View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11729_low_44 (Length: 258)
Name: NF11729_low_44
Description: NF11729
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11729_low_44 |
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Alignment Details
Target: chr3 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 3 - 143
Target Start/End: Original strand, 34574198 - 34574341
Alignment:
| Q |
3 |
ggacaaaatagaacgtggaatttgggtaagtgaaagctagtttgtcaccactctaagatatcatttttgtgactc---atatatcataatgatttacgtt |
99 |
Q |
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| T |
34574198 |
ggacaaaatagaacgtggaatttgggtaagtgaaagctagtttgtcattactctaagatatcatttttgtgactcataatatatcataatgatttacgtt |
34574297 |
T |
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| Q |
100 |
gtgactcaacttttgcttagaaaaagtttgttttcgtgtagctt |
143 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34574298 |
gtgactcaacttttgcttagaaaaagtttgttttcgtgtagctt |
34574341 |
T |
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