  40917859 tcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccaacaccgacacgacaccgagacttgtaattacacttaat--tgtgattttttcaaatta 40917762  T
Q  298 ttagtggtgtcggcgtgtca 317  Q
    ||||  ||||||||||||||    
T  40917761 ttagctgtgtcggcgtgtca 40917742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 250 - 317
Target Start/End: Original strand, 2896122 - 2896189
Alignment:
Q  250 gacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtca 317  Q
    |||||||||| | |||| |||||| ||| |||||||||| |||||||||||| |||||||||||||||    
T  2896122 gacaccgacatatatagctacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtca 2896189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 249 - 316
Target Start/End: Original strand, 14332642 - 14332709
Alignment:
Q  249 cgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtc 316  Q
    ||||||||| ||| ||| ||||||||||| |||||||||| |||||||||||||||||| ||| ||||    
T  14332642 cgacaccgagacatataattacactaaattatgtgattttctcaaattattagtggtgtgggcatgtc 14332709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 250 - 317
Target Start/End: Complemental strand, 36878519 - 36878452
Alignment:
Q  250 gacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtca 317  Q
    |||||||||||  ||| ||||||| ||| |||||||||| |||||||||||| |||||||||||||||    
T  36878519 gacaccgacacctataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtca 36878452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 279 - 344
Target Start/End: Original strand, 609488 - 609553
Alignment:
Q  279 atgtgattttatcaaattattagtggtgtcggcgtgtcaatgtttgtgtcgtttccgatgcctgtg 344  Q
    |||| ||||| |||||||||||||||||||||||||||| ||||  |||||| ||||||| |||||    
T  609488 atgtaattttctcaaattattagtggtgtcggcgtgtcagtgttgatgtcgtgtccgatgtctgtg 609553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 244 - 317
Target Start/End: Original strand, 1486704 - 1486777
Alignment:
Q  244 cgacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtca 317  Q
    |||||||||||||||||  ||| ||||||| ||| |||||||||| ||||||||||||  ||||| ||||||||    
T  1486704 cgacacgacaccgacacttataattacactgaattatgtgattttttcaaattattagctgtgtcagcgtgtca 1486777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 244 - 338
Target Start/End: Complemental strand, 5944347 - 5944251
Alignment:
Q  244 cgacacgacaccgacacaaatagttacactaaatcatgtgattttat--caaattattagtggtgtcggcgtgtcaatgtttgtgtcgtttccgatg 338  Q
    |||||||||||||||||  ||| ||||||| ||| |||||||||| |  |||||||||||  ||| |||||||||| ||| |||||||| |||||||    
T  5944347 cgacacgacaccgacacttataattacactgaattatgtgattttttttcaaattattagctgtggcggcgtgtcagtgtctgtgtcgtgtccgatg 5944251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 216 - 309
Target Start/End: Original strand, 9629867 - 9629960
Alignment:
Q  216 ggtgtcggacgcgtgtcatgttcaacagcgacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcg 309  Q
    ||||||||||  ||||| ||| | ||| |||||||||||||||||  ||| | ||||| ||| || |||||||||||||||||||| |||||||    
T  9629867 ggtgtcggacatgtgtcgtgtccgacatcgacacgacaccgacacttataatcacactgaattatatgattttatcaaattattagcggtgtcg 9629960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 216 - 329
Target Start/End: Original strand, 27471533 - 27471646
Alignment:
Q  216 ggtgtcggacgcgtgtcatgttcaacagcgacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgt 315  Q
    |||||||||| |||||| | | ||||| ||| | |||||| |||||  || ||||||| ||| ||||| |||| |||||||||||| ||| |||| ||||    
T  27471533 ggtgtcggacacgtgtcgtatccaacaccgatatgacaccaacacatgtaattacactgaattatgtgcttttctcaaattattagcggtatcggtgtgt 27471632  T
Q  316 caatgtttgtgtcg 329  Q
    || |||||||||||    
T  27471633 cagtgtttgtgtcg 27471646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 267 - 335
Target Start/End: Original strand, 398783 - 398851
Alignment:
Q  267 ttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtcaatgtttgtgtcgtttccg 335  Q
    ||||||| ||| |||||||||| |||||||||||| ||||||||||||||| |||  ||||||| ||||    
T  398783 ttacactgaattatgtgattttttcaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtccg 398851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 245 - 317
Target Start/End: Complemental strand, 6427413 - 6427341
Alignment:
Q  245 gacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtca 317  Q
    ||||||||||| ||||| ||| ||||| | ||| |||||||||| |||||||||||| ||||| |||||||||    
T  6427413 gacacgacaccaacacatataattacattgaattatgtgattttctcaaattattagcggtgttggcgtgtca 6427341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 249 - 313
Target Start/End: Original strand, 39953146 - 39953210
Alignment:
Q  249 cgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgt 313  Q
    ||||||||||||| | | ||||||||||| |||||||||| | |||||||||| |||||||||||    
T  39953146 cgacaccgacacatacaattacactaaattatgtgattttctaaaattattagcggtgtcggcgt 39953210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 245 - 316
Target Start/End: Original strand, 24577182 - 24577253
Alignment:
Q  245 gacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtc 316  Q
    ||||||||||||||||   || ||||||| ||| |||||||||| ||||||||||||| ||||| |||||||    
T  24577182 gacacgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagttgtgtcagcgtgtc 24577253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 250 - 328
Target Start/End: Original strand, 5898267 - 5898345
Alignment:
Q  250 gacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtcaatgtttgtgtc 328  Q
    ||||||||| || ||| ||||||| ||| |||||||||| ||| |||||||| ||||||||||| ||| ||| ||||||    
T  5898267 gacaccgacgcatataattacactgaattatgtgattttttcagattattagcggtgtcggcgtctcagtgtctgtgtc 5898345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 267 - 317
Target Start/End: Original strand, 17831549 - 17831599
Alignment:
Q  267 ttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtca 317  Q
    ||||||| ||| |||||||||| |||||||||||| |||||||||||||||    
T  17831549 ttacactgaataatgtgattttctcaaattattagcggtgtcggcgtgtca 17831599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 245 - 347
Target Start/End: Original strand, 20157346 - 20157448
Alignment:
Q  245 gacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtcaatgtttgtgtcgtttccgatgcctgtg 344  Q
    ||||||||||||||||| ||  ||||||| ||| |||||||||| ||| |||||||| |||||||  |||||| ||   ||||||| |||| || |||||    
T  20157346 gacacgacaccgacacatatgattacactgaattatgtgattttctcacattattagcggtgtcgatgtgtcagtgcccgtgtcgtgtccggtgtctgtg 20157445  T
Q  345 ctt 347  Q
    |||    
T  20157446 ctt 20157448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 253 - 319
Target Start/End: Original strand, 34257914 - 34257980
Alignment:
Q  253 accgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtcaat 319  Q
    ||||||| | ||| ||||||||||| |||||||||||| |||||||||  ||||||| |||||||||    
T  34257914 accgacatatataattacactaaattatgtgattttattaaattattaacggtgtcgacgtgtcaat 34257980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 267 - 317
Target Start/End: Complemental strand, 34298477 - 34298427
Alignment:
Q  267 ttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtca 317  Q
    ||||||| ||| |||||||||| ||||||||||||||||||||| ||||||    
T  34298477 ttacactgaattatgtgattttctcaaattattagtggtgtcggtgtgtca 34298427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 250 - 316
Target Start/End: Original strand, 43492495 - 43492561
Alignment:
Q  250 gacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtc 316  Q
    |||||||||||| ||| ||||||  ||| | |||||||| |||||||| ||||||||||||||||||    
T  43492495 gacaccgacacacataattacaccgaattacgtgattttctcaaattactagtggtgtcggcgtgtc 43492561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 244 - 298
Target Start/End: Complemental strand, 44482294 - 44482240
Alignment:
Q  244 cgacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattat 298  Q
    |||||||||||||||||| ||| ||||||| ||| |||||||||| |||||||||    
T  44482294 cgacacgacaccgacacatataattacactgaattatgtgattttctcaaattat 44482240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 244 - 330
Target Start/End: Complemental strand, 47989561 - 47989476
Alignment:
Q  244 cgacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtcaatgtttgtgtcgt 330  Q
    |||||||||||||||||   || ||||||| ||| |||||||||| | ||||||||| | |||||||||||||| ||| ||||||||    
T  47989561 cgacacgacaccgacacttgtaattacactgaattatgtgatttttttaaattatta-ttgtgtcggcgtgtcagtgtctgtgtcgt 47989476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 244 - 317
Target Start/End: Complemental strand, 113363 - 113290
Alignment:
Q  244 cgacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtca 317  Q
    |||||||||||| ||||   || ||||||| ||| |||||||||| ||||||||||||  ||||||||||||||    
T  113363 cgacacgacacctacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtca 113290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 249 - 301
Target Start/End: Complemental strand, 29229521 - 29229468
Alignment:
Q  249 cgacaccgacacaaatagttac-actaaatcatgtgattttatcaaattattag 301  Q
    ||||||||||||| ||| |||| |||||||||||||||||| ||||||||||||    
T  29229521 cgacaccgacacatataattaccactaaatcatgtgattttctcaaattattag 29229468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 244 - 301
Target Start/End: Original strand, 34712378 - 34712435
Alignment:
Q  244 cgacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattag 301  Q
    ||||||||||| |||||| ||| ||||||||||| |||| ||||| ||||||||||||    
T  34712378 cgacacgacactgacacatataattacactaaattatgttattttctcaaattattag 34712435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 249 - 330
Target Start/End: Original strand, 41877470 - 41877551
Alignment:
Q  249 cgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtcaatgtttgtgtcgt 330  Q
    ||||||||||||   || ||||||||||| |||| ||||| |||||||||||| |||||||||||  || ||| ||||||||    
T  41877470 cgacaccgacacttgtaattacactaaattatgtaattttctcaaattattagcggtgtcggcgtaccagtgtctgtgtcgt 41877551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 269 - 321
Target Start/End: Original strand, 10474997 - 10475049
Alignment:
Q  269 acactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtcaatgt 321  Q
    ||||| ||| |||||||||| |||| ||||||| |||||||||||||||||||    
T  10474997 acactgaattatgtgattttctcaagttattagcggtgtcggcgtgtcaatgt 10475049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 335
Target Start/End: Original strand, 14359540 - 14359607
Alignment:
Q  267 ttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtcaatgtttgtgtcgtttccg 335  Q
    ||||||||||| |||||||||| ||||||||||||  |||||||||||||  ||| |||||||| ||||    
T  14359540 ttacactaaattatgtgatttt-tcaaattattagctgtgtcggcgtgtccgtgtctgtgtcgtgtccg 14359607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 317
Target Start/End: Complemental strand, 37598890 - 37598823
Alignment:
Q  249 cgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtca 317  Q
    ||||||||||||  ||| ||||||| |||  ||||||||| ||||||||||||| ||||||||||||||    
T  37598890 cgacaccgacacttataattacactgaatt-tgtgattttttcaaattattagttgtgtcggcgtgtca 37598823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 317
Target Start/End: Original strand, 46348383 - 46348451
Alignment:
Q  249 cgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtca 317  Q
    ||||||||||||   || ||||||||||| || ||||||| ||||||||||||  ||||||||||||||    
T  46348383 cgacaccgacacttgtaattacactaaattatatgattttttcaaattattagctgtgtcggcgtgtca 46348451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 244 - 315
Target Start/End: Original strand, 5376495 - 5376566
Alignment:
Q  244 cgacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgt 315  Q
    |||||||||||||||||   || ||||||| ||| |||| ||||| | |||||||||| |||||||||||||    
T  5376495 cgacacgacaccgacacttttaattacactgaattatgttattttcttaaattattagcggtgtcggcgtgt 5376566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 263 - 338
Target Start/End: Original strand, 15641044 - 15641119
Alignment:
Q  263 atagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtcaatgtttgtgtcgtttccgatg 338  Q
    ||||||||||| |||||||||||||| | ||||||||||  |||||||| ||||| |||  ||||| | |||||||    
T  15641044 atagttacactgaatcatgtgattttcttaaattattagcagtgtcggcatgtcagtgtccgtgtcatgtccgatg 15641119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 249 - 316
Target Start/End: Original strand, 22515887 - 22515954
Alignment:
Q  249 cgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtc 316  Q
    ||||||||||||   || ||||||||||| |||||||||| ||||||||||||  ||||| |||||||    
T  22515887 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtctgcgtgtc 22515954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 244 - 315
Target Start/End: Complemental strand, 38503384 - 38503313
Alignment:
Q  244 cgacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgt 315  Q
    ||||| |||||||||||| ||| ||||||| ||  || ||||||| |||||||||||| |||||||| ||||    
T  38503384 cgacaggacaccgacacatataattacactgaaatatatgattttctcaaattattagcggtgtcggtgtgt 38503313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 251 - 317
Target Start/End: Complemental strand, 13997940 - 13997874
Alignment:
Q  251 acaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtca 317  Q
    ||||||||||| ||| ||||||| ||| |||||||||| | |||| ||||  |||||||||||||||    
T  13997940 acaccgacacatataattacactgaattatgtgatttttttaaataattaacggtgtcggcgtgtca 13997874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 198 - 300
Target Start/End: Original strand, 16164264 - 16164366
Alignment:
Q  198 tcggattagacatgttcgggtgtcggacgcgtgtcatgttcaacagcgacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaatta 297  Q
    ||||||||| | ||| | |||||||||| |||||   || ||||| | ||||||||  |||||| ||| ||||| ||||| |||||||||| ||||||||    
T  16164264 tcggattaggcgtgtcctggtgtcggacacgtgttgcgtccaacaccaacacgacaatgacacatataattacattaaattatgtgattttttcaaatta 16164363  T
Q  298 tta 300  Q
    |||    
T  16164364 tta 16164366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 246 - 296
Target Start/End: Complemental strand, 25272544 - 25272494
Alignment:
Q  246 acacgacaccgacacaaatagttacactaaatcatgtgattttatcaaatt 296  Q
    |||||||||||||||  ||| ||||||||||| |||||||||| |||||||    
T  25272544 acacgacaccgacacttataattacactaaattatgtgattttctcaaatt 25272494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 267 - 317
Target Start/End: Original strand, 32461481 - 32461531
Alignment:
Q  267 ttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtca 317  Q
    ||||| ||||| |||||||||| ||||||||||||| ||| ||||||||||    
T  32461481 ttacattaaattatgtgattttttcaaattattagttgtgccggcgtgtca 32461531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 246 - 308
Target Start/End: Complemental strand, 34371775 - 34371714
Alignment:
Q  246 acacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtc 308  Q
    |||||||||||||||| ||| ||||||| ||| |||||||||| || ||||||||| ||||||    
T  34371775 acacgacaccgacacatataattacactgaattatgtgattttctc-aattattagcggtgtc 34371714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 249 - 319
Target Start/End: Original strand, 39130767 - 39130837
Alignment:
Q  249 cgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtcaat 319  Q
    ||||||||||||| ||| ||||||||||| || | ||||| | ||||||||| | ||||| ||||||||||    
T  39130767 cgacaccgacacatataattacactaaattatataattttctaaaattattaatagtgtcagcgtgtcaat 39130837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 249 - 315
Target Start/End: Complemental strand, 52903308 - 52903242
Alignment:
Q  249 cgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgt 315  Q
    ||||||||||||| ||| ||||||| ||| || ||||||||| |||||||||  ||| |||||||||    
T  52903308 cgacaccgacacatataattacactgaattatatgattttattaaattattaacggtatcggcgtgt 52903242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 251 - 300
Target Start/End: Original strand, 1864882 - 1864931
Alignment:
Q  251 acaccgacacaaatagttacactaaatcatgtgattttatcaaattatta 300  Q
    ||||||||||| ||| ||||||| ||| |||||||||| |||||||||||    
T  1864882 acaccgacacatataattacactgaattatgtgattttctcaaattatta 1864931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 330
Target Start/End: Complemental strand, 9709879 - 9709798
Alignment:
Q  249 cgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtcaatgtttgtgtcgt 330  Q
    ||||||||||||| ||| |||||   ||| |||||||||| |||||||||||| ||||| ||| ||||| |||  |||||||    
T  9709879 cgacaccgacacatataattacaacgaattatgtgattttctcaaattattagcggtgtaggcatgtcagtgtccgtgtcgt 9709798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 251 - 316
Target Start/End: Complemental strand, 10233310 - 10233245
Alignment:
Q  251 acaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtc 316  Q
    |||| |||||| ||| ||||||| ||| |||||||||| |||| ||||||||||||| || |||||    
T  10233310 acacagacacatataattacactgaattatgtgattttctcaatttattagtggtgttggtgtgtc 10233245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 267 - 316
Target Start/End: Original strand, 12443478 - 12443527
Alignment:
Q  267 ttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtc 316  Q
    ||||||| ||| |||||||||| ||||||||||||  |||||||||||||    
T  12443478 ttacactgaattatgtgattttctcaaattattagctgtgtcggcgtgtc 12443527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 327
Target Start/End: Original strand, 19562622 - 19562699
Alignment:
Q  250 gacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtcaatgtttgtgt 327  Q
    |||||| ||||| ||| ||||||| ||  ||| |||||| ||||||||||||  |||||||||||||| |||| ||||    
T  19562622 gacacctacacatataattacactgaactatgagattttctcaaattattagcagtgtcggcgtgtcagtgttcgtgt 19562699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 279 - 335
Target Start/End: Complemental strand, 1262913 - 1262857
Alignment:
Q  279 atgtgattttatcaaattattagtggtgtcggcgtgtcaatgtttgtgtcgtttccg 335  Q
    |||||||||| ||||||||||||  |||||||||||||  |||| ||||||| ||||    
T  1262913 atgtgattttctcaaattattagctgtgtcggcgtgtccgtgttcgtgtcgtgtccg 1262857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 250 - 330
Target Start/End: Original strand, 23636050 - 23636130
Alignment:
Q  250 gacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtcaatgtttgtgtcgt 330  Q
    |||||||||||| | | ||||||| ||| |||| ||||| ||||||| || | ||| |||||||||||||||  |||||||    
T  23636050 gacaccgacacatacaattacactgaattatgtaattttctcaaatttttggcggtttcggcgtgtcaatgtccgtgtcgt 23636130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 265 - 317
Target Start/End: Complemental strand, 30359431 - 30359379
Alignment:
Q  265 agttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtca 317  Q
    ||||||||||||| |||||||||| ||||||||| ||| ||| ||| ||||||    
T  30359431 agttacactaaattatgtgattttttcaaattatcagttgtgccggtgtgtca 30359379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 249 - 301
Target Start/End: Complemental strand, 40181930 - 40181878
Alignment:
Q  249 cgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattag 301  Q
    ||||||||| ||| ||| ||||||| ||| |||||||||| ||||||||||||    
T  40181930 cgacaccgatacatataattacactgaattatgtgattttctcaaattattag 40181878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 267 - 335
Target Start/End: Original strand, 48450605 - 48450673
Alignment:
Q  267 ttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtcaatgtttgtgtcgtttccg 335  Q
    ||||||||||| |||| ||||| ||||||||||||  |||| ||||||||| |||  ||||||| ||||    
T  48450605 ttacactaaattatgttattttttcaaattattagctgtgttggcgtgtcagtgtccgtgtcgtgtccg 48450673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 56; Significance: 5e-23; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 244 - 335
Target Start/End: Complemental strand, 15902886 - 15902795
Alignment:
Q  244 cgacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtcaatgtttgtgtcgtttccg 335  Q
    |||||| ||||||||||| ||| ||||||||||| |||||||||||||||||||||| |||||||||| ||||| ||| |||||||| ||||    
T  15902886 cgacacaacaccgacacatataattacactaaattatgtgattttatcaaattattattggtgtcggcatgtcagtgtctgtgtcgtgtccg 15902795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 244 - 330
Target Start/End: Complemental strand, 1433518 - 1433432
Alignment:
Q  244 cgacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtcaatgtttgtgtcgt 330  Q
    |||||||||||||||||| ||| |||||| |||| |||||||||| |||||||||||  |||||||||||||||||||  |||||||    
T  1433518 cgacacgacaccgacacatataattacaccaaatgatgtgattttctcaaattattaacggtgtcggcgtgtcaatgtccgtgtcgt 1433432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 216 - 317
Target Start/End: Complemental strand, 32308212 - 32308111
Alignment:
Q  216 ggtgtcggacgcgtgtcatgttcaacagcgacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgt 315  Q
    ||||||||||  ||||| ||| ||||| ||||||||||| |||||| | | ||||||| ||| |||||||||| |||||||||||| |||||||||||||    
T  32308212 ggtgtcggacatgtgtcgtgtccaacaccgacacgacactgacacatacaattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgt 32308113  T
Q  316 ca 317  Q
    ||    
T  32308112 ca 32308111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 198 - 321
Target Start/End: Complemental strand, 24339752 - 24339629
Alignment:
Q  198 tcggattagacatgttcgggtgtcggacgcgtgtcatgttcaacagcgacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaatta 297  Q
    ||||||||| | ||| | |||||||||  |||||| ||| | ||| |||||||||||||||||   || ||||||| ||| |||||||||| ||||||||    
T  24339752 tcggattaggcgtgtcccggtgtcggatacgtgtcgtgtccgacaccgacacgacaccgacacttgtaattacactgaattatgtgattttttcaaatta 24339653  T
Q  298 ttagtggtgtcggcgtgtcaatgt 321  Q
    ||||  ||||||||||||||||||    
T  24339652 ttagctgtgtcggcgtgtcaatgt 24339629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 190 - 319
Target Start/End: Original strand, 11665381 - 11665510
Alignment:
Q  190 gacattcatcggattagacatgttcgggtgtcggacgcgtgtcatgttcaacagcgacacgacaccgacacaaatagttacactaaatcatgtgatttta 289  Q
    ||||||| ||| ||||||  ||||  |||||||||| |||||| ||||| ||| ||||| |||| ||||||  ||| ||| ||| ||| ||||||||||     
T  11665381 gacattcctcgtattagatgtgtttcggtgtcggacacgtgtcgtgttcgacaccgacatgacatcgacacttataattagactgaattatgtgattttt 11665480  T
Q  290 tcaaattattagtggtgtcggcgtgtcaat 319  Q
    ||||||||||||| ||||| ||||||||||    
T  11665481 tcaaattattagttgtgtcagcgtgtcaat 11665510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 244 - 330
Target Start/End: Original strand, 7328686 - 7328772
Alignment:
Q  244 cgacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtcaatgtttgtgtcgt 330  Q
    |||||||||||||||||| ||| ||||||||||| |||| ||||| ||||||||||||  || ||| ||||| ||||| ||||||||    
T  7328686 cgacacgacaccgacacatataattacactaaattatgttattttctcaaattattagcagtatcgacgtgttaatgtctgtgtcgt 7328772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 245 - 335
Target Start/End: Complemental strand, 27945104 - 27945014
Alignment:
Q  245 gacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtcaatgtttgtgtcgtttccg 335  Q
    ||||||||||||||||   || ||||||| ||| |||| ||||| |||||||||||||||||||||||||||| |||  ||||||| ||||    
T  27945104 gacacgacaccgacacttgtaattacactgaattatgtaattttctcaaattattagtggtgtcggcgtgtcagtgtccgtgtcgtgtccg 27945014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 246 - 315
Target Start/End: Complemental strand, 10042999 - 10042930
Alignment:
Q  246 acacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgt 315  Q
    ||||||||| |||||  ||| |||| |||||| |||||| ||||||||||||||||||||||||||||||    
T  10042999 acacgacactgacacttataattacgctaaattatgtgaatttatcaaattattagtggtgtcggcgtgt 10042930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 246 - 317
Target Start/End: Original strand, 6630909 - 6630980
Alignment:
Q  246 acacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtca 317  Q
    |||||||| ||||||| ||| ||||||| ||| | |||| ||| ||||||||||||||||||||||||||||    
T  6630909 acacgacatcgacacatataattacactgaattaagtgactttctcaaattattagtggtgtcggcgtgtca 6630980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 249 - 328
Target Start/End: Complemental strand, 20549850 - 20549771
Alignment:
Q  249 cgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtcaatgtttgtgtc 328  Q
    ||||||||||||| ||| ||||||| ||| | |||||||| |||||||||||| |||||||| |||||| ||| ||||||    
T  20549850 cgacaccgacacatataattacactgaattacgtgattttctcaaattattagcggtgtcggtgtgtcagtgtatgtgtc 20549771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 244 - 330
Target Start/End: Original strand, 22602705 - 22602791
Alignment:
Q  244 cgacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtcaatgtttgtgtcgt 330  Q
    |||||||||||||||||| ||| ||||||| ||| |||||||||| |||||| |||   ||||||||||||||| ||  ||||||||    
T  22602705 cgacacgacaccgacacatataattacactgaattatgtgattttctcaaataatttacggtgtcggcgtgtcagtgcctgtgtcgt 22602791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 249 - 330
Target Start/End: Original strand, 8090025 - 8090106
Alignment:
Q  249 cgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtcaatgtttgtgtcgt 330  Q
    ||||||| ||||| | ||||||||| ||| | ||||| || |||||||| |||||||||| |||||||| ||||||||||||    
T  8090025 cgacaccaacacatacagttacactgaattacgtgatattctcaaattactagtggtgtctgcgtgtcattgtttgtgtcgt 8090106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 256 - 317
Target Start/End: Complemental strand, 22868094 - 22868033
Alignment:
Q  256 gacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtca 317  Q
    |||||| ||| ||||||| ||| |||||||||| ||| ||||||||||||||||||||||||    
T  22868094 gacacatataattacactgaattatgtgattttctcatattattagtggtgtcggcgtgtca 22868033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 229 - 321
Target Start/End: Original strand, 29787351 - 29787441
Alignment:
Q  229 tgtcatgttcaacagcgacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtcaatgt 321  Q
    |||||||| ||||| |||||  ||||| |||||  || ||||||| ||| |||||||||| |||||||||||| ||||||||||||| |||||    
T  29787351 tgtcatgtccaacaccgacattacaccaacaca--taattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgttaatgt 29787441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 279 - 330
Target Start/End: Complemental strand, 5307289 - 5307238
Alignment:
Q  279 atgtgattttatcaaattattagtggtgtcggcgtgtcaatgtttgtgtcgt 330  Q
    |||||||||| ||||||||| |||||||||||||||||||||| ||| ||||    
T  5307289 atgtgattttctcaaattataagtggtgtcggcgtgtcaatgtctgtatcgt 5307238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 250 - 313
Target Start/End: Complemental strand, 5835305 - 5835242
Alignment:
Q  250 gacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgt 313  Q
    |||||||||||| ||| ||||||| ||| |||| ||||| ||||| ||||||||||||||||||    
T  5835305 gacaccgacacatataattacactgaattatgttattttctcaaactattagtggtgtcggcgt 5835242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 249 - 316
Target Start/End: Complemental strand, 37870952 - 37870885
Alignment:
Q  249 cgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtc 316  Q
    ||||||||||||| ||| |||||| ||||||||||||||| |||||| |||||| |||| || |||||    
T  37870952 cgacaccgacacacataattacacgaaatcatgtgattttctcaaatgattagtagtgttggggtgtc 37870885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 252 - 330
Target Start/End: Original strand, 2425736 - 2425814
Alignment:
Q  252 caccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtcaatgtttgtgtcgt 330  Q
    |||||||||| |||||| |||| ||| |||||||||| |||||||||||  |||| |||||||||| | | ||||||||    
T  2425736 caccgacacatatagttccacttaattatgtgattttctcaaattattaacggtgccggcgtgtcagtatctgtgtcgt 2425814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 244 - 330
Target Start/End: Original strand, 26329377 - 26329463
Alignment:
Q  244 cgacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtcaatgtttgtgtcgt 330  Q
    ||||||||| |||||||| ||| ||||||| |||  |||| |||| |||||||||||  | ||||||||||||| ||| ||||||||    
T  26329377 cgacacgacgccgacacatataattacactgaattgtgtgtttttctcaaattattaacgatgtcggcgtgtcagtgtctgtgtcgt 26329463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 252 - 317
Target Start/End: Complemental strand, 2948739 - 2948674
Alignment:
Q  252 caccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtca 317  Q
    |||||||||| ||| ||||||||||| | |||||||| | ||||||| || |||||||||||||||    
T  2948739 caccgacacatataattacactaaattacgtgattttctaaaattatcagcggtgtcggcgtgtca 2948674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 245 - 330
Target Start/End: Complemental strand, 5236049 - 5235964
Alignment:
Q  245 gacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtcaatgtttgtgtcgt 330  Q
    ||||||||||||| | | ||| ||||||||||| || | ||||| | |||||||||| ||||||| ||||||| ||| ||||||||    
T  5236049 gacacgacaccgatatatataattacactaaattatataattttcttaaattattagcggtgtcgacgtgtcagtgtctgtgtcgt 5235964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 248 - 317
Target Start/End: Original strand, 9408333 - 9408402
Alignment:
Q  248 acgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtca 317  Q
    |||||||||||||   || ||||||||||| |||||||||| ||||||||||| | ||||||| ||||||    
T  9408333 acgacaccgacacttgtaattacactaaattatgtgattttttcaaattattaattgtgtcggtgtgtca 9408402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 250 - 315
Target Start/End: Complemental strand, 19206108 - 19206043
Alignment:
Q  250 gacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgt 315  Q
    |||||||||||| ||| ||| | | ||| |||||||||| |||||||||||| |||||||||||||    
T  19206108 gacaccgacacatataattataatgaattatgtgattttctcaaattattagcggtgtcggcgtgt 19206043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 249 - 330
Target Start/End: Complemental strand, 26733363 - 26733282
Alignment:
Q  249 cgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtcaatgtttgtgtcgt 330  Q
    |||||||||||||  || ||| ||| ||| |||||||||| |||||||||||| ||||||| ||||||| |||  |||||||    
T  26733363 cgacaccgacacatttaattagactgaattatgtgattttgtcaaattattagcggtgtcgacgtgtcagtgtccgtgtcgt 26733282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 246 - 330
Target Start/End: Complemental strand, 30731097 - 30731015
Alignment:
Q  246 acacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtcaatgtttgtgtcgt 330  Q
    |||||||||||||||| |   ||||||| ||| |||||||||| |||||||||| | |||||||||||| || ||| ||||||||    
T  30731097 acacgacaccgacacacaa--ttacactgaattatgtgattttctcaaattattcgcggtgtcggcgtgccactgtatgtgtcgt 30731015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 301
Target Start/End: Complemental strand, 3721152 - 3721100
Alignment:
Q  249 cgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattag 301  Q
    ||||||||||||| ||| ||| ||||||| |||||||||| ||||||||||||    
T  3721152 cgacaccgacacatataattatactaaattatgtgattttctcaaattattag 3721100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 250 - 338
Target Start/End: Original strand, 11061077 - 11061165
Alignment:
Q  250 gacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtcaatgtttgtgtcgtttccgatg 338  Q
    |||||||||||   || ||| ||||||| |||||||||| ||||||||||||  ||||||| |||||| |||  ||||||| |||||||    
T  11061077 gacaccgacacttgtaattatactaaattatgtgattttttcaaattattagctgtgtcggtgtgtcagtgtccgtgtcgtatccgatg 11061165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 300
Target Start/End: Complemental strand, 16341560 - 16341504
Alignment:
Q  244 cgacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattatta 300  Q
    ||||||||||||| |||| ||| ||||||| ||| |||||||||| |||||||||||    
T  16341560 cgacacgacaccggcacatataattacacttaattatgtgattttctcaaattatta 16341504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 323
Target Start/End: Complemental strand, 41020553 - 41020481
Alignment:
Q  251 acaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtcaatgttt 323  Q
    |||||||| || ||| ||||||||||| ||||||||||   ||||||||||| |||||| ||||||| |||||    
T  41020553 acaccgacgcatataattacactaaattatgtgatttttgtaaattattagttgtgtcgacgtgtcagtgttt 41020481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 248 - 315
Target Start/End: Complemental strand, 2034501 - 2034434
Alignment:
Q  248 acgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgt 315  Q
    ||||||| |||||| |||  |||||||||| || |||| || |||||||||||||||||||| |||||    
T  2034501 acgacactgacacatatatatacactaaattatatgatattctcaaattattagtggtgtcgacgtgt 2034434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 244 - 311
Target Start/End: Complemental strand, 5548740 - 5548673
Alignment:
Q  244 cgacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggc 311  Q
    ||||||||||| |||||| ||| ||||||| ||| || ||||||| ||||||||| || |||||||||    
T  5548740 cgacacgacactgacacatataattacactgaattatttgattttctcaaattatcagcggtgtcggc 5548673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 250 - 329
Target Start/End: Complemental strand, 22484083 - 22484004
Alignment:
Q  250 gacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtcaatgtttgtgtcg 329  Q
    |||||||||||| ||| ||| ||| ||| |||  ||||| | |||||||||| ||||||||||||||| ||| |||||||    
T  22484083 gacaccgacacatataattatactgaattatgcaattttctaaaattattagcggtgtcggcgtgtcagtgtctgtgtcg 22484004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 251 - 310
Target Start/End: Original strand, 27093415 - 27093474
Alignment:
Q  251 acaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcgg 310  Q
    |||||||| || ||| ||||||||||| |||||||||| | |||||||||| ||||||||    
T  27093415 acaccgacgcatataattacactaaattatgtgattttcttaaattattagcggtgtcgg 27093474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 251 - 310
Target Start/End: Complemental strand, 27184886 - 27184827
Alignment:
Q  251 acaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcgg 310  Q
    |||||||| || ||| ||||||||||| |||||||||| | |||||||||| ||||||||    
T  27184886 acaccgacgcatataattacactaaattatgtgattttcttaaattattagcggtgtcgg 27184827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 246 - 317
Target Start/End: Complemental strand, 49107882 - 49107812
Alignment:
Q  246 acacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtca 317  Q
    |||||||||||||||| ||| | ||||| ||| ||||| |||| |||||||||||| |||||||| ||||||    
T  49107882 acacgacaccgacacatataatcacactcaattatgtg-ttttctcaaattattagcggtgtcggtgtgtca 49107812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 244 - 338
Target Start/End: Complemental strand, 7438770 - 7438676
Alignment:
Q  244 cgacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtcaatgtttgtgtcgtttccgatg 338  Q
    ||||| |||||||||||   || ||||| | ||| |||||||||| |||||||||||   |||||||| ||||| ||||| |||||| |||||||    
T  7438770 cgacatgacaccgacacttgtaattacattgaattatgtgattttttcaaattattaactgtgtcggcatgtcagtgtttatgtcgtatccgatg 7438676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 234 - 308
Target Start/End: Complemental strand, 8160490 - 8160416
Alignment:
Q  234 tgttcaacagcgacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtc 308  Q
    ||||| ||| |||||||| ||| ||||| ||| ||||||||||| |||| ||||| | |||||||||| ||||||    
T  8160490 tgttcgacaccgacacgataccaacacatataattacactaaattatgtaattttcttaaattattagcggtgtc 8160416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 267 - 317
Target Start/End: Complemental strand, 25481943 - 25481893
Alignment:
Q  267 ttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtca 317  Q
    ||||||| ||| |||||||||| ||||||||||||  ||||||||||||||    
T  25481943 ttacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtca 25481893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 244 - 313
Target Start/End: Complemental strand, 7758386 - 7758317
Alignment:
Q  244 cgacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgt 313  Q
    |||||||||||||||||| ||| ||| ||| ||| || | ||||| | ||||||||||||||||| ||||    
T  7758386 cgacacgacaccgacacacataattatactgaattatataattttctaaaattattagtggtgtcagcgt 7758317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 245 - 338
Target Start/End: Original strand, 18013070 - 18013163
Alignment:
Q  245 gacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtcaatgtttgtgtcgtttccgatg 338  Q
    |||||||||| |||||| ||| ||||||| ||| |||| ||||| | ||||||||||| ||||| |  ||||| |||  |||||||||| ||||    
T  18013070 gacacgacactgacacatataattacactgaattatgtaatttttttaaattattagtagtgtcagaatgtcagtgtccgtgtcgtttctgatg 18013163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 316
Target Start/End: Original strand, 23128643 - 23128728
Alignment:
Q  231 tcatgttcaacagcgacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtc 316  Q
    |||||||| ||| | |||| ||||||||||| ||  ||||||| ||| || || |||| ||||||||||| ||||||| |||||||    
T  23128643 tcatgttcgacaccaacacaacaccgacacatatgattacactgaattatatggttttctcaaattattattggtgtcagcgtgtc 23128728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 301
Target Start/End: Original strand, 26033432 - 26033513
Alignment:
Q  220 tcggacgcgtgtcatgttcaacagcgacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattag 301  Q
    |||||| ||||||||||   ||| |||||||| ||||||||   || ||||||| ||| |||||||||| ||||||||||||    
T  26033432 tcggacacgtgtcatgtctgacaccgacacgagaccgacacttgtaattacactgaattatgtgattttttcaaattattag 26033513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 279 - 328
Target Start/End: Complemental strand, 35861993 - 35861944
Alignment:
Q  279 atgtgattttatcaaattattagtggtgtcggcgtgtcaatgtttgtgtc 328  Q
    |||||||||| ||||||||||||| |||||||||||| | |||| |||||    
T  35861993 atgtgattttttcaaattattagttgtgtcggcgtgttagtgttagtgtc 35861944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 252 - 328
Target Start/End: Original strand, 3520345 - 3520421
Alignment:
Q  252 caccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtcaatgtttgtgtc 328  Q
    |||||||||| ||| ||||| | ||| || ||||||| |||||| ||||  |||||| |||||||||||| ||||||    
T  3520345 caccgacacatataattacattgaattatatgattttctcaaatgattatcggtgtcagcgtgtcaatgtctgtgtc 3520421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 253 - 317
Target Start/End: Original strand, 4008568 - 4008632
Alignment:
Q  253 accgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtca 317  Q
    ||||||||| | | ||||| | |||||||| |||||||||||||||||  |||||| ||||||||    
T  4008568 accgacacatacaattacattgaatcatgtaattttatcaaattattaaaggtgtctgcgtgtca 4008632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 253 - 317
Target Start/End: Original strand, 4013960 - 4014024
Alignment:
Q  253 accgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtca 317  Q
    ||||||||| | | ||||| | |||||||| |||||||||||||||||  |||||| ||||||||    
T  4013960 accgacacatacaattacattgaatcatgtaattttatcaaattattaaaggtgtctgcgtgtca 4014024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 249 - 317
Target Start/End: Complemental strand, 9482993 - 9482925
Alignment:
Q  249 cgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtca 317  Q
    ||||||||||||| ||| ||||||| |||  ||||||||| ||||||||| || | |||||| ||||||    
T  9482993 cgacaccgacacatataattacactgaattgtgtgattttctcaaattatcagcgatgtcggtgtgtca 9482925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 279 - 335
Target Start/End: Original strand, 11722128 - 11722184
Alignment:
Q  279 atgtgattttatcaaattattagtggtgtcggcgtgtcaatgtttgtgtcgtttccg 335  Q
    |||||||||| ||||||| |||| ||||||||||||||| |||  ||||||| ||||    
T  11722128 atgtgattttctcaaattgttagcggtgtcggcgtgtcagtgtccgtgtcgtgtccg 11722184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 249 - 317
Target Start/End: Complemental strand, 15680868 - 15680800
Alignment:
Q  249 cgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtca 317  Q
    ||||||||||||  ||| ||||||||||| |||||||||| |  |||||||||   |||||||||||||    
T  15680868 cgacaccgacacttataattacactaaattatgtgattttttttaattattagctatgtcggcgtgtca 15680800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 267 - 335
Target Start/End: Complemental strand, 24105719 - 24105651
Alignment:
Q  267 ttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtcaatgtttgtgtcgtttccg 335  Q
    ||||||| |||||||  ||||| ||||||||||||  |||||||||||||| |||  ||||||| ||||    
T  24105719 ttacactgaatcatgcaattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccg 24105651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 249 - 309
Target Start/End: Original strand, 32287463 - 32287523
Alignment:
Q  249 cgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcg 309  Q
    ||||||||||||| ||| || |||| ||| |||||||||| ||| |||||||| |||||||    
T  32287463 cgacaccgacacatatacttgcactgaattatgtgattttctcagattattagcggtgtcg 32287523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 250 - 314
Target Start/End: Complemental strand, 37742581 - 37742517
Alignment:
Q  250 gacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtg 314  Q
    |||||||||||| ||  ||||| | |||||||  ||||| | |||||||||||||||||||||||    
T  37742581 gacaccgacacatattattacattgaatcatgaaattttgttaaattattagtggtgtcggcgtg 37742517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 198 - 350
Target Start/End: Complemental strand, 241704 - 241552
Alignment:
Q  198 tcggattagacatgttcgggtgtcggacgcgtgtcatgttcaacagcgacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaatta 297  Q
    ||||||||| | ||| | |||||||||| |||||| ||| | ||| | |||||||||||||||  ||| ||||||||||| ||||||||||  |||||||    
T  241704 tcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccaacacgacaccgacactcataattacactaaattatgtgatttttccaaatta 241605  T
Q  298 ttagtggtgtcggcgtgtcaatgtttgtgtcgtttccgatgcctgtgcttcat 350  Q
    ||||  |||||||||||||| |||  ||||||| |||| || | |||||||||    
T  241604 ttagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtgcttcat 241552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 52; Significance: 1e-20; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 198 - 317
Target Start/End: Original strand, 15816078 - 15816197
Alignment:
Q  198 tcggattagacatgttcgggtgtcggacgcgtgtcatgttcaacagcgacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaatta 297  Q
    ||||||||| | ||| | |||||||||  |||||| ||| | ||| | |||||||||||||||  ||| ||||||||||| |||||||||| ||||||||    
T  15816078 tcggattaggcgtgtcccggtgtcggattcgtgtcgtgtccgacaccaacacgacaccgacacttataattacactaaattatgtgattttttcaaatta 15816177  T
Q  298 ttagtggtgtcggcgtgtca 317  Q
    ||||| ||||||||||||||    
T  15816178 ttagttgtgtcggcgtgtca 15816197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 198 - 335
Target Start/End: Complemental strand, 22652086 - 22651949
Alignment:
Q  198 tcggattagacatgttcgggtgtcggacgcgtgtcatgttcaacagcgacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaatta 297  Q
    ||||||||||| ||| | |||||||||| | |||| ||| | ||| |||||||||||||||||   || ||| | | ||| |||||||||| ||||||||    
T  22652086 tcggattagacgtgtcccggtgtcggacacatgtcgtgtccgacaccgacacgacaccgacacttgtaattatattgaattatgtgattttttcaaatta 22651987  T
Q  298 ttagtggtgtcggcgtgtcaatgtttgtgtcgtttccg 335  Q
    ||||  |||||||||||||| |||  ||||||| ||||    
T  22651986 ttagctgtgtcggcgtgtcagtgtccgtgtcgtgtccg 22651949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 247 - 316
Target Start/End: Original strand, 39954277 - 39954346
Alignment:
Q  247 cacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtc 316  Q
    |||| ||||| |||| ||| ||||||||||| |||||||||| |||||||||||| ||||||||||||||    
T  39954277 cacggcaccgtcacatataattacactaaattatgtgattttctcaaattattagcggtgtcggcgtgtc 39954346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 249 - 317
Target Start/End: Original strand, 4786338 - 4786406
Alignment:
Q  249 cgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtca 317  Q
    ||||||||||||| ||| ||||||| ||| |||||||||| | ||||||||| ||||||||||||||||    
T  4786338 cgacaccgacacatataattacactgaattatgtgattttcttaaattattaatggtgtcggcgtgtca 4786406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 251 - 338
Target Start/End: Complemental strand, 7658520 - 7658433
Alignment:
Q  251 acaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtcaatgtttgtgtcgtttccgatg 338  Q
    ||||||||| | ||| ||||||| ||| |||| ||||| |||||||||||||||||||||||| || |||| ||||| || |||||||    
T  7658520 acaccgacaaatataattacactgaattatgtaattttctcaaattattagtggtgtcggcgtatcgatgtctgtgttgtatccgatg 7658433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 246 - 313
Target Start/End: Original strand, 11927083 - 11927150
Alignment:
Q  246 acacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgt 313  Q
    |||||||||||||||| ||| ||||||| ||| ||||||||||||||||||||||   ||||||||||    
T  11927083 acacgacaccgacacatataattacactgaattatgtgattttatcaaattattaacagtgtcggcgt 11927150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 249 - 316
Target Start/End: Original strand, 13844596 - 13844663
Alignment:
Q  249 cgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtc 316  Q
    ||||||||||||| ||| ||||||| ||| |||||||||| ||||||||||||  |||||||||||||    
T  13844596 cgacaccgacacatataattacactcaattatgtgattttctcaaattattagcagtgtcggcgtgtc 13844663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 244 - 335
Target Start/End: Original strand, 24362197 - 24362288
Alignment:
Q  244 cgacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtcaatgtttgtgtcgtttccg 335  Q
    ||||||||||  |||||| ||| ||||||| ||| |||||||| | |||||||||||| ||||||||||||||  ||| |||||||| ||||    
T  24362197 cgacacgacattgacacatataattacactgaattatgtgattctctcaaattattagcggtgtcggcgtgtcggtgtctgtgtcgtatccg 24362288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 270 - 321
Target Start/End: Complemental strand, 27101553 - 27101502
Alignment:
Q  270 cactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtcaatgt 321  Q
    |||||||| |||||||||| |||||||||||| |||||||||||||||||||    
T  27101553 cactaaattatgtgattttttcaaattattagcggtgtcggcgtgtcaatgt 27101502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 246 - 315
Target Start/End: Complemental strand, 11944727 - 11944658
Alignment:
Q  246 acacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgt 315  Q
    |||||||||||||||| ||| ||||||| | | ||||||||||||||||||||||   ||||||||||||    
T  11944727 acacgacaccgacacatataattacactgagttatgtgattttatcaaattattaacagtgtcggcgtgt 11944658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 220 - 316
Target Start/End: Original strand, 2572027 - 2572123
Alignment:
Q  220 tcggacgcgtgtcatgttcaacagcgacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtc 316  Q
    |||||| |||||| ||| | |||  ||||||||||||||||   || ||||||||||| |||||||||| ||||||||||||  |||||| ||||||    
T  2572027 tcggacacgtgtcgtgtccgacacagacacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattaggtgtgtcgacgtgtc 2572123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 249 - 316
Target Start/End: Complemental strand, 34897144 - 34897077
Alignment:
Q  249 cgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtc 316  Q
    ||||| ||||||| ||| ||||||| ||| |||||||||| |||||||||||| ||||||| ||||||    
T  34897144 cgacatcgacacatataattacactgaattatgtgattttctcaaattattagcggtgtcgacgtgtc 34897077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 216 - 335
Target Start/End: Original strand, 22197709 - 22197828
Alignment:
Q  216 ggtgtcggacgcgtgtcatgttcaacagcgacac-gacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtg 314  Q
    |||||||||| |||||||||| | ||| |||||| ||||| |||||   || ||||||||||| |||||| ||| ||||||||||||  |||| ||||||    
T  22197709 ggtgtcggacacgtgtcatgtccgaca-cgacactgacactgacacttgtaattacactaaattatgtgaatttttcaaattattagctgtgttggcgtg 22197807  T
Q  315 tcaatgtttgtgtcgtttccg 335  Q
    | | ||| |||||||| ||||    
T  22197808 ttagtgtctgtgtcgtgtccg 22197828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 301
Target Start/End: Original strand, 25172694 - 25172750
Alignment:
Q  245 gacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattag 301  Q
    ||||||||||||||||| ||| ||||| ||||  |||| ||||||||||||||||||    
T  25172694 gacacgacaccgacacatataattacattaaaatatgtaattttatcaaattattag 25172750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 316
Target Start/End: Original strand, 29447105 - 29447177
Alignment:
Q  244 cgacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtc 316  Q
    ||||| |||||||||||   |||||||| | ||| |||||||||| ||||||||||||| |||||| ||||||    
T  29447105 cgacatgacaccgacacttgtagttacattgaattatgtgattttctcaaattattagttgtgtcgacgtgtc 29447177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 316
Target Start/End: Original strand, 31236580 - 31236644
Alignment:
Q  252 caccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtc 316  Q
    |||||||||| ||| ||||| | ||| |||||||||| ||||||||||||  |||||||||||||    
T  31236580 caccgacacatataattacattgaattatgtgattttctcaaattattagcagtgtcggcgtgtc 31236644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 335
Target Start/End: Original strand, 29510271 - 29510390
Alignment:
Q  216 ggtgtcggacgcgtgtcatgttcaacagcgacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgt 315  Q
    |||||||||| || ||| ||| | ||| |||||| ||||||||||   || ||| ||| |||  ||||||||| ||||||||||||  ||||||||||||    
T  29510271 ggtgtcggacacgcgtcgtgtccgacaccgacactacaccgacacttgtaattatactgaattttgtgattttttcaaattattagctgtgtcggcgtgt 29510370  T
Q  316 caatgtttgtgtcgtttccg 335  Q
    || |||  ||||||| ||||    
T  29510371 cagtgtccgtgtcgtgtccg 29510390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 249 - 300
Target Start/End: Original strand, 33405384 - 33405435
Alignment:
Q  249 cgacaccgacacaaatagttacactaaatcatgtgattttatcaaattatta 300  Q
    ||||||||||||| ||| ||||||||||| ||||| |||| |||||||||||    
T  33405384 cgacaccgacacatataattacactaaattatgtgtttttctcaaattatta 33405435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 250 - 316
Target Start/End: Complemental strand, 14134757 - 14134691
Alignment:
Q  250 gacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtc 316  Q
    |||||||||| | ||| ||||||| ||| |||||||||| |||||||||||||  ||||| ||||||    
T  14134757 gacaccgacatatataattacactgaattatgtgattttctcaaattattagtattgtcgacgtgtc 14134691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 249 - 335
Target Start/End: Complemental strand, 20873128 - 20873042
Alignment:
Q  249 cgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtcaatgtttgtgtcgtttccg 335  Q
    ||||||||||||   || ||||||||||| |||||||||| |||||||||||    ||||||||||||| |||  ||||||| ||||    
T  20873128 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattatctatgtcggcgtgtcagtgtccgtgtcgtgtccg 20873042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 267 - 317
Target Start/End: Original strand, 36450772 - 36450822
Alignment:
Q  267 ttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtca 317  Q
    ||||||| |||  ||||||||| ||||||||||||| ||||||||||||||    
T  36450772 ttacactgaattctgtgattttttcaaattattagttgtgtcggcgtgtca 36450822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 309
Target Start/End: Original strand, 7472514 - 7472575
Alignment:
Q  248 acgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcg 309  Q
    ||||||| |||||| ||| ||||||||| | |||||||||  | ||||||||||||||||||    
T  7472514 acgacacagacacatataattacactaatttatgtgatttctttaaattattagtggtgtcg 7472575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 301
Target Start/End: Complemental strand, 8343032 - 8342979
Alignment:
Q  248 acgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattag 301  Q
    |||||||||||||   || ||||||||||| |||||||||| ||||||||||||    
T  8343032 acgacaccgacacttgtaattacactaaattatgtgattttttcaaattattag 8342979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 244 - 301
Target Start/End: Complemental strand, 34223011 - 34222954
Alignment:
Q  244 cgacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattag 301  Q
    |||||| | ||||||||| ||| ||||||| ||| |||||||||||| ||||||||||    
T  34223011 cgacaccataccgacacatataattacacttaattatgtgattttattaaattattag 34222954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 282 - 338
Target Start/End: Original strand, 4673458 - 4673514
Alignment:
Q  282 tgattttatcaaattattagtggtgtcggcgtgtcaatgtttgtgtcgtttccgatg 338  Q
    ||||||| |||||||||||   |||||||||||||| ||| |||||||| |||||||    
T  4673458 tgattttttcaaattattatctgtgtcggcgtgtcagtgtctgtgtcgtgtccgatg 4673514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 257 - 301
Target Start/End: Complemental strand, 14731763 - 14731719
Alignment:
Q  257 acacaaatagttacactaaatcatgtgattttatcaaattattag 301  Q
    ||||| ||| ||||||||||| |||||||||| ||||||||||||    
T  14731763 acacatataattacactaaattatgtgattttctcaaattattag 14731719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 244 - 308
Target Start/End: Original strand, 16641969 - 16642033
Alignment:
Q  244 cgacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtc 308  Q
    |||||||||||||||||| |||   ||||||||| |||||  ||| ||||||||||||| |||||    
T  16641969 cgacacgacaccgacacatataacgacactaaattatgtgtatttctcaaattattagttgtgtc 16642033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 280 - 316
Target Start/End: Original strand, 24196628 - 24196664
Alignment:
Q  280 tgtgattttatcaaattattagtggtgtcggcgtgtc 316  Q
    ||||||||| ||||||||||||| |||||||||||||    
T  24196628 tgtgattttttcaaattattagttgtgtcggcgtgtc 24196664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 249 - 317
Target Start/End: Original strand, 31109518 - 31109586
Alignment:
Q  249 cgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtca 317  Q
    |||||| |||||| ||||||| ||| |||  | ||||||| |||||||||||  |||||||||||||||    
T  31109518 cgacactgacacatatagttagactgaattgtttgattttctcaaattattaacggtgtcggcgtgtca 31109586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 48; Significance: 3e-18; HSPs: 60)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 190 - 317
Target Start/End: Complemental strand, 16766815 - 16766688
Alignment:
Q  190 gacattcatcggattagacatgttcgggtgtcggacgcgtgtcatgttcaacagcgacacgacaccgacacaaatagttacactaaatcatgtgatttta 289  Q
    ||||||| ||||||||| | ||| | |||||||||| |||||  ||| | ||| |||||||||||||||||   || ||||||| ||| ||||||||||     
T  16766815 gacattcttcggattaggcgtgtcccggtgtcggacacgtgttgtgtccgacaccgacacgacaccgacacttgtaattacactgaattatgtgattttt 16766716  T
Q  290 tcaaattattagtggtgtcggcgtgtca 317  Q
    ||||||||||||  ||||||||||||||    
T  16766715 tcaaattattagctgtgtcggcgtgtca 16766688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 244 - 335
Target Start/End: Original strand, 17327650 - 17327741
Alignment:
Q  244 cgacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtcaatgtttgtgtcgtttccg 335  Q
    ||||||||||| |||||| ||||||||||||||| |||||||||| ||||| | ||||| |||||||||| ||| ||| | |||||| ||||    
T  17327650 cgacacgacactgacacatatagttacactaaattatgtgattttctcaaaatcttagttgtgtcggcgtatcactgtctatgtcgtgtccg 17327741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 245 - 335
Target Start/End: Complemental strand, 9027241 - 9027151
Alignment:
Q  245 gacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtcaatgtttgtgtcgtttccg 335  Q
    ||||||||||||||||| ||| ||||||  ||| |||||||| | |||||||||||| ||||||||||||||| |||  ||||||| ||||    
T  9027241 gacacgacaccgacacatataattacacggaattatgtgattatctcaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtccg 9027151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 249 - 350
Target Start/End: Complemental strand, 34595193 - 34595092
Alignment:
Q  249 cgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtcaatgtttgtgtcgtttccgatgcctgtgcttc 348  Q
    ||||||||||||   || ||||||| ||| |||||||||| ||||||||||||| |||||||||||||| |||  ||||||| |||| || | |||||||    
T  34595193 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagttgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgtgcttc 34595094  T
Q  349 at 350  Q
    ||    
T  34595093 at 34595092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 249 - 317
Target Start/End: Original strand, 5732510 - 5732578
Alignment:
Q  249 cgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtca 317  Q
    ||||||||||||| ||| ||||||||||  |||||||||| |||||||||||  |||||||||||||||    
T  5732510 cgacaccgacacatataattacactaaaatatgtgattttctcaaattattaacggtgtcggcgtgtca 5732578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 249 - 317
Target Start/End: Original strand, 7265593 - 7265661
Alignment:
Q  249 cgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtca 317  Q
    ||||||||||||| ||| ||||||| ||| |||||||||| |||||||||||| ||||| |||||||||    
T  7265593 cgacaccgacacatataattacactgaattatgtgattttctcaaattattagcggtgttggcgtgtca 7265661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 249 - 317
Target Start/End: Complemental strand, 19040411 - 19040343
Alignment:
Q  249 cgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtca 317  Q
    |||||| |||||| ||| ||||||| ||| |||||||||| |||||||||||| |||||||||||||||    
T  19040411 cgacacagacacatataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtca 19040343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 249 - 319
Target Start/End: Complemental strand, 9629442 - 9629372
Alignment:
Q  249 cgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtcaat 319  Q
    ||||||||||||| ||| ||||| | ||| |||||||||| |||||||||| | |||||||||||||||||    
T  9629442 cgacaccgacacatataattacattgaattatgtgattttctcaaattattggcggtgtcggcgtgtcaat 9629372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 251 - 321
Target Start/End: Original strand, 26178683 - 26178753
Alignment:
Q  251 acaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtcaatgt 321  Q
    ||||||||||| ||  ||||||||||| |||||||||||||||||||||||  ||| |||| |||||||||    
T  26178683 acaccgacacatatgattacactaaattatgtgattttatcaaattattagaagtgacggcttgtcaatgt 26178753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 234 - 316
Target Start/End: Complemental strand, 26562763 - 26562681
Alignment:
Q  234 tgttcaacagcgacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtc 316  Q
    ||||| ||| |||||||||| ||||||| ||| ||||||| ||| |||||||||| ||||||| ||||  |||||||||||||    
T  26562763 tgttcgacaccgacacgacatcgacacatataattacactgaattatgtgattttctcaaatttttagcagtgtcggcgtgtc 26562681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 245 - 330
Target Start/End: Complemental strand, 7086858 - 7086773
Alignment:
Q  245 gacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtcaatgtttgtgtcgt 330  Q
    ||||| ||||||||||| ||| ||||||||||| |||||||||| ||||||||||||  ||| || ||||||  ||| ||||||||    
T  7086858 gacactacaccgacacatataattacactaaattatgtgattttctcaaattattagcagtgccgacgtgtcggtgtctgtgtcgt 7086773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 217 - 330
Target Start/End: Original strand, 8365487 - 8365600
Alignment:
Q  217 gtgtcggacgcgtgtcatgttcaacagcgacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtc 316  Q
    ||||||||| |||||| ||| | | | |||||||||||||||||   || ||||||  ||| ||||||| || ||||||||||||| |||||||||||||    
T  8365487 gtgtcggacacgtgtcgtgtccgataccgacacgacaccgacacttgtaattacaccgaattatgtgatattttcaaattattagttgtgtcggcgtgtc 8365586  T
Q  317 aatgtttgtgtcgt 330  Q
    | |||  |||||||    
T  8365587 agtgtccgtgtcgt 8365600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 267 - 316
Target Start/End: Complemental strand, 10842573 - 10842524
Alignment:
Q  267 ttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtc 316  Q
    ||||||||||| |||||||||| |||||||||||| ||||||||||||||    
T  10842573 ttacactaaattatgtgattttttcaaattattagcggtgtcggcgtgtc 10842524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 245 - 301
Target Start/End: Original strand, 9025490 - 9025546
Alignment:
Q  245 gacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattag 301  Q
    ||||||||||||||||| ||| ||||||| ||| |||||||||| ||||||||||||    
T  9025490 gacacgacaccgacacatataattacactgaattatgtgattttctcaaattattag 9025546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 245 - 317
Target Start/End: Original strand, 10770670 - 10770742
Alignment:
Q  245 gacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtca 317  Q
    ||||||||||||||||   || ||||||| ||| |||||||||| ||||||||||||| |||| |||||||||    
T  10770670 gacacgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagttgtgttggcgtgtca 10770742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 244 - 308
Target Start/End: Original strand, 10888969 - 10889033
Alignment:
Q  244 cgacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtc 308  Q
    |||||||||||  ||||| ||| | ||||||||| ||||||||||||||||||||||| ||||||    
T  10888969 cgacacgacactaacacatataatcacactaaattatgtgattttatcaaattattagcggtgtc 10889033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 279 - 335
Target Start/End: Complemental strand, 16833337 - 16833281
Alignment:
Q  279 atgtgattttatcaaattattagtggtgtcggcgtgtcaatgtttgtgtcgtttccg 335  Q
    |||||||||| ||||||||||||| |||||||||||||| ||| |||||||| ||||    
T  16833337 atgtgattttttcaaattattagttgtgtcggcgtgtcagtgtctgtgtcgtgtccg 16833281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 245 - 317
Target Start/End: Complemental strand, 19044527 - 19044455
Alignment:
Q  245 gacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtca 317  Q
    |||| |||||||||||| ||| | ||||| ||| ||||||| || ||||||||||||| ||||||||||||||    
T  19044527 gacatgacaccgacacatataataacactgaattatgtgatattctcaaattattagtcgtgtcggcgtgtca 19044455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 249 - 321
Target Start/End: Original strand, 20371110 - 20371182
Alignment:
Q  249 cgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtcaatgt 321  Q
    ||||||||||||| ||| | ||| | | | |||||||||| |||||||||||| |||||||||||||||||||    
T  20371110 cgacaccgacacatataatcacattgagttatgtgattttctcaaattattagcggtgtcggcgtgtcaatgt 20371182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 249 - 317
Target Start/End: Original strand, 33001289 - 33001357
Alignment:
Q  249 cgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtca 317  Q
    ||||||||||||| ||| ||||| | ||| |||||||||| ||||||||||||  ||||||||||||||    
T  33001289 cgacaccgacacatataattacatttaattatgtgattttttcaaattattagcagtgtcggcgtgtca 33001357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 245 - 328
Target Start/End: Original strand, 34290075 - 34290156
Alignment:
Q  245 gacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtcaatgtttgtgtc 328  Q
    |||||||||||||||||  || ||||||| ||| |||||||| |  |||||||||||| |||||||| ||||| ||||||||||    
T  34290075 gacacgacaccgacaca--taattacactgaattatgtgattctcgcaaattattagttgtgtcggcatgtcagtgtttgtgtc 34290156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 248 - 327
Target Start/End: Original strand, 34447359 - 34447436
Alignment:
Q  248 acgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtcaatgtttgtgt 327  Q
    ||||||||||||||||   ||||||||||| || |||||||||||||||||||  ||||| ||||||||| ||| |||||    
T  34447359 acgacaccgacacaaaa--ttacactaaattatatgattttatcaaattattaacggtgttggcgtgtcattgtctgtgt 34447436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 250 - 317
Target Start/End: Complemental strand, 7938174 - 7938107
Alignment:
Q  250 gacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtca 317  Q
    |||||||||||  ||| ||||||||||| || ||||||| ||||||||||||  ||||||||||||||    
T  7938174 gacaccgacacttataattacactaaattatatgattttttcaaattattagctgtgtcggcgtgtca 7938107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 246 - 301
Target Start/End: Original strand, 9195751 - 9195806
Alignment:
Q  246 acacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattag 301  Q
    |||||||||||||||| ||| ||||||||||| |||| ||||| ||||||||||||    
T  9195751 acacgacaccgacacatataattacactaaattatgtcattttctcaaattattag 9195806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 251 - 330
Target Start/End: Complemental strand, 9658936 - 9658857
Alignment:
Q  251 acaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtcaatgtttgtgtcgt 330  Q
    ||||||||| | ||| ||||||| ||| |||||||||| | |||||||||| ||||||||||||||| |||  |||||||    
T  9658936 acaccgacaaatataattacactgaattatgtgattttcttaaattattagcggtgtcggcgtgtcagtgtccgtgtcgt 9658857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 267 - 338
Target Start/End: Complemental strand, 25096464 - 25096393
Alignment:
Q  267 ttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtcaatgtttgtgtcgtttccgatg 338  Q
    |||||||| || |||||||||| |||||||||||||||||||| ||||||  ||| ||||| || |||||||    
T  25096464 ttacactagattatgtgattttctcaaattattagtggtgtcgtcgtgtcggtgtctgtgttgtatccgatg 25096393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 198 - 260
Target Start/End: Complemental strand, 3209498 - 3209436
Alignment:
Q  198 tcggattagacatgttcgggtgtcggacgcgtgtcatgttcaacagcgacacgacaccgacac 260  Q
    ||||||||| | ||| ||||||||||||||||||| ||||| |||  ||||||||||||||||    
T  3209498 tcggattaggcgtgtccgggtgtcggacgcgtgtcgtgttcgacactgacacgacaccgacac 3209436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 247 - 313
Target Start/End: Complemental strand, 7151473 - 7151407
Alignment:
Q  247 cacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgt 313  Q
    ||||||||| ||||| ||| ||||||| ||| |||||||||| |||||||||||| ||||| |||||    
T  7151473 cacgacaccaacacatataattacacttaattatgtgattttttcaaattattagaggtgttggcgt 7151407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 250 - 316
Target Start/End: Original strand, 13360373 - 13360439
Alignment:
Q  250 gacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtc 316  Q
    |||||||| ||| ||| ||||||| ||| |||||||||| |||||||| ||||||||||| ||||||    
T  13360373 gacaccgaaacatataattacactgaattatgtgattttctcaaattactagtggtgtcgacgtgtc 13360439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 267 - 317
Target Start/End: Original strand, 17341682 - 17341732
Alignment:
Q  267 ttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtca 317  Q
    ||||||| ||| ||||||||||||||||||||||  |||||||||||||||    
T  17341682 ttacactgaattatgtgattttatcaaattattaacggtgtcggcgtgtca 17341732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 267 - 317
Target Start/End: Original strand, 17841607 - 17841657
Alignment:
Q  267 ttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtca 317  Q
    ||||||||||| |||||||||| ||||||||||||  ||||||||||||||    
T  17841607 ttacactaaattatgtgattttttcaaattattagctgtgtcggcgtgtca 17841657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 244 - 313
Target Start/End: Complemental strand, 6665277 - 6665208
Alignment:
Q  244 cgacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgt 313  Q
    |||||||| ||||||||||||| |||| || ||| |||||||||  |||||||||||| ||| |||||||    
T  6665277 cgacacgataccgacacaaataattactctgaattatgtgatttactcaaattattagcggtttcggcgt 6665208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 244 - 317
Target Start/End: Complemental strand, 32313468 - 32313395
Alignment:
Q  244 cgacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtca 317  Q
    |||||||||||| ||||| ||| || || | |||||||| ||||| |||| |||||| ||||||||||||||||    
T  32313468 cgacacgacacccacacatataattgcattgaatcatgttattttctcaacttattattggtgtcggcgtgtca 32313395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 317
Target Start/End: Original strand, 853859 - 853927
Alignment:
Q  249 cgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtca 317  Q
    ||||||||||||   || || |||| ||| |||||||||| ||||||||||||| ||||||||||||||    
T  853859 cgacaccgacacttgtaattgcacttaattatgtgattttttcaaattattagttgtgtcggcgtgtca 853927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 335
Target Start/End: Original strand, 8776991 - 8777059
Alignment:
Q  267 ttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtcaatgtttgtgtcgtttccg 335  Q
    ||||||| |||  ||||||||| ||||||||||||| |||||||||||||| |||  ||||||| ||||    
T  8776991 ttacactgaattttgtgattttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtccg 8777059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 249 - 300
Target Start/End: Original strand, 403864 - 403915
Alignment:
Q  249 cgacaccgacacaaatagttacactaaatcatgtgattttatcaaattatta 300  Q
    ||||||||||||   |||||||||||||| |||||||||| |||||||||||    
T  403864 cgacaccgacacttgtagttacactaaattatgtgattttttcaaattatta 403915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 258 - 330
Target Start/End: Complemental strand, 1532290 - 1532216
Alignment:
Q  258 cacaaatagttacactaaatcatgtgattttatcaaattattagtg--gtgtcggcgtgtcaatgtttgtgtcgt 330  Q
    |||| ||| ||||||| ||| |||| |||||||||||||||||| |  |||||| ||||||| ||||||||||||    
T  1532290 cacatataattacactgaattatgtaattttatcaaattattagcggtgtgtcgacgtgtcagtgtttgtgtcgt 1532216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 267 - 330
Target Start/End: Complemental strand, 1681799 - 1681736
Alignment:
Q  267 ttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtcaatgtttgtgtcgt 330  Q
    ||||||| ||| | |||||||| ||||||||||||| |||||||||||| | ||| ||||||||    
T  1681799 ttacactgaattacgtgattttttcaaattattagttgtgtcggcgtgttagtgtatgtgtcgt 1681736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 249 - 316
Target Start/End: Complemental strand, 7378038 - 7377971
Alignment:
Q  249 cgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtc 316  Q
    ||||||||||||| ||| ||||| | ||| |||||||||| ||||||| |||| |||||||| |||||    
T  7378038 cgacaccgacacatataattacattgaattatgtgattttctcaaatttttagcggtgtcggggtgtc 7377971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 244 - 315
Target Start/End: Original strand, 9107365 - 9107436
Alignment:
Q  244 cgacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgt 315  Q
    |||||||||||||||||   || ||||||| |||  ||||||||| ||||||||||||  ||||||||||||    
T  9107365 cgacacgacaccgacacttgtaattacactgaattttgtgattttttcaaattattagctgtgtcggcgtgt 9107436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 244 - 335
Target Start/End: Complemental strand, 12696388 - 12696297
Alignment:
Q  244 cgacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtcaatgtttgtgtcgtttccg 335  Q
    ||||||||||| |||||   || ||||||| ||| |||| ||||| ||||||||||||  |||||||||||||| |||  ||||||| ||||    
T  12696388 cgacacgacactgacacttgtaattacactgaattatgtaattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccg 12696297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 245 - 316
Target Start/End: Original strand, 21395304 - 21395374
Alignment:
Q  245 gacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtc 316  Q
    ||||||||||||||||   || ||||||||||| |||| ||||| |||||||||||| ||||| ||||||||    
T  21395304 gacacgacaccgacacttgtaattacactaaattatgt-attttctcaaattattagcggtgttggcgtgtc 21395374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 249 - 315
Target Start/End: Original strand, 7801156 - 7801222
Alignment:
Q  249 cgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgt 315  Q
    ||||||||||||   || |||| || ||| |||||||||| ||||||||||||| ||||||||||||    
T  7801156 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggcgtgt 7801222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 245 - 330
Target Start/End: Original strand, 8805570 - 8805653
Alignment:
Q  245 gacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtcaatgtttgtgtcgt 330  Q
    ||||| |||||||||||  || ||||||||||| |||||||||| ||||||||||||  ||| || ||||||  ||| ||||||||    
T  8805570 gacactacaccgacaca--taattacactaaattatgtgattttctcaaattattagcagtgccgacgtgtcggtgtctgtgtcgt 8805653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 217 - 322
Target Start/End: Original strand, 10339093 - 10339199
Alignment:
Q  217 gtgtcggacgcgtgtcatgttcaacagcgacacgacaccgacacaaatagtta-cactaaatcatgtgattttatcaaattattagtggtgtcggcgtgt 315  Q
    |||||||||  ||||| ||| | ||| ||||||| ||| |||||| ||| ||| |||| ||| |||||||||| |||||||| | | |||||||||||||    
T  10339093 gtgtcggacatgtgtcgtgtccgacaccgacacggcactgacacatataattaacactgaattatgtgattttctcaaattaatcgcggtgtcggcgtgt 10339192  T
Q  316 caatgtt 322  Q
    || ||||    
T  10339193 cagtgtt 10339199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 244 - 330
Target Start/End: Original strand, 34073342 - 34073428
Alignment:
Q  244 cgacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtcaatgtttgtgtcgt 330  Q
    ||||||||||||||| || ||| ||||||| ||| ||| |||||| |||||||||||| | ||| ||| ||||| |||  |||||||    
T  34073342 cgacacgacaccgacccatataattacactgaattatgagattttctcaaattattagcgatgttggcatgtcagtgtccgtgtcgt 34073428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 313
Target Start/End: Complemental strand, 7027301 - 7027236
Alignment:
Q  249 cgacaccgacacaaatagttacactaaatcatgtga-ttttatcaaattattagtggtgtcggcgt 313  Q
    ||||||||||||| ||| ||||||| ||| |||||| |||| ||||||||| || |||||||||||    
T  7027301 cgacaccgacacatataattacactgaattatgtgatttttttcaaattatcaggggtgtcggcgt 7027236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 293 - 338
Target Start/End: Original strand, 18803555 - 18803600
Alignment:
Q  293 aattattagtggtgtcggcgtgtcaatgtttgtgtcgtttccgatg 338  Q
    ||||||||| ||||||||| ||||| |||||||||||| |||||||    
T  18803555 aattattagcggtgtcggcatgtcagtgtttgtgtcgtgtccgatg 18803600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 244 - 313
Target Start/End: Original strand, 32320664 - 32320733
Alignment:
Q  244 cgacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgt 313  Q
    |||||||||||||| ||| ||| | ||| | ||| ||||||||||||||||||||||  |||||| ||||    
T  32320664 cgacacgacaccgatacatataatgacattgaattatgtgattttatcaaattattaacggtgtcagcgt 32320733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 246 - 330
Target Start/End: Complemental strand, 3398680 - 3398597
Alignment:
Q  246 acacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtcaatgtttgtgtcgt 330  Q
    |||||||||||| ||  ||| ||||||| ||| || ||||||| ||||||||||||  |||||||||||||| |||  |||||||    
T  3398680 acacgacaccgatacttataattacactgaattatatgatttt-tcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgt 3398597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 198 - 306
Target Start/End: Complemental strand, 7248468 - 7248360
Alignment:
Q  198 tcggattagacatgttcgggtgtcggacgcgtgtcatgttcaacagcgacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaatta 297  Q
    ||||||| ||| ||| | |||||||||| | |||  ||| ||||| ||||||||| || ||||| ||| |||| || ||| |||||||||  ||| ||||    
T  7248468 tcggatttgacgtgtcccggtgtcggacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaattatgtgatttcctcagatta 7248369  T
Q  298 ttagtggtg 306  Q
    |||||||||    
T  7248368 ttagtggtg 7248360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 245 - 317
Target Start/End: Complemental strand, 7930368 - 7930296
Alignment:
Q  245 gacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtca 317  Q
    ||||||||||||||||    | || |||||||| |||||||||| ||||||||||| | |||||||| |||||    
T  7930368 gacacgacaccgacacttgaaatttcactaaattatgtgattttttcaaattattaattgtgtcggcatgtca 7930296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 249 - 317
Target Start/End: Original strand, 7977830 - 7977898
Alignment:
Q  249 cgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtca 317  Q
    ||||||||||||   || ||||||| ||| |||| ||||| ||||||||||||  ||||||||||||||    
T  7977830 cgacaccgacacttgtaattacactgaattatgtaattttttcaaattattagctgtgtcggcgtgtca 7977898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 249 - 317
Target Start/End: Original strand, 7996378 - 7996446
Alignment:
Q  249 cgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtca 317  Q
    |||||||||| || ||| ||||||| ||| || ||||||| ||||||||||||  |||||||| |||||    
T  7996378 cgacaccgacgcatataattacactgaattatatgattttctcaaattattagcagtgtcggcatgtca 7996446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 249 - 317
Target Start/End: Complemental strand, 8022423 - 8022355
Alignment:
Q  249 cgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtca 317  Q
    |||||||||| || ||| ||||||| ||| || ||||||| ||||||||||||  |||||||| |||||    
T  8022423 cgacaccgacgcatataattacactgaattatatgattttctcaaattattagcagtgtcggcatgtca 8022355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 248 - 300
Target Start/End: Complemental strand, 9617494 - 9617442
Alignment:
Q  248 acgacaccgacacaaatagttacactaaatcatgtgattttatcaaattatta 300  Q
    |||||||||||||| ||| ||||| | ||| |||||||||| |||||||||||    
T  9617494 acgacaccgacacatataattacattgaattatgtgattttctcaaattatta 9617442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 279 - 335
Target Start/End: Complemental strand, 10649357 - 10649301
Alignment:
Q  279 atgtgattttatcaaattattagtggtgtcggcgtgtcaatgtttgtgtcgtttccg 335  Q
    |||| |||||||||||||| ||  ||||||||||| ||| |||||||||||| ||||    
T  10649357 atgtaattttatcaaattactaacggtgtcggcgtatcattgtttgtgtcgtatccg 10649301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 250 - 330
Target Start/End: Original strand, 11784217 - 11784297
Alignment:
Q  250 gacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtcaatgtttgtgtcgt 330  Q
    |||||||||| | ||| ||||||| | |||||||||||| |||||||||||   |||| ||||||||  ||| ||||||||    
T  11784217 gacaccgacatatataattacactgattcatgtgattttctcaaattattatatgtgtgggcgtgtcggtgtctgtgtcgt 11784297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 250 - 330
Target Start/End: Complemental strand, 13851794 - 13851714
Alignment:
Q  250 gacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtcaatgtttgtgtcgt 330  Q
    |||| ||||||| ||| ||||||| ||| | || ||||| |||||||||||| ||||||| ||||||| |||  |||||||    
T  13851794 gacatcgacacatataattacactgaattacgttattttctcaaattattagcggtgtcgacgtgtcagtgtccgtgtcgt 13851714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 249 - 313
Target Start/End: Original strand, 21924935 - 21924999
Alignment:
Q  249 cgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgt 313  Q
    ||||||||||||| ||| ||||||| ||| || |||| || ||||||||||||  ||||||||||    
T  21924935 cgacaccgacacatataattacactgaattatttgatattctcaaattattagcagtgtcggcgt 21924999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 216 - 317
Target Start/End: Complemental strand, 53272 - 53171
Alignment:
Q  216 ggtgtcggacgcgtgtcatgttcaacagcgacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgt 315  Q
    |||||||||| |||||||||| | ||| ||||||| |||||||||  ||| ||||||| ||| |||||||||| |||||||||| | ||| |||||||||    
T  53272 ggtgtcggacacgtgtcatgtccgacaccgacacggcaccgacacttataattacactgaattatgtgattttctcaaattattggcggtatcggcgtgt 53173  T
Q  316 ca 317  Q
    ||    
T  53172 ca 53171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 4e-17; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 246 - 335
Target Start/End: Complemental strand, 11666006 - 11665917
Alignment:
Q  246 acacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtcaatgtttgtgtcgtttccg 335  Q
    |||||||||||||||| ||| |||||||||||  |||||||||||||||||||||| | |||||| |||| | ||| |||||||| ||||    
T  11666006 acacgacaccgacacatataattacactaaattgtgtgattttatcaaattattagcgttgtcggtgtgttagtgtgtgtgtcgtgtccg 11665917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 198 - 322
Target Start/End: Original strand, 4987240 - 4987364
Alignment:
Q  198 tcggattagacatgttcgggtgtcggacgcgtgtcatgttcaacagcgacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaatta 297  Q
    ||||||||| | ||| | |||||||||| |||||| ||| ||||| ||||||| |||| ||||   || ||||||| ||| |||||||||| ||||||||    
T  4987240 tcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccaacaccgacacgtcaccaacacttgtaattacactgaattatgtgattttttcaaatta 4987339  T
Q  298 ttagtggtgtcggcgtgtcaatgtt 322  Q
    ||||  |||||||||||||| ||||    
T  4987340 ttagctgtgtcggcgtgtcagtgtt 4987364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 267 - 335
Target Start/End: Complemental strand, 25064950 - 25064882
Alignment:
Q  267 ttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtcaatgtttgtgtcgtttccg 335  Q
    ||||||||||| |||||||||| |||||| ||||| ||||||||||||||||||| |||||||| ||||    
T  25064950 ttacactaaattatgtgattttttcaaatcattagcggtgtcggcgtgtcaatgtctgtgtcgtgtccg 25064882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 216 - 319
Target Start/End: Original strand, 8039802 - 8039905
Alignment:
Q  216 ggtgtcggacgcgtgtcatgttcaacagcgacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgt 315  Q
    ||||||||||  || |||||| | ||| |||||||||||||||||| ||| ||||||| ||| || | ||||| |||||||||||| ||||| |||||||    
T  8039802 ggtgtcggacatgtctcatgtccgacaccgacacgacaccgacacatataattacactgaattatataattttctcaaattattagcggtgttggcgtgt 8039901  T
Q  316 caat 319  Q
    ||||    
T  8039902 caat 8039905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 249 - 330
Target Start/End: Complemental strand, 8383316 - 8383235
Alignment:
Q  249 cgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtcaatgtttgtgtcgt 330  Q
    ||||||||||||  ||| ||||||| ||| || ||||||| |||||||||||| |||||||||||||||||||  |||||||    
T  8383316 cgacaccgacacttataattacactgaattatatgattttctcaaattattagcggtgtcggcgtgtcaatgtccgtgtcgt 8383235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 217 - 350
Target Start/End: Original strand, 41961618 - 41961751
Alignment:
Q  217 gtgtcggacgcgtgtcatgttcaacagcgacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtc 316  Q
    ||||||||| |||||| ||| | | | |||||||||||||||||   || ||||||  ||| ||||||| || ||||||||||||| ||| |||||||||    
T  41961618 gtgtcggacacgtgtcgtgtccgataccgacacgacaccgacacttgtaattacaccgaataatgtgatattttcaaattattagttgtgacggcgtgtc 41961717  T
Q  317 aatgtttgtgtcgtttccgatgcctgtgcttcat 350  Q
    | ||| |||||||| |||| || | |||||||||    
T  41961718 agtgtctgtgtcgtgtccggtgtccgtgcttcat 41961751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 247 - 317
Target Start/End: Original strand, 2620053 - 2620121
Alignment:
Q  247 cacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtca 317  Q
    ||||||||| |||||  |||||||||| ||| |||||||||| |||||| |||||||||||||||||||||    
T  2620053 cacgacaccaacaca--tagttacacttaattatgtgattttctcaaatgattagtggtgtcggcgtgtca 2620121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 249 - 335
Target Start/End: Complemental strand, 55401134 - 55401048
Alignment:
Q  249 cgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtcaatgtttgtgtcgtttccg 335  Q
    ||||||||||||   || ||||||||||| |||||||||| ||||||||||||| |||||||||| ||| |||  ||||||| ||||    
T  55401134 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagttgtgtcggcgtatcagtgtccgtgtcgtatccg 55401048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 249 - 310
Target Start/End: Complemental strand, 7928509 - 7928448
Alignment:
Q  249 cgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcgg 310  Q
    ||||||||||||| ||| ||||||| ||| |||||||||| |||||||||||| ||||||||    
T  7928509 cgacaccgacacatataattacactgaattatgtgattttttcaaattattagcggtgtcgg 7928448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 267 - 328
Target Start/End: Complemental strand, 10954993 - 10954932
Alignment:
Q  267 ttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtcaatgtttgtgtc 328  Q
    ||||||| ||| |||||||||| ||||||||||||| |||||||||||||| |||| |||||    
T  10954993 ttacactgaattatgtgattttttcaaattattagttgtgtcggcgtgtcagtgttcgtgtc 10954932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 249 - 330
Target Start/End: Original strand, 16000016 - 16000097
Alignment:
Q  249 cgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtcaatgtttgtgtcgt 330  Q
    ||||||||||||   |||||||||| ||| |||| ||||| | ||||||||||| |||||||||||||| ||| ||||||||    
T  16000016 cgacaccgacacttgtagttacactgaattatgttatttttttaaattattagttgtgtcggcgtgtcagtgtctgtgtcgt 16000097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 256 - 320
Target Start/End: Original strand, 32804547 - 32804611
Alignment:
Q  256 gacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtcaatg 320  Q
    |||||| ||| ||||||||||| |||||||||| |||||||||||  ||||||||| ||||||||    
T  32804547 gacacatataattacactaaattatgtgattttctcaaattattaacggtgtcggcatgtcaatg 32804611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 228 - 316
Target Start/End: Complemental strand, 34910397 - 34910309
Alignment:
Q  228 gtgtcatgttcaacagcgacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtc 316  Q
    ||||||||| | ||| ||| ||||||||||| |   || ||||||| ||| |||||||||| ||||||||||||| |||||||||||||    
T  34910397 gtgtcatgtccgacaccgatacgacaccgactcttgtaattacactgaattatgtgattttttcaaattattagttgtgtcggcgtgtc 34910309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 249 - 316
Target Start/End: Complemental strand, 18427008 - 18426941
Alignment:
Q  249 cgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtc 316  Q
    ||||||||||| | ||| ||||||  ||| |||||||||| | |||||||||||||||||||||||||    
T  18427008 cgacaccgacatatataattacaccgaattatgtgattttttgaaattattagtggtgtcggcgtgtc 18426941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 249 - 316
Target Start/End: Original strand, 49505154 - 49505221
Alignment:
Q  249 cgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtc 316  Q
    |||||| |||||| ||| ||||||||||| |||||||||| |||||||||||| ||| || |||||||    
T  49505154 cgacactgacacatataattacactaaattatgtgattttctcaaattattagcggtctctgcgtgtc 49505221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 244 - 330
Target Start/End: Complemental strand, 9800104 - 9800018
Alignment:
Q  244 cgacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtcaatgtttgtgtcgt 330  Q
    |||||||||||||||||  | | ||||||  ||| |||| ||||| |||||||||||| ||||||||||||||| |||  |||||||    
T  9800104 cgacacgacaccgacacttacaattacacggaattatgtaattttctcaaattattagaggtgtcggcgtgtcagtgtacgtgtcgt 9800018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 249 - 335
Target Start/End: Original strand, 10335286 - 10335372
Alignment:
Q  249 cgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtcaatgtttgtgtcgtttccg 335  Q
    ||||||||||||   || ||||||||||  |||||| ||| ||||||||||||| |||||||||||||| |||  ||||||| ||||    
T  10335286 cgacaccgacacttgtatttacactaaaatatgtgactttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtccg 10335372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 244 - 310
Target Start/End: Original strand, 11313795 - 11313861
Alignment:
Q  244 cgacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcgg 310  Q
    |||||||||||  ||||| ||| ||||||||||| |||||||||| ||||||||||||  |||||||    
T  11313795 cgacacgacactaacacatataattacactaaattatgtgattttctcaaattattagcagtgtcgg 11313861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 267 - 321
Target Start/End: Original strand, 11493379 - 11493433
Alignment:
Q  267 ttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtcaatgt 321  Q
    ||||||| ||| |||||||||| ||| |||||||||||||||| |||||||||||    
T  11493379 ttacactgaattatgtgattttctcacattattagtggtgtcgacgtgtcaatgt 11493433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 218 - 316
Target Start/End: Complemental strand, 14209203 - 14209105
Alignment:
Q  218 tgtcggacgcgtgtcatgttcaacagcgacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtc 316  Q
    ||||| || |||||| ||| | ||| ||||||||||| |||||   || ||||||| ||| |||||||||| | ||||||||||| |||||||||||||    
T  14209203 tgtcgtacacgtgtcgtgtccgacaccgacacgacactgacacttgtaattacactgaattatgtgattttttaaaattattagttgtgtcggcgtgtc 14209105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 255 - 321
Target Start/End: Complemental strand, 29508497 - 29508431
Alignment:
Q  255 cgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtcaatgt 321  Q
    ||||||| ||| ||||||| ||| || ||||||| |||||||||||||||| |||| ||||||||||    
T  29508497 cgacacatataattacactgaattatatgattttttcaaattattagtggtatcggtgtgtcaatgt 29508431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 267 - 316
Target Start/End: Complemental strand, 12704048 - 12703999
Alignment:
Q  267 ttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtc 316  Q
    ||||||| ||| ||||| |||| |||||||||||||||||||||||||||    
T  12704048 ttacactgaattatgtgcttttctcaaattattagtggtgtcggcgtgtc 12703999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 246 - 307
Target Start/End: Original strand, 17005616 - 17005677
Alignment:
Q  246 acacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgt 307  Q
    |||| ||||||||||  ||| ||||||| ||| || ||||||||||||||||||||||||||    
T  17005616 acacaacaccgacacttataattacactgaattatatgattttatcaaattattagtggtgt 17005677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 317
Target Start/End: Complemental strand, 21479177 - 21479109
Alignment:
Q  249 cgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtca 317  Q
    |||||||||||| | || ||||||| |||  ||||||||| ||||||||||||  ||||||||||||||    
T  21479177 cgacaccgacactagtaattacactgaattgtgtgattttttcaaattattagctgtgtcggcgtgtca 21479109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 330
Target Start/End: Complemental strand, 28678365 - 28678281
Alignment:
Q  246 acacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtcaatgtttgtgtcgt 330  Q
    |||||||||||||||| | | ||| ||||||| |||||||||||| ||||||||||  | |||||| ||||| ||| | ||||||    
T  28678365 acacgacaccgacacatacaattatactaaattatgtgattttattaaattattagcagcgtcggcatgtcagtgtctatgtcgt 28678281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 246 - 297
Target Start/End: Original strand, 15314873 - 15314924
Alignment:
Q  246 acacgacaccgacacaaatagttacactaaatcatgtgattttatcaaatta 297  Q
    |||||||||| ||||| ||| ||||||||||| |||||||||| ||||||||    
T  15314873 acacgacaccaacacatataattacactaaattatgtgattttttcaaatta 15314924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 198 - 317
Target Start/End: Original strand, 34185072 - 34185191
Alignment:
Q  198 tcggattagacatgttcgggtgtcggacgcgtgtcatgttcaacagcgacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaatta 297  Q
    ||||||||| | ||| | |||||||||| | |||| ||| | |||  ||||||||||||||||   || ||||||| |||  ||||||||| | ||||||    
T  34185072 tcggattaggcgtgtcccggtgtcggacacatgtcttgtccgacatggacacgacaccgacacttgtaattacactgaattgtgtgattttttgaaatta 34185171  T
Q  298 ttagtggtgtcggcgtgtca 317  Q
    ||||  ||||||||||||||    
T  34185172 ttagccgtgtcggcgtgtca 34185191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 250 - 321
Target Start/End: Original strand, 48202270 - 48202341
Alignment:
Q  250 gacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtcaatgt 321  Q
    ||||| |||||| ||| ||||| ||||| |||||||||| ||||| |||||  | |||||||||||||||||    
T  48202270 gacacagacacatataattacattaaattatgtgattttctcaaactattatggatgtcggcgtgtcaatgt 48202341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 267 - 317
Target Start/End: Original strand, 10268504 - 10268554
Alignment:
Q  267 ttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtca 317  Q
    ||||||||||| |||||||||| |||||||||||   ||||||||||||||    
T  10268504 ttacactaaattatgtgattttttcaaattattaactgtgtcggcgtgtca 10268554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 238 - 328
Target Start/End: Complemental strand, 14829759 - 14829670
Alignment:
Q  238 caacagcgacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtcaatgtttgtgtc 328  Q
    ||||| |||||||||||||||||   || ||||  | ||| |||||||||| ||||||||||||  |||||||||||||| ||| ||||||    
T  14829759 caacaccgacacgacaccgacacttgtaattaccatgaattatgtgatttt-tcaaattattagctgtgtcggcgtgtcagtgtctgtgtc 14829670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 279 - 317
Target Start/End: Complemental strand, 24633795 - 24633757
Alignment:
Q  279 atgtgattttatcaaattattagtggtgtcggcgtgtca 317  Q
    |||||||||| |||||||||||||||||||||| |||||    
T  24633795 atgtgattttctcaaattattagtggtgtcggcatgtca 24633757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 279 - 317
Target Start/End: Complemental strand, 26290400 - 26290362
Alignment:
Q  279 atgtgattttatcaaattattagtggtgtcggcgtgtca 317  Q
    |||||||||| ||||||||||| ||||||||||||||||    
T  26290400 atgtgattttctcaaattattaatggtgtcggcgtgtca 26290362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 246 - 316
Target Start/End: Complemental strand, 28812577 - 28812507
Alignment:
Q  246 acacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtc 316  Q
    |||||||||||||||   ||  |||||| ||| |||||||||  ||||||||||||| |||||||||||||    
T  28812577 acacgacaccgacacttgtaactacactgaattatgtgatttcttcaaattattagttgtgtcggcgtgtc 28812507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 247 - 317
Target Start/End: Complemental strand, 28918062 - 28917992
Alignment:
Q  247 cacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtca 317  Q
    ||||||||||||||   || ||||||| ||| |||||||||| ||||||||||||   |||||||||||||    
T  28918062 cacgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctatgtcggcgtgtca 28917992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 301
Target Start/End: Complemental strand, 1509599 - 1509546
Alignment:
Q  248 acgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattag 301  Q
    |||||||||||||   || ||||||||||| |||||||||| ||||||||||||    
T  1509599 acgacaccgacacttgtaattacactaaattatgtgattttttcaaattattag 1509546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 244 - 301
Target Start/End: Original strand, 25948882 - 25948939
Alignment:
Q  244 cgacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattag 301  Q
    |||||||||||| ||||  ||| ||||||| ||| |||||||||| ||||||||||||    
T  25948882 cgacacgacaccaacacttataattacactgaattatgtgattttttcaaattattag 25948939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 245 - 313
Target Start/End: Complemental strand, 1550203 - 1550135
Alignment:
Q  245 gacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgt 313  Q
    |||||||||| |||||  ||| ||||||| |||  ||||||||| |||||||||||| ||||| |||||    
T  1550203 gacacgacactgacacctataattacactgaatagtgtgattttttcaaattattagcggtgttggcgt 1550135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 249 - 317
Target Start/End: Original strand, 8587021 - 8587089
Alignment:
Q  249 cgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtca 317  Q
    ||||||||||||   || ||||||| ||| |||||||||| |||||||| |||  ||||||||||||||    
T  8587021 cgacaccgacacttgtaattacacttaattatgtgattttttcaaattactagatgtgtcggcgtgtca 8587089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 249 - 317
Target Start/End: Original strand, 10318035 - 10318102
Alignment:
Q  249 cgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtca 317  Q
    ||||||||||||  ||| ||||||||||  |||||| ||| ||||||||||||  ||||||||||||||    
T  10318035 cgacaccgacacttatatttacactaaaa-atgtgactttttcaaattattagctgtgtcggcgtgtca 10318102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 246 - 330
Target Start/End: Complemental strand, 10455852 - 10455768
Alignment:
Q  246 acacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtcaatgtttgtgtcgt 330  Q
    |||||||||| ||||| ||| ||||||| | | || ||||||| ||| ||||||||  |||| ||||||||||||  ||||||||    
T  10455852 acacgacaccaacacatataattacacttagttatatgattttctcatattattagcagtgttggcgtgtcaatgcctgtgtcgt 10455768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 244 - 316
Target Start/End: Original strand, 16192745 - 16192817
Alignment:
Q  244 cgacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtc 316  Q
    |||||||||| | ||||| ||| ||||||| ||| |||| ||||| |||||||||||  |||||||| |||||    
T  16192745 cgacacgacatcaacacatataattacactgaattatgttattttctcaaattattaacggtgtcggtgtgtc 16192817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 244 - 316
Target Start/End: Original strand, 22774065 - 22774137
Alignment:
Q  244 cgacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtc 316  Q
    ||||| |||||||||||  ||| ||||||| ||  |||||| ||| || ||||||||||||||||| ||||||    
T  22774065 cgacatgacaccgacacttataattacactgaaatatgtgactttgtctaattattagtggtgtcgacgtgtc 22774137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 244 - 316
Target Start/End: Original strand, 49651781 - 49651853
Alignment:
Q  244 cgacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtc 316  Q
    |||||||||||||||||   || ||||| | ||| |||||||||| ||||||||||||  |||||||| ||||    
T  49651781 cgacacgacaccgacacttgtaattacagtgaattatgtgattttttcaaattattagccgtgtcggcatgtc 49651853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 249 - 335
Target Start/End: Original strand, 12895274 - 12895360
Alignment:
Q  249 cgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtcaatgtttgtgtcgtttccg 335  Q
    ||||||||||||  ||| |||||| |||| |||||||||| ||||||||||| | |||||||||||||| |||| ||||||| ||||    
T  12895274 cgacaccgacacttataattacacaaaattatgtgattttttcaaattattatttgtgtcggcgtgtcattgttcgtgtcgtatccg 12895360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 244 - 330
Target Start/End: Complemental strand, 40742655 - 40742569
Alignment:
Q  244 cgacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtcaatgtttgtgtcgt 330  Q
    |||||||||| ||||||| ||| |||||||| || || ||||||| ||||||||||| |||||||||||| |||||||  |||||||    
T  40742655 cgacacgacatcgacacatataattacactagattatatgattttctcaaattattaatggtgtcggcgtttcaatgtccgtgtcgt 40742569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 245 - 330
Target Start/End: Original strand, 5832690 - 5832775
Alignment:
Q  245 gacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtcaatgtttgtgtcgt 330  Q
    ||||| ||||| |||||||||  || |||||||||| ||||||| ||||||||||||  |||||| ||||| ||||||||||||||    
T  5832690 gacactacaccaacacaaataactatactaaatcatatgattttctcaaattattagcagtgtcgacgtgttaatgtttgtgtcgt 5832775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 217 - 330
Target Start/End: Complemental strand, 19482759 - 19482646
Alignment:
Q  217 gtgtcggacgcgtgtcatgttcaacagcgacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtc 316  Q
    ||||||||| |||||| ||| ||| | |||||||||||| ||||   || ||||||  ||| ||||||| || ||||||||||||| |||||||||||||    
T  19482759 gtgtcggacacgtgtcgtgtccaataccgacacgacaccaacacttgtaattacaccgaattatgtgatattttcaaattattagttgtgtcggcgtgtc 19482660  T
Q  317 aatgtttgtgtcgt 330  Q
    | ||| ||||||||    
T  19482659 agtgtctgtgtcgt 19482646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 244 - 309
Target Start/End: Original strand, 5775353 - 5775418
Alignment:
Q  244 cgacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcg 309  Q
    ||||| |||||||||||| ||| ||||||| ||| |||||||||| ||||||||||| ||||||||    
T  5775353 cgacatgacaccgacacatataattacacttaattatgtgattttctcaaattattaatggtgtcg 5775418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 216 - 316
Target Start/End: Original strand, 22234857 - 22234958
Alignment:
Q  216 ggtgtcggacgcgtgtcatgttcaacagcgacacgacaccgacacaaatagttacactaaatcatgtga-ttttatcaaattattagtggtgtcggcgtg 314  Q
    |||||||||| |||||| |||   ||| |||||||||||||||||| | | ||||||| ||| |||||| |||| ||||||| |||| ||||||||||||    
T  22234857 ggtgtcggacacgtgtcgtgtcagacaccgacacgacaccgacacatagaattacactgaattatgtgatttttttcaaatttttagcggtgtcggcgtg 22234956  T
Q  315 tc 316  Q
    ||    
T  22234957 tc 22234958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 257 - 317
Target Start/End: Complemental strand, 36635375 - 36635315
Alignment:
Q  257 acacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtca 317  Q
    ||||| ||| ||||||| ||| |||||||||| |||||||||||||||||| |||||||||    
T  36635375 acacatataattacactgaattatgtgattttctcaaattattagtggtgttggcgtgtca 36635315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 250 - 317
Target Start/End: Original strand, 35157986 - 35158053
Alignment:
Q  250 gacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtca 317  Q
    |||||||||||  ||| ||||||||||| ||||||||||  |||||||||||| | ||||||||||||    
T  35157986 gacaccgacacttataattacactaaattatgtgatttttccaaattattagttgcgtcggcgtgtca 35158053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 254 - 317
Target Start/End: Complemental strand, 40613504 - 40613441
Alignment:
Q  254 ccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtca 317  Q
    |||||||| ||| ||||||| ||| |||||||||| ||||| |||||| |||||||||||||||    
T  40613504 ccgacacatataattacactgaattatgtgattttctcaaaatattagcggtgtcggcgtgtca 40613441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 244 - 314
Target Start/End: Complemental strand, 13134514 - 13134444
Alignment:
Q  244 cgacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtg 314  Q
    |||||||||| ||||||| ||| ||||||||||| |||||||||| | ||||||| ||  |||||||||||    
T  13134514 cgacacgacatcgacacatataattacactaaattatgtgattttcttaaattataagcagtgtcggcgtg 13134444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 250 - 307
Target Start/End: Original strand, 7214523 - 7214580
Alignment:
Q  250 gacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgt 307  Q
    ||||||||| || ||| ||||| ||||| |||||||||| ||||||||||||||||||    
T  7214523 gacaccgacgcatataattacattaaattatgtgattttctcaaattattagtggtgt 7214580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 321
Target Start/End: Original strand, 2361975 - 2362047
Alignment:
Q  249 cgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtcaatgt 321  Q
    ||||||||||||   || ||||||||||| |||| ||||| ||||||||||||  ||||||| ||||||||||    
T  2361975 cgacaccgacacttttaattacactaaattatgtaattttttcaaattattagctgtgtcggtgtgtcaatgt 2362047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 311
Target Start/End: Complemental strand, 17446112 - 17446068
Alignment:
Q  267 ttacactaaatcatgtgattttatcaaattattagtggtgtcggc 311  Q
    ||||||||||| |||||||||| | ||||||||||||||||||||    
T  17446112 ttacactaaattatgtgattttcttaaattattagtggtgtcggc 17446068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 316
Target Start/End: Original strand, 24613652 - 24613768
Alignment:
Q  200 ggattagacatgttcgggtgtcggacgcgtgtcatgttcaacagcgacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattatt 299  Q
    ||||||||| ||| | |||||| ||| |||||| |||   ||| ||||| |||||||||||   || ||||| | ||| |||||||||| ||||||||||    
T  24613652 ggattagacgtgtcctggtgtcagacacgtgtcgtgtctgacaccgacatgacaccgacacttgtacttacattgaattatgtgattttctcaaattatt 24613751  T
Q  300 agtggtgtcggcgtgtc 316  Q
    ||| |||||| ||||||    
T  24613752 agttgtgtcgacgtgtc 24613768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 313
Target Start/End: Original strand, 54580023 - 54580087
Alignment:
Q  249 cgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgt 313  Q
    ||||||||||||  ||| ||||||| ||| |||||||||| ||||||||||||| ||||| ||||    
T  54580023 cgacaccgacacttataattacactgaattatgtgattttttcaaattattagttgtgtcagcgt 54580087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 244 - 311
Target Start/End: Complemental strand, 11931344 - 11931277
Alignment:
Q  244 cgacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggc 311  Q
    ||||| |||| ||||||| ||| ||||||||||| |||||||||| ||| |||||||  |||||||||    
T  11931344 cgacatgacatcgacacatatatttacactaaattatgtgattttttcatattattaacggtgtcggc 11931277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 249 - 316
Target Start/End: Original strand, 36409512 - 36409578
Alignment:
Q  249 cgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtc 316  Q
    ||||||||||||  ||| ||||||||||| |||||| ||| || |||||||| |||||||||||||||    
T  36409512 cgacaccgacacctataattacactaaattatgtgactttttc-aattattaatggtgtcggcgtgtc 36409578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 249 - 316
Target Start/End: Original strand, 36423678 - 36423744
Alignment:
Q  249 cgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtc 316  Q
    ||||||||||||  ||| ||||||||||| |||||| ||| || |||||||| |||||||||||||||    
T  36423678 cgacaccgacacctataattacactaaattatgtgactttttc-aattattaatggtgtcggcgtgtc 36423744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 250 - 300
Target Start/End: Original strand, 21720508 - 21720558
Alignment:
Q  250 gacaccgacacaaatagttacactaaatcatgtgattttatcaaattatta 300  Q
    |||||||||| | ||||||||| ||||| || |||||||||||||||||||    
T  21720508 gacaccgacatatatagttacattaaattatatgattttatcaaattatta 21720558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 249 - 335
Target Start/End: Original strand, 23292986 - 23293072
Alignment:
Q  249 cgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtcaatgtttgtgtcgtttccg 335  Q
    ||||||||||||   || ||| ||| ||| |||||||||| ||||||||||||  |||||||||||||| |||  ||||||| ||||    
T  23292986 cgacaccgacacttgtaattatactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcattgtccgtgtcgtgtccg 23293072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 216 - 306
Target Start/End: Original strand, 30982845 - 30982935
Alignment:
Q  216 ggtgtcggacgcgtgtcatgttcaacagcgacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtg 306  Q
    |||||||||| |||||| |||   ||| |||||||||||||||||  ||| ||||||| ||  |||||||||| |||||| ||||| ||||    
T  30982845 ggtgtcggacacgtgtcgtgtctgacaccgacacgacaccgacacttataattacactgaaatatgtgattttctcaaatcattagcggtg 30982935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 248 - 317
Target Start/End: Original strand, 35723383 - 35723453
Alignment:
Q  248 acgacaccgacacaaatagttacactaaatcatgtg-attttatcaaattattagtggtgtcggcgtgtca 317  Q
    ||||||| |||||| ||| ||||| | ||| ||||| ||||| |||||||||||| |||||||||||||||    
T  35723383 acgacactgacacatataattacattgaattatgtgtattttctcaaattattagcggtgtcggcgtgtca 35723453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 310
Target Start/End: Original strand, 8423718 - 8423779
Alignment:
Q  249 cgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcgg 310  Q
    |||||||||||   ||| ||||||| ||| |||||||||| |||||||||||| ||||||||    
T  8423718 cgacaccgacatttataattacactgaattatgtgattttctcaaattattagcggtgtcgg 8423779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 322
Target Start/End: Complemental strand, 17344555 - 17344486
Alignment:
Q  253 accgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtcaatgtt 322  Q
    ||||||||| ||| ||||| ||||| |||||||||| | |||| || ||||||||  |||||||||||||    
T  17344555 accgacacatataattacattaaattatgtgattttcttaaatgataagtggtgtgtgcgtgtcaatgtt 17344486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 350
Target Start/End: Complemental strand, 21945562 - 21945461
Alignment:
Q  249 cgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtcaatgtttgtgtcgtttccgatgcctgtgcttc 348  Q
    ||||||||||||   || ||||||| ||| |||| ||||| ||||||||||||  |||||||| ||||| ||| |||||| | |||| || | |||||||    
T  21945562 cgacaccgacacttgtaattacactgaattatgtcattttttcaaattattagctgtgtcggcatgtcagtgtctgtgtcatgtccggtgtccgtgcttc 21945463  T
Q  349 at 350  Q
    ||    
T  21945462 at 21945461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 301
Target Start/End: Complemental strand, 30838302 - 30838217
Alignment:
Q  216 ggtgtcggacgcgtgtcatgttcaacagcgacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattag 301  Q
    |||||||||| ||||||  || | |||  ||||||||||||| ||  ||| ||||||||||| || | ||||||||||||||||||    
T  30838302 ggtgtcggacacgtgtcgcgtccgacactgacacgacaccgatacttataattacactaaattatataattttatcaaattattag 30838217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 243 - 316
Target Start/End: Original strand, 35952611 - 35952684
Alignment:
Q  243 gcgacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtc 316  Q
    |||||||||||| || ||| ||| ||||| | ||| || ||||||||||||||||||||  ||| |||||||||    
T  35952611 gcgacacgacactgatacatataattacattgaattatatgattttatcaaattattagcagtggcggcgtgtc 35952684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 217 - 317
Target Start/End: Complemental strand, 904013 - 903913
Alignment:
Q  217 gtgtcggacgcgtgtcatgttcaacagcgacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtc 316  Q
    ||||||||| | |||| ||| ||||| ||| |||| || || ||| ||| ||||||| ||| |||||||||| |||||||||||  |||| ||| |||||    
T  904013 gtgtcggacacatgtcgtgtccaacaccgatacgatactgatacatataattacactgaattatgtgattttctcaaattattaacggtgccggtgtgtc 903914  T
Q  317 a 317  Q
    |    
T  903913 a 903913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 245 - 316
Target Start/End: Complemental strand, 4100027 - 4099953
Alignment:
Q  245 gacacgacaccgacacaaatagtta---cactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtc 316  Q
    ||||||||||||||||| ||| |||   |||||||| |||||||| | ||||||| ||| ||||||| |||||||    
T  4100027 gacacgacaccgacacatataattattacactaaattatgtgattgtctcaaatttttaatggtgtcagcgtgtc 4099953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 249 - 313
Target Start/End: Original strand, 4672085 - 4672149
Alignment:
Q  249 cgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgt 313  Q
    ||||||||||||| |||| |||||| ||| |||| |||||  |||||||||||  ||||||||||    
T  4672085 cgacaccgacacatatagctacactgaattatgtaattttcccaaattattagctgtgtcggcgt 4672149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 249 - 317
Target Start/End: Complemental strand, 15029824 - 15029756
Alignment:
Q  249 cgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtca 317  Q
    ||||||| ||||| ||| ||||||| ||| ||||||| || ||||||||||||  ||||| ||||||||    
T  15029824 cgacaccaacacatataattacactgaattatgtgatattttcaaattattagcagtgtctgcgtgtca 15029756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 216 - 288
Target Start/End: Complemental strand, 19312427 - 19312355
Alignment:
Q  216 ggtgtcggacgcgtgtcatgttcaacagcgacacgacaccgacacaaatagttacactaaatcatgtgatttt 288  Q
    |||||||||| |||||| | | | ||| |||||||||||||| ||  ||| ||||||| ||||||||||||||    
T  19312427 ggtgtcggacacgtgtcgtatccgacaacgacacgacaccgatacttataattacactgaatcatgtgatttt 19312355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 267 - 335
Target Start/End: Complemental strand, 40481677 - 40481610
Alignment:
Q  267 ttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtcaatgtttgtgtcgtttccg 335  Q
    ||||||| ||| |||||||||| ||||||||||||| || ||||||||||| |||  ||||||| ||||    
T  40481677 ttacactgaattatgtgatttt-tcaaattattagttgtatcggcgtgtcagtgtcagtgtcgtgtccg 40481610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 246 - 330
Target Start/End: Original strand, 21782817 - 21782899
Alignment:
Q  246 acacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtcaatgtttgtgtcgt 330  Q
    ||||||||||| ||||  || ||||||| ||| |||||||||| ||||||||||||  |||||||||||||| ||||||||||||    
T  21782817 acacgacaccggcaca--taattacactgaattatgtgattttctcaaattattagcagtgtcggcgtgtcagtgtttgtgtcgt 21782899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 249 - 317
Target Start/End: Complemental strand, 31018649 - 31018581
Alignment:
Q  249 cgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtca 317  Q
    ||||||||||||  ||| |||||||||||||||||||||| | |||||||||| ||||| |||||||||    
T  31018649 cgacaccgacacctataattacactaaatcatgtgattttctgaaattattagcggtgttggcgtgtca 31018581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 246 - 338
Target Start/End: Original strand, 36756341 - 36756433
Alignment:
Q  246 acacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtcaatgtttgtgtcgtttccgatg 338  Q
    |||||||||||||||  ||| ||||||| ||| |||| ||||  ||||||||||||| |||||| ||||||| ||| |||||||| |||||||    
T  36756341 acacgacaccgacacttataattacactgaattatgttatttcttcaaattattagttgtgtcgacgtgtcagtgtctgtgtcgtatccgatg 36756433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 244 - 330
Target Start/End: Original strand, 34784977 - 34785063
Alignment:
Q  244 cgacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtcaatgtttgtgtcgt 330  Q
    |||||||||||||||||| ||| ||||||||||| |||||||||| | |||  |||||| ||||||| |||||| |||  |||||||    
T  34784977 cgacacgacaccgacacatataattacactaaattatgtgattttctaaaaaaattagttgtgtcggtgtgtcagtgtccgtgtcgt 34785063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 218 - 308
Target Start/End: Complemental strand, 44860410 - 44860320
Alignment:
Q  218 tgtcggacgcgtgtcatgttcaacagcgacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtc 308  Q
    |||||||| | |||| ||| ||||| | |||||||||||||||| ||| ||||||| ||| ||| |||||| |||||||||||| ||||||    
T  44860410 tgtcggacacatgtcgtgtccaacaccaacacgacaccgacacatataattacactgaattatgcgattttctcaaattattagcggtgtc 44860320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 244 - 317
Target Start/End: Original strand, 12668418 - 12668491
Alignment:
Q  244 cgacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtca 317  Q
    |||||||||||||||||  ||| ||||||| ||| |||| ||||| |||||||||||||  |||||||||||||    
T  12668418 cgacacgacaccgacacttataattacactgaattatgtcattttttcaaattattagttatgtcggcgtgtca 12668491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 257 - 316
Target Start/End: Complemental strand, 21616813 - 21616754
Alignment:
Q  257 acacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtc 316  Q
    ||||| ||| ||||||| ||| |||||||||| |||||||||||| ||||||||||||||    
T  21616813 acacatataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtc 21616754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 234 - 307
Target Start/End: Original strand, 2665875 - 2665946
Alignment:
Q  234 tgttcaacagcgacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgt 307  Q
    ||||||||| |||||| |||||  |||| ||| ||||||||||| |||||||||| | ||||||||||||||||    
T  2665875 tgttcaacaccgacacaacacc--cacatataattacactaaattatgtgattttctaaaattattagtggtgt 2665946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 198 - 308
Target Start/End: Complemental strand, 4207966 - 4207857
Alignment:
Q  198 tcggattagacatgttcgggtgtcggacgcgtgtcatgttcaacagcgacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaatta 297  Q
    |||||||| || ||||  ||||||| || |||||| ||| | ||| |||||||| ||||||| | ||| ||||||||||| ||| | |||| ||||||||    
T  4207966 tcggattaaacgtgtttcggtgtcgaacacgtgtcgtgtccgacaccgacacgataccgaca-atataattacactaaattatgcgcttttttcaaatta 4207868  T
Q  298 ttagtggtgtc 308  Q
    |||||||||||    
T  4207867 ttagtggtgtc 4207857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 245 - 321
Target Start/End: Complemental strand, 2331855 - 2331781
Alignment:
Q  245 gacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtcaatgt 321  Q
    ||||||||||||||||| | |  |||||| ||| |||||||||| ||||||||||| ||||||  ||||||||||||    
T  2331855 gacacgacaccgacacataaa--tacactgaattatgtgattttctcaaattattaatggtgtttgcgtgtcaatgt 2331781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 250 - 311
Target Start/End: Complemental strand, 18276579 - 18276518
Alignment:
Q  250 gacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggc 311  Q
    |||||||||||| ||| ||||||| ||| | |||||||| |||||||||||| |||||||||    
T  18276579 gacaccgacacacataattacactgaattaagtgattttctcaaattattagcggtgtcggc 18276518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 252 - 317
Target Start/End: Complemental strand, 23718082 - 23718017
Alignment:
Q  252 caccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtca 317  Q
    |||||||||| ||| ||||||| ||| |||||| ||| |||||||||||| |||||||| ||||||    
T  23718082 caccgacacatataattacactgaattatgtgactttctcaaattattagcggtgtcggtgtgtca 23718017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 252 - 317
Target Start/End: Complemental strand, 24105754 - 24105689
Alignment:
Q  252 caccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtca 317  Q
    |||||||||| ||| ||||||| ||| |||||| ||| |||||||||||| |||||||| ||||||    
T  24105754 caccgacacatataattacactgaattatgtgactttctcaaattattagcggtgtcggtgtgtca 24105689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 243 - 300
Target Start/End: Original strand, 30527589 - 30527646
Alignment:
Q  243 gcgacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattatta 300  Q
    ||||||||| ||||||||| ||| ||||||||||| || ||||||| |||||||||||    
T  30527589 gcgacacgataccgacacatataattacactaaattatatgattttctcaaattatta 30527646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 317
Target Start/End: Original strand, 20242727 - 20242795
Alignment:
Q  249 cgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtca 317  Q
    ||||||||||||| ||| ||||||| ||| |||||||||| | |||  |||||| ||||||||||||||    
T  20242727 cgacaccgacacatataattacactgaattatgtgattttctaaaaaaattagttgtgtcggcgtgtca 20242795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 313
Target Start/End: Original strand, 27286244 - 27286356
Alignment:
Q  201 gattagacatgttcgggtgtcggacgcgtgtcatgttcaacagcgacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattatta 300  Q
    ||||||| |||| | ||||||||||  ||||| ||| | ||| ||||| ||||  |||||  ||| ||||||| ||| ||||||| ||||||||||||||    
T  27286244 gattagatatgtcccggtgtcggacatgtgtcgtgtccgacatcgacatgacattgacacctataattacacttaattatgtgatcttatcaaattatta 27286343  T
Q  301 gtggtgtcggcgt 313  Q
    | | |||||||||    
T  27286344 gcgttgtcggcgt 27286356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 313
Target Start/End: Complemental strand, 28677967 - 28677904
Alignment:
Q  249 cgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgt 313  Q
    ||||||||| ||| ||| ||||||| ||| |||||||||| |||||||||||| |||||||||||    
T  28677967 cgacaccga-acatataattacactgaattatgtgattttttcaaattattagcggtgtcggcgt 28677904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 301
Target Start/End: Original strand, 34691805 - 34691857
Alignment:
Q  249 cgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattag 301  Q
    ||||||||||||| ||| ||||||| ||| || ||||||||||||||||||||    
T  34691805 cgacaccgacacatataattacactgaattatatgattttatcaaattattag 34691857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 301
Target Start/End: Original strand, 34714217 - 34714269
Alignment:
Q  249 cgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattag 301  Q
    ||||||||||||| ||| ||||||| ||| || ||||||||||||||||||||    
T  34714217 cgacaccgacacatataattacactgaattatatgattttatcaaattattag 34714269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 317
Target Start/End: Original strand, 37411244 - 37411312
Alignment:
Q  249 cgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtca 317  Q
    ||||| ||||||| ||| | ||||| ||| |||||||||| |||||||||||| ||||||||| |||||    
T  37411244 cgacatcgacacatataatcacactgaattatgtgattttctcaaattattagcggtgtcggcatgtca 37411312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 249 - 335
Target Start/End: Original strand, 19536397 - 19536484
Alignment:
Q  249 cgacaccgacacaaatagttacactaaatcatgtgattttat-caaattattagtggtgtcggcgtgtcaatgtttgtgtcgtttccg 335  Q
    ||||||||||||   || ||||||| ||| |||||||||| | |||||||||||| |||||||||||||| |||  ||||||| ||||    
T  19536397 cgacaccgacacttgtaattacactgaattatgtgatttttttcaaattattagttgtgtcggcgtgtcattgtccgtgtcgtgtccg 19536484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 247 - 330
Target Start/End: Original strand, 20539672 - 20539755
Alignment:
Q  247 cacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtcaatgtttgtgtcgt 330  Q
    ||||||||||||||   || ||||||||||| || ||||||| ||||||||||||  |||||| ||||||| |||  |||||||    
T  20539672 cacgacaccgacacttgtaattacactaaattatatgattttttcaaattattagctgtgtcgacgtgtcagtgtccgtgtcgt 20539755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 267 - 306
Target Start/End: Complemental strand, 25846782 - 25846743
Alignment:
Q  267 ttacactaaatcatgtgattttatcaaattattagtggtg 306  Q
    ||||||| |||||||||||||| |||||||||||||||||    
T  25846782 ttacactgaatcatgtgattttctcaaattattagtggtg 25846743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 316
Target Start/End: Complemental strand, 26769602 - 26769503
Alignment:
Q  217 gtgtcggacgcgtgtcatgttcaacagcgacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtc 316  Q
    ||||||||| |||||| ||| | | | ||||| |||||||||||   || |||||| | || ||||||| || ||||||||||||| |||||||||||||    
T  26769602 gtgtcggacacgtgtcgtgtccgataccgacatgacaccgacacttgtaattacaccagataatgtgatattttcaaattattagttgtgtcggcgtgtc 26769503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 267 - 314
Target Start/End: Complemental strand, 30335458 - 30335411
Alignment:
Q  267 ttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtg 314  Q
    ||||||||||| |||| ||||| ||||||||||||| |||||||||||    
T  30335458 ttacactaaattatgtcattttttcaaattattagttgtgtcggcgtg 30335411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 249 - 303
Target Start/End: Complemental strand, 5367251 - 5367197
Alignment:
Q  249 cgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtg 303  Q
    ||||||||||||| ||| ||||||| ||| |||||||||  ||||||||||||||    
T  5367251 cgacaccgacacatataattacactgaattatgtgatttcctcaaattattagtg 5367197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 275 - 317
Target Start/End: Original strand, 12464875 - 12464917
Alignment:
Q  275 aatcatgtgattttatcaaattattagtggtgtcggcgtgtca 317  Q
    |||||||| ||||| ||||||||||| ||||||||||||||||    
T  12464875 aatcatgtcattttctcaaattattattggtgtcggcgtgtca 12464917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 250 - 311
Target Start/End: Original strand, 36409630 - 36409689
Alignment:
Q  250 gacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggc 311  Q
    ||||||||||||  || ||||||||||| |||||||||| ||||||||| || |||||||||    
T  36409630 gacaccgacaca--taattacactaaattatgtgattttttcaaattatcagcggtgtcggc 36409689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 338
Target Start/End: Complemental strand, 18422022 - 18421933
Alignment:
Q  249 cgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtcaatgtttgtgtcgtttccgatg 338  Q
    ||||||||||||   || ||||||| ||| ||||||| || | ||||||||| | |||||||||||||| |||  ||||||| |||||||    
T  18422022 cgacaccgacacttgtaattacactgaattatgtgatatttttaaattattaattgtgtcggcgtgtcagtgtccgtgtcgtatccgatg 18421933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 245 - 302
Target Start/End: Complemental strand, 18622669 - 18622612
Alignment:
Q  245 gacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagt 302  Q
    ||||||||||| ||||  ||| ||||||| ||| |||||||||||| |||||||||||    
T  18622669 gacacgacaccaacacgtataattacactgaattatgtgattttattaaattattagt 18622612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 245 - 309
Target Start/End: Original strand, 24975321 - 24975385
Alignment:
Q  245 gacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcg 309  Q
    |||||||||||||| || ||| ||||||| ||| ||  |||||| |||||||||||| |||||||    
T  24975321 gacacgacaccgacgcatatatttacactgaattatacgattttctcaaattattagcggtgtcg 24975385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 217 - 301
Target Start/End: Original strand, 30717498 - 30717582
Alignment:
Q  217 gtgtcggacgcgtgtcatgttcaacagcgacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattag 301  Q
    |||||| || |||||| ||| | ||| |||||||||| ||||||   || ||||||| ||| |||||||||| ||||||||||||    
T  30717498 gtgtcgaacacgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaattatgtgattttttcaaattattag 30717582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 35056959 - 35056903
Alignment:
Q  217 gtgtcggacgcgtgtcatgttcaacagcgacacgacaccgacacaaatagttacact 273  Q
    ||||||||| |||||| ||| | ||| |||||||||||||||||| ||| |||||||    
T  35056959 gtgtcggacacgtgtcgtgtccgacaccgacacgacaccgacacatataattacact 35056903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1528 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold1528
Description:

Target: scaffold1528; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 238 - 330
Target Start/End: Complemental strand, 1105 - 1013
Alignment:
Q  238 caacagcgacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtcaatgtttgtgtcgt 330  Q
    ||||| |||||| |||| |||||| ||||||||||| ||| |||| ||||| |||||||||||| |||||||| ||||||  || ||||||||    
T  1105 caacaccgacaccacactgacacatatagttacactgaattatgtaattttttcaaattattagcggtgtcggtgtgtcagcgtctgtgtcgt 1013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 246 - 316
Target Start/End: Original strand, 9744 - 9814
Alignment:
Q  246 acacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtc 316  Q
    |||||||||||||||| ||| ||||||| ||| | |||||||| ||||||||||||||| |||||| ||||    
T  9744 acacgacaccgacacatataattacactgaattaagtgattttctcaaattattagtggcgtcggcatgtc 9814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 244 - 335
Target Start/End: Complemental strand, 20236 - 20145
Alignment:
Q  244 cgacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtcaatgtttgtgtcgtttccg 335  Q
    ||||||||||| |||||   || ||||||| ||| |||||||||| ||||||||||||  |||||||||||||| |||  ||||||| ||||    
T  20236 cgacacgacactgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcattgtccgtgtcgtgtccg 20145  T

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Target: scaffold0053 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 249 - 335
Target Start/End: Complemental strand, 8857 - 8771
Alignment:
Q  249 cgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtcaatgtttgtgtcgtttccg 335  Q
    ||||||||||||   || ||||||||||| || ||||||| ||||||||||||  |||||||||||||| |||  ||||||| ||||    
T  8857 cgacaccgacacttgtaattacactaaataatatgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccg 8771  T

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Target: scaffold0039 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 218 - 316
Target Start/End: Original strand, 84942 - 85040
Alignment:
Q  218 tgtcggacgcgtgtcatgttcaacagcgacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtc 316  Q
    |||||||| |||||  ||||| ||| ||||| |||||||||| | ||| ||||||  ||| || ||||||| | |||||| ||||||||||||||||||    
T  84942 tgtcggacacgtgttgtgttcgacatcgacatgacaccgacatatataattacacataattatatgattttcttaaattagtagtggtgtcggcgtgtc 85040  T

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Target: scaffold0020 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 245 - 315
Target Start/End: Original strand, 135308 - 135378
Alignment:
Q  245 gacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgt 315  Q
    ||||||||||||||||| ||| ||||||  ||| |||||||||| ||||||||||||  ||||||| ||||    
T  135308 gacacgacaccgacacatataattacacagaattatgtgattttctcaaattattagcagtgtcggtgtgt 135378  T

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Target: scaffold0361 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 267 - 316
Target Start/End: Complemental strand, 14571 - 14522
Alignment:
Q  267 ttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtc 316  Q
    ||||||| ||| |||||||||| ||||||||||||| |||||||||||||    
T  14571 ttacactgaattatgtgattttttcaaattattagttgtgtcggcgtgtc 14522  T

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Target: scaffold0227 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 267 - 316
Target Start/End: Original strand, 7329 - 7378
Alignment:
Q  267 ttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtc 316  Q
    ||||||||||| ||||||||||  |||||||||||| |||||||||||||    
T  7329 ttacactaaattatgtgatttttccaaattattagttgtgtcggcgtgtc 7378  T

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Target: scaffold0085 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 279 - 328
Target Start/End: Complemental strand, 26422 - 26373
Alignment:
Q  279 atgtgattttatcaaattattagtggtgtcggcgtgtcaatgtttgtgtc 328  Q
    |||||||||| |||||||||||||||||||| ||||||| ||| ||||||    
T  26422 atgtgattttctcaaattattagtggtgtcgacgtgtcactgtctgtgtc 26373  T

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Target: scaffold0011 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 250 - 315
Target Start/End: Original strand, 17750 - 17815
Alignment:
Q  250 gacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgt 315  Q
    |||||||||||   || ||||||||||| |||||||||| ||||||||||||| ||||| ||||||    
T  17750 gacaccgacacttgtaattacactaaattatgtgattttttcaaattattagttgtgtcagcgtgt 17815  T

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Target: scaffold0306 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 270 - 317
Target Start/End: Complemental strand, 13438 - 13391
Alignment:
Q  270 cactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtca 317  Q
    |||| ||| |||||||||| ||||||||||||| ||||||||||||||    
T  13438 cactgaattatgtgattttctcaaattattagttgtgtcggcgtgtca 13391  T

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Target: scaffold0171 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 244 - 335
Target Start/End: Complemental strand, 23484 - 23393
Alignment:
Q  244 cgacacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtcaatgtttgtgtcgtttccg 335  Q
    |||||||||||||||||  ||| ||||||| ||| |||||||||| |  | ||||||   |||||||||||||| ||| |||||||| ||||    
T  23484 cgacacgacaccgacacttataattacactgaattatgtgatttttttgagttattatctgtgtcggcgtgtcagtgtctgtgtcgtgtccg 23393  T

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Target: scaffold0152 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 270 - 317
Target Start/End: Original strand, 21889 - 21936
Alignment:
Q  270 cactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtca 317  Q
    |||| ||| |||||||||| ||||||||||||| ||||||||||||||    
T  21889 cactgaattatgtgattttctcaaattattagttgtgtcggcgtgtca 21936  T

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Target: scaffold0027 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 267 - 338
Target Start/End: Complemental strand, 46723 - 46652
Alignment:
Q  267 ttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtcaatgtttgtgtcgtttccgatg 338  Q
    ||||||| ||| |||||||||| |||||||||||   |||||||||||||| |||  ||||||| |||||||    
T  46723 ttacactgaattatgtgattttttcaaattattaactgtgtcggcgtgtcattgtccgtgtcgtgtccgatg 46652  T

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Target: scaffold0236 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 246 - 300
Target Start/End: Original strand, 25765 - 25819
Alignment:
Q  246 acacgacaccgacacaaatagttacactaaatcatgtgattttatcaaattatta 300  Q
    |||||||||||||||  ||| ||||||||||| |||||||||| || ||||||||    
T  25765 acacgacaccgacacttataattacactaaattatgtgattttctctaattatta 25819  T

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Target: scaffold0103 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 267 - 317
Target Start/End: Complemental strand, 51852 - 51802
Alignment:
Q  267 ttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtca 317  Q
    ||||||| ||| |||||||||| ||||||||||||  ||||||||||||||    
T  51852 ttacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtca 51802  T

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Target: scaffold0019 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 198 - 317
Target Start/End: Complemental strand, 71835 - 71714
Alignment:
Q  198 tcggattagacatgttcgggtgtcggacgcgtgtcatgttcaacagcgacacgacaccgacacaaatagttacactaaatcatgtga--ttttatcaaat 295  Q
    ||||||||| | ||| | |||||||||| |||||  ||| | ||| ||||||||||| ||||| | || ||||||| |||  |||||  |||| ||||||    
T  71835 tcggattagtcgtgtcccggtgtcggacacgtgttgtgtccgacaccgacacgacactgacactagtaattacactgaattgtgtgattttttttcaaat 71736  T
Q  296 tattagtggtgtcggcgtgtca 317  Q
    ||||||  ||||||||||||||    
T  71735 tattagctgtgtcggcgtgtca 71714  T

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Target: scaffold0004 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 267 - 317
Target Start/End: Complemental strand, 92848 - 92798
Alignment:
Q  267 ttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtca 317  Q
    ||||||| ||| |||| ||||| |||||||||||| |||||||||||||||    
T  92848 ttacactgaattatgtaattttctcaaattattagcggtgtcggcgtgtca 92798  T

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Target: scaffold0018 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 282 - 335
Target Start/End: Original strand, 178852 - 178905
Alignment:
Q  282 tgattttatcaaattattagtggtgtcggcgtgtcaatgtttgtgtcgtttccg 335  Q
    ||||||| ||||||||||||| |||||||||||||| |||  ||||||| ||||    
T  178852 tgattttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtccg 178905  T

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Target: scaffold0246 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 267 - 335
Target Start/End: Complemental strand, 19616 - 19549
Alignment:
Q  267 ttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtcaatgtttgtgtcgtttccg 335  Q
    ||||||| ||| |||||||||| ||||||||||||| || ||||||||||| |||  ||||||| ||||    
T  19616 ttacactgaattatgtgatttt-tcaaattattagttgtatcggcgtgtcagtgtcagtgtcgtgtccg 19549  T

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Target: scaffold0022 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 250 - 330
Target Start/End: Complemental strand, 90901 - 90821
Alignment:
Q  250 gacaccgacacaaatagttacactaaatcatgtgattttatcaaattattagtggtgtcggcgtgtcaatgtttgtgtcgt 330  Q
    |||| ||||| | ||| ||||||| ||| || ||||||| ||||||||||| |||||| || |||||| ||| ||||||||    
T  90901 gacatcgacatatataattacactgaattatatgattttctcaaattattaatggtgttggtgtgtcagtgtctgtgtcgt 90821  T

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