View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11729_low_6 (Length: 587)

Name: NF11729_low_6
Description: NF11729
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11729_low_6
NF11729_low_6
[»] chr7 (48 HSPs)
chr7 (76-571)||(33601669-33602166)
chr7 (123-558)||(33601060-33601500)
chr7 (123-274)||(17944282-17944434)
chr7 (124-277)||(27863661-27863815)
chr7 (123-277)||(48470023-48470178)
chr7 (123-277)||(19302499-19302650)
chr7 (126-277)||(420342-420494)
chr7 (153-277)||(11619094-11619218)
chr7 (123-233)||(30570911-30571022)
chr7 (123-233)||(39967899-39968010)
chr7 (123-274)||(19022524-19022676)
chr7 (126-277)||(34744010-34744162)
chr7 (157-248)||(38499878-38499969)
chr7 (153-254)||(21568454-21568555)
chr7 (157-277)||(36517593-36517711)
chr7 (185-277)||(5947283-5947375)
chr7 (123-217)||(48507701-48507797)
chr7 (123-201)||(46280284-46280363)
chr7 (153-227)||(39629943-39630017)
chr7 (122-266)||(45593505-45593651)
chr7 (144-272)||(19214347-19214476)
chr7 (171-270)||(3927953-3928052)
chr7 (123-277)||(20526425-20526580)
chr7 (123-218)||(45338428-45338523)
chr7 (419-492)||(7244665-7244739)
chr7 (123-272)||(33678759-33678909)
chr7 (163-224)||(20428494-20428555)
chr7 (157-233)||(5947198-5947274)
chr7 (153-233)||(28614443-28614523)
chr7 (157-277)||(34035931-34036051)
chr7 (122-259)||(3308205-3308344)
chr7 (127-217)||(38138475-38138566)
chr7 (123-277)||(39907782-39907935)
chr7 (125-182)||(4970824-4970882)
chr7 (141-218)||(28341052-28341129)
chr7 (171-227)||(28900903-28900960)
chr7 (192-277)||(34464157-34464242)
chr7 (123-231)||(39279941-39280050)
chr7 (157-261)||(44989629-44989734)
chr7 (153-271)||(45790372-45790485)
chr7 (386-441)||(991700-991756)
chr7 (419-455)||(2176872-2176908)
chr7 (123-182)||(7467588-7467648)
chr7 (122-165)||(20234461-20234505)
chr7 (153-277)||(21196279-21196402)
chr7 (210-277)||(25670522-25670590)
chr7 (156-232)||(43250681-43250756)
chr7 (123-182)||(43694601-43694661)
[»] chr8 (37 HSPs)
chr8 (123-276)||(26771244-26771398)
chr8 (122-271)||(38648329-38648479)
chr8 (123-274)||(18133635-18133787)
chr8 (123-277)||(10758193-10758347)
chr8 (123-277)||(27028810-27028965)
chr8 (153-277)||(12976223-12976346)
chr8 (123-277)||(35534549-35534702)
chr8 (128-277)||(30251390-30251540)
chr8 (157-277)||(31716163-31716283)
chr8 (170-273)||(35643928-35644031)
chr8 (155-274)||(43045664-43045783)
chr8 (163-277)||(1058013-1058126)
chr8 (122-233)||(25930533-25930646)
chr8 (157-278)||(35749505-35749626)
chr8 (176-233)||(8146362-8146419)
chr8 (192-273)||(28763417-28763498)
chr8 (123-278)||(42043290-42043436)
chr8 (125-260)||(6881908-6882044)
chr8 (193-277)||(36963290-36963374)
chr8 (157-272)||(1930049-1930164)
chr8 (170-233)||(10120783-10120846)
chr8 (123-277)||(15180520-15180673)
chr8 (123-233)||(16825518-16825628)
chr8 (125-255)||(29168015-29168146)
chr8 (123-233)||(29205787-29205897)
chr8 (198-277)||(41589641-41589720)
chr8 (419-492)||(20672735-20672809)
chr8 (123-233)||(37945576-37945686)
chr8 (199-277)||(40859719-40859796)
chr8 (157-277)||(43717870-43717993)
chr8 (185-277)||(32840922-32841014)
chr8 (153-231)||(16347200-16347279)
chr8 (243-277)||(9130255-9130289)
chr8 (144-233)||(9956794-9956884)
chr8 (126-233)||(10114471-10114579)
chr8 (185-233)||(10383927-10383974)
chr8 (131-182)||(11861791-11861843)
[»] chr4 (45 HSPs)
chr4 (123-277)||(17822801-17822956)
chr4 (128-277)||(21731592-21731742)
chr4 (153-277)||(54426053-54426177)
chr4 (123-267)||(50681035-50681180)
chr4 (153-261)||(30668320-30668426)
chr4 (134-271)||(50662680-50662818)
chr4 (153-277)||(26801-26924)
chr4 (159-274)||(13126515-13126630)
chr4 (131-277)||(22030190-22030337)
chr4 (123-273)||(53294054-53294205)
chr4 (152-233)||(29657393-29657474)
chr4 (157-274)||(55302263-55302380)
chr4 (159-271)||(24169279-24169391)
chr4 (128-271)||(2244032-2244179)
chr4 (156-277)||(25904159-25904280)
chr4 (131-227)||(55414406-55414503)
chr4 (125-230)||(7839344-7839450)
chr4 (153-277)||(39603107-39603230)
chr4 (127-277)||(35571567-35571718)
chr4 (405-501)||(30668012-30668099)
chr4 (131-233)||(46588053-46588157)
chr4 (185-274)||(49939890-49939979)
chr4 (190-277)||(15173239-15173326)
chr4 (129-203)||(16199991-16200066)
chr4 (123-259)||(25332753-25332891)
chr4 (208-277)||(437100-437169)
chr4 (126-222)||(41512633-41512730)
chr4 (153-218)||(46592204-46592269)
chr4 (157-277)||(1706636-1706756)
chr4 (170-230)||(21523585-21523644)
chr4 (185-233)||(41336802-41336850)
chr4 (210-277)||(52172791-52172859)
chr4 (125-231)||(2996554-2996660)
chr4 (296-351)||(30668248-30668303)
chr4 (157-226)||(1407970-1408040)
chr4 (437-486)||(18011874-18011924)
chr4 (123-233)||(37863935-37864043)
chr4 (163-233)||(55064855-55064925)
chr4 (123-227)||(54069403-54069508)
chr4 (436-492)||(55547055-55547112)
chr4 (123-182)||(15177233-15177293)
chr4 (169-233)||(20109611-20109675)
chr4 (173-277)||(23459658-23459761)
chr4 (185-233)||(43886112-43886159)
chr4 (185-233)||(56249566-56249613)
[»] chr5 (45 HSPs)
chr5 (123-277)||(16937819-16937974)
chr5 (123-257)||(16457935-16458070)
chr5 (122-277)||(10639931-10640087)
chr5 (123-277)||(39105443-39105599)
chr5 (131-277)||(43300865-43301012)
chr5 (157-277)||(9202684-9202804)
chr5 (123-273)||(29925820-29925970)
chr5 (124-277)||(40426745-40426899)
chr5 (192-277)||(31038333-31038418)
chr5 (192-277)||(31047557-31047642)
chr5 (157-277)||(7705934-7706054)
chr5 (157-277)||(7984983-7985103)
chr5 (153-277)||(12857274-12857398)
chr5 (153-233)||(12857685-12857765)
chr5 (156-272)||(42500184-42500298)
chr5 (126-258)||(32009674-32009808)
chr5 (169-233)||(3735138-3735202)
chr5 (158-277)||(35445780-35445898)
chr5 (157-270)||(19460330-19460442)
chr5 (153-230)||(37954696-37954773)
chr5 (157-277)||(15246847-15246967)
chr5 (142-233)||(1465000-1465091)
chr5 (127-221)||(25461074-25461169)
chr5 (144-277)||(11700163-11700296)
chr5 (123-233)||(2568636-2568747)
chr5 (153-277)||(9107100-9107224)
chr5 (241-277)||(22209760-22209796)
chr5 (170-233)||(34669709-34669773)
chr5 (170-226)||(35446082-35446138)
chr5 (185-276)||(36797032-36797124)
chr5 (198-277)||(3520632-3520711)
chr5 (170-277)||(3932612-3932719)
chr5 (157-211)||(4014426-4014480)
chr5 (425-492)||(12521518-12521587)
chr5 (153-227)||(39477893-39477967)
chr5 (200-233)||(2973524-2973557)
chr5 (157-232)||(3280696-3280771)
chr5 (198-277)||(6096602-6096681)
chr5 (144-208)||(13697764-13697828)
chr5 (158-274)||(29845375-29845489)
chr5 (170-230)||(32859703-32859762)
chr5 (170-230)||(32861875-32861934)
chr5 (199-275)||(32942650-32942726)
chr5 (189-277)||(41419365-41419453)
chr5 (161-233)||(42646685-42646757)
[»] chr3 (45 HSPs)
chr3 (131-277)||(18405767-18405914)
chr3 (123-277)||(39980708-39980863)
chr3 (123-277)||(20880455-20880610)
chr3 (123-277)||(30443872-30444027)
chr3 (122-270)||(53789406-53789553)
chr3 (153-277)||(24085274-24085398)
chr3 (123-277)||(584025-584180)
chr3 (123-277)||(21367646-21367801)
chr3 (190-277)||(31365124-31365211)
chr3 (123-233)||(36631031-36631142)
chr3 (157-277)||(3845499-3845618)
chr3 (157-277)||(46031004-46031124)
chr3 (123-229)||(402526-402633)
chr3 (153-236)||(901934-902017)
chr3 (123-277)||(46778127-46778281)
chr3 (157-277)||(34610742-34610862)
chr3 (123-233)||(20170502-20170613)
chr3 (123-271)||(20257514-20257664)
chr3 (143-275)||(22203429-22203561)
chr3 (123-277)||(31365245-31365391)
chr3 (123-215)||(35959454-35959547)
chr3 (185-276)||(49556900-49556997)
chr3 (141-221)||(46478684-46478767)
chr3 (123-277)||(13715508-13715665)
chr3 (203-270)||(34034158-34034225)
chr3 (122-203)||(47132309-47132391)
chr3 (125-233)||(37689212-37689319)
chr3 (424-492)||(46407905-46407974)
chr3 (123-226)||(4401026-4401127)
chr3 (157-277)||(39602147-39602266)
chr3 (123-190)||(44061046-44061114)
chr3 (157-233)||(45541585-45541660)
chr3 (210-277)||(24684758-24684825)
chr3 (156-227)||(28795839-28795910)
chr3 (156-271)||(37389196-37389311)
chr3 (123-277)||(46886628-46886783)
chr3 (190-277)||(51929293-51929380)
chr3 (157-275)||(466207-466325)
chr3 (171-277)||(9832691-9832797)
chr3 (123-180)||(30956659-30956717)
chr3 (123-180)||(30972471-30972529)
chr3 (157-195)||(33883768-33883806)
chr3 (172-236)||(944591-944655)
chr3 (185-229)||(26911627-26911671)
chr3 (222-277)||(47132397-47132450)
[»] chr2 (56 HSPs)
chr2 (123-277)||(41851514-41851669)
chr2 (123-277)||(15757594-15757750)
chr2 (125-274)||(43279466-43279616)
chr2 (123-277)||(45229491-45229645)
chr2 (123-274)||(18066107-18066259)
chr2 (141-277)||(26202025-26202162)
chr2 (131-277)||(20952342-20952489)
chr2 (123-277)||(39659445-39659600)
chr2 (161-235)||(33981140-33981214)
chr2 (123-233)||(41812072-41812181)
chr2 (173-277)||(449877-449981)
chr2 (123-274)||(32592566-32592717)
chr2 (123-277)||(1625879-1626034)
chr2 (123-277)||(41241069-41241223)
chr2 (152-277)||(750679-750804)
chr2 (123-270)||(12464416-12464564)
chr2 (185-277)||(19608569-19608661)
chr2 (157-265)||(41293111-41293219)
chr2 (153-260)||(7035520-7035627)
chr2 (126-230)||(5745768-5745873)
chr2 (137-277)||(9174808-9174949)
chr2 (123-277)||(33319752-33319903)
chr2 (157-277)||(4606939-4607059)
chr2 (169-277)||(13325596-13325704)
chr2 (213-277)||(27317449-27317513)
chr2 (198-274)||(30331806-30331882)
chr2 (154-277)||(10619156-10619279)
chr2 (210-277)||(42659147-42659214)
chr2 (163-277)||(31561678-31561792)
chr2 (203-277)||(42419853-42419927)
chr2 (161-277)||(7928234-7928351)
chr2 (156-217)||(20926516-20926577)
chr2 (123-231)||(40279176-40279285)
chr2 (160-277)||(43036574-43036690)
chr2 (131-277)||(2142640-2142788)
chr2 (170-277)||(15305701-15305808)
chr2 (158-233)||(16451133-16451208)
chr2 (123-233)||(26626852-26626963)
chr2 (150-233)||(33192209-33192291)
chr2 (171-225)||(2227194-2227248)
chr2 (437-486)||(3067396-3067446)
chr2 (157-271)||(42457962-42458076)
chr2 (175-233)||(43570446-43570503)
chr2 (156-233)||(1647249-1647325)
chr2 (122-225)||(12289774-12289879)
chr2 (158-271)||(23974435-23974547)
chr2 (157-277)||(26143578-26143696)
chr2 (156-277)||(36534781-36534902)
chr2 (192-277)||(38916245-38916330)
chr2 (409-488)||(3227698-3227778)
chr2 (209-277)||(7033238-7033306)
chr2 (469-501)||(7103484-7103516)
chr2 (163-235)||(36043924-36043996)
chr2 (123-218)||(39073684-39073780)
chr2 (123-233)||(41407280-41407392)
chr2 (437-492)||(42817387-42817443)
[»] chr1 (57 HSPs)
chr1 (153-277)||(2295106-2295230)
chr1 (131-263)||(49938734-49938867)
chr1 (123-277)||(3233951-3234106)
chr1 (123-273)||(13809977-13810128)
chr1 (123-277)||(14576590-14576744)
chr1 (153-277)||(29904761-29904885)
chr1 (156-233)||(15477578-15477655)
chr1 (123-258)||(17603339-17603475)
chr1 (123-230)||(24915034-24915142)
chr1 (124-236)||(37631536-37631649)
chr1 (123-277)||(6556950-6557106)
chr1 (122-264)||(27970243-27970387)
chr1 (123-265)||(27976574-27976725)
chr1 (123-233)||(30286499-30286611)
chr1 (123-277)||(473143-473297)
chr1 (126-274)||(2777874-2778022)
chr1 (141-277)||(43230708-43230843)
chr1 (124-221)||(51688685-51688782)
chr1 (153-277)||(5720935-5721059)
chr1 (125-228)||(51929524-51929628)
chr1 (158-233)||(37473418-37473493)
chr1 (190-277)||(42575405-42575492)
chr1 (153-277)||(5741616-5741740)
chr1 (123-277)||(41195132-41195284)
chr1 (130-221)||(42174841-42174933)
chr1 (128-260)||(36872716-36872845)
chr1 (190-277)||(37517102-37517189)
chr1 (186-277)||(38001639-38001729)
chr1 (123-233)||(41184630-41184741)
chr1 (156-254)||(27820156-27820253)
chr1 (163-273)||(38018304-38018414)
chr1 (153-277)||(27146191-27146315)
chr1 (124-220)||(27820330-27820427)
chr1 (160-233)||(38503445-38503518)
chr1 (131-233)||(40977383-40977487)
chr1 (123-208)||(47432075-47432160)
chr1 (126-277)||(1432497-1432649)
chr1 (157-233)||(7136979-7137054)
chr1 (131-274)||(14331970-14332112)
chr1 (225-277)||(14385729-14385781)
chr1 (156-263)||(33186318-33186426)
chr1 (142-233)||(37842336-37842427)
chr1 (213-277)||(38247397-38247461)
chr1 (441-492)||(11893604-11893655)
chr1 (198-277)||(37617401-37617480)
chr1 (125-179)||(39596578-39596633)
chr1 (199-274)||(52863290-52863365)
chr1 (126-195)||(49888749-49888819)
chr1 (177-230)||(36872299-36872352)
chr1 (153-233)||(3887612-3887692)
chr1 (178-274)||(7119877-7119972)
chr1 (157-233)||(10199389-10199464)
chr1 (157-233)||(10744315-10744390)
chr1 (225-277)||(33204330-33204382)
chr1 (158-277)||(38116013-38116133)
chr1 (157-229)||(45975704-45975776)
chr1 (157-233)||(51695475-51695551)
[»] chr6 (27 HSPs)
chr6 (157-273)||(31813175-31813291)
chr6 (125-227)||(34430447-34430550)
chr6 (157-227)||(9763574-9763644)
chr6 (126-267)||(20368127-20368268)
chr6 (135-272)||(24982696-24982834)
chr6 (176-277)||(848022-848122)
chr6 (123-231)||(9093538-9093647)
chr6 (205-277)||(4163215-4163287)
chr6 (205-277)||(4224836-4224908)
chr6 (123-233)||(2735048-2735159)
chr6 (126-208)||(6536597-6536680)
chr6 (123-193)||(6909892-6909963)
chr6 (170-273)||(9912131-9912234)
chr6 (123-278)||(24626274-24626422)
chr6 (202-277)||(30926578-30926653)
chr6 (155-233)||(35070630-35070708)
chr6 (126-259)||(35099019-35099152)
chr6 (388-447)||(9027508-9027568)
chr6 (198-278)||(9559357-9559437)
chr6 (123-230)||(18076175-18076290)
chr6 (210-274)||(30536570-30536634)
chr6 (161-233)||(31624108-31624179)
chr6 (185-271)||(19411491-19411577)
chr6 (123-195)||(837234-837307)
chr6 (419-455)||(31672538-31672575)
chr6 (143-277)||(13907584-13907717)
chr6 (210-277)||(33089572-33089640)
[»] scaffold0221 (1 HSPs)
scaffold0221 (157-274)||(22245-22362)
[»] scaffold0528 (1 HSPs)
scaffold0528 (192-277)||(918-1003)
[»] scaffold0050 (1 HSPs)
scaffold0050 (157-257)||(58756-58856)
[»] scaffold0057 (1 HSPs)
scaffold0057 (210-277)||(24688-24755)


Alignment Details
Target: chr7 (Bit Score: 462; Significance: 0; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 462; E-Value: 0
Query Start/End: Original strand, 76 - 571
Target Start/End: Complemental strand, 33602166 - 33601669
Alignment:
Q  76 gatctggaaaatcaacgtaacag--caatttcgttatagnnnnnnngtattaaattgtttttgtatttgctataagtggttttataagctatcttagaga 173  Q
    |||||||||||||||||||||||  ||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33602166 gatctggaaaatcaacgtaacagagcaatttcgttatagtttttttgtattaaattgtttttgtatttgctataagtggttttataagctatcttagaga 33602067  T
Q  174 acttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttttcgaaaagagtctcataaaacttatgccagtagataagc 273  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33602066 acttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttttcgaaaagagtctcataaaacttatgccagtagataagc 33601967  T
Q  274 tcaatctaatccaaacaggctttagtttctttaagcattgtaattgtacctttggattaaaattctaattgcatagccatacatagattaattaaatgct 373  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33601966 tcaatctaatccaaacaggctttagtttctttaagcattgtaattgtacctttggattaaaattctaattgcatagccatacatagattaattaaatgct 33601867  T
Q  374 tagtagcttacaacataagtgcttatcatgagttatttctacactaaaaaataaaataaagtcaaactgttttataagctattgtgaagactttatgaaa 473  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33601866 tagtagcttacaacataagtgcttatcatgagttatttctacactaaaaaataaaataaagtcaaactgttttataagctattgtgaagactttatgaaa 33601767  T
Q  474 ataagctaaaaacaacttagggatatgttgcaagttgtttcatgtcagaatttatatctataaatttttccagagcttcaatattgtttgatgtttat 571  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33601766 ataagctaaaaacaacttaaggatatgttgcaagttgtttcatgtcagaatttatatctataaatttttccagagcttcaatattgtttgatgtttat 33601669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 320; E-Value: 1e-180
Query Start/End: Original strand, 123 - 558
Target Start/End: Complemental strand, 33601500 - 33601060
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgt 222  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  33601500 ttaaattatttttgtatttgctataagttgttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgt 33601401  T
Q  223 tttcataagttttcgaaaagagtctcataaaacttatgccagtagataagctcaa----tctaatccaaacaggctttagtttctttaagcattgtaatt 318  Q
    ||||||||||| ||||||||||||||| ||||||||||||| |||||||||||||    || | ||||||| ||||||||||||||||||||| ||||||    
T  33601400 tttcataagttctcgaaaagagtctcacaaaacttatgccaatagataagctcaaataatcaattccaaaccggctttagtttctttaagcatagtaatt 33601301  T
Q  319 gtacctttggattaaaattctaattgcatagccatacatagattaattaaatgcttagtagcttacaacataagtgcttatcatgagttatttctacact 418  Q
    ||||||||||||| |||||||||||| ||||||| ||||||||||||||||  ||  ||||||| || ||||||||||||||||||||||||||||||||    
T  33601300 gtacctttggattgaaattctaattgaatagccaaacatagattaattaaacactcggtagcttgcagcataagtgcttatcatgagttatttctacact 33601201  T
Q  419 aaaaaataaaataaagtcaaactgtttt-ataagctattgtgaagactttatgaaaataagctaaaaacaacttagggatatgttgcaagttgtttcatg 517  Q
    |||||||||||||||||||||||||||| |||||||||||  |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33601200 aaaaaataaaataaagtcaaactgttttcataagctattgcaaagagtttatgaaaataagctaaaaacaacttagggatatgttgcaagttgtttcatg 33601101  T
Q  518 tcagaatttatatctataaatttttccagagcttcaatatt 558  Q
    |||||||||||||||||||||||||||| ||||| ||||||    
T  33601100 tcagaatttatatctataaatttttccaaagctttaatatt 33601060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 123 - 274
Target Start/End: Complemental strand, 17944434 - 17944282
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 221  Q
    ||||||||||||||||| || | ||||| ||||| ||||| |||||| || || ||||||| ||||||||||||| || |||||||||||||||||||||    
T  17944434 ttaaattgtttttgtatatgttgtaagttgttttcataagttatcttggataatttatgaaattaagctgaaaaaagcatatgaaaagtgtcataagctg 17944335  T
Q  222 ttttcataagttttcgaaaagagtctcataaaacttatgccagtagataagct 274  Q
    |||| ||||||| ||  ||| ||||||| ||| ||||||||||||||||||||    
T  17944334 tttttataagttgtctgaaacagtctcacaaagcttatgccagtagataagct 17944282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 124 - 277
Target Start/End: Complemental strand, 27863815 - 27863661
Alignment:
Q  124 taaattgtttttgtatttgctataagtggtttta-taagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgt 222  Q
    |||||| | ||||||| |||||||||| |||||| ||| |||| ||||||||||||||||  |||||||||||| | || |||||| | ||  |||||||    
T  27863815 taaattttatttgtatatgctataagttgttttaataaactatattagagaacttatgaacataagctgaaaaaagtttttgaaaattttctcaagctgt 27863716  T
Q  223 tttcataagttttcgaaaagagtctcataaaacttatgccagtagataagctcaa 277  Q
    ||||||||||| ||  ||| ||||||| ||||||||||||||| |||||||||||    
T  27863715 tttcataagttctctcaaatagtctcacaaaacttatgccagtggataagctcaa 27863661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 123 - 277
Target Start/End: Original strand, 48470023 - 48470178
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 221  Q
    ||||||||||||||||| |  ||||||| ||||| ||||||||| ||  | ||||||||||  |||||| ||||| ||||||||||| || |||||||||    
T  48470023 ttaaattgtttttgtatataatataagttgttttcataagctattttgaataacttatgaacataagctcaaaaaagcttatgaaaaatgccataagctg 48470122  T
Q  222 ttttcataagttttcgaaaagagtctcataaaacttatgccagtagataagctcaa 277  Q
    |||||||||||| ||  ||| | |||||||||||||||| |  |||||||||||||    
T  48470123 ttttcataagttctcccaaacaatctcataaaacttatgtctatagataagctcaa 48470178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 123 - 277
Target Start/End: Complemental strand, 19302650 - 19302499
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 221  Q
    ||||||||||||||||| || ||||||| ||||| |||||||||     ||||||||||||  |||| ||||||| | ||||||||| ||||||||||||    
T  19302650 ttaaattgtttttgtatatgttataagttgtttttataagctata----agaacttatgaaaataagttgaaaaaagtttatgaaaattgtcataagctg 19302555  T
Q  222 ttttcataagttttcgaaaagagtctcataaaacttatgccagtagataagctcaa 277  Q
    ||||||||| || ||  ||| | ||||| |||||||||| ||||||||||||||||    
T  19302554 ttttcataaattctcccaaatattctcacaaaacttatgtcagtagataagctcaa 19302499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 126 - 277
Target Start/End: Original strand, 420342 - 420494
Alignment:
Q  126 aattgtttttgtatttgctataagtggtttta-taagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttt 224  Q
    |||||||||||||| |||||||||| ||||   |||||||| || |||||||||||||  |||| ||||||||||||  ||||| ||||||||  |||||    
T  420342 aattgtttttgtatatgctataagttgtttccgtaagctatattggagaacttatgaaaataagttgaaaaaggctttagaaaactgtcataaattgttt 420441  T
Q  225 tcataagttttcgaaaagagtctcataaaacttatgccagtagataagctcaa 277  Q
    ||||||||| ||  ||| ||||||| ||| |||| ||||||||| ||||||||    
T  420442 tcataagttctcccaaacagtctcacaaagcttaagccagtagacaagctcaa 420494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 153 - 277
Target Start/End: Complemental strand, 11619218 - 11619094
Alignment:
Q  153 ttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttttcgaaaagagtctcataa 252  Q
    ||||||||||||  || ||||||||||||| ||||| ||||||| ||||||||||| ||||||||| ||||||||||| || ||  ||   || |||| |    
T  11619218 ttttataagctacgttggagaacttatgaaattaagttgaaaaaagcttatgaaaattgtcataagttgttttcataaattctcccaatctgtttcatga 11619119  T
Q  253 aacttatgccagtagataagctcaa 277  Q
    | |||||| ||||||||||||||||    
T  11619118 agcttatgtcagtagataagctcaa 11619094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 123 - 233
Target Start/End: Complemental strand, 30571022 - 30570911
Alignment:
Q  123 ttaaattgtttttgtatttgctataag-tggttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 221  Q
    ||||||| ||||||||| ||||||||| |  |||||||| |||  || ||||||||||||| ||||  ||||||| ||||||||||| ||||||||||||    
T  30571022 ttaaattatttttgtatatgctataagctatttttataacctacattggagaacttatgaaattaacatgaaaaaagcttatgaaaattgtcataagctg 30570923  T
Q  222 ttttcataagtt 233  Q
    |||||| |||||    
T  30570922 ttttcacaagtt 30570911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 123 - 233
Target Start/End: Original strand, 39967899 - 39968010
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 221  Q
    |||||||||||| ||| | ||||||||| ||||| ||||||||||| |||||||| |||||  |||| ||||||  ||||||||| | || |||||||||    
T  39967899 ttaaattgttttcgtactagctataagttgttttcataagctatctgagagaactaatgaaaataagttgaaaacagcttatgaacaatgccataagctg 39967998  T
Q  222 ttttcataagtt 233  Q
    ||||||||||||    
T  39967999 ttttcataagtt 39968010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 123 - 274
Target Start/End: Complemental strand, 19022676 - 19022524
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 221  Q
    ||||||||||||  ||  |||||||||| ||||| ||||||||| || |||||||||||||  |||| |||| |   |||||||||| ||||||||| ||    
T  19022676 ttaaattgttttaataaatgctataagttgtttttataagctatattggagaacttatgaaaataagttgaagacaacttatgaaaattgtcataagttg 19022577  T
Q  222 ttttcataagttttcgaaaagagtctcataaaacttatgccagtagataagct 274  Q
    ||||||||| || ||  ||| | ||||| |||||| ||| |||||||||||||    
T  19022576 ttttcataaattctcccaaacaatctcacaaaactcatgtcagtagataagct 19022524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 126 - 277
Target Start/End: Original strand, 34744010 - 34744162
Alignment:
Q  126 aattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttt 224  Q
    |||||||||||||| || ||||||| ||||| ||||||||| || |||||||||| ||  ||||  |||||| |||| |||||| ||||||||| | |||    
T  34744010 aattgtttttgtatatggtataagttgttttcataagctatattggagaacttataaaaataaggcgaaaaaagcttgtgaaaattgtcataagttcttt 34744109  T
Q  225 tcataagttttcgaaaagagtctcataaaacttatgccagtagataagctcaa 277  Q
    |||| |||| |   ||| ||||||| ||| ||||||  |||||||||||||||    
T  34744110 tcattagttcttccaaacagtctcacaaatcttatgttagtagataagctcaa 34744162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 157 - 248
Target Start/End: Complemental strand, 38499969 - 38499878
Alignment:
Q  157 ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttttcgaaaagagtctc 248  Q
    |||||| ||||| |||||||||||||  ||||||| |||| ||||||||||| |||||||||||||||| | ||||| ||  ||||||||||    
T  38499969 ataagcaatcttggagaacttatgaaaataagctggaaaaagcttatgaaaaatgtcataagctgttttgaaaagttctcccaaagagtctc 38499878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 153 - 254
Target Start/End: Complemental strand, 21568555 - 21568454
Alignment:
Q  153 ttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttttcgaaaagagtctcataa 252  Q
    ||||||||||||| || ||||||||||| |  |||| ||||||  ||||||||||| ||| |||||||||||||||||||| ||  ||| ||||||| ||    
T  21568555 ttttataagctatattggagaacttatggaactaagttgaaaagagcttatgaaaattgttataagctgttttcataagttctcccaaacagtctcacaa 21568456  T
Q  253 aa 254  Q
    ||    
T  21568455 aa 21568454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 157 - 277
Target Start/End: Original strand, 36517593 - 36517711
Alignment:
Q  157 ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttttcgaaaagagtctcataaaact 256  Q
    |||||||||||| ||||| |||||||  ||| |||||||  ||||||||| | |||||  ||||||||| ||||||| ||  ||| ||||| | ||||||    
T  36517593 ataagctatcttggagaaattatgaaaataaactgaaaatagcttatgaacaatgtca--agctgttttaataagttctcccaaacagtcttagaaaact 36517690  T
Q  257 tatgccagtagataagctcaa 277  Q
    ||||||||||| |||||||||    
T  36517691 tatgccagtagctaagctcaa 36517711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 185 - 277
Target Start/End: Original strand, 5947283 - 5947375
Alignment:
Q  185 taagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttttcgaaaagagtctcataaaacttatgccagtagataagctcaa 277  Q
    ||||||| |||| || |||||||| |||||||||||| ||||| ||||| |   ||| ||||||||||||||||| ||| |||||||||||||    
T  5947283 taagctgtaaaaagcatatgaaaaatgtcataagctggtttcaaaagttcttccaaacagtctcataaaacttataccaatagataagctcaa 5947375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 123 - 217
Target Start/End: Original strand, 48507701 - 48507797
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggtttt-ataagctatc-ttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataa 217  Q
    ||||||||||||||||| ||||||||   ||||| |||||| ||| |||||||||||||||| |||||||||||||  ||||| |||| ||||||||    
T  48507701 ttaaattgtttttgtatatgctataaactgttttcataagccatccttagagaacttatgaaattaagctgaaaaatacttataaaaaatgtcataa 48507797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 123 - 201
Target Start/End: Complemental strand, 46280363 - 46280284
Alignment:
Q  123 ttaaattgtttttgtatttgctataag-tggttttataagctatcttagagaacttatgaatttaagctgaaaaaggctt 201  Q
    ||||||||||||||||| ||||||||| || ||||||||||||| || |||||||||||||  || ||||||||| ||||    
T  46280363 ttaaattgtttttgtatatgctataagctgtttttataagctatattggagaacttatgaaaataggctgaaaaaagctt 46280284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 153 - 227
Target Start/End: Complemental strand, 39630017 - 39629943
Alignment:
Q  153 ttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttca 227  Q
    |||| |||||||| ||  ||||||||||| | |||| ||||||| ||||||||||| ||||||||||||||||||    
T  39630017 ttttttaagctatattgaagaacttatgactataagttgaaaaaagcttatgaaaattgtcataagctgttttca 39629943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 122 - 266
Target Start/End: Original strand, 45593505 - 45593651
Alignment:
Q  122 attaaattgtttttgtatttgctataag-tggttttataagctatcttagagaacttatgaatttaagctg-aaaaaggcttatgaaaagtgtcataagc 219  Q
    |||||||  ||||||||| ||||||||| |  |||| ||||||||||| ||||||||| |||  ||| ||| ||||| ||||||||||| |||||| ||     
T  45593505 attaaatattttttgtatatgctataagctatttttctaagctatcttggagaacttacgaaaataaactggaaaaaagcttatgaaaaatgtcatcaga 45593604  T
Q  220 tgttttcataagttttcgaaaagagtctcataaaacttatgccagta 266  Q
    |||||| ||||||| ||  ||| ||||||| ||| |||||| |||||    
T  45593605 tgtttttataagttctcccaaacagtctcacaaagcttatgtcagta 45593651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 144 - 272
Target Start/End: Complemental strand, 19214476 - 19214347
Alignment:
Q  144 tataagtggttt-tataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttttcgaaaag 242  Q
    ||||||| |||| |||||||||| ||  ||||||||||||  |||| ||||| | | ||||||||| ||||||  |||||||||||||||| ||  |||     
T  19214476 tataagttgtttgtataagctatattgtagaacttatgaaaataagttgaaacaagtttatgaaaattgtcatttgctgttttcataagttctcccaaac 19214377  T
Q  243 agtctcataaaacttatgccagtagataag 272  Q
    | ||||| |||||||||||  |||||||||    
T  19214376 aatctcacaaaacttatgcatgtagataag 19214347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 171 - 270
Target Start/End: Complemental strand, 3928052 - 3927953
Alignment:
Q  171 agaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttttcgaaaagagtctcataaaacttatgccagtagata 270  Q
    ||||||||||||  |||| ||||||| ||||||||||| ||||||||  |||||| | || || ||  ||| ||||||| ||||||||||| ||||||||    
T  3928052 agaacttatgaaaataagttgaaaaaagcttatgaaaattgtcataaattgttttaaaaaattctctcaaatagtctcacaaaacttatgctagtagata 3927953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 123 - 277
Target Start/End: Original strand, 20526425 - 20526580
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 221  Q
    ||||||| | ||||||  |||||||||  ||||| ||||||||| || ||||||| |||||  |||||| ||||  ||||| ||||| ||| |||| |||    
T  20526425 ttaaattatgtttgtacatgctataagctgttttcataagctattttggagaactaatgaaaataagctaaaaacagcttacgaaaaatgtgataaactg 20526524  T
Q  222 ttttcataagttttcgaaaagagtctcataaaacttatgccagtagataagctcaa 277  Q
    |||||||||||| ||  ||| ||||||| |||| || | ||| ||||||| |||||    
T  20526525 ttttcataagttctctcaaacagtctcacaaaatttctaccaatagataaactcaa 20526580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 123 - 218
Target Start/End: Original strand, 45338428 - 45338523
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataag 218  Q
    ||||||||||||||||| |||| ||||| ||||| |||||||| || ||||||| |||||  |||| |||||||  || || |||| |||||||||    
T  45338428 ttaaattgtttttgtatatgctgtaagttgttttttaagctatattggagaactgatgaaaataagttgaaaaaaactaataaaaattgtcataag 45338523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 419 - 492
Target Start/End: Original strand, 7244665 - 7244739
Alignment:
Q  419 aaaaaataaaataaagtcaaactgtttt-ataagctattgtgaagactttatgaaaataagctaaaaacaactta 492  Q
    |||| |||||| |||||||||||||||| |||||||||  || |||  ||||||||||||||| |||||||||||    
T  7244665 aaaagataaaagaaagtcaaactgttttcataagctatattggagagcttatgaaaataagctgaaaacaactta 7244739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 123 - 272
Target Start/End: Original strand, 33678759 - 33678909
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 221  Q
    |||||| |||||||||   ||||||||  ||||| |||||||||||| || ||||| ||||  |||| ||||||   || ||||| | ||| ||||| ||    
T  33678759 ttaaatggtttttgtaaaagctataagctgttttcataagctatcttggaaaacttgtgaaaataagttgaaaacatctcatgaacaatgttataagttg 33678858  T
Q  222 ttttcataagttttcgaaaagagtctcataaaacttatgccagtagataag 272  Q
    |||||||||||| ||  |||  |||||| ||||||||||| ||||||||||    
T  33678859 ttttcataagttctcccaaattgtctcacaaaacttatgcaagtagataag 33678909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 163 - 224
Target Start/End: Original strand, 20428494 - 20428555
Alignment:
Q  163 tatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttt 224  Q
    |||||||| ||||||| |||  |||||||||||| |||||||| || |||||||||||||||    
T  20428494 tatcttagggaacttacgaaaataagctgaaaaaagcttatgagaactgtcataagctgttt 20428555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 157 - 233
Target Start/End: Original strand, 5947198 - 5947274
Alignment:
Q  157 ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagtt 233  Q
    |||||||||||  ||||| |||||||  |||||||||||  ||||||||||| || ||||||||| ||||| |||||    
T  5947198 ataagctatctaggagaagttatgaaaataagctgaaaagagcttatgaaaaatgccataagctggtttcaaaagtt 5947274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 233
Target Start/End: Original strand, 28614443 - 28614523
Alignment:
Q  153 ttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagtt 233  Q
    ||||| ||||| | || ||||||||||||| |||| |||||||| |||| |||||| ||| ||| | ||||||||||||||    
T  28614443 ttttaaaagctgtattggagaacttatgaaattaaactgaaaaaagcttgtgaaaattgttatatgttgttttcataagtt 28614523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 157 - 277
Target Start/End: Original strand, 34035931 - 34036051
Alignment:
Q  157 ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttttcgaaaagagtctcataaaact 256  Q
    |||||||||||||||||||||  |||  |||| ||||||   |||||||| | ||||||||| | |||||||||||| |   ||  ||||||| || ||     
T  34035931 ataagctatcttagagaacttgcgaaaataagttgaaaacaacttatgaacaatgtcataagttattttcataagttcttccaagtagtctcacaataca 34036030  T
Q  257 tatgccagtagataagctcaa 277  Q
    |||| ||||||||||||||||    
T  34036031 tatgtcagtagataagctcaa 34036051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 122 - 259
Target Start/End: Complemental strand, 3308344 - 3308205
Alignment:
Q  122 attaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatga-aaagtgtcataagc 219  Q
    |||||||||||| | ||| |||||||||   |||| | ||| ||| || |||||||||| ||  |||||||||||| |||||||| ||| || |||||||    
T  3308344 attaaattgtttatttatatgctataagatattttcagaagttatgtttgagaacttattaaaataagctgaaaaaagcttatgagaaaatggcataagc 3308245  T
Q  220 tgttttcataagttttcgaaaagagtctcataaaacttat 259  Q
    | |||||| ||||| ||  ||| |||| ||||||||||||    
T  3308244 tattttcaaaagttctcccaaacagtcacataaaacttat 3308205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 127 - 217
Target Start/End: Complemental strand, 38138566 - 38138475
Alignment:
Q  127 attgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataa 217  Q
    |||| |||||||| |||||||||| ||||| || |||||| ||   |||||||||||  |||| ||||||| ||||||||||| ||||||||    
T  38138566 attgattttgtatatgctataagttgtttttattagctatattgacgaacttatgaaaataagttgaaaaaagcttatgaaaattgtcataa 38138475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 123 - 277
Target Start/End: Original strand, 39907782 - 39907935
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 221  Q
    |||||||||||||||||  |||||||   ||||| |||| ||||||||||||||| |||||  |||||||||||  ||| ||||| | || ||||||||     
T  39907782 ttaaattgtttttgtataagctataaactgttttcataaactatcttagagaactaatgaaaataagctgaaaacagctaatgaaca-tg-cataagctc 39907879  T
Q  222 ttttcataagttttcgaaaagagtctcataaaacttatgccagtagataagctcaa 277  Q
     ||| | ||||| ||  ||| ||||||| ||||||||| || ||| ||||||||||    
T  39907880 attttacaagttctctcaaacagtctcacaaaacttatccctgtatataagctcaa 39907935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 125 - 182
Target Start/End: Complemental strand, 4970882 - 4970824
Alignment:
Q  125 aaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaa 182  Q
    ||||||||||||||| ||||||||||  |||| ||||| ||| ||||||||||||||||    
T  4970882 aaattgtttttgtatatgctataagttctttttataagatatattagagaacttatgaa 4970824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 141 - 218
Target Start/End: Complemental strand, 28341129 - 28341052
Alignment:
Q  141 tgctataagtggttt-tataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataag 218  Q
    |||||||||| |||| ||||| |||| ||||||||||||||||  ||||||| |||| |||| |||||| |||||||||    
T  28341129 tgctataagttgtttgtataaactatattagagaacttatgaa-ataagctggaaaaagcttttgaaaattgtcataag 28341052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 171 - 227
Target Start/End: Original strand, 28900903 - 28900960
Alignment:
Q  171 agaacttatgaatttaagctgaaaaaggcttatga-aaagtgtcataagctgttttca 227  Q
    ||||||||||||  ||||||||||||| |||| || ||| ||||||||||||||||||    
T  28900903 agaacttatgaaaataagctgaaaaagccttacgagaaaatgtcataagctgttttca 28900960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 192 - 277
Target Start/End: Complemental strand, 34464242 - 34464157
Alignment:
Q  192 aaaaaggcttatgaaaagtgtcataagctgttttcataagttttcgaaaagagtctcataaaacttatgccagtagataagctcaa 277  Q
    ||||| |||| |||||| |||||||||||||||||||||||  ||  ||| |||||  ||||| ||||| || ||||||| |||||    
T  34464242 aaaaaagcttgtgaaaattgtcataagctgttttcataagtcctcccaaaaagtcttgtaaaatttatgtcaatagataaactcaa 34464157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 123 - 231
Target Start/End: Original strand, 39279941 - 39280050
Alignment:
Q  123 ttaaattgtttttgtatttgctataag-tggttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 221  Q
    ||||||||||| ||||| || |||| | || ||| ||||  |||||| |||||||| ||||  |||||||||||| ||||||| ||| ||  ||||||||    
T  39279941 ttaaattgtttgtgtatatgttataggctgatttcataaattatcttggagaacttttgaaaataagctgaaaaaagcttatgtaaaatgctataagctg 39280040  T
Q  222 ttttcataag 231  Q
    |||| |||||    
T  39280041 tttttataag 39280050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 157 - 261
Target Start/End: Complemental strand, 44989734 - 44989629
Alignment:
Q  157 ataagctatcttagagaacttatgaatttaagctgaaaaag-gcttatgaaaagtgtcataagctgttttcataagttttcgaaaagagtctcataaaac 255  Q
    ||||| ||||||  |||| |||||||  ||||||| ||||  |||| |||| | ||||| ||| |||||||||||||||||  ||| ||||||| |||||    
T  44989734 ataagatatcttgtagaaattatgaaaataagctgcaaaacagcttgtgaacaatgtcagaagttgttttcataagttttcccaaacagtctcacaaaac 44989635  T
Q  256 ttatgc 261  Q
    ||||||    
T  44989634 ttatgc 44989629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 271
Target Start/End: Complemental strand, 45790485 - 45790372
Alignment:
Q  153 ttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttttcgaaaagagtctcataa 252  Q
    |||||||| |||| || || ||||||||||  |||||||||||| |||| | |||| ||||||||| | |||||||||||| ||  |||    |||||||    
T  45790485 ttttataaactatattggataacttatgaaaataagctgaaaaa-gcttttaaaaattgtcataagttattttcataagttctccgaaa----ctcataa 45790391  T
Q  253 aacttatgccagtagataa 271  Q
    |||||||| || |||||||    
T  45790390 aacttatgtcaatagataa 45790372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 386 - 441
Target Start/End: Original strand, 991700 - 991756
Alignment:
Q  386 acataagtgcttat-catgagttatttctacactaaaaaataaaataaagtcaaact 441  Q
    |||||||||||||| ||| ||||||||||  ||||||| ||||||||||| ||||||    
T  991700 acataagtgcttatgcataagttatttctctactaaaatataaaataaagacaaact 991756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 419 - 455
Target Start/End: Original strand, 2176872 - 2176908
Alignment:
Q  419 aaaaaataaaataaagtcaaactgttttataagctat 455  Q
    |||| ||||||||||||||||||| ||||||||||||    
T  2176872 aaaagataaaataaagtcaaactgctttataagctat 2176908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 182
Target Start/End: Original strand, 7467588 - 7467648
Alignment:
Q  123 ttaaattgttttt-gtatttgctataagtggttttataagctatcttagagaacttatgaa 182  Q
    ||||||||||||| |||| ||||||||||| ||| | ||| |||||||| |||||||||||    
T  7467588 ttaaattgttttttgtatatgctataagtgatttcagaagttatcttagtgaacttatgaa 7467648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 122 - 165
Target Start/End: Original strand, 20234461 - 20234505
Alignment:
Q  122 attaaattgtttttgtatttgctataagtggtttta-taagctat 165  Q
    ||||||||||||||||| ||||||||||| |||||| ||||||||    
T  20234461 attaaattgtttttgtaattgctataagttgttttactaagctat 20234505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 153 - 277
Target Start/End: Original strand, 21196279 - 21196402
Alignment:
Q  153 ttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttttcgaaaagagtctcataa 252  Q
    ||||||||||| | ||  |||||||| |||  |||| | ||||| || |||||||| ||||||| ||||||| ||||| || |   ||| ||||||| ||    
T  21196279 ttttataagctttattgcagaacttaagaaaataagttaaaaaaagcatatgaaaattgtcata-gctgtttgcataaattcttctaaacagtctcacaa 21196377  T
Q  253 aacttatgccagtagataagctcaa 277  Q
    ||||||||| |||| ||||||||||    
T  21196378 aacttatgctagtatataagctcaa 21196402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 210 - 277
Target Start/End: Complemental strand, 25670590 - 25670522
Alignment:
Q  210 tgtcataagctgttttcataagttttcgaaaagagtctcataa-aacttatgccagtagataagctcaa 277  Q
    ||||||||| |||||||||||||||||  ||| ||||||| || | |||||| || |||||||||||||    
T  25670590 tgtcataagttgttttcataagttttctcaaacagtctcacaagagcttatgtcaatagataagctcaa 25670522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 156 - 232
Target Start/End: Complemental strand, 43250756 - 43250681
Alignment:
Q  156 tataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagt 232  Q
    |||||||||| || |||| ||||||||| ||| |||||||   |||| ||| | |||||||||||||||||||||||    
T  43250756 tataagctattttggagagcttatgaatataaactgaaaacaacttacgaaca-tgtcataagctgttttcataagt 43250681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 182
Target Start/End: Complemental strand, 43694661 - 43694601
Alignment:
Q  123 ttaaattgtttttgtatttgctataag-tggttttataagctatcttagagaacttatgaa 182  Q
    ||||||||||||||||| ||||||||| || ||||||||||||| |   ||||||||||||    
T  43694661 ttaaattgtttttgtatatgctataagctgtttttataagctatatcgaagaacttatgaa 43694601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 83; Significance: 5e-39; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 123 - 276
Target Start/End: Original strand, 26771244 - 26771398
Alignment:
Q  123 ttaaattgtttttgtatttgctataag-tggttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 221  Q
    ||||||||||||||||| ||||||||| |  ||||||||| ||| ||||||||||||||||  |||| |||||||||||| |||||| ||||||||||||    
T  26771244 ttaaattgtttttgtatatgctataagctttttttataagatatattagagaacttatgaaaataagttgaaaaaggcttttgaaaattgtcataagctg 26771343  T
Q  222 ttttcataagttttcgaaaagagtctcataaaacttatgccagtagataagctca 276  Q
    |||||||||||| ||  ||| ||||||| |||||||||||| |||||||||||||    
T  26771344 ttttcataagttctcccaaacagtctcacaaaacttatgcccgtagataagctca 26771398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 122 - 271
Target Start/End: Original strand, 38648329 - 38648479
Alignment:
Q  122 attaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagct 220  Q
    ||||| |||||||||||| || ||| ||| ||||| ||||||||||||  |||||||||||| ||| ||| ||||| |||||||| || |||||| ||||    
T  38648329 attaacttgtttttgtatatgttatgagttgttttcataagctatcttgtagaacttatgaaattacgcttaaaaaagcttatgagaactgtcatgagct 38648428  T
Q  221 gttttcataagttttcgaaaagagtctcataaaacttatgccagtagataa 271  Q
    ||||||||||| | ||  ||| ||||||| |||||||||| ||||||||||    
T  38648429 gttttcataaggtctcccaaacagtctcacaaaacttatgtcagtagataa 38648479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 123 - 274
Target Start/End: Original strand, 18133635 - 18133787
Alignment:
Q  123 ttaaattgtttttgtatttgctataag-tggttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 221  Q
    |||||||| |||||||| | ||||||| ||||||||||| |||| || |||||||||||||  |||||||||||| |||| |||||| ||| ||||||||    
T  18133635 ttaaattgcttttgtatatcctataagctggttttataaactatattggagaacttatgaaaataagctgaaaaaagcttgtgaaaattgttataagctg 18133734  T
Q  222 ttttcataagttttcgaaaagagtctcataaaacttatgccagtagataagct 274  Q
     ||||| ||| | ||  ||| ||||||| ||||||||| | ||||||||||||    
T  18133735 atttcacaagctctcccaaacagtctcacaaaacttatactagtagataagct 18133787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 123 - 277
Target Start/End: Complemental strand, 10758347 - 10758193
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggt-tttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 221  Q
    ||||||||||||||||| |||||||||| || |||||||||||| ||||  ||||||||||   ||||||||||| |||| |||||| ||||||||||||    
T  10758347 ttaaattgtttttgtatatgctataagttgtctttataagctatattagc-aacttatgaaaacaagctgaaaaaagcttttgaaaattgtcataagctg 10758249  T
Q  222 ttttcataagttttcgaaaagagtctcataaaacttatgccagtagataagctcaa 277  Q
    ||||||||| || |   ||| ||||||| ||||||||||  || ||||||| ||||    
T  10758248 ttttcataaattctatcaaacagtctcacaaaacttatgttagcagataagttcaa 10758193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 123 - 277
Target Start/End: Original strand, 27028810 - 27028965
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 221  Q
    ||||||||||| ||||| |||||||||  ||||| |||||||||||| |||| ||||||||  |||||||||||  ||||||||||| |||| |||||||    
T  27028810 ttaaattgtttgtgtatatgctataagctgttttcataagctatcttggagagcttatgaaaataagctgaaaatagcttatgaaaaatgtcctaagctg 27028909  T
Q  222 ttttcataagttttcgaaaagagtctcataaaacttatgccagtagataagctcaa 277  Q
    |||||| || || ||  ||| | |||||  |||||||||||||| ||||| |||||    
T  27028910 ttttcagaatttctcccaaacaatctcactaaacttatgccagtggataaactcaa 27028965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 153 - 277
Target Start/End: Original strand, 12976223 - 12976346
Alignment:
Q  153 ttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttttcgaaaagagtctcataa 252  Q
    ||||||||||||| |||||||||||||||| | ||||||||||| |||| |||||| ||| | |||||||| ||||||||| |   ||| ||||||| ||    
T  12976223 ttttataagctatattagagaacttatgaaat-aagctgaaaaaagcttttgaaaattgttagaagctgttctcataagttctactaaacagtctcacaa 12976321  T
Q  253 aacttatgccagtagataagctcaa 277  Q
    | ||||||| |||||||||||||||    
T  12976322 accttatgctagtagataagctcaa 12976346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 123 - 277
Target Start/End: Complemental strand, 35534702 - 35534549
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 221  Q
    ||||||||||||||||| |  |||| || ||||| ||||| ||| || |||||||||||||  ||||| |||||| |||| | |||| ||||||||||||    
T  35534702 ttaaattgtttttgtatgt--tatatgttgttttcataagttatattggagaacttatgaaagtaagccgaaaaaagcttgttaaaattgtcataagctg 35534605  T
Q  222 ttttcataagttttcgaaaagagtctcataaaacttatgccagtagataagctcaa 277  Q
    |||||| ||||| ||  ||| ||||||| ||||||||||  |||||||||||||||    
T  35534604 ttttcacaagttctctcaaacagtctcacaaaacttatgttagtagataagctcaa 35534549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 128 - 277
Target Start/End: Complemental strand, 30251540 - 30251390
Alignment:
Q  128 ttgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttc 226  Q
    ||||| |||||| || ||||||  ||||| |||||||||||| ||  |||||||||  ||||||| |||| ||||||||||| ||  |||||||||||||    
T  30251540 ttgttattgtatatgttataagctgttttcataagctatcttggaccacttatgaaaataagctgtaaaaagcttatgaaaaatgcaataagctgttttc 30251441  T
Q  227 ataagttttcgaaaagagtctcataaaacttatgccagtagataagctcaa 277  Q
     |||||| ||  ||| |||||||  ||||||||| ||||||||||||||||    
T  30251440 gtaagttctcccaaacagtctcacgaaacttatgtcagtagataagctcaa 30251390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 157 - 277
Target Start/End: Complemental strand, 31716283 - 31716163
Alignment:
Q  157 ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttttcgaaaagagtctcataaaact 256  Q
    |||||||||||| ||||| ||||  |  |||||||||||| ||||||||| | |||||||||||||||||| ||||| ||  ||| ||||||| ||||      
T  31716283 ataagctatcttggagaagttatagaaataagctgaaaaaagcttatgaagaatgtcataagctgttttcaaaagttctccgaaacagtctcaaaaaaaa 31716184  T
Q  257 tatgccagtagataagctcaa 277  Q
    ||||||| |||||||||||||    
T  31716183 tatgccaatagataagctcaa 31716163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 170 - 273
Target Start/End: Complemental strand, 35644031 - 35643928
Alignment:
Q  170 gagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttttcgaaaagagtctcataaaacttatgccagtagat 269  Q
    |||| ||||||||  |||| ||||||| ||||||||||| |||||||| || |||||||||||| ||  ||| ||||||| |||| ||||||||||||||    
T  35644031 gagagcttatgaaaataagttgaaaaaagcttatgaaaattgtcataaactattttcataagttatcccaaacagtctcacaaaaattatgccagtagat 35643932  T
Q  270 aagc 273  Q
    ||||    
T  35643931 aagc 35643928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 155 - 274
Target Start/End: Complemental strand, 43045783 - 43045664
Alignment:
Q  155 ttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttttcgaaaagagtctcataaaa 254  Q
    |||||| |||| || |||||||||||||  |||| ||||||| |||||| |||| |||  ||||||||||||||||| | || |||| ||||||| |||     
T  43045783 ttataaactatattggagaacttatgaaaataagttgaaaaaagcttattaaaattgttgtaagctgttttcataagatctccaaaacagtctcacaaat 43045684  T
Q  255 cttatgccagtagataagct 274  Q
    ||||||| ||||||||||||    
T  43045683 cttatgctagtagataagct 43045664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 163 - 277
Target Start/End: Complemental strand, 1058126 - 1058013
Alignment:
Q  163 tatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttttcgaaaagagtctcataaaacttatgcc 262  Q
    |||||| |||||||||||||  ||||| ||||||  || ||||||| |||||||||| ||||||| ||||| ||  ||| ||||||| ||||||||||      
T  1058126 tatcttggagaacttatgaaaataagcggaaaaaa-ctaatgaaaaatgtcataagcagttttcaaaagttctcccaaacagtctcacaaaacttatgta 1058028  T
Q  263 agtagataagctcaa 277  Q
    |||||||||||||||    
T  1058027 agtagataagctcaa 1058013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 122 - 233
Target Start/End: Complemental strand, 25930646 - 25930533
Alignment:
Q  122 attaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtca-taagc 219  Q
    |||||| ||||||||||| |||| ||| | ||||| |||||||||||| |||||||| |||   |||||||||||| ||||| ||||||||||| ||||     
T  25930646 attaaaatgtttttgtatatgctttaaattgttttcataagctatcttggagaacttgtgatagtaagctgaaaaaagcttacgaaaagtgtcattaaga 25930547  T
Q  220 tgttttcataagtt 233  Q
    | ||||||||||||    
T  25930546 ttttttcataagtt 25930533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 157 - 278
Target Start/End: Complemental strand, 35749626 - 35749505
Alignment:
Q  157 ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttttcgaaaagagtctcataaaact 256  Q
    ||||||||||||| ||||||||||||  || | ||||||| | ||||||||| ||  | |||||||||||||||||| ||  ||| || |||  ||||||    
T  35749626 ataagctatcttaaagaacttatgaaaatatgttgaaaaaagtttatgaaaaatgctacaagctgttttcataagttctctcaaacagcctcgcaaaact 35749527  T
Q  257 tatgccagtagataagctcaat 278  Q
    |||| || ||||||||||||||    
T  35749526 tatgtcaatagataagctcaat 35749505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 176 - 233
Target Start/End: Original strand, 8146362 - 8146419
Alignment:
Q  176 ttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagtt 233  Q
    ||||||| |||||||| ||||  ||||||||||||||||||| |||||||||||||||    
T  8146362 ttatgaaattaagctggaaaaaacttatgaaaagtgtcataaactgttttcataagtt 8146419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 192 - 273
Target Start/End: Original strand, 28763417 - 28763498
Alignment:
Q  192 aaaaaggcttatgaaaagtgtcataagctgttttcataagttttcgaaaagagtctcataaaacttatgccagtagataagc 273  Q
    ||||| ||||||||||| ||| |||||||||||||||||||| ||  ||| ||||||| ||||||||||  | |||||||||    
T  28763417 aaaaaagcttatgaaaattgttataagctgttttcataagttctcccaaacagtctcacaaaacttatgttactagataagc 28763498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 123 - 278
Target Start/End: Complemental strand, 42043436 - 42043290
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 221  Q
    |||||||||||||| || || ||||||| ||||| |||||||||||||||||||| ||||   ||||||          |||||||| | ||||||||||    
T  42043436 ttaaattgtttttggatatgatataagttgttttcataagctatcttagagaactaatgacaataagct----------tatgaaaaatatcataagctg 42043347  T
Q  222 ttttcataagttttcgaaaagagtctcataaaacttatgccagtagataagctcaat 278  Q
    ||| |||| ||| ||   || |||||||||||||||||| ||||| |||||||||||    
T  42043346 tttccatatgttctcccgaacagtctcataaaacttatgacagtaaataagctcaat 42043290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 125 - 260
Target Start/End: Original strand, 6881908 - 6882044
Alignment:
Q  125 aaattgtttttgtatttgctataagtggttttataagctatcttagagaacttatgaatttaagc-tgaaaaaggcttatgaaaagtgtcataagctgtt 223  Q
    ||||||||||| ||| |||||||||  |||||||||||||  || |||||||||||||  |||||   ||||| |||| | |||| | |||| |||||||    
T  6881908 aaattgtttttatatatgctataagctgttttataagctaaattggagaacttatgaaaataagcaaaaaaaaagcttgttaaaattatcatgagctgtt 6882007  T
Q  224 ttcataagttttcgaaaagagtctcataaaacttatg 260  Q
    |||||| ||| ||  ||| ||||||| ||||||||||    
T  6882008 ttcataggttctcccaaacagtctcacaaaacttatg 6882044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 193 - 277
Target Start/End: Complemental strand, 36963374 - 36963290
Alignment:
Q  193 aaaaggcttatgaaaagtgtcataagctgttttcataagttttcgaaaagagtctcataaaacttatgccagtagataagctcaa 277  Q
    |||| |||| |||||| ||||| ||||||||||  |||||| ||  ||| ||||||| ||||||||||||||||||| |||||||    
T  36963374 aaaaagcttttgaaaattgtcaaaagctgtttttgtaagttctcccaaacagtctcacaaaacttatgccagtagattagctcaa 36963290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 157 - 272
Target Start/End: Original strand, 1930049 - 1930164
Alignment:
Q  157 ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttttcgaaaagagtctcataaaact 256  Q
    |||||||||||| | || ||| ||||  |||||||||||  ||||||||| | |||||||| ||||||||| ||||| ||  ||| | | ||| ||||||    
T  1930049 ataagctatcttggtgaccttgtgaaaataagctgaaaacagcttatgaacaatgtcataaactgttttcacaagttctcccaaataatgtcacaaaact 1930148  T
Q  257 tatgccagtagataag 272  Q
    |||| |||||||||||    
T  1930149 tatgtcagtagataag 1930164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 170 - 233
Target Start/End: Original strand, 10120783 - 10120846
Alignment:
Q  170 gagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagtt 233  Q
    |||||||||||||  |||||||||||  || ||||| || ||||||||||||||||||||||||    
T  10120783 gagaacttatgaaaataagctgaaaacagcatatgataaatgtcataagctgttttcataagtt 10120846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 123 - 277
Target Start/End: Original strand, 15180520 - 15180673
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggttt-tataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 221  Q
    ||||||| ||||||||  || ||||||| |||| |||||||||| || |||||||| ||||  |||| | |||||  |||  ||||| ||||| || |||    
T  15180520 ttaaattatttttgtaaatgttataagttgtttctataagctatattggagaacttctgaaaataagtttaaaaaaacttg-gaaaattgtcaaaacctg 15180618  T
Q  222 ttttcataagttttcgaaaagagtctcataaaacttatgccagtagataagctcaa 277  Q
    |||||| || || || |||| |||||||||||||||||| |||||||||| |||||    
T  15180619 ttttcagaaattctccaaaa-agtctcataaaacttatggcagtagataaactcaa 15180673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 123 - 233
Target Start/End: Complemental strand, 16825628 - 16825518
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggttt-tataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 221  Q
    ||||||||||||||| |  | ||||||| |||| || ||||||| ||   |||||||||||  |||| |||||||| |||||||||| |||||||||||     
T  16825628 ttaaattgtttttgtttacgttataagttgtttctacaagctatattgccgaacttatgaaaataagttgaaaaag-cttatgaaaattgtcataagcta 16825530  T
Q  222 ttttcataagtt 233  Q
    ||||||||||||    
T  16825529 ttttcataagtt 16825518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 125 - 255
Target Start/End: Complemental strand, 29168146 - 29168015
Alignment:
Q  125 aaattgtttttgtatttgctataagtggtttta-taagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgtt 223  Q
    ||||| ||||||||| |||||||||  |||||  | ||||||||| ||||||||||| |  |||||||| |||   ||||||||| |||||||| |||||    
T  29168146 aaattatttttgtatatgctataagctgttttcctgagctatcttggagaacttatggaaataagctgagaaacatttatgaaaaatgtcataatctgtt 29168047  T
Q  224 ttcataagttttcgaaaagagtctcataaaac 255  Q
    || ||||||| ||  ||| ||||||| |||||    
T  29168046 tttataagttctcccaaacagtctcacaaaac 29168015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 123 - 233
Target Start/End: Original strand, 29205787 - 29205897
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 221  Q
    ||||||||||||||||| ||||||||||  |||| |||| |||| || ||||| |||||||  || | | |||||| |||||||||| ||||||| ||||    
T  29205787 ttaaattgtttttgtatatgctataagttattttcataaactattttggagaatttatgaaagtaggttaaaaaag-cttatgaaaaatgtcatacgctg 29205885  T
Q  222 ttttcataagtt 233  Q
    |||| |||||||    
T  29205886 ttttaataagtt 29205897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 198 - 277
Target Start/End: Original strand, 41589641 - 41589720
Alignment:
Q  198 gcttatgaaaagtgtcataagctgttttcataagttttcgaaaagagtctcataaaacttatgccagtagataagctcaa 277  Q
    |||| |||||| ||| ||||| |||||||||||||| || |||| ||||||| ||| |||||| ||||||| ||||||||    
T  41589641 gcttttgaaaattgttataagttgttttcataagttctccaaaacagtctcaaaaagcttatgtcagtagacaagctcaa 41589720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 419 - 492
Target Start/End: Original strand, 20672735 - 20672809
Alignment:
Q  419 aaaaaataaaataaagtcaaactg-ttttataagctattgtgaagactttatgaaaataagctaaaaacaactta 492  Q
    |||| ||||||||||||||||||| |||||||||||||  || |||  ||||||||||||||| |||||| ||||    
T  20672735 aaaagataaaataaagtcaaactgtttttataagctatcctggagagcttatgaaaataagctgaaaacagctta 20672809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 123 - 233
Target Start/End: Original strand, 37945576 - 37945686
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgt 222  Q
    |||||||  |||||||| |||||||  || ||||||||||||| ||  | ||||| ||||  |||| | ||||| ||||||| ||| |||||||||||||    
T  37945576 ttaaattaattttgtatatgctatagttgtttttataagctatattgtacaacttctgaaaataagttaaaaaatgcttatggaaattgtcataagctgt 37945675  T
Q  223 tttcataagtt 233  Q
    ||||| |||||    
T  37945676 tttcagaagtt 37945686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 199 - 277
Target Start/End: Complemental strand, 40859796 - 40859719
Alignment:
Q  199 cttatgaaaagtgtcataagctgttttcataagttttcgaaaagagtctcataaaacttatgccagtagataagctcaa 277  Q
    |||||||||| |||||||||||||||||||||| | || |||| || |||| ||||||||||  || ||||||||||||    
T  40859796 cttatgaaaattgtcataagctgttttcataag-tctccaaaacagcctcacaaaacttatgttagcagataagctcaa 40859719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 157 - 277
Target Start/End: Complemental strand, 43717993 - 43717870
Alignment:
Q  157 ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtc---ataagctgttttcataagttttcgaaaagagtctcataaa 253  Q
    |||||||||||| |||||||||||||  |||||| ||||  ||||||||    ||||   |||  ||||||||||||||| ||  ||| ||||||| |||    
T  43717993 ataagctatcttggagaacttatgaaagtaagctaaaaacagcttatgagcgatgtcctcatagtctgttttcataagttctcccaaatagtctcacaaa 43717894  T
Q  254 acttatgccagtagataagctcaa 277  Q
    ||||||| || |||||||||||||    
T  43717893 acttatgtcaatagataagctcaa 43717870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 185 - 277
Target Start/End: Complemental strand, 32841014 - 32840922
Alignment:
Q  185 taagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttttcgaaaagagtctcataaaacttatgccagtagataagctcaa 277  Q
    |||||||||||   |||||||| | ||||||||| |||||||||||||| ||  ||| ||||||  ||||||| ||  |||||||||||||||    
T  32841014 taagctgaaaacaacttatgaacaatgtcataagttgttttcataagttctcccaaacagtctcgcaaaacttgtgtgagtagataagctcaa 32840922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 153 - 231
Target Start/End: Original strand, 16347200 - 16347279
Alignment:
Q  153 ttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtca-taagctgttttcataag 231  Q
    |||||||| |||||||   ||||||||||  |||||||||| || ||||||||||||||||| |||  ||||||||||||    
T  16347200 ttttataaactatcttgttgaacttatgatattaagctgaataaagcttatgaaaagtgtcattaacttgttttcataag 16347279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 243 - 277
Target Start/End: Complemental strand, 9130289 - 9130255
Alignment:
Q  243 agtctcataaaacttatgccagtagataagctcaa 277  Q
    ||||||| |||||||||||||||||||||||||||    
T  9130289 agtctcacaaaacttatgccagtagataagctcaa 9130255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 144 - 233
Target Start/End: Complemental strand, 9956884 - 9956794
Alignment:
Q  144 tataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagtt 233  Q
    ||||||| ||||| |||| ||||||| |||||||||||||  |||||||||||   |||||||| | || ||||| || ||||||||||||    
T  9956884 tataagttgttttcataatctatcttggagaacttatgaaaataagctgaaaactacttatgaacaatgccataaactattttcataagtt 9956794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 126 - 233
Target Start/End: Original strand, 10114471 - 10114579
Alignment:
Q  126 aattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttt 224  Q
    ||||||||| ||||  ||||||||  ||||| || |||||| || |||||| ||||||  |||||||||||  || ||||| || ||| ||||| |||||    
T  10114471 aattgttttggtataagctataagctgttttcattagctatattggagaacatatgaaaataagctgaaaacagcatatgataaatgttataagttgttt 10114570  T
Q  225 tcataagtt 233  Q
    |||||||||    
T  10114571 tcataagtt 10114579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 185 - 233
Target Start/End: Original strand, 10383927 - 10383974
Alignment:
Q  185 taagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagtt 233  Q
    ||||||| |||  ||||||||||| ||||||||||||||||||||||||    
T  10383927 taagctgtaaacagcttatgaaaa-tgtcataagctgttttcataagtt 10383974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 131 - 182
Target Start/End: Original strand, 11861791 - 11861843
Alignment:
Q  131 tttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaa 182  Q
    ||||||||| |||||||||| ||||| |||||||||  |||||||||||||||    
T  11861791 tttttgtatatgctataagttgtttttataagctataatagagaacttatgaa 11861843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 76; Significance: 7e-35; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 123 - 277
Target Start/End: Complemental strand, 17822956 - 17822801
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 221  Q
    |||||||||| || ||| |||||||||| ||||| |||||||||||| |||||||||||||  |||||| ||||| ||||||||||| ||||||||||||    
T  17822956 ttaaattgttattttatatgctataagttgttttcataagctatcttggagaacttatgaaaataagctaaaaaaagcttatgaaaaatgtcataagctg 17822857  T
Q  222 ttttcataagttttcgaaaagagtctcataaaacttatgccagtagataagctcaa 277  Q
    |||||||| ||| ||  ||| ||||||| | |||||||| ||||||||||||||||    
T  17822856 ttttcatatgttctcctaaatagtctcacagaacttatgtcagtagataagctcaa 17822801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 128 - 277
Target Start/End: Complemental strand, 21731742 - 21731592
Alignment:
Q  128 ttgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttc 226  Q
    |||||||||||| |||||||||| ||||| ||||||||| || ||||| |||||||  |||| ||||||| | ||||||||| ||| |||||||||||||    
T  21731742 ttgtttttgtatgtgctataagttgtttttataagctatattggagaatttatgaaagtaagttgaaaaaagtttatgaaaattgtgataagctgttttc 21731643  T
Q  227 ataagttttcgaaaagagtctcataaaacttatgccagtagataagctcaa 277  Q
    ||||||| ||  ||| | ||||| |||||||||| ||||||||| ||||||    
T  21731642 ataagttctcccaaacaatctcacaaaacttatgtcagtagatatgctcaa 21731592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 153 - 277
Target Start/End: Original strand, 54426053 - 54426177
Alignment:
Q  153 ttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttttcgaaaagagtctcataa 252  Q
    |||||||| |||| || |||||||||||||  |||  ||||||| ||||||||||| ||||||||||||||||| |||||| ||  ||  ||||||| ||    
T  54426053 ttttataatctatattggagaacttatgaaaataacttgaaaaaagcttatgaaaattgtcataagctgttttcctaagttctcccaagcagtctcacaa 54426152  T
Q  253 aacttatgccagtagataagctcaa 277  Q
    |||||||||||||||||||||||||    
T  54426153 aacttatgccagtagataagctcaa 54426177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 123 - 267
Target Start/End: Complemental strand, 50681180 - 50681035
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggttt-tataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 221  Q
    ||||||||||||||||| |||||||||| |||| |||||||||| || ||||| |||||||  |||  ||||||| ||||||||||| |||||| | |||    
T  50681180 ttaaattgtttttgtatatgctataagttgtttatataagctatattggagaaattatgaaaataaattgaaaaaagcttatgaaaattgtcattaactg 50681081  T
Q  222 ttttcataagttttcgaaaagagtctcataaaacttatgccagtag 267  Q
    |||||||||||| ||  ||| ||||||| |||||||| || |||||    
T  50681080 ttttcataagttctctcaaacagtctcacaaaacttaagcgagtag 50681035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 153 - 261
Target Start/End: Complemental strand, 30668426 - 30668320
Alignment:
Q  153 ttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttttcgaaaagagtctcataa 252  Q
    |||||||||||||||| || |  ||||||| |||||||||||||| ||||||||||||||||||||||||||||| ||||| || |||| ||||||| ||    
T  30668426 ttttataagctatcttggatagtttatgaaattaagctgaaaaag-cttatgaaaagtgtcataagctgttttcacaagttctccaaaa-agtctcaaaa 30668329  T
Q  253 aacttatgc 261  Q
    |||||||||    
T  30668328 aacttatgc 30668320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 134 - 271
Target Start/End: Complemental strand, 50662818 - 50662680
Alignment:
Q  134 ttgtatttgctataagtggttt-tataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagt 232  Q
    |||||| |||||||||| |||| |||||||||| || ||||| || ||||  |||| ||||||| ||||||||||| |||||| | ||||||||||||||    
T  50662818 ttgtatatgctataagttgtttatataagctatattggagaaattgtgaaaataagttgaaaaaagcttatgaaaattgtcattaactgttttcataagt 50662719  T
Q  233 tttcgaaaagagtctcataaaacttatgccagtagataa 271  Q
    | ||  |||||||||||||||||||| ||  ||||||||    
T  50662718 tctcttaaagagtctcataaaacttaagcgggtagataa 50662680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 153 - 277
Target Start/End: Complemental strand, 26924 - 26801
Alignment:
Q  153 ttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttttcgaaaagagtctcataa 252  Q
    ||||||||||||| || |||||||||||||  ||| ||||||||| ||| |||||  ||||||||||||||||||||| || ||| ||| ||||| | ||    
T  26924 ttttataagctatattggagaacttatgaaaataatctgaaaaag-cttgtgaaatttgtcataagctgttttcataatttctcggaaacagtctaacaa 26826  T
Q  253 aacttatgccagtagataagctcaa 277  Q
    | ||||||||||| |||||||||||    
T  26825 agcttatgccagttgataagctcaa 26801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 159 - 274
Target Start/End: Complemental strand, 13126630 - 13126515
Alignment:
Q  159 aagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttttcgaaaagagtctcataaaactta 258  Q
    |||||||||| |||||||||||||  |||||||||||| |||||||| || |||||||||||||||| ||||||| |   ||| ||||||| ||||||||    
T  13126630 aagctatcttcgagaacttatgaaaataagctgaaaaaagcttatgataaatgtcataagctgtttttataagttcttccaaacagtctcacaaaactta 13126531  T
Q  259 tgccagtagataagct 274  Q
    ||  ||||| ||||||    
T  13126530 tgttagtaggtaagct 13126515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 131 - 277
Target Start/End: Original strand, 22030190 - 22030337
Alignment:
Q  131 tttttgtatttgctataagtggtt-ttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcata 229  Q
    ||||||||| |||||||||| ||| ||| ||| ||  ||||||||||||||||  ||| |||| ||| |||| |||||| ||||||||||||||||||||    
T  22030190 tttttgtatatgctataagttgttcttacaagttaaattagagaacttatgaaaataacctgagaaaagcttttgaaaattgtcataagctgttttcata 22030289  T
Q  230 agttttcgaaaagagtctcataaaacttatgccagtagataagctcaa 277  Q
    |||| ||  ||| || |||| ||||||||||| | |||| ||||||||    
T  22030290 agttctcccaaataggctcacaaaacttatgctaatagacaagctcaa 22030337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 123 - 273
Target Start/End: Complemental strand, 53294205 - 53294054
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 221  Q
    ||||||||||||||||| |||||||||| ||||| |||| |||| ||||||||||||||||   ||||||||||  |||| ||||||   ||||||  ||    
T  53294205 ttaaattgtttttgtatatgctataagttgtttttataaactatattagagaacttatgaaaacaagctgaaaatagcttttgaaaaccatcataatttg 53294106  T
Q  222 ttttcataagttttcgaaaagagtctcataaaacttatgccagtagataagc 273  Q
    ||||||| |||||||  ||| ||||| | |||||| ||| ||||||||||||    
T  53294105 ttttcatgagttttcccaaacagtcttacaaaactcatgtcagtagataagc 53294054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 152 - 233
Target Start/End: Original strand, 29657393 - 29657474
Alignment:
Q  152 gttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagtt 233  Q
    |||||| ||||||| |||||||| ||||||| ||||||| ||||| |||| |||||| ||||||||||||||||||||||||    
T  29657393 gttttacaagctatattagagaagttatgaaattaagctcaaaaatgcttttgaaaattgtcataagctgttttcataagtt 29657474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 157 - 274
Target Start/End: Original strand, 55302263 - 55302380
Alignment:
Q  157 ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttttcgaaaagagtctcataaaact 256  Q
    ||||||||| || || ||||||||||  |||||||||||| ||||| ||||| |||||||||||||||  ||||||||||   || || |||| ||||||    
T  55302263 ataagctatgttggaaaacttatgaaaataagctgaaaaaagcttacgaaaattgtcataagctgtttctataagttttccggaacaggctcacaaaact 55302362  T
Q  257 tatgccagtagataagct 274  Q
    ||||||| ||||||||||    
T  55302363 tatgccattagataagct 55302380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 159 - 271
Target Start/End: Original strand, 24169279 - 24169391
Alignment:
Q  159 aagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttttcgaaaagagtctcataaaactta 258  Q
    |||||||||| |||| ||||||||  |||| |||||||  |||||||||| ||||||||||| |||| | ||||| ||  ||| ||||||| ||||||||    
T  24169279 aagctatcttggagagcttatgaaaataagttgaaaaaatcttatgaaaaatgtcataagctatttttaaaagttctctcaaatagtctcacaaaactta 24169378  T
Q  259 tgccagtagataa 271  Q
    |||||||||||||    
T  24169379 tgccagtagataa 24169391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 128 - 271
Target Start/End: Original strand, 2244032 - 2244179
Alignment:
Q  128 ttgtttttgtatt-tgctataagtggtttta---taagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgtt 223  Q
    ||||||||||||| |||||||||| ||||||   |||||||| || |||||||||||||  |||| ||||||| | ||||||| | ||||||||||||||    
T  2244032 ttgtttttgtattatgctataagttgttttaatataagctatattggagaacttatgaaaataaggtgaaaaaagtttatgaatattgtcataagctgtt 2244131  T
Q  224 ttcataagttttcgaaaagagtctcataaaacttatgccagtagataa 271  Q
    || | || || ||  ||| ||| ||| |||||||||| ||||||||||    
T  2244132 tttaaaaattctcccaaacagtttcaaaaaacttatgtcagtagataa 2244179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 156 - 277
Target Start/End: Complemental strand, 25904280 - 25904159
Alignment:
Q  156 tataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttttcgaaaagagtctcataaaac 255  Q
    |||||||| | || |||||||||| ||  |||||||||||| ||||||||||| || ||||||||||||||||||| | ||  ||| ||||||| ||||     
T  25904280 tataagctgttttggagaacttataaaaataagctgaaaaaagcttatgaaaaatggcataagctgttttcataagctctcccaaacagtctcacaaaat 25904181  T
Q  256 ttatgccagtagataagctcaa 277  Q
    ||||| || | |||||||||||    
T  25904180 ttatgtcattggataagctcaa 25904159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 131 - 227
Target Start/End: Complemental strand, 55414503 - 55414406
Alignment:
Q  131 tttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttca 227  Q
    |||||| || |||||||| | ||||| ||||| |||||| |||||||||||||  |||| ||||||| ||||||||||| ||||||||||||||||||    
T  55414503 tttttgcatatgctataaattgttttcataagttatcttggagaacttatgaaaataagttgaaaaaagcttatgaaaaatgtcataagctgttttca 55414406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 125 - 230
Target Start/End: Complemental strand, 7839450 - 7839344
Alignment:
Q  125 aaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgtt 223  Q
    ||||||||||||||| |||||||| | ||||| ||||||||  ||  |||||||| |||  |||| ||||||| ||||||||||| ||||||||| ||||    
T  7839450 aaattgtttttgtatatgctataaattgtttttataagctagattgaagaacttacgaaaataagttgaaaaaagcttatgaaaattgtcataagttgtt 7839351  T
Q  224 ttcataa 230  Q
    |||||||    
T  7839350 ttcataa 7839344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 153 - 277
Target Start/End: Complemental strand, 39603230 - 39603107
Alignment:
Q  153 ttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttttcgaaaagagtctcataa 252  Q
    ||||||||| ||| || |||||||||||||  |||  | ||||| |||||| |||| ||||||||||||||||| |||||| ||  ||| ||||||| ||    
T  39603230 ttttataaggtatattggagaacttatgaaaataacttaaaaaaagcttataaaaattgtcataagctgttttcctaagttctcccaaacagtctcacaa 39603131  T
Q  253 aacttatgccagtagataagctcaa 277  Q
    ||||||| ||| |||| ||||||||    
T  39603130 aacttataccaataga-aagctcaa 39603107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 127 - 277
Target Start/End: Complemental strand, 35571718 - 35571567
Alignment:
Q  127 attgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgtttt 225  Q
    |||||||| ||||  ||||||||  ||||| ||||||||||||||||||||| ||||  |||| |||||   ||| ||||| ||||| ||||||||||||    
T  35571718 attgttttcgtataagctataagctgttttcataagctatcttagagaacttgtgaaaataagttgaaaccagctcatgaacagtgtaataagctgtttt 35571619  T
Q  226 cataagttttcgaaaagagtctcataaaacttatgccagtagataagctcaa 277  Q
     | ||||| ||  |||   || || ||||||||||| |||||||||||||||    
T  35571618 taaaagttctcccaaactatcccacaaaacttatgctagtagataagctcaa 35571567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 405 - 501
Target Start/End: Complemental strand, 30668099 - 30668012
Alignment:
Q  405 gttatttctacactaaaaaataaaataaagtcaaactgtttt-ataagctattgtgaagactttatgaaaataagctaaaaacaacttagggatatgt 501  Q
    ||||||||||||| |||||||||||||||| |||||||| || |||||||| |          |||||||||||||||||||||||||||||||||||    
T  30668099 gttatttctacaccaaaaaataaaataaagccaaactgtcttcataagctact----------tatgaaaataagctaaaaacaacttagggatatgt 30668012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 131 - 233
Target Start/End: Complemental strand, 46588157 - 46588053
Alignment:
Q  131 tttttgtatttgctataagtggtttt--ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcat 228  Q
    ||||| ||| |||||||||| |||||  ||||| ||| || |||||||||||||  |||| || |||||||||||||||| ||||||||| | ||||| |    
T  46588157 tttttatatatgctataagttgttttttataagttatattggagaacttatgaaaataagttggaaaaggcttatgaaaattgtcataagttattttcgt 46588058  T
Q  229 aagtt 233  Q
    |||||    
T  46588057 aagtt 46588053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 185 - 274
Target Start/End: Complemental strand, 49939979 - 49939890
Alignment:
Q  185 taagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttttcgaaaagagtctcataaaacttatgccagtagataagct 274  Q
    |||||||||||  ||||||||| | ||||||||||| |||||||||||| |   ||| ||||||| ||| ||||||| ||||||||||||    
T  49939979 taagctgaaaacagcttatgaacaatgtcataagctcttttcataagttcttccaaatagtctcacaaagcttatgctagtagataagct 49939890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 190 - 277
Target Start/End: Complemental strand, 15173326 - 15173239
Alignment:
Q  190 tgaaaaaggcttatgaaaagtgtcataagctgttttcataagttttcgaaaagagtctcataaaacttatgccagtagataagctcaa 277  Q
    |||||||  |||||||||| ||||||||||| |||||||||  | ||  ||| ||||||| |||||||||| ||||||||||| ||||    
T  15173326 tgaaaaaaacttatgaaaattgtcataagctattttcataaagtctcccaaacagtctcacaaaacttatgtcagtagataagttcaa 15173239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 129 - 203
Target Start/End: Complemental strand, 16200066 - 16199991
Alignment:
Q  129 tgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttat 203  Q
    ||||||||||| |||||||||  ||||| |||||||||||| ||| |||||||||  |||||| ||||||||||||    
T  16200066 tgtttttgtatatgctataagctgttttcataagctatcttggaggacttatgaaaataagctaaaaaaggcttat 16199991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 123 - 259
Target Start/End: Original strand, 25332753 - 25332891
Alignment:
Q  123 ttaaattgtttttgtatttgctataag-tggttttataagctatcttag-agaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagct 220  Q
    |||||||||||||||||  ||| |||| |  |||||||||||||||||  ||||||||||||  |||||||||||   |||||||| | || |||||| |    
T  25332753 ttaaattgtttttgtataagctctaagctatttttataagctatcttatcagaacttatgaaaataagctgaaaacaacttatgaataatgccataagtt 25332852  T
Q  221 gttttcataagttttcgaaaagagtctcataaaacttat 259  Q
    ||||||  ||||| ||  ||| ||||||| |||||||||    
T  25332853 gttttcgcaagttctcccaaatagtctcacaaaacttat 25332891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 208 - 277
Target Start/End: Complemental strand, 437169 - 437100
Alignment:
Q  208 agtgtcataagctgttttcataagttttcgaaaagagtctcataaaacttatgccagtagataagctcaa 277  Q
    ||||||||||| |||||||||||||||||  ||| ||||||| |||| |||||| | |||||| ||||||    
T  437169 agtgtcataagttgttttcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaa 437100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 126 - 222
Target Start/End: Original strand, 41512633 - 41512730
Alignment:
Q  126 aattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgt 222  Q
    |||||||||||  | |||||||||| ||||| ||||||| |||   ||||||||||||  |||| ||| ||| ||||||||||||||| |||||||||    
T  41512633 aattgtttttgcgtatgctataagttgttttcataagctttctggaagaacttatgaaaataagatgataaaagcttatgaaaagtgttataagctgt 41512730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 153 - 218
Target Start/End: Complemental strand, 46592269 - 46592204
Alignment:
Q  153 ttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataag 218  Q
    ||||||||| ||| || |||||||||||||  |||| || |||||||||||||||| |||||||||    
T  46592269 ttttataagttatattggagaacttatgaaaataagttggaaaaggcttatgaaaattgtcataag 46592204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 157 - 277
Target Start/End: Original strand, 1706636 - 1706756
Alignment:
Q  157 ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttttcgaaaagagtctcataaaact 256  Q
    |||| ||||||| || | ||||||||  |||| || |||  ||||||||| | || |||||||||||||||||| || ||  |||  |||||| ||||||    
T  1706636 ataaactatcttggacagcttatgaaaataagttggaaatagcttatgaacaatgccataagctgttttcataatttctctcaaaccgtctcacaaaact 1706735  T
Q  257 tatgccagtagataagctcaa 277  Q
    |||| |||||||||| |||||    
T  1706736 tatgtcagtagataaactcaa 1706756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 170 - 230
Target Start/End: Original strand, 21523585 - 21523644
Alignment:
Q  170 gagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataa 230  Q
    ||||| |||||||  ||||||||||||| |||||||||| ||||||||| |||||||||||    
T  21523585 gagaagttatgaaaataagctgaaaaag-cttatgaaaaatgtcataagttgttttcataa 21523644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 185 - 233
Target Start/End: Original strand, 41336802 - 41336850
Alignment:
Q  185 taagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagtt 233  Q
    |||| ||||||| ||||||||||| ||||||||||||||||| ||||||    
T  41336802 taagttgaaaaaagcttatgaaaactgtcataagctgttttcttaagtt 41336850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 210 - 277
Target Start/End: Original strand, 52172791 - 52172859
Alignment:
Q  210 tgtcataagctgttttcataagttttcgaaaagagtctcataaa-acttatgccagtagataagctcaa 277  Q
    |||||||||||||||||||||||||||   || ||||||| ||| |||||||||||||  |||||||||    
T  52172791 tgtcataagctgttttcataagttttccccaacagtctcacaaatacttatgccagtatgtaagctcaa 52172859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 125 - 231
Target Start/End: Original strand, 2996554 - 2996660
Alignment:
Q  125 aaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgtt 223  Q
    ||||||||||| |||  | ||||||| ||||| |||||||||||| |||| | ||||||  |||| ||||||| ||||||| | | ||||||||| ||||    
T  2996554 aaattgtttttatataagttataagttgttttcataagctatcttggagagcgtatgaaaataagttgaaaaaagcttatggaca-tgtcataagttgtt 2996652  T
Q  224 ttcataag 231  Q
    ||||||||    
T  2996653 ttcataag 2996660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 296 - 351
Target Start/End: Complemental strand, 30668303 - 30668248
Alignment:
Q  296 tagtttctttaagcattgtaattgtacctttggattaaaattctaattgcatagcc 351  Q
    ||||||||||||   | ||||||||||||||||||| ||||| |||||||||||||    
T  30668303 tagtttctttaactgtagtaattgtacctttggattgaaattttaattgcatagcc 30668248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 157 - 226
Target Start/End: Original strand, 1407970 - 1408040
Alignment:
Q  157 ataagctatcttagagaacttatgaatttaagctgaaaaag-gcttatgaaaagtgtcataagctgttttc 226  Q
    |||||||||||  || || |||||||  ||||||||||||  ||||||||||| |||||||||||||||||    
T  1407970 ataagctatctaggaaaatttatgaagataagctgaaaaacagcttatgaaaaatgtcataagctgttttc 1408040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 437 - 486
Target Start/End: Original strand, 18011874 - 18011924
Alignment:
Q  437 aaactgtttt-ataagctattgtgaagactttatgaaaataagctaaaaac 486  Q
    |||||||||| |||||||||  |||||| ||||||||||||||||||||||    
T  18011874 aaactgttttcataagctatcttgaagagtttatgaaaataagctaaaaac 18011924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 123 - 233
Target Start/End: Complemental strand, 37864043 - 37863935
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgt 222  Q
    ||||||||||||||| |  | ||||||  |||| |||||||||||| | ||  ||||||||| ||| ||||||   ||||||||  ||||||||||||||    
T  37864043 ttaaattgtttttgtttaagatataagctgtttcataagctatcttggtgaggttatgaatt-aaggtgaaaacaacttatgaac-gtgtcataagctgt 37863946  T
Q  223 tttcataagtt 233  Q
    |||||||||||    
T  37863945 tttcataagtt 37863935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 163 - 233
Target Start/End: Original strand, 55064855 - 55064925
Alignment:
Q  163 tatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagtt 233  Q
    |||||| |||||||||||||  |||| ||||||| |||  |||||| ||||||||| |||||||| |||||    
T  55064855 tatcttggagaacttatgaaaataagatgaaaaaagctattgaaaaatgtcataagttgttttcaaaagtt 55064925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 123 - 227
Target Start/End: Complemental strand, 54069508 - 54069403
Alignment:
Q  123 ttaaattgtttttgtatttgctataa-gtggttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 221  Q
    ||||||||||||||||| ||||||||  || ||||||||| ||| ||  ||||| ||||||  |||| | ||||  ||||||||||| |||  |||||||    
T  54069508 ttaaattgtttttgtatatgctataatttgtttttataagttatattgaagaacatatgaaaataagttaaaaacagcttatgaaaattgttgtaagctg 54069409  T
Q  222 ttttca 227  Q
    ||||||    
T  54069408 ttttca 54069403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 436 - 492
Target Start/End: Complemental strand, 55547112 - 55547055
Alignment:
Q  436 caaactgtttt-ataagctattgtgaagactttatgaaaataagctaaaaacaactta 492  Q
    ||||||||||| |||||||||  |||| | |||||| |||||||||||||||||||||    
T  55547112 caaactgttttcataagctatgctgaaaagtttatggaaataagctaaaaacaactta 55547055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 182
Target Start/End: Complemental strand, 15177293 - 15177233
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtgg-ttttataagctatcttagagaacttatgaa 182  Q
    |||||||||| || ||| |||||||||||| |||||||||||||  ||||||||| |||||    
T  15177293 ttaaattgttcttctatgtgctataagtggtttttataagctatactagagaactaatgaa 15177233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 169 - 233
Target Start/End: Original strand, 20109611 - 20109675
Alignment:
Q  169 agagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagtt 233  Q
    ||||||||||| ||  | ||| ||||||  |||||||||| |||||||||||||||||| |||||    
T  20109611 agagaacttataaaaatcagcagaaaaaaacttatgaaaaatgtcataagctgttttcaaaagtt 20109675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 173 - 277
Target Start/End: Original strand, 23459658 - 23459761
Alignment:
Q  173 aacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttttcgaaaagagtctcataaaacttatgccagtagataag 272  Q
    ||||||||||| |||| ||||||   ||||| || | ||||||||||| |||||||||||| ||  ||| ||||| |  | |||||||| ||||||||||    
T  23459658 aacttatgaatataagttgaaaataacttattaaca-tgtcataagcttttttcataagttctccgaaacagtcttaccatacttatgctagtagataag 23459756  T
Q  273 ctcaa 277  Q
    |||||    
T  23459757 ctcaa 23459761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 185 - 233
Target Start/End: Complemental strand, 43886159 - 43886112
Alignment:
Q  185 taagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagtt 233  Q
    |||||||||||  ||||||||||| || |||||||||||||||||||||    
T  43886159 taagctgaaaatagcttatgaaaa-tgccataagctgttttcataagtt 43886112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 185 - 233
Target Start/End: Original strand, 56249566 - 56249613
Alignment:
Q  185 taagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagtt 233  Q
    |||| ||||||| ||||||||||| |||||||||||||||| |||||||    
T  56249566 taagttgaaaaaagcttatgaaaa-tgtcataagctgttttgataagtt 56249613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 72; Significance: 2e-32; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 123 - 277
Target Start/End: Complemental strand, 16937974 - 16937819
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 221  Q
    ||||||||||||||||| |||||||||| ||||| ||| ||||| || ||||||||| |||  |||||||||||| ||||||||||  ||||||||||||    
T  16937974 ttaaattgtttttgtatatgctataagttgtttttatacgctatattggagaacttaggaaaataagctgaaaaaagcttatgaaatttgtcataagctg 16937875  T
Q  222 ttttcataagttttcgaaaagagtctcataaaacttatgccagtagataagctcaa 277  Q
    |||||||||||| |   ||| | ||||| ||||||||||| |||||||||||||||    
T  16937874 ttttcataagttcttccaaacactctcacaaaacttatgctagtagataagctcaa 16937819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 123 - 257
Target Start/End: Complemental strand, 16458070 - 16457935
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 221  Q
    ||||||||||||||||| |||||||||| ||||| || |||||  || |||||||| ||||  ||| |||||||  ||||||||||| ||||||||||||    
T  16458070 ttaaattgtttttgtatatgctataagttgtttttatgagctaaattggagaacttgtgaaaataaactgaaaagagcttatgaaaactgtcataagctg 16457971  T
Q  222 ttttcataagttttcgaaaagagtctcataaaactt 257  Q
    |||||||||||| ||  ||| ||||||| |||||||    
T  16457970 ttttcataagttctcccaaacagtctcacaaaactt 16457935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 122 - 277
Target Start/End: Original strand, 10639931 - 10640087
Alignment:
Q  122 attaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagct 220  Q
    |||||||||||||||||| ||  || ||| ||||  |||| |||| || |||||||||||||  ||||||  |||| ||||||||||| |||||||||||    
T  10639931 attaaattgtttttgtatatgtgatgagttgtttacataaactattttggagaacttatgaaaataagctagaaaaagcttatgaaaaatgtcataagct 10640030  T
Q  221 gttttcataagttttcgaaaagagtctcataaaacttatgccagtagataagctcaa 277  Q
    ||||||||||||| ||  ||| | | ||| |||||||||| |||||||||| |||||    
T  10640031 gttttcataagttctcccaaacaatatcacaaaacttatgtcagtagataaactcaa 10640087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 123 - 277
Target Start/End: Original strand, 39105443 - 39105599
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 221  Q
    |||||||||||| ||||  |||||||   ||||| |||||||||||| |||||||||||||  |||||| ||||  ||||||||| | ||||||||||||    
T  39105443 ttaaattgttttcgtataagctataatctgttttcataagctatcttggagaacttatgaaaataagctaaaaatagcttatgaacaatgtcataagctg 39105542  T
Q  222 ttttcataagtt-ttcgaaaagagtctcataaaacttatgccagtagataagctcaa 277  Q
    ||||||||| || | | |||| ||||||||||||||||| ||  ||||||| |||||    
T  39105543 ttttcataaattctcccaaaaaagtctcataaaacttatacccctagataaactcaa 39105599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 131 - 277
Target Start/End: Original strand, 43300865 - 43301012
Alignment:
Q  131 tttttgtatttgctataagtggtttta-taagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcata 229  Q
    ||||||||| | |||||||| |||||  ||||||||||| |||||||||||||  |||||||||| | ||||||  ||| ||||||| |||||||| |||    
T  43300865 tttttgtatatcctataagttgtttttgtaagctatcttggagaacttatgaaaataagctgaaacatgcttatataaaatgtcataggctgtttttata 43300964  T
Q  230 agttttcgaaaagagtctcataaaacttatgccagtagataagctcaa 277  Q
    | || ||   || ||||||||||||||||||||| || ||||||||||    
T  43300965 acttctccccaacagtctcataaaacttatgccattatataagctcaa 43301012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 157 - 277
Target Start/End: Complemental strand, 9202804 - 9202684
Alignment:
Q  157 ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttttcgaaaagagtctcataaaact 256  Q
    ||||| ||||||  ||||||||||||  ||||||| |||  ||||||||| | ||||||||||||||| ||| |||||||  ||| ||||| | ||||||    
T  9202804 ataagttatcttgaagaacttatgaaaataagctggaaacagcttatgaacaatgtcataagctgtttccattagttttccgaaatagtcttacaaaact 9202705  T
Q  257 tatgccagtagataagctcaa 277  Q
    |||||||| ||||||||||||    
T  9202704 tatgccaggagataagctcaa 9202684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 123 - 273
Target Start/End: Original strand, 29925820 - 29925970
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 221  Q
    ||||||||||| ||||| |||||||||| ||||  ||||||||| || |||||||||||||  |||| |||||||  |  ||||| | ||||||||||||    
T  29925820 ttaaattgtttctgtatgtgctataagttgtttacataagctatattggagaacttatgaaaataagttgaaaaaaacacatgaacattgtcataagctg 29925919  T
Q  222 ttttcataagttttcgaaaagagtctcataaaacttatgccagtagataagc 273  Q
    |||||||||||| ||  |||  |||||| ||||||| ||| |||||||||||    
T  29925920 ttttcataagttctcccaaacggtctcacaaaactt-tgctagtagataagc 29925970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 124 - 277
Target Start/End: Original strand, 40426745 - 40426899
Alignment:
Q  124 taaattgtttttgtatttgctataagtggtttta-taagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgt 222  Q
    ||||||||||||||||||||| ||||  ||||   |||||| |||| ||||||||| |||  |||||| ||||| ||||||||||| || ||||||||||    
T  40426745 taaattgtttttgtatttgctgtaagctgtttccgtaagctgtcttggagaacttacgaaaataagcttaaaaaagcttatgaaaaatggcataagctgt 40426844  T
Q  223 tttcataagttttcgaaaagagtctcataaaacttatgccagtagataagctcaa 277  Q
    |||||||||    |  ||| ||||||| |||| ||||| || |||||||||||||    
T  40426845 tttcataagcacccccaaacagtctcacaaaatttatgtcattagataagctcaa 40426899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 192 - 277
Target Start/End: Original strand, 31038333 - 31038418
Alignment:
Q  192 aaaaaggcttatgaaaagtgtcataagctgttttcataagttttcgaaaagagtctcataaaacttatgccagtagataagctcaa 277  Q
    ||||| ||||||||||| ||||||||||| |||| ||||||| || |||| ||| ||| |||||||||||| ||||||||||||||    
T  31038333 aaaaaagcttatgaaaaatgtcataagctatttttataagttgtccaaaacagtatcacaaaacttatgccggtagataagctcaa 31038418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 192 - 277
Target Start/End: Original strand, 31047557 - 31047642
Alignment:
Q  192 aaaaaggcttatgaaaagtgtcataagctgttttcataagttttcgaaaagagtctcataaaacttatgccagtagataagctcaa 277  Q
    ||||| ||||||||||| ||||||||||| |||| ||||||| || |||| ||| ||| |||||||||||| ||||||||||||||    
T  31047557 aaaaaagcttatgaaaaatgtcataagctatttttataagttgtccaaaacagtatcacaaaacttatgccggtagataagctcaa 31047642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 157 - 277
Target Start/End: Complemental strand, 7706054 - 7705934
Alignment:
Q  157 ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttttcgaaaagagtctcataaaact 256  Q
    ||||||||| || |||||||| ||||  ||||| |||||| ||   |||||| |||||||||||||||||||||||| ||  ||||||  ||| ||||||    
T  7706054 ataagctatattggagaacttgtgaaaataagccgaaaaaagcaggtgaaaactgtcataagctgttttcataagttctcccaaagagcgtcacaaaact 7705955  T
Q  257 tatgccagtagataagctcaa 277  Q
    ||||| |||||||| ||||||    
T  7705954 tatgctagtagatatgctcaa 7705934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 157 - 277
Target Start/End: Original strand, 7984983 - 7985103
Alignment:
Q  157 ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttttcgaaaagagtctcataaaact 256  Q
    |||||||||||| ||||| |||||||  |||||||||||  ||||||||| |  |||| ||||||||||| |||| | ||  ||| ||||||| ||| ||    
T  7984983 ataagctatcttggagaatttatgaaaataagctgaaaacagcttatgaacaacgtcacaagctgttttcttaagctctcccaaatagtctcacaaagct 7985082  T
Q  257 tatgccagtagataagctcaa 277  Q
    ||||||||||||||| |||||    
T  7985083 tatgccagtagataatctcaa 7985103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 153 - 277
Target Start/End: Complemental strand, 12857398 - 12857274
Alignment:
Q  153 ttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttttcgaaaagagtctcataa 252  Q
    ||||||||||||| || |||||||||  ||  |||||||||||| |||| |||||| ||||||||| |||||||||||||| ||   || ||| ||| ||    
T  12857398 ttttataagctatattggagaacttacaaaaataagctgaaaaaagcttgtgaaaattgtcataagttgttttcataagttctccggaaaagtttcacaa 12857299  T
Q  253 aacttatgccagtagataagctcaa 277  Q
    |||||| | || |||||||||||||    
T  12857298 aacttacgtcaatagataagctcaa 12857274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 153 - 233
Target Start/End: Complemental strand, 12857765 - 12857685
Alignment:
Q  153 ttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagtt 233  Q
    ||||||||||||| || |||||||||||||  |||||||||||| | || |||||| ||||||||| ||||||||||||||    
T  12857765 ttttataagctatattggagaacttatgaaaataagctgaaaaaaggttgtgaaaattgtcataagttgttttcataagtt 12857685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 156 - 272
Target Start/End: Complemental strand, 42500298 - 42500184
Alignment:
Q  156 tataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttttcgaaaagagtctcataaaac 255  Q
    |||||||||| || |||||||||||||  |||| |||||||| |||||||||| |||| |||| ||||| |||||||| || ||| |||||||| |||||    
T  42500298 tataagctatattggagaacttatgaaaataagttgaaaaag-cttatgaaaattgtcgtaagttgtttccataagttctccaaa-gagtctcacaaaac 42500201  T
Q  256 ttatgccagtagataag 272  Q
    ||||| |||||| ||||    
T  42500200 ttatgtcagtaggtaag 42500184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 126 - 258
Target Start/End: Original strand, 32009674 - 32009808
Alignment:
Q  126 aattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggctt-atgaaaagtgtcataagctgtt 223  Q
    ||||||| |||||| |||||||| | ||||| ||||||||| || |||||||||||||   ||| | ||||| |||| ||||||| ||||| ||||||||    
T  32009674 aattgttcttgtatatgctataaattgtttttataagctatattggagaacttatgaaaacaagttcaaaaaagctttatgaaaattgtcacaagctgtt 32009773  T
Q  224 ttcataagttttcgaaaagagtctcataaaactta 258  Q
    ||||||||||||   ||| ||||||| ||||||||    
T  32009774 ttcataagtttttccaaatagtctcacaaaactta 32009808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 169 - 233
Target Start/End: Complemental strand, 3735202 - 3735138
Alignment:
Q  169 agagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagtt 233  Q
    ||||||||||||||  |||||||||||| |||| |||||| ||||||||||||||||||| ||||    
T  3735202 agagaacttatgaagataagctgaaaaaagcttttgaaaattgtcataagctgttttcatcagtt 3735138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 158 - 277
Target Start/End: Complemental strand, 35445898 - 35445780
Alignment:
Q  158 taagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttttcgaaaagagtctcataaaactt 257  Q
    ||||||||||| ||||| |||||||  |||| |||||| | || ||||| | ||| ||||||||||||||||| || |   ||||||||||| |||||||    
T  35445898 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaaca-tgttataagctgttttcataaattctgtcaaagagtctcacaaaactt 35445800  T
Q  258 atgccagtagataagctcaa 277  Q
    ||| |||||||||| |||||    
T  35445799 atgtcagtagataaactcaa 35445780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 157 - 270
Target Start/End: Complemental strand, 19460442 - 19460330
Alignment:
Q  157 ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttttcgaaaagagtctcataaaact 256  Q
    ||||| ||||||  ||||||||||||  |||||||||| || |||||||||| | ||||||| ||||| || ||||| ||  ||| |||||||  |||||    
T  19460442 ataagttatcttcaagaacttatgaaaataagctgaaacag-cttatgaaaaatatcataagttgtttccaaaagttctcctaaacagtctcactaaact 19460344  T
Q  257 tatgccagtagata 270  Q
    ||||||||||||||    
T  19460343 tatgccagtagata 19460330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 153 - 230
Target Start/End: Original strand, 37954696 - 37954773
Alignment:
Q  153 ttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataa 230  Q
    ||||||||||||| || |||||| ||||||  |||| ||||||| ||| ||||||| | |||||||||||||||||||    
T  37954696 ttttataagctatattggagaacatatgaaaataagttgaaaaaagctaatgaaaattttcataagctgttttcataa 37954773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 157 - 277
Target Start/End: Original strand, 15246847 - 15246967
Alignment:
Q  157 ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttttcgaaaagagtctcataaaact 256  Q
    |||||||||||||||||| | || ||  |||| || ||||  ||||||||   ||||||||| || ||||||||||| ||  ||| | ||| ||||||||    
T  15246847 ataagctatcttagagaaatgataaaaataagttgcaaaaaacttatgaatgatgtcataagttgctttcataagttctcccaaacattctaataaaact 15246946  T
Q  257 tatgccagtagataagctcaa 277  Q
    |||| ||||||||||||||||    
T  15246947 tatgtcagtagataagctcaa 15246967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 142 - 233
Target Start/End: Complemental strand, 1465091 - 1465000
Alignment:
Q  142 gctataagtggttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagtt 233  Q
    |||||||||  |||||||||||||||| ||| |||| ||||  |||||||||||   |||||||  | || |||||||||||||||||||||    
T  1465091 gctataagttattttataagctatcttggaggacttgtgaaaataagctgaaaacaacttatgagcaatgccataagctgttttcataagtt 1465000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 127 - 221
Target Start/End: Original strand, 25461074 - 25461169
Alignment:
Q  127 attgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 221  Q
    ||||||||||||| || ||||||| ||||| ||||||| | || ||||||| |||||  |||||||||||| | ||||||||| || |||||||||    
T  25461074 attgtttttgtatatgttataagttgttttcataagctctattggagaactgatgaaaataagctgaaaaacgtttatgaaaattgccataagctg 25461169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 144 - 277
Target Start/End: Original strand, 11700163 - 11700296
Alignment:
Q  144 tataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttttcgaaaag 242  Q
    ||||||| ||||| ||| |||||| | |||||||||||||  |||| ||||| |   ||||||| | ||||||||| ||||| |||||||| |   |||     
T  11700163 tataagttgttttgatatgctatcgtggagaacttatgaaaataagatgaaacaat-ttatgaacaatgtcataagttgtttccataagttctgtgaaac 11700261  T
Q  243 agtctcataaaacttatgccagtagataagctcaa 277  Q
    ||||||| ||||||||||||||| |||||||||||    
T  11700262 agtctcacaaaacttatgccagtggataagctcaa 11700296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 123 - 233
Target Start/End: Original strand, 2568636 - 2568747
Alignment:
Q  123 ttaaattgttttt-gtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagct 220  Q
    ||||||||||||| ||||  ||||||||| ||||| |||||||||| | |||| || |||||  |||||| ||||   |||||||| | |||||||||||    
T  2568636 ttaaattgtttttcgtataagctataagttgttttcataagctatcatggagagctaatgaaaataagctaaaaataacttatgaata-tgtcataagct 2568734  T
Q  221 gttttcataagtt 233  Q
    |||||||||||||    
T  2568735 gttttcataagtt 2568747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 277
Target Start/End: Original strand, 9107100 - 9107224
Alignment:
Q  153 ttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttttcgaaaagagtctcataa 252  Q
    |||| |||| ||| || |||||||||||||  | ||| |||||| | || |||||| |||| |||||||||||||| |||| ||  ||| | ||||| ||    
T  9107100 ttttgtaagttatattggagaacttatgaaaattagcagaaaaaagtttgtgaaaattgtcctaagctgttttcatgagttctcccaaacattctcacaa 9107199  T
Q  253 aacttatgccagtagataagctcaa 277  Q
    |||||||| || ||||||| |||||    
T  9107200 aacttatgtcactagataaactcaa 9107224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 241 - 277
Target Start/End: Complemental strand, 22209796 - 22209760
Alignment:
Q  241 agagtctcataaaacttatgccagtagataagctcaa 277  Q
    ||||||||| |||||||||||||||||||||||||||    
T  22209796 agagtctcagaaaacttatgccagtagataagctcaa 22209760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 170 - 233
Target Start/End: Complemental strand, 34669773 - 34669709
Alignment:
Q  170 gagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagct-gttttcataagtt 233  Q
    |||||||| |||| ||||||||||||| ||||||||||| |||||| || | |||||||||||||    
T  34669773 gagaacttctgaaattaagctgaaaaaagcttatgaaaaatgtcattagttagttttcataagtt 34669709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 170 - 226
Target Start/End: Original strand, 35446082 - 35446138
Alignment:
Q  170 gagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttc 226  Q
    |||||||||||||  |||||||||||| ||||| ||||| |||||||| ||||||||    
T  35446082 gagaacttatgaaaataagctgaaaaaagcttacgaaaaatgtcataaactgttttc 35446138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 185 - 276
Target Start/End: Complemental strand, 36797124 - 36797032
Alignment:
Q  185 taagctgaaaaaggcttatgaaaagtgtcataa-gctgttttcataagttttcgaaaagagtctcataaaacttatgccagtagataagctca 276  Q
    ||||| |||||| ||||||||||| ||||| || | |||||| ||||||| || |||| | |||||||||||| || |||||||| |||||||    
T  36797124 taagccgaaaaaagcttatgaaaattgtcagaaagttgtttttataagttctccaaaacattctcataaaactaataccagtagagaagctca 36797032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 198 - 277
Target Start/End: Original strand, 3520632 - 3520711
Alignment:
Q  198 gcttatgaaaagtgtcataagctgttttcataagttttcgaaaagagtctcataaaacttatgccagtagataagctcaa 277  Q
    |||||||||||  |||||||| |||||||||||||| ||  ||| ||||||| | ||||||| | ||||||| |||||||    
T  3520632 gcttatgaaaaaagtcataagatgttttcataagttctcccaaacagtctcacacaacttatactagtagatgagctcaa 3520711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 277
Target Start/End: Complemental strand, 3932719 - 3932612
Alignment:
Q  170 gagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttttcgaaaagagtctcataaaacttatgccagtagat 269  Q
    ||||||||| |||  ||||||| |||| ||||||||||| | ||||||||||||||   ||||||||  ||| ||||||| ||| ||||||    |||||    
T  3932719 gagaacttacgaaaataagctgtaaaaagcttatgaaaattatcataagctgtttttgcaagttttctcaaacagtctcacaaagcttatgttgttagat 3932620  T
Q  270 aagctcaa 277  Q
    ||||||||    
T  3932619 aagctcaa 3932612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 157 - 211
Target Start/End: Complemental strand, 4014480 - 4014426
Alignment:
Q  157 ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtg 211  Q
    |||||||||||| |||||||||||||  |||||||||||  ||||||||| ||||    
T  4014480 ataagctatcttggagaacttatgaaaataagctgaaaacagcttatgaacagtg 4014426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 425 - 492
Target Start/End: Original strand, 12521518 - 12521587
Alignment:
Q  425 taaaataaagtcaaactgtttt--ataagctattgtgaagactttatgaaaataagctaaaaacaactta 492  Q
    ||||||| ||||||||||||||  |||||||||| ||||||  ||||| ||||||||| |||||| ||||    
T  12521518 taaaatagagtcaaactgttttgtataagctattttgaagagcttatggaaataagctgaaaacagctta 12521587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 153 - 227
Target Start/End: Original strand, 39477893 - 39477967
Alignment:
Q  153 ttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttca 227  Q
    ||||||||||||| ||||||||||| ||||  ||||| ||||||  ||| |||||| |||||| |||||| ||||    
T  39477893 ttttataagctatgttagagaacttctgaaaataagcagaaaaaaacttttgaaaattgtcatcagctgtgttca 39477967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 2973557 - 2973524
Alignment:
Q  200 ttatgaaaagtgtcataagctgttttcataagtt 233  Q
    ||||||||| ||||||||||||||||||||||||    
T  2973557 ttatgaaaattgtcataagctgttttcataagtt 2973524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 157 - 232
Target Start/End: Complemental strand, 3280771 - 3280696
Alignment:
Q  157 ataagctatcttagagaactt-atgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagt 232  Q
    |||||||||||| |||||||| |||||  ||| || ||||  ||||||||| | |||||||||||||||||||||||    
T  3280771 ataagctatctttgagaactttatgaaaataaactaaaaagagcttatgaaga-tgtcataagctgttttcataagt 3280696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 198 - 277
Target Start/End: Original strand, 6096602 - 6096681
Alignment:
Q  198 gcttatgaaaagtgtcataagctgttttcataagtt-ttcgaaaagagtctcataaaacttatgccagtagataagctcaa 277  Q
    ||||||||| | ||||| ||||||||| | |||||| |||  ||| ||||||| |||||||||||||||||||||| ||||    
T  6096602 gcttatgaacaatgtcacaagctgtttacgtaagttcttcctaaa-agtctcacaaaacttatgccagtagataagttcaa 6096681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 144 - 208
Target Start/End: Complemental strand, 13697828 - 13697764
Alignment:
Q  144 tataagtggttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaa 208  Q
    ||||||| |||||||||||||| || ||||| |||||||  |||| |||||||  ||||||||||    
T  13697828 tataagttgttttataagctatgttggagaagttatgaaaataagttgaaaaaaacttatgaaaa 13697764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 158 - 274
Target Start/End: Complemental strand, 29845489 - 29845375
Alignment:
Q  158 taagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttttcgaaaagagtctcataaaactt 257  Q
    ||||||||||| ||||| |||||||| |||||||||||  ||||||  || || ||||||||| |||||||||||| ||  | |||||||  ||||  ||    
T  29845489 taagctatcttggagaagttatgaatataagctgaaaacagcttat-taacgtatcataagct-ttttcataagttctcccagagagtcttgtaaatttt 29845392  T
Q  258 atgccagtagataagct 274  Q
    ||| |||||||| ||||    
T  29845391 atgtcagtagattagct 29845375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 170 - 230
Target Start/End: Complemental strand, 32859762 - 32859703
Alignment:
Q  170 gagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataa 230  Q
    ||||| |||||||  ||||||||||||| |||||||||| |||| |||| |||||||||||    
T  32859762 gagaagttatgaaaataagctgaaaaag-cttatgaaaaatgtcgtaagttgttttcataa 32859703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 170 - 230
Target Start/End: Complemental strand, 32861934 - 32861875
Alignment:
Q  170 gagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataa 230  Q
    ||||| |||||||  ||||||||||||| |||||||||| |||| |||| |||||||||||    
T  32861934 gagaagttatgaaaataagctgaaaaag-cttatgaaaaatgtcgtaagttgttttcataa 32861875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 199 - 275
Target Start/End: Original strand, 32942650 - 32942726
Alignment:
Q  199 cttatgaaaagtgtcataagctgttttcataagttttcgaaaagagtctcataaaacttatgccagtagataagctc 275  Q
    |||||||||| ||||||||||||| ||||||| || ||  ||| ||||  | |||||||||| ||||||| ||||||    
T  32942650 cttatgaaaaatgtcataagctgtattcataaattctcccaaacagtcaaacaaaacttatgtcagtagaaaagctc 32942726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 189 - 277
Target Start/End: Original strand, 41419365 - 41419453
Alignment:
Q  189 ctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttttcgaaaagagtctcataaaacttatgccagtagataagctcaa 277  Q
    |||||||  ||| ||||| | |||||||||||||||||| ||||| ||  ||| | ||||| |||| ||||| |||||||| |||||||    
T  41419365 ctgaaaatagctcatgaacaatgtcataagctgttttcacaagttatcccaaacaatctcacaaaatttatgtcagtagattagctcaa 41419453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 161 - 233
Target Start/End: Original strand, 42646685 - 42646757
Alignment:
Q  161 gctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagtt 233  Q
    |||||||| ||||||||||| |  ||| || ||||| ||||||||||| |||| ||| || ||||||||||||    
T  42646685 gctatcttcgagaacttatggaaataaactaaaaaaagcttatgaaaaatgtcctaaacttttttcataagtt 42646757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 72; Significance: 2e-32; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 131 - 277
Target Start/End: Complemental strand, 18405914 - 18405767
Alignment:
Q  131 tttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcata 229  Q
    ||||||||| |||||||||| ||||| |||||||||||| ||||||||||||| |||||||  |||| | |||||||||||||| | | |||||||||||    
T  18405914 tttttgtatatgctataagttgttttcataagctatcttggagaacttatgaaattaagcttgaaaaagattatgaaaagtgtcgtgaactgttttcata 18405815  T
Q  230 agttttcgaaaagagtctcataaaacttatgccagtagataagctcaa 277  Q
    |||| | | ||| ||||||| |||||||||| ||||||||||||||||    
T  18405814 agttcttgcaaacagtctcacaaaacttatgtcagtagataagctcaa 18405767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 123 - 277
Target Start/End: Original strand, 39980708 - 39980863
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 221  Q
    |||||||||||||| |  |||||||||| ||||| ||||||||| || |||||||||||||  |||| ||||||| ||||||||||   |||||||||||    
T  39980708 ttaaattgtttttgaacatgctataagttgtttttataagctatattggagaacttatgaaaataagttgaaaaaagcttatgaaaccagtcataagctg 39980807  T
Q  222 ttttcataagttttcgaaaagagtctcataaaacttatgccagtagataagctcaa 277  Q
    |||||||||||| ||  ||| ||||||| ||||||||||| |||||||||||||||    
T  39980808 ttttcataagttctcttaaacagtctcacaaaacttatgctagtagataagctcaa 39980863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 123 - 277
Target Start/End: Original strand, 20880455 - 20880610
Alignment:
Q  123 ttaaattgtttttgtatttgctataag-tggttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 221  Q
    ||||||||||||||||| ||||||||  || ||||| ||||||| || |||||||||||||  |||||| ||||| ||||||||||| ||||||||||||    
T  20880455 ttaaattgtttttgtatatgctataaactgtttttaaaagctatattggagaacttatgaaaataagctcaaaaaagcttatgaaaattgtcataagctg 20880554  T
Q  222 ttttcataagttttcgaaaagagtctcataaaacttatgccagtagataagctcaa 277  Q
    |||||||| ||| ||  ||| ||||| |  |||||||||| |||||||||||||||    
T  20880555 ttttcataggttctcccaaatagtctaaggaaacttatgcaagtagataagctcaa 20880610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 123 - 277
Target Start/End: Original strand, 30443872 - 30444027
Alignment:
Q  123 ttaaattgtttttgtatttgctataag-tggttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 221  Q
    |||||||| |||||||| ||||||||| || |||||||| |||| || |||||||||||||  |||||||||||| |||| |||||| ||||||||||||    
T  30443872 ttaaattgcttttgtatatgctataagctgtttttataaactatattggagaacttatgaaaataagctgaaaaaagcttgtgaaaattgtcataagctg 30443971  T
Q  222 ttttcataagttttcgaaaagagtctcataaaacttatgccagtagataagctcaa 277  Q
    |||||||||| | |   ||| |||||||  ||| ||||||||||||||||||||||    
T  30443972 ttttcataagctctaccaaacagtctcaccaaatttatgccagtagataagctcaa 30444027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 122 - 270
Target Start/End: Complemental strand, 53789553 - 53789406
Alignment:
Q  122 attaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagct 220  Q
    |||||| |||||| |||| |||||||||| ||| | |||||||||| | ||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  53789553 attaaaatgttttggtatatgctataagttgttatcataagctatcatggagaacttatgaaattaagctgaaaaaagcttatgaaaagtgtcataagct 53789454  T
Q  221 gttttcataagttttcgaaaagagtctcataaaacttatgccagtagata 270  Q
    |||| || ||||| ||  ||  ||||||| |||||||||| |||||||||    
T  53789453 gtttccaaaagttctctcaa--agtctcacaaaacttatgtcagtagata 53789406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 153 - 277
Target Start/End: Complemental strand, 24085398 - 24085274
Alignment:
Q  153 ttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttttcgaaaagagtctcataa 252  Q
    |||| ||||||||||| |||||||| ||||  |||||||||||  || |||||| |||  ||||||||||||||||||||| || |||  ||||||| ||    
T  24085398 ttttgtaagctatcttggagaacttgtgaaaataagctgaaaacagcgtatgaacagtaccataagctgttttcataagttctccaaaccagtctcacaa 24085299  T
Q  253 aacttatgccagtagataagctcaa 277  Q
    |||||||||| ||||||||||||||    
T  24085298 aacttatgccggtagataagctcaa 24085274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 123 - 277
Target Start/End: Original strand, 584025 - 584180
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtg-gttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 221  Q
    |||||||||||||||   ||||||||||  |||| ||||||||||||  |||||||||||| ||||||| ||| |  | |||||||| || | |||||||    
T  584025 ttaaattgtttttgttcatgctataagttagtttcataagctatcttgaagaacttatgaaattaagcttaaagaaacctatgaaaactgccgtaagctg 584124  T
Q  222 ttttcataagttttcgaaaagagtctcataaaacttatgccagtagataagctcaa 277  Q
    ||||||||| || || |||| ||||||| | ||||||||| |||||||||||||||    
T  584125 ttttcataaattctccaaaacagtctcacagaacttatgctagtagataagctcaa 584180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 123 - 277
Target Start/End: Original strand, 21367646 - 21367801
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 221  Q
    |||||||||||| ||||    ||||||| ||||| |||||||||||| |||||||||||||  |||||||||||  |||| |||| | ||||||||||||    
T  21367646 ttaaattgttttcgtataatgtataagttgttttcataagctatcttggagaacttatgaaaataagctgaaaacagcttgtgaacaatgtcataagctg 21367745  T
Q  222 ttttcataagttttcgaaaagagtctcataaaacttatgccagtagataagctcaa 277  Q
    |||||||||||| ||  ||| |||| || |||||||||||  |||||||| |||||    
T  21367746 ttttcataagttctcccaaacagtcccacaaaacttatgctggtagataatctcaa 21367801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 190 - 277
Target Start/End: Complemental strand, 31365211 - 31365124
Alignment:
Q  190 tgaaaaaggcttatgaaaagtgtcataagctgttttcataagttttcgaaaagagtctcataaaacttatgccagtagataagctcaa 277  Q
    ||||||| ||||||||||| |||||||||||| ||||||||||| ||  ||| ||||||| ||||||||||||| |||||||||||||    
T  31365211 tgaaaaaagcttatgaaaattgtcataagctgctttcataagttctcccaaacagtctcacaaaacttatgccaatagataagctcaa 31365124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 123 - 233
Target Start/End: Complemental strand, 36631142 - 36631031
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 221  Q
    ||||||||||||||||  |||||||||| ||||| || |||||| || |||||||||||||  ||||| |||||| |||| ||||||  |||||||||||    
T  36631142 ttaaattgtttttgtacatgctataagttgtttttatgagctatattggagaacttatgaaaataagcagaaaaaagcttttgaaaatcgtcataagctg 36631043  T
Q  222 ttttcataagtt 233  Q
     |||||||||||    
T  36631042 gtttcataagtt 36631031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 157 - 277
Target Start/End: Complemental strand, 3845618 - 3845499
Alignment:
Q  157 ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttttcgaaaagagtctcataaaact 256  Q
    ||||| |||||| |||||||||||||  |||||||||||| | |||| |||| |||||||| |||| |||| | ||| |   ||| ||||||| ||||||    
T  3845618 ataagttatcttggagaacttatgaaaataagctgaaaaaagattataaaaa-tgtcataatctgtcttcagatgttctatcaaacagtctcacaaaact 3845520  T
Q  257 tatgccagtagataagctcaa 277  Q
    |||||||||||||||||||||    
T  3845519 tatgccagtagataagctcaa 3845499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 157 - 277
Target Start/End: Original strand, 46031004 - 46031124
Alignment:
Q  157 ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttttcgaaaagagtctcataaaact 256  Q
    |||| ||||||| |||||||||| ||  |||||||||||  ||||||||| | ||||||| ||||||||| |||||| ||  ||| ||||||||||||||    
T  46031004 ataaactatcttggagaacttattaaaataagctgaaaacagcttatgaataatgtcataggctgttttcgtaagttctctgaaacagtctcataaaact 46031103  T
Q  257 tatgccagtagataagctcaa 277  Q
    |||  || ||||||| |||||    
T  46031104 tataacaatagataaactcaa 46031124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 123 - 229
Target Start/End: Complemental strand, 402633 - 402526
Alignment:
Q  123 ttaaattgtttttgtatttgctataag-tggttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 221  Q
    |||||||||||| ||||  | |||||| || |||||||| |||||||  ||||||| |||| ||||||||||||  ||||||||| | ||||||||||||    
T  402633 ttaaattgttttcgtataagttataagctgtttttataatctatcttgaagaacttgtgaaattaagctgaaaacagcttatgaacaatgtcataagctg 402534  T
Q  222 ttttcata 229  Q
    ||||||||    
T  402533 ttttcata 402526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 153 - 236
Target Start/End: Original strand, 901934 - 902017
Alignment:
Q  153 ttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttttc 236  Q
    ||||||||||||| || |||||||||||||  |||| ||||||| ||||||| ||| ||| || ||||||||||||||||||||    
T  901934 ttttataagctatattggagaacttatgaaaataagttgaaaaaagcttatggaaaatgttattagctgttttcataagttttc 902017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 123 - 277
Target Start/End: Complemental strand, 46778281 - 46778127
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 221  Q
    ||||||||||||||| | ||||||||   ||||| |||| ||||||| || |||||||||| | |||||||| ||  |||||||||| ||||||||| ||    
T  46778281 ttaaattgtttttgtttatgctataaactgttttcataaactatcttggacaacttatgaaat-aagctgaacaaaacttatgaaaaatgtcataagttg 46778183  T
Q  222 ttttcataagttttcgaaaagagtctcataaaacttatgccagtagataagctcaa 277  Q
    |||||||||||| ||  |||  || ||| |||| |||||||| || ||||||||||    
T  46778182 ttttcataagttctcccaaacggtttcacaaaatttatgccactaaataagctcaa 46778127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 157 - 277
Target Start/End: Complemental strand, 34610862 - 34610742
Alignment:
Q  157 ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttttcgaaaagagtctcataaaact 256  Q
    |||||||||||| | |||||||||||  | |||||||||   |||||||| | |||||||||| ||||||||||||| ||  ||| |||   | ||||||    
T  34610862 ataagctatcttggcgaacttatgaaaatcagctgaaaaccacttatgaacaatgtcataagcagttttcataagttctcccaaatagttgtacaaaact 34610763  T
Q  257 tatgccagtagataagctcaa 277  Q
    |||| ||||||||||||||||    
T  34610762 tatgtcagtagataagctcaa 34610742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 123 - 233
Target Start/End: Original strand, 20170502 - 20170613
Alignment:
Q  123 ttaaattgtttttgtatttgctataag-tggttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 221  Q
    ||||||||||||||||| ||||||||| || ||||| ||| ||| || ||||||| |||||  |||| ||||||| ||||||||||| |  ||| |||||    
T  20170502 ttaaattgtttttgtatatgctataagttgtttttacaagttatttttgagaactaatgaaaataagttgaaaaaagcttatgaaaaatcccattagctg 20170601  T
Q  222 ttttcataagtt 233  Q
    ||||| ||||||    
T  20170602 ttttcttaagtt 20170613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 123 - 271
Target Start/End: Original strand, 20257514 - 20257664
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggttttat-aagctatcttagagaacttatg-aatttaagctgaaaaaggcttatgaaaagtgtcataagct 220  Q
    ||||||||||||||||| |||||||||| ||||| | ||||||| || |||| |||||| ||  |||| |  ||||  |||||||||| |||||| ||||    
T  20257514 ttaaattgtttttgtatatgctataagttgttttttgaagctatattggagagcttatgaaaaataagttttaaaaaacttatgaaaattgtcattagct 20257613  T
Q  221 gttttcataagttttcgaaaagagtctcataaaacttatgccagtagataa 271  Q
    | ||||||||||| ||  ||| ||||||| |||| ||||| | ||||||||    
T  20257614 gctttcataagttctcccaaacagtctcacaaaatttatggctgtagataa 20257664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 143 - 275
Target Start/End: Original strand, 22203429 - 22203561
Alignment:
Q  143 ctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttttcgaaaa 241  Q
    |||||||| ||||| |||||||||||| |||||||||||||  ||| ||| |  | ||||| | ||| |||||||||||||||||||||||| ||  |||    
T  22203429 ctataagttgttttcataagctatcttggagaacttatgaaaataaactgcattaagcttaagtaaaatgtcataagctgttttcataagttctc-caaa 22203527  T
Q  242 gagtctcataaaacttatgccagtagataagctc 275  Q
     ||||||| |||| | ||| | ||||||||||||    
T  22203528 cagtctcacaaaattaatgtcggtagataagctc 22203561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 123 - 277
Target Start/End: Complemental strand, 31365391 - 31365245
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgt 222  Q
    ||||||||||||||||| |||||||||| ||||        || || ||||| |||||||  | || ||||||||  ||||||||| |||||||||||||    
T  31365391 ttaaattgtttttgtatatgctataagttgttt--------atattggagaatttatgaaaatgagttgaaaaagatttatgaaaattgtcataagctgt 31365300  T
Q  223 tttcataagttttcgaaaagagtctcataaaacttatgccagtagataagctcaa 277  Q
     |||||||||| ||  ||| ||| ||| |||| |||||||| ||||||| |||||    
T  31365299 attcataagttctcccaaacagtgtcacaaaaattatgccaatagataaactcaa 31365245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 123 - 215
Target Start/End: Complemental strand, 35959547 - 35959454
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggttt-tataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcat 215  Q
    ||||||| ||||||||| |||| ||||| |||| |||||||||| |||||||| || ||||  |||||||||||| |||| |||||| ||||||    
T  35959547 ttaaattatttttgtatatgctgtaagttgtttctataagctatattagagaatttttgaaaataagctgaaaaaagcttttgaaaattgtcat 35959454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 185 - 276
Target Start/End: Original strand, 49556900 - 49556997
Alignment:
Q  185 taagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttttc-gaa-----aagagtctcataaaacttatgccagtagataagctca 276  Q
    |||| ||||||| ||||||||||| ||||||||||||||||||||| || || |||     |||||||||| ||||||||||||| | ||||||||||    
T  49556900 taagttgaaaaaagcttatgaaaattgtcataagctgttttcataaattctctgaaagactaagagtctcacaaaacttatgccacttgataagctca 49556997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 141 - 221
Target Start/End: Original strand, 46478684 - 46478767
Alignment:
Q  141 tgctataagt-ggttttataagctatct--tagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 221  Q
    |||||||||| ||||||||||||||| |  | |||||||||||||  |||| ||||||| ||||||||||| ||||||||||||    
T  46478684 tgctataagttggttttataagctatatattggagaacttatgaaaataagttgaaaaaagcttatgaaaactgtcataagctg 46478767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 123 - 277
Target Start/End: Complemental strand, 13715665 - 13715508
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggtttt---ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagc 219  Q
    |||| ||| |||||||| || ||||||| |||||   |||||| || || || ||||||||||  |||| ||||||| ||||||||||  ||||||||||    
T  13715665 ttaatttgattttgtatatgatataagttgtttttatataagcgatattggacaacttatgaaaataagttgaaaaatgcttatgaaagttgtcataagc 13715566  T
Q  220 tgttttcataagttttcgaaaagagtctcataaaacttatgccagtagataagctcaa 277  Q
    ||||||   ||||| |   ||| ||||||| ||||| ||||| |||||||||| ||||    
T  13715565 tgttttaggaagttctaccaaacagtctcacaaaacatatgctagtagataagatcaa 13715508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 203 - 270
Target Start/End: Original strand, 34034158 - 34034225
Alignment:
Q  203 tgaaaagtgtcataagctgttttcataagttttcgaaaagagtctcataaaacttatgccagtagata 270  Q
    |||||| |||| ||||||||||||||||||| ||  ||||||||||| ||||| | ||||||||||||    
T  34034158 tgaaaactgtcctaagctgttttcataagttctcctaaagagtctcacaaaacgtgtgccagtagata 34034225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 122 - 203
Target Start/End: Original strand, 47132309 - 47132391
Alignment:
Q  122 attaaattgtttttgtatttgctataag-tggttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttat 203  Q
    |||||||||||||||||| ||||||| | || ||||||||||||| || ||||| |||||||  |||| ||||||| ||||||    
T  47132309 attaaattgtttttgtatatgctataggttgtttttataagctatattggagaagttatgaaaataagttgaaaaaagcttat 47132391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 125 - 233
Target Start/End: Original strand, 37689212 - 37689319
Alignment:
Q  125 aaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgtt 223  Q
    ||||||||||||||| ||||||| || ||||| || || ||| | |||| |||||||||  |||| ||||||| |||| |||||| ||||||||||||||    
T  37689212 aaattgtttttgtatatgctataggttgtttttatgag-tatatcagagcacttatgaaaataagttgaaaaaagctt-tgaaaattgtcataagctgtt 37689309  T
Q  224 ttcataagtt 233  Q
    ||| ||||||    
T  37689310 ttcttaagtt 37689319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 424 - 492
Target Start/End: Complemental strand, 46407974 - 46407905
Alignment:
Q  424 ataaaataaagtcaaactgtttt-ataagctattgtgaagactttatgaaaataagctaaaaacaactta 492  Q
    ||||| |||||| |||||||||| |||||||||||||| ||  || ||||||||||||| ||||||||||    
T  46407974 ataaagtaaagttaaactgttttcataagctattgtgatgagcttgtgaaaataagctagaaacaactta 46407905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 123 - 226
Target Start/End: Original strand, 4401026 - 4401127
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgt 222  Q
    ||||||| |||| |||| |||||||||| ||||||  || ||| || |||||||||||||  |||| | ||||  ||||||| ||| |||||||||||||    
T  4401026 ttaaattattttcgtatatgctataagttgtttta--agttatattggagaacttatgaaaataagttaaaaacagcttatggaaattgtcataagctgt 4401123  T
Q  223 tttc 226  Q
    ||||    
T  4401124 tttc 4401127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 157 - 277
Target Start/End: Complemental strand, 39602266 - 39602147
Alignment:
Q  157 ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttttcgaaaagagtctcataaaact 256  Q
    |||||||||||| |||||||||||||  |||| ||||||    ||||||| | ||||||||||||| |||||||| | |   ||| || |||| ||||||    
T  39602266 ataagctatctttgagaacttatgaaaataagttgaaaacaatttatgaaca-tgtcataagctgtcttcataagctcttccaaatagcctcacaaaact 39602168  T
Q  257 tatgccagtagataagctcaa 277  Q
     |||||||||| |||||||||    
T  39602167 gatgccagtagctaagctcaa 39602147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 123 - 190
Target Start/End: Complemental strand, 44061114 - 44061046
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagct 190  Q
    ||||||||||||| |||  ||||||||| ||||| ||| | |||||||||||||||||||| |||||||    
T  44061114 ttaaattgtttttctataagctataagttgttttcatatgatatcttagagaacttatgaaattaagct 44061046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 157 - 233
Target Start/End: Original strand, 45541585 - 45541660
Alignment:
Q  157 ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagtt 233  Q
    |||||||||||| || |||||||||   ||| |||||||  ||||||||| | ||||||||||||||||||||||||    
T  45541585 ataagctatcttggataacttatgagaataacctgaaaacagcttatgaaca-tgtcataagctgttttcataagtt 45541660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 210 - 277
Target Start/End: Complemental strand, 24684825 - 24684758
Alignment:
Q  210 tgtcataagctgttttcataagttttcgaaaagagtctcataaaacttatgccagtagataagctcaa 277  Q
    ||||||||| ||||||||||||||     |||  |||||| |||||||||||||||||||||||||||    
T  24684825 tgtcataagttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaa 24684758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 156 - 227
Target Start/End: Complemental strand, 28795910 - 28795839
Alignment:
Q  156 tataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttca 227  Q
    |||||||||| ||||||||||||||||  |||||||||||  ||||| ||||| ||||| || | |||||||    
T  28795910 tataagctatattagagaacttatgaaaataagctgaaaagagcttaagaaaattgtcaaaaaccgttttca 28795839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 156 - 271
Target Start/End: Original strand, 37389196 - 37389311
Alignment:
Q  156 tataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttttcgaaaagagtctcataaaac 255  Q
    ||||||||||||| ||| ||||||||   |||||| |||   || | |||| | ||||||||| |||||||||||||| ||   |||||||||| |||||    
T  37389196 tataagctatcttggagtacttatgagaataagctaaaagcagcatttgaacaatgtcataagttgttttcataagttctcccgaagagtctcacaaaac 37389295  T
Q  256 ttatgccagtagataa 271  Q
    ||||| | ||||||||    
T  37389296 ttatgtctgtagataa 37389311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 123 - 277
Target Start/End: Complemental strand, 46886783 - 46886628
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 221  Q
    ||||||| |||||||||  ||||||||  ||||| |||||||||||| |||||||| ||||  ||| ||||| |   |||| ||| | || |||||||||    
T  46886783 ttaaattatttttgtatgagctataagctgttttcataagctatcttggagaacttttgaaaataacctgaacataacttacgaacaatgccataagctg 46886684  T
Q  222 ttttcataagttttcgaaaagagtctcataaaacttatgccagtagataagctcaa 277  Q
    ||||||| || |  |  ||| ||||||  |||| ||||||||| ||||||||||||    
T  46886683 ttttcatcagctcacccaaacagtctctcaaaatttatgccagcagataagctcaa 46886628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 277
Target Start/End: Complemental strand, 51929380 - 51929293
Alignment:
Q  190 tgaaaaaggcttatgaaaagtgtcataagctgttttcataagttttcgaaaagagtctcataaaacttatgccagtagataagctcaa 277  Q
    ||||||| || |||||||| |||||||| ||||||||| || || ||  ||| ||| ||| |||||||||||||||| ||||| ||||    
T  51929380 tgaaaaaagcctatgaaaattgtcataatctgttttcagaaattctctcaaatagtatcacaaaacttatgccagtaaataaggtcaa 51929293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 157 - 275
Target Start/End: Original strand, 466207 - 466325
Alignment:
Q  157 ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttttcgaaaagagtctcataaaact 256  Q
    ||||||||| || |||||||||||||  |||||| ||||| ||||| ||||| ||| | ||||||||||  |||||| ||  ||| ||||||| ||||      
T  466207 ataagctatgttggagaacttatgaaaataagctaaaaaaagcttaagaaaaatgttaaaagctgtttttgtaagttatcccaaacagtctcacaaaatc 466306  T
Q  257 tatgccagtagataagctc 275  Q
    |||| |||| | |||||||    
T  466307 tatgtcagtggttaagctc 466325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 171 - 277
Target Start/End: Complemental strand, 9832797 - 9832691
Alignment:
Q  171 agaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttttcgaaaagagtctcataaaacttatgccagtagata 270  Q
    ||||||||| ||| |||| ||||||| | |||||||||  | ||||||||||||||| ||||| ||  ||| ||| | | |||||||||| || || |||    
T  9832797 agaacttataaatataagttgaaaaaagtttatgaaaaaaggcataagctgttttcaaaagttctcccaaacagtttgacaaaacttatgtcaataaata 9832698  T
Q  271 agctcaa 277  Q
    |||||||    
T  9832697 agctcaa 9832691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 123 - 180
Target Start/End: Complemental strand, 30956717 - 30956659
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatg 180  Q
    |||||||||||||||||  ||||||||| ||||| | |||||||||| |||||||||||    
T  30956717 ttaaattgtttttgtataggctataagttgttttcaaaagctatcttggagaacttatg 30956659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 123 - 180
Target Start/End: Complemental strand, 30972529 - 30972471
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatg 180  Q
    |||||||||||||||||  ||||||||| ||||| | |||||||||| |||||||||||    
T  30972529 ttaaattgtttttgtataggctataagttgttttcaaaagctatcttggagaacttatg 30972471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 157 - 195
Target Start/End: Complemental strand, 33883806 - 33883768
Alignment:
Q  157 ataagctatcttagagaacttatgaatttaagctgaaaa 195  Q
    ||||||||||||||||||||||||||  |||||||||||    
T  33883806 ataagctatcttagagaacttatgaaaataagctgaaaa 33883768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 172 - 236
Target Start/End: Original strand, 944591 - 944655
Alignment:
Q  172 gaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttttc 236  Q
    |||| ||||||  |||| ||||||| | ||||| ||| ||||||||||| |||||||||||||||    
T  944591 gaacatatgaaagtaagttgaaaaaagattatggaaattgtcataagctattttcataagttttc 944655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 185 - 229
Target Start/End: Original strand, 26911627 - 26911671
Alignment:
Q  185 taagctgaaaaaggcttatgaaaagtgtcataagctgttttcata 229  Q
    |||| |||||||  |||||||||| ||||||||||||||||||||    
T  26911627 taagttgaaaaaaacttatgaaaattgtcataagctgttttcata 26911671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 222 - 277
Target Start/End: Original strand, 47132397 - 47132450
Alignment:
Q  222 ttttcataagttttcgaaaagagtctcataaaacttatgccagtagataagctcaa 277  Q
    |||||||||||| || |||| ||||||| ||||||  |||||||||||||||||||    
T  47132397 ttttcataagttctccaaaacagtctcacaaaact--tgccagtagataagctcaa 47132450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 68; Significance: 4e-30; HSPs: 56)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 123 - 277
Target Start/End: Original strand, 41851514 - 41851669
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 221  Q
    ||||||||||||||||| |||||||||| ||||| | |||||||||| ||||| ||||||| ||||||||| ||| ||||||||||||||||||||| ||    
T  41851514 ttaaattgtttttgtatatgctataagttgttttcagaagctatcttggagaatttatgaaattaagctgagaaaagcttatgaaaagtgtcataagttg 41851613  T
Q  222 ttttcataagttttcgaaaagagtctcataaaacttatgccagtagataagctcaa 277  Q
    ||| ||||| || ||  ||  ||||||| ||||||| || || |||||||||||||    
T  41851614 tttccataaattctcccaatcagtctcacaaaacttttgtcaatagataagctcaa 41851669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 123 - 277
Target Start/End: Complemental strand, 15757750 - 15757594
Alignment:
Q  123 ttaaattgttttt-gtatttgctataagtggt-tttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagct 220  Q
    ||||||||||||| |||| |||||||||| || ||||||||||||   ||||||| ||||||  |||||||||||| |||| |||||| ||||||||||     
T  15757750 ttaaattgttttttgtatatgctataagttgtatttataagctatacaagagaacgtatgaaaataagctgaaaaaagcttctgaaaattgtcataagca 15757651  T
Q  221 gttttcataagttttcgaaaagagtctcataaaacttatgccagtagataagctcaa 277  Q
    |||||||||| || ||  ||  ||||||| |||||||||||||||| ||||||||||    
T  15757650 gttttcataaattctcccaagcagtctcacaaaacttatgccagtaaataagctcaa 15757594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 125 - 274
Target Start/End: Complemental strand, 43279616 - 43279466
Alignment:
Q  125 aaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgtt 223  Q
    |||||||||||||||  ||||||||| ||||| ||||||||| || |||||||| ||||  |||| ||||||| ||||||||||| ||||||||||||||    
T  43279616 aaattgtttttgtat--gctataagttgtttttataagctatattggagaacttgtgaaaataagttgaaaaaagcttatgaaaattgtcataagctgtt 43279519  T
Q  224 ttcataagt--tttcgaaaagagtctcataaaacttatgccagtagataagct 274  Q
    ||||||| |  | ||  ||| ||||||| ||||||||||| ||||||||||||    
T  43279518 ttcataaattctctcccaaacagtctcacaaaacttatgctagtagataagct 43279466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 123 - 277
Target Start/End: Original strand, 45229491 - 45229645
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgt 222  Q
    ||||||||||||||||| || ||| | || ||| |||||||||||| |||||||||||||  |||||||||||| ||| ||||||| ||||||||| | |    
T  45229491 ttaaattgtttttgtatatgttatcattgttttcataagctatcttcgagaacttatgaaaataagctgaaaaaagctaatgaaaaatgtcataaggtct 45229590  T
Q  223 tttcataagttttcgaaaagagtctcataaaacttatgccagtagataagctcaa 277  Q
    ||||||||||| ||  |||  || |   | |||||||||||||||||||||||||    
T  45229591 tttcataagttctcccaaacggtgtggcataacttatgccagtagataagctcaa 45229645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 123 - 274
Target Start/End: Original strand, 18066107 - 18066259
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 221  Q
    ||||||||||||  |||  ||||||||  ||||| |||||||||||| ||||||||| |||  |||| ||||||  ||||||||  | ||||||||||||    
T  18066107 ttaaattgttttcatataagctataagctgttttcataagctatcttggagaacttaagaaaataaggtgaaaatagcttatgagcaatgtcataagctg 18066206  T
Q  222 ttttcataagttttcgaaaagagtctcataaaacttatgccagtagataagct 274  Q
    |||||||||||| |  |||| ||| ||| |||||||||| |||||||||||||    
T  18066207 ttttcataagttgtacaaaacagtttcacaaaacttatgtcagtagataagct 18066259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 141 - 277
Target Start/End: Original strand, 26202025 - 26202162
Alignment:
Q  141 tgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttttcgaa 239  Q
    |||||||||| ||||| ||||| ||| || |||||||||||||  |||| ||||||| ||||||||||| ||||||||| |||| |||||| || | | |    
T  26202025 tgctataagttgtttttataagatatattggagaacttatgaaaataagttgaaaaaagcttatgaaaattgtcataagttgttctcataaattctagca 26202124  T
Q  240 aagagtctcataaaacttatgccagtagataagctcaa 277  Q
    |||| ||||| |||||||||| ||| ||||||| ||||    
T  26202125 aagaatctcacaaaacttatgtcagcagataagttcaa 26202162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 131 - 277
Target Start/End: Original strand, 20952342 - 20952489
Alignment:
Q  131 tttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcata 229  Q
    ||||| ||| |||||||||| ||||| || |||||| || |||||||||||||  |||| ||||||| | | ||||||| || ||||| |||||||||||    
T  20952342 tttttttatatgctataagttgtttttattagctatattggagaacttatgaaaataagttgaaaaaagttaatgaaaattggcataaactgttttcata 20952441  T
Q  230 agttttcgaaaagagtctcataaaacttatgccagtagataagctcaa 277  Q
    |||| ||  ||| ||||| | ||||||| |||||||| ||||||||||    
T  20952442 agttctcttaaatagtctaacaaaacttttgccagtatataagctcaa 20952489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 123 - 277
Target Start/End: Complemental strand, 39659600 - 39659445
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 221  Q
    ||||||||||||||| | || ||||| | ||||| ||||||||| ||||||||||||||||  |||| ||| ||| |||||  |||  ||||||||||||    
T  39659600 ttaaattgtttttgtctatgttataacttgtttttataagctatattagagaacttatgaagataaggtgacaaaagcttagaaaatttgtcataagctg 39659501  T
Q  222 ttttcataagttttcgaaaagagtctcataaaacttatgccagtagataagctcaa 277  Q
    ||||| |||||| ||  | | || ||||  ||||||||| ||||||||||||||||    
T  39659500 ttttcgtaagttctctcagacagcctcacgaaacttatgtcagtagataagctcaa 39659445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 161 - 235
Target Start/End: Original strand, 33981140 - 33981214
Alignment:
Q  161 gctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagtttt 235  Q
    |||||||| ||||| ||||||| ||||| ||||||| |||||||||| ||||||||||| |||||||||||||||    
T  33981140 gctatcttggagaatttatgaaattaagttgaaaaaagcttatgaaatgtgtcataagccgttttcataagtttt 33981214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 123 - 233
Target Start/End: Complemental strand, 41812181 - 41812072
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgt 222  Q
    ||||||||||||||||| ||||| |||  |||| | |||||||||| || |||||| ||| | ||| ||||||| ||||||||||| |||||||||||||    
T  41812181 ttaaattgtttttgtatatgctacaagatgtttcaaaagctatcttggaaaacttaggaaat-aagttgaaaaaagcttatgaaaaatgtcataagctgt 41812083  T
Q  223 tttcataagtt 233  Q
    ||||| |||||    
T  41812082 tttcaaaagtt 41812072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 173 - 277
Target Start/End: Original strand, 449877 - 449981
Alignment:
Q  173 aacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttttcgaaaagagtctcataaaacttatgccagtagataag 272  Q
    ||||||| || ||||| | ||||  ||||||||||| |||||||||||||||||| ||||  ||  ||| | ||||||||||||||||| ||||||||||    
T  449877 aacttatcaaattaagttaaaaatagcttatgaaaaatgtcataagctgttttcaaaagtcctcccaaacaatctcataaaacttatgctagtagataag 449976  T
Q  273 ctcaa 277  Q
    |||||    
T  449977 ctcaa 449981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 123 - 274
Target Start/End: Original strand, 32592566 - 32592717
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 221  Q
    |||||||||||| ||||  ||||||||| ||||| |||||| || || |||||||||||||  |||| ||| ||| ||||||||||| |||| ||||||     
T  32592566 ttaaattgtttt-gtatacgctataagttgtttttataagcaatattggagaacttatgaaaataagttgagaaaagcttatgaaaattgtcgtaagcta 32592664  T
Q  222 ttttcataagttttcgaaaagagtctcataaaacttatgccagtagataagct 274  Q
    |||||||||||| ||  ||| || |||  |||||||||||||  |||||||||    
T  32592665 ttttcataagttctcccaaatagactcccaaaacttatgccatcagataagct 32592717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 123 - 277
Target Start/End: Original strand, 1625879 - 1626034
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 221  Q
    |||||||||||| ||||  | ||||||| ||||| |||||||||||| ||||||||| |||  | |||||||||   |||||||| | |||||||||||     
T  1625879 ttaaattgttttcgtataagttataagttgttttcataagctatcttggagaacttacgaaaatcagctgaaaacatcttatgaacattgtcataagcta 1625978  T
Q  222 ttttcataagttttcgaaaagagtctcataaaacttatgccagtagataagctcaa 277  Q
     ||||||||||| ||  ||| ||||| | |||||||||| |||  |||||||||||    
T  1625979 ctttcataagttctctcaaatagtcttacaaaacttatgtcaggggataagctcaa 1626034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 123 - 277
Target Start/End: Complemental strand, 41241223 - 41241069
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 221  Q
    ||||||||||||||||| |||||||||| |||||  |||| |||||| || ||||| |||| ||||||||||||| ||||||| |||| || ||||  ||    
T  41241223 ttaaattgtttttgtatatgctataagtagttttcctaagttatcttggaaaacttgtgaaattaagctgaaaaaagcttatggaaag-gttataatttg 41241125  T
Q  222 ttttcataagttttcgaaaagagtctcataaaacttatgccagtagataagctcaa 277  Q
    |||||| ||||| |   ||| | ||||| |||||| |||| |||| ||||||||||    
T  41241124 ttttcacaagttctaccaaacaatctcacaaaactcatgcgagtaaataagctcaa 41241069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 152 - 277
Target Start/End: Original strand, 750679 - 750804
Alignment:
Q  152 gttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttttcgaaaagagtctcata 251  Q
    |||| |||||||||||| ||||||||||| |  |||||| ||||  ||||||||| | |||||| |||| |||||||||||| | | ||| | ||||| |    
T  750679 gtttcataagctatcttggagaacttatgcaaataagctcaaaacagcttatgaacaatgtcattagctcttttcataagttcttgcaaacactctcaca 750778  T
Q  252 aaacttatgccagtagataagctcaa 277  Q
    |||| |||||||| |||||| |||||    
T  750779 aaacatatgccaggagataaactcaa 750804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 123 - 270
Target Start/End: Complemental strand, 12464564 - 12464416
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 221  Q
    ||||||||||||||||| |||||||||   |||| |||||||||||| |||||||| ||||  |||||||||||| |||| |||||  |||| ||||||     
T  12464564 ttaaattgtttttgtatatgctataagctattttcataagctatcttggagaacttgtgaaaataagctgaaaaaagcttgtgaaatatgtcgtaagctt 12464465  T
Q  222 ttttcataagttttcgaaaagagtctcataaaacttatgccagtagata 270  Q
    ||||  |||| | ||  ||| | ||||| ||||||||||  ||||||||    
T  12464464 tttttgtaagatgtcccaaacattctcacaaaacttatgttagtagata 12464416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 185 - 277
Target Start/End: Complemental strand, 19608661 - 19608569
Alignment:
Q  185 taagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttttcgaaaagagtctcataaaacttatgccagtagataagctcaa 277  Q
    |||||| ||||  ||||||||| | ||||||||||||| || ||||||| ||| ||| ||||||||||||| |||| |||||||||| |||||    
T  19608661 taagctcaaaatagcttatgaagaatgtcataagctgtgtttataagttctcgcaaacagtctcataaaacctatgtcagtagataaactcaa 19608569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 157 - 265
Target Start/End: Complemental strand, 41293219 - 41293111
Alignment:
Q  157 ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttttcgaaaagagtctcataaaact 256  Q
    |||||||||| | ||| |||||||||| |||||||||||  |||||||  || |||||||||||||||| ||||||| ||  ||| ||||||| ||||||    
T  41293219 ataagctatcctggagtacttatgaatataagctgaaaacagcttatgcgaaatgtcataagctgtttttataagttctcccaaatagtctcacaaaact 41293120  T
Q  257 tatgccagt 265  Q
     || |||||    
T  41293119 aataccagt 41293111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 153 - 260
Target Start/End: Complemental strand, 7035627 - 7035520
Alignment:
Q  153 ttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttttcgaaaagagtctcataa 252  Q
    |||||||| ||||||| || ||||||||||  ||||| |||||   ||||||||  |||||||||||||||| |||||||| |  |||| ||||||| ||    
T  7035627 ttttataaactatcttggaaaacttatgaaaataagcggaaaacaccttatgaactgtgtcataagctgtttccataagttcttcaaaacagtctcacaa 7035528  T
Q  253 aacttatg 260  Q
    ||||||||    
T  7035527 aacttatg 7035520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 126 - 230
Target Start/End: Complemental strand, 5745873 - 5745768
Alignment:
Q  126 aattgtttttgtatttgctataagtggttt-tataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttt 224  Q
    |||||||||| ||| ||||||||||  ||| |||||||||| || ||| ||||| |||  | || || |||| ||||||||||| |||||||||||||||    
T  5745873 aattgtttttttatatgctataagttatttctataagctatatttgaggacttaggaaaattagttggaaaaagcttatgaaaattgtcataagctgttt 5745774  T
Q  225 tcataa 230  Q
    ||||||    
T  5745773 tcataa 5745768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 137 - 277
Target Start/End: Original strand, 9174808 - 9174949
Alignment:
Q  137 tatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagtttt 235  Q
    ||||| |||||||  ||||| ||||||||||||| ||| ||||||||  |||||||||||  ||||||||| | ||||||||| |||||| | |||        
T  9174808 tatttactataagctgttttcataagctatcttacagagcttatgaaaataagctgaaaatagcttatgaacaatgtcataagttgttttaacaagcccc 9174907  T
Q  236 cgaaaagagtctcataaaacttatgccagtagataagctcaa 277  Q
    |  ||| ||||||| | ||||||||||| |||||||||||||    
T  9174908 ctcaaacagtctcacataacttatgccaatagataagctcaa 9174949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 123 - 277
Target Start/End: Complemental strand, 33319903 - 33319752
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 221  Q
    ||||| ||||||||||| | ||||||   ||||| |||| ||||||| |||||||||||||  |||||||||||| |||||| |||  |||||||||||     
T  33319903 ttaaactgtttttgtatatactataaactgttttcataaactatcttggagaacttatgaaaataagctgaaaaaagcttattaaa--tgtcataagcta 33319806  T
Q  222 ttttcataagttttcgaaaagagtctcataaaacttatgccagtagataagctcaa 277  Q
    |||  | ||||| ||  ||| ||||||  | |||||||||||||||| ||||||||    
T  33319805 tttataaaagttctcccaaacagtctc--acaacttatgccagtagacaagctcaa 33319752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 157 - 277
Target Start/End: Original strand, 4606939 - 4607059
Alignment:
Q  157 ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttttcgaaaagagtctcataaaact 256  Q
    |||||||||||| |||||||||||||  |||||| |||   ||| ||||| | ||||||||| |||||||| ||||| ||  ||| ||||||| ||||||    
T  4606939 ataagctatcttggagaacttatgaaaataagctaaaagcagctcatgaacaatgtcataagttgttttcacaagttctcccaaatagtctcacaaaact 4607038  T
Q  257 tatgccagtagataagctcaa 277  Q
    |||    ||||||||||||||    
T  4607039 tatattggtagataagctcaa 4607059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 169 - 277
Target Start/End: Original strand, 13325596 - 13325704
Alignment:
Q  169 agagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttttcgaaaagagtctcataaaacttatgccagtaga 268  Q
    ||||||||||||||  | |||||||||| |||||||  || |||||||||||||||||| ||||| ||   || | |||||||||||||||  || | ||    
T  13325596 agagaacttatgaaaatgagctgaaaaaagcttatgtgaaatgtcataagctgttttcaaaagttctcccgaacaatctcataaaacttatatcaattga 13325695  T
Q  269 taagctcaa 277  Q
    |||||||||    
T  13325696 taagctcaa 13325704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 213 - 277
Target Start/End: Original strand, 27317449 - 27317513
Alignment:
Q  213 cataagctgttttcataagttttcgaaaagagtctcataaaacttatgccagtagataagctcaa 277  Q
    |||||| |||||||||||||| ||  ||| |||||||||||||||||| | ||||||||||||||    
T  27317449 cataagttgttttcataagttctctcaaacagtctcataaaacttatgtcggtagataagctcaa 27317513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 198 - 274
Target Start/End: Original strand, 30331806 - 30331882
Alignment:
Q  198 gcttatgaaaagtgtcataagctgttttcataagttttcgaaaagagtctcataaaacttatgccagtagataagct 274  Q
    |||| |||||| ||||||||| | |||||||||||| ||  ||| ||||||| |||||||||| |||||||||||||    
T  30331806 gcttgtgaaaattgtcataaggttttttcataagttctcccaaacagtctcacaaaacttatgtcagtagataagct 30331882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 154 - 277
Target Start/End: Complemental strand, 10619279 - 10619156
Alignment:
Q  154 tttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttttcgaaaagagtctcataaa 253  Q
    |||||||||||  || ||| |||||||||  |||||||||||| |||   ||||| || |||||||||||||||| |||| ||  || | |||||| |||    
T  10619279 tttataagctagattggagtacttatgaaaataagctgaaaaatgctcgagaaaattgacataagctgttttcatgagttctcccaaggggtctcacaaa 10619180  T
Q  254 acttatgccagtagataagctcaa 277  Q
    |||| || |||||||||| |||||    
T  10619179 acttgtgtcagtagataaactcaa 10619156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 210 - 277
Target Start/End: Complemental strand, 42659214 - 42659147
Alignment:
Q  210 tgtcataagctgttttcataagttttcgaaaagagtctcataaaacttatgccagtagataagctcaa 277  Q
    |||||||||||||||||| || || ||  ||| ||||||| |||||||||||||||| ||||||||||    
T  42659214 tgtcataagctgttttcaaaacttctcccaaacagtctcacaaaacttatgccagtaaataagctcaa 42659147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 163 - 277
Target Start/End: Complemental strand, 31561792 - 31561678
Alignment:
Q  163 tatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttttcgaaaagagtctcataaaacttatgcc 262  Q
    |||||| |||||||||||||  |||||| ||| |  ||||||||||  |||||| |||||||||| ||||||||  ||| ||| | | ||||||||||      
T  31561792 tatcttggagaacttatgaaagtaagcttaaacaatcttatgaaaaacgtcatatgctgttttcaaaagttttcccaaacagttttacaaaacttatgtt 31561693  T
Q  263 agtagataagctcaa 277  Q
    ||||||||| |||||    
T  31561692 agtagataatctcaa 31561678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 203 - 277
Target Start/End: Original strand, 42419853 - 42419927
Alignment:
Q  203 tgaaaagtgtcataagctgttttcataagttttcgaaaagagtctcataaaacttatgccagtagataagctcaa 277  Q
    |||||| ||||||||||||||||| |||||| ||  ||| ||||||| |||||||||| ||| |||||| |||||    
T  42419853 tgaaaaatgtcataagctgttttcgtaagttctcccaaacagtctcaaaaaacttatgtcagaagataaactcaa 42419927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 161 - 277
Target Start/End: Complemental strand, 7928351 - 7928234
Alignment:
Q  161 gctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgt-cataagctgttttcataagttttcgaaaagagtctcataaaacttat 259  Q
    |||||||| |||||||||||||  |||||||||||   |||||||| | ||| ||||||||||||||| ||||| |    || ||||||| | |||||||    
T  7928351 gctatcttggagaacttatgaaaataagctgaaaacaacttatgaacaatgtccataagctgttttcaaaagttctttctaacagtctcacacaacttat 7928252  T
Q  260 gccagtagataagctcaa 277  Q
    | || |||||||||||||    
T  7928251 gtcaatagataagctcaa 7928234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 156 - 217
Target Start/End: Original strand, 20926516 - 20926577
Alignment:
Q  156 tataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataa 217  Q
    |||||||||| ||||||||||||||||  |||| ||||||| ||| ||||||| ||||||||    
T  20926516 tataagctatattagagaacttatgaaaataagttgaaaaaagctaatgaaaattgtcataa 20926577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 123 - 231
Target Start/End: Original strand, 40279176 - 40279285
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 221  Q
    |||||||||||| ||||  | ||||||| ||||| ||||||||| || |||||||||||||  | |||||||||  | ||||||| | || |||||| ||    
T  40279176 ttaaattgttttggtataagatataagttgttttcataagctatgttggagaacttatgaaaattagctgaaaatagtttatgaacaatgccataagttg 40279275  T
Q  222 ttttcataag 231  Q
    ||||||||||    
T  40279276 ttttcataag 40279285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 160 - 277
Target Start/End: Original strand, 43036574 - 43036690
Alignment:
Q  160 agctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttttcgaaaagagtctcataaaacttat 259  Q
    ||||||||| || ||||||||||  |||||| ||| ||  ||||||| | ||||||||| |||| ||||||||||||  ||| | ||||| |||||||||    
T  43036574 agctatcttggaaaacttatgaaagtaagctaaaacagt-ttatgaataatgtcataagatgttctcataagttttcccaaatactctcacaaaacttat 43036672  T
Q  260 gccagtagataagctcaa 277  Q
    |  | |||||||||||||    
T  43036673 gtaactagataagctcaa 43036690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 131 - 277
Target Start/End: Original strand, 2142640 - 2142788
Alignment:
Q  131 tttttgtatttgctataagtggtttt-ataagctatcttag-agaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcat 228  Q
    |||||||||  ||||||||| ||||| ||||  |||||| | |||| |||||||  |||||| ||||  ||| ||||| | ||||| ||  |||||||||    
T  2142640 tttttgtataagctataagttgttttcataatttatcttgggagaatttatgaaaataagctaaaaacagctaatgaacattgtcacaacttgttttcat 2142739  T
Q  229 aagttttcgaaaagagtctcataaaacttatgccagtagataagctcaa 277  Q
    ||||| ||  ||| |||||||||||||||||||  |||||||| |||||    
T  2142740 aagttctcccaaacagtctcataaaacttatgcatgtagataaactcaa 2142788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 277
Target Start/End: Original strand, 15305701 - 15305808
Alignment:
Q  170 gagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttttcgaaaagagtctcataaaacttatgccagtagat 269  Q
    |||||||||||||  |||| |||||||  |||||||||| || |||||| |||| ||| ||||| |   ||| ||| ||| |||||||||| || |||||    
T  15305701 gagaacttatgaaaataagttgaaaaaaacttatgaaaattgccataagttgttgtcaaaagttctaccaaacagtttcacaaaacttatgtcaatagat 15305800  T
Q  270 aagctcaa 277  Q
    ||||||||    
T  15305801 aagctcaa 15305808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 158 - 233
Target Start/End: Original strand, 16451133 - 16451208
Alignment:
Q  158 taagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagtt 233  Q
    ||||||||||| |||||||  ||||  |||||||||||  ||| ||||| | ||||||||| ||||||||||||||    
T  16451133 taagctatcttggagaactcgtgaaaataagctgaaaacagctcatgaacaatgtcataagttgttttcataagtt 16451208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 123 - 233
Target Start/End: Original strand, 26626852 - 26626963
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 221  Q
    |||||||||||| ||||  |||| |||  ||||| ||||||||||||  ||||||||||||  ||| |||||||  | ||||||| | |||||||||||     
T  26626852 ttaaattgttttcgtataagctagaagctgttttcataagctatcttgcagaacttatgaaaataacctgaaaacagattatgaacaatgtcataagcta 26626951  T
Q  222 ttttcataagtt 233  Q
    ||||| ||||||    
T  26626952 ttttcgtaagtt 26626963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 150 - 233
Target Start/End: Original strand, 33192209 - 33192291
Alignment:
Q  150 tggttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagtt 233  Q
    |||||| |||||||||| | |||| ||||| ||| |||||||||||  ||||||| | | |||||||| |||||||||||||||    
T  33192209 tggtttcataagctatcctggagagcttataaatataagctgaaaacagcttatggata-tgtcataaactgttttcataagtt 33192291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 171 - 225
Target Start/End: Original strand, 2227194 - 2227248
Alignment:
Q  171 agaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgtttt 225  Q
    |||||||| |||  |||||||||||| | ||||||||| ||||||||||||||||    
T  2227194 agaacttacgaaaataagctgaaaaatgtttatgaaaaatgtcataagctgtttt 2227248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 437 - 486
Target Start/End: Complemental strand, 3067446 - 3067396
Alignment:
Q  437 aaactgtttt-ataagctattgtgaagactttatgaaaataagctaaaaac 486  Q
    |||||||||| |||||||||  |||||| ||||||||||||||||||||||    
T  3067446 aaactgttttcataagctatcttgaagagtttatgaaaataagctaaaaac 3067396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 157 - 271
Target Start/End: Original strand, 42457962 - 42458076
Alignment:
Q  157 ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttttcgaaaagagtctcataaaact 256  Q
    ||||||||||||||||||| ||||||  |||||||||||   |||||  ||| |||  |||| |||||||||||  | ||  ||| | ||||| ||||||    
T  42457962 ataagctatcttagagaacatatgaaaataagctgaaaacaacttattgaaaatgttttaagttgttttcataaactctcctaaacactctcacaaaact 42458061  T
Q  257 tatgccagtagataa 271  Q
    |||||||||| ||||    
T  42458062 tatgccagtaaataa 42458076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 175 - 233
Target Start/End: Original strand, 43570446 - 43570503
Alignment:
Q  175 cttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagtt 233  Q
    ||||||||  |||||| |||||| |||||||| | ||||||||||||||||||||||||    
T  43570446 cttatgaaaataagctaaaaaag-cttatgaacaatgtcataagctgttttcataagtt 43570503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 156 - 233
Target Start/End: Original strand, 1647249 - 1647325
Alignment:
Q  156 tataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagtt 233  Q
    ||||||||||  |||||| |||||| |  |||||||||||  ||||||||  | ||||||||||||||||||||||||    
T  1647249 tataagctattatagagagcttatggaaataagctgaaaacagcttatgagca-tgtcataagctgttttcataagtt 1647325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 122 - 225
Target Start/End: Original strand, 12289774 - 12289879
Alignment:
Q  122 attaaattgtttttg-tatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagc 219  Q
    ||||||||||||||| ||  || ||||||| ||||| ||||  ||| || |||||||||||||  |||| ||||||| ||||||||| | |||||||| |    
T  12289774 attaaattgtttttggtacatgttataagttgtttttataatttatattggagaacttatgaaaataagttgaaaaaagcttatgaatattgtcataaac 12289873  T
Q  220 tgtttt 225  Q
    ||||||    
T  12289874 tgtttt 12289879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 158 - 271
Target Start/End: Complemental strand, 23974547 - 23974435
Alignment:
Q  158 taagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttttcgaaaagagtctcataaaactt 257  Q
    |||||||| || |||||||||||||  | |||  |||||  ||| |||||| |||||||||||||||||||||||| || |||| | |||||  || ||     
T  23974547 taagctatatttgagaacttatgaaaatgagccaaaaaaa-cttgtgaaaattgtcataagctgttttcataagttctccaaaacaatctcactaatctc 23974449  T
Q  258 atgccagtagataa 271  Q
    ||| ||||||||||    
T  23974448 atgtcagtagataa 23974435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 157 - 277
Target Start/End: Complemental strand, 26143696 - 26143578
Alignment:
Q  157 ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttttcgaaaagagtctcataaaact 256  Q
    |||||||| ||| |||||||||||||  |||||||||||   | | |||| | || |||||| ||||||| |||||| ||  ||| ||||||  |||| |    
T  26143696 ataagctaacttggagaacttatgaaaataagctgaaaataacctgtgaacaatgacataagttgttttcgtaagttctcccaaacagtctc--aaaatt 26143599  T
Q  257 tatgccagtagataagctcaa 277  Q
    |||| ||||||||||||||||    
T  26143598 tatgtcagtagataagctcaa 26143578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 156 - 277
Target Start/End: Original strand, 36534781 - 36534902
Alignment:
Q  156 tataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttttcgaaaagagtctcataaaac 255  Q
    |||||||||| |  ||||| | |||||  |||||||||||  | ||||||| | | | |||||||||||||||||||| ||  ||| ||||||| |||||    
T  36534781 tataagctatataggagaattaatgaaaataagctgaaaatagattatgaacaattttataagctgttttcataagttatcccaaacagtctcacaaaac 36534880  T
Q  256 ttatgccagtagataagctcaa 277  Q
    |||||  || | ||||||||||    
T  36534881 ttatgaaagcatataagctcaa 36534902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 192 - 277
Target Start/End: Complemental strand, 38916330 - 38916245
Alignment:
Q  192 aaaaaggcttatgaaaagtgtcataagctgttttcataagttttcgaaaagagtctcataaaacttatgccagtagataagctcaa 277  Q
    ||||| |||||||||||||| | |||||| |||||||||||| ||  ||| |  |||| ||||| |||||  ||||||||||||||    
T  38916330 aaaaaagcttatgaaaagtggcgtaagcttttttcataagttctcctaaacaacctcacaaaacctatgctggtagataagctcaa 38916245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 409 - 488
Target Start/End: Complemental strand, 3227778 - 3227698
Alignment:
Q  409 tttctacactaaaaaataaaataaagtcaaactgtttt-ataagctattgtgaagactttatgaaaataagctaaaaacaa 488  Q
    |||||| | |||||||||||| ||||| ||| |||||| |||||||||| || |||  || |||||||||||| |||||||    
T  3227778 tttctataataaaaaataaaacaaagttaaattgttttcataagctattttggagagattttgaaaataagctgaaaacaa 3227698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 209 - 277
Target Start/End: Complemental strand, 7033306 - 7033238
Alignment:
Q  209 gtgtcataagctgttttcataagttttcgaaaagagtctcataaaacttatgccagtagataagctcaa 277  Q
    |||||||||| |||||||||||||| |   ||| ||| ||||||||||||||  |||| ||||||||||    
T  7033306 gtgtcataagttgttttcataagttcttttaaacagtatcataaaacttatgttagtatataagctcaa 7033238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 469 - 501
Target Start/End: Complemental strand, 7103516 - 7103484
Alignment:
Q  469 tgaaaataagctaaaaacaacttagggatatgt 501  Q
    |||||||||||||||||||||||| ||||||||    
T  7103516 tgaaaataagctaaaaacaacttatggatatgt 7103484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 163 - 235
Target Start/End: Original strand, 36043924 - 36043996
Alignment:
Q  163 tatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagtttt 235  Q
    |||||| |||| |||||||| || |||| ||||  ||||||||| | |||| |||| ||||||||||||||||    
T  36043924 tatcttggagagcttatgaaattgagctaaaaacagcttatgaacaatgtcgtaagttgttttcataagtttt 36043996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 218
Target Start/End: Complemental strand, 39073780 - 39073684
Alignment:
Q  123 ttaaattgtttttgtatttgctataagt-ggttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataag 218  Q
    ||||||||||||||||| ||||||||||   ||||||||||||| || |||||||  ||||  |||| ||||  |  |||||||||| |||||||||    
T  39073780 ttaaattgtttttgtatatgctataagtaatttttataagctatattggagaactagtgaaaataagttgaacgaaacttatgaaaattgtcataag 39073684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 233
Target Start/End: Original strand, 41407280 - 41407392
Alignment:
Q  123 ttaaattgttttt-gtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagct 220  Q
    ||||||||||||| |||| ||||||||||  |||| ||||| | |||| |||||||| ||||  ||| || ||| | ||||||||||| || |||||||     
T  41407280 ttaaattgttttttgtatatgctataagttatttttataagttttctttgagaacttgtgaaaataaccttaaacaagcttatgaaaaatgccataagcc 41407379  T
Q  221 gttttcataagtt 233  Q
    ||||| |||||||    
T  41407380 gttttaataagtt 41407392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 437 - 492
Target Start/End: Complemental strand, 42817443 - 42817387
Alignment:
Q  437 aaactgtttt-ataagctattgtgaagactttatgaaaataagctaaaaacaactta 492  Q
    |||||||||| |||||||||| ||||||  ||||| || ||||||||||||||||||    
T  42817443 aaactgttttcataagctattctgaagagcttatggaagtaagctaaaaacaactta 42817387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 65; Significance: 3e-28; HSPs: 57)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 153 - 277
Target Start/End: Original strand, 2295106 - 2295230
Alignment:
Q  153 ttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttttcgaaaagagtctcataa 252  Q
    ||||||||||||| | ||||||||| ||||  |||| |||| |  ||||||||||| |||||||||||||||||||||||| ||  ||| ||||||| ||    
T  2295106 ttttataagctatatcagagaacttgtgaaaataagttgaatagagcttatgaaaattgtcataagctgttttcataagttctcccaaacagtctcacaa 2295205  T
Q  253 aacttatgccagtagataagctcaa 277  Q
    |||||||||||||||||||||||||    
T  2295206 aacttatgccagtagataagctcaa 2295230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 131 - 263
Target Start/End: Original strand, 49938734 - 49938867
Alignment:
Q  131 tttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcata 229  Q
    ||||||||| || ||||||| ||||| ||||||||| ||||||||||||||||  |||| ||||||| |||| |||||| ||||||||||||||||||||    
T  49938734 tttttgtatatgttataagttgtttttataagctatattagagaacttatgaaaataagttgaaaaaagcttttgaaaattgtcataagctgttttcata 49938833  T
Q  230 agttttcgaaaagagtctcataaaacttatgcca 263  Q
    |||| ||  ||| | ||||| |||||||||||||    
T  49938834 agttctcccaaacaatctcacaaaacttatgcca 49938867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 123 - 277
Target Start/End: Complemental strand, 3234106 - 3233951
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 221  Q
    ||||||||||||||||| |||||||||| ||||| ||||||||| || |||||||||||||  ||||  ||||||  |||||||||| ||| ||||| ||    
T  3234106 ttaaattgtttttgtatatgctataagttgtttttataagctatattggagaacttatgaaaataagtagaaaaaaacttatgaaaactgttataagttg 3234007  T
Q  222 ttttcataagttttcgaaaagagtctcataaaacttatgccagtagataagctcaa 277  Q
    |||||||||||| ||   || ||||||| |||||||| | || |||||||||||||    
T  3234006 ttttcataagttctccctaacagtctcacaaaacttacggcactagataagctcaa 3233951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 123 - 273
Target Start/End: Original strand, 13809977 - 13810128
Alignment:
Q  123 ttaaattgtttttgtatttgctata-agtggttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 221  Q
    ||||||||||||||||| ||||||| | || |||||||| |||| ||||||||||| ||||  |||||| | |||  ||| |||||| |||||||| |||    
T  13809977 ttaaattgtttttgtatatgctatatattgtttttataaactatattagagaacttgtgaaaataagctaagaaaaacttttgaaaattgtcataaactg 13810076  T
Q  222 ttttcataagttttcgaaaagagtctcataaaacttatgccagtagataagc 273  Q
    | |||||||||| || |||||||||||| |||||||| | ||||||||||||    
T  13810077 tattcataagttctctaaaagagtctcacaaaacttacgtcagtagataagc 13810128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 123 - 277
Target Start/End: Complemental strand, 14576744 - 14576590
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 221  Q
    ||||||||||||||||| |||||||| |  |||| ||||||||| ||||||||||| ||||  |||||||||||| |||| |||||| ||||||||||||    
T  14576744 ttaaattgtttttgtatatgctataatttttttttataagctatattagagaactt-tgaaaataagctgaaaaaagcttttgaaaattgtcataagctg 14576646  T
Q  222 ttttcataagttttcgaaaagagtctcataaaacttatgccagtagataagctcaa 277  Q
    |||||| ||||| ||  ||| |||  || |||| ||| ||||||||||||||||||    
T  14576645 ttttcacaagttgtcccaaacagtgccacaaaatttaagccagtagataagctcaa 14576590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 153 - 277
Target Start/End: Original strand, 29904761 - 29904885
Alignment:
Q  153 ttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttttcgaaaagagtctcataa 252  Q
    |||||||| |||| ||| ||||||||||||  |||| ||||||| |||| |||||| || ||||||||||||| ||||||| ||  ||| ||||||| ||    
T  29904761 ttttataaactatattatagaacttatgaaaataaggtgaaaaaagcttttgaaaattgccataagctgtttttataagttctctcaaacagtctcacaa 29904860  T
Q  253 aacttatgccagtagataagctcaa 277  Q
    ||||||||| |||||||||||||||    
T  29904861 aacttatgcaagtagataagctcaa 29904885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 156 - 233
Target Start/End: Original strand, 15477578 - 15477655
Alignment:
Q  156 tataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagtt 233  Q
    |||||| ||| ||||||||||||||||| |||||||||||| |||| |||||| ||||||||||||||||||||||||    
T  15477578 tataagttatattagagaacttatgaatataagctgaaaaaagcttttgaaaattgtcataagctgttttcataagtt 15477655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 123 - 258
Target Start/End: Complemental strand, 17603475 - 17603339
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 221  Q
    ||||||||||||||||| |||||||||| ||||| ||||||||| || |||||||| ||||  |||| || |||| | ||||||||| ||||||||||||    
T  17603475 ttaaattgtttttgtatatgctataagttgtttttataagctatattggagaacttctgaaaataagttgtaaaaagtttatgaaaattgtcataagctg 17603376  T
Q  222 ttttcataagttttcgaaaagagtctcataaaactta 258  Q
    ||||| |||||| ||   || |||||| |||||||||    
T  17603375 ttttcgtaagttctccctaatagtctcgtaaaactta 17603339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 123 - 230
Target Start/End: Complemental strand, 24915142 - 24915034
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 221  Q
    ||||||||||||||||| |||||||||  ||||| ||||||| |||| |||||||| ||||  |||| ||||||| ||||||||||| ||||||||| ||    
T  24915142 ttaaattgtttttgtatatgctataagctgttttcataagctgtcttggagaacttgtgaaaataagttgaaaaaagcttatgaaaaatgtcataagttg 24915043  T
Q  222 ttttcataa 230  Q
    |||||||||    
T  24915042 ttttcataa 24915034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 124 - 236
Target Start/End: Complemental strand, 37631649 - 37631536
Alignment:
Q  124 taaattgtttttgtatttgctataag-tggttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgt 222  Q
    |||||||||||||| | || ||| || || |||| |||||||| || |||||||||||||  |||||||||||| |||| |||||| ||||| |||||||    
T  37631649 taaattgtttttgtgtatgatattagctgtttttgtaagctatattggagaacttatgaaaataagctgaaaaaagcttgtgaaaattgtcagaagctgt 37631550  T
Q  223 tttcataagttttc 236  Q
    ||||||||||||||    
T  37631549 tttcataagttttc 37631536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 123 - 277
Target Start/End: Original strand, 6556950 - 6557106
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggc-ttatgaaaagtgtcataagct 220  Q
    ||||||||||||||||| || ||||||| ||||| ||||| ||| ||| |||||||||||   |||||| |||||  | || |||||| |||||||||||    
T  6556950 ttaaattgtttttgtatatgttataagttgtttttataagttatattaaagaacttatgacaataagctaaaaaaaaccttttgaaaactgtcataagct 6557049  T
Q  221 gttttcataagttttcgaaaagagtctcataaaacttatgccagtagataagctcaa 277  Q
     |||||||||||| ||  ||| ||||||| ||||||||||  |||||||||| ||||    
T  6557050 attttcataagttctctcaaatagtctcacaaaacttatgttagtagataagttcaa 6557106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 122 - 264
Target Start/End: Complemental strand, 27970387 - 27970243
Alignment:
Q  122 attaaattgtttttgtatttgctataagtggtttt-ataagctatcttagag-aacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagc 219  Q
    |||||||||||||||||| |||||||||| ||||  |||| |||| || | | ||||||||||  ||| |||||||| ||||||||||| |||||||| |    
T  27970387 attaaattgtttttgtatatgctataagttgtttccataaactatttttggggaacttatgaaaataaactgaaaaaagcttatgaaaaatgtcataaac 27970288  T
Q  220 tgttttcataagttttcgaaaagagtctcataaaacttatgccag 264  Q
     ||||| ||||||| ||  ||||||| ||| ||||||||||||||    
T  27970287 cgtttttataagttctcccaaagagtatcacaaaacttatgccag 27970243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 123 - 265
Target Start/End: Original strand, 27976574 - 27976725
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaactt---------atgaatttaagctgaaaaaggcttatgaaaagtgt 212  Q
    ||||||||||||||||| |||||||||| ||||| |||||||||||| ||||||||         |||||  |||||||||||| ||||||||||| |||    
T  27976574 ttaaattgtttttgtatatgctataagttgttttcataagctatcttcgagaacttaatgaaataatgaaaataagctgaaaaaagcttatgaaaaatgt 27976673  T
Q  213 cataagctgttttcataagttttcgaaaagagtctcataaaacttatgccagt 265  Q
    |||||||| |||||| ||||||||  ||| ||||| | |||||||||| ||||    
T  27976674 cataagctattttcaaaagttttc-caaacagtctaacaaaacttatgtcagt 27976725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 123 - 233
Target Start/End: Complemental strand, 30286611 - 30286499
Alignment:
Q  123 ttaaattgtttttgtat-ttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagct 220  Q
    ||||||||||||||||| ||||||||||| ||||| ||||||||| ||  |||||| |  || || || ||||||| ||||||||||| |||||||||||    
T  30286611 ttaaattgtttttgtatgttgctataagttgtttttataagctattttgaagaactaagaaaatttagttgaaaaaagcttatgaaaattgtcataagct 30286512  T
Q  221 gttttcataagtt 233  Q
    |||||||||||||    
T  30286511 gttttcataagtt 30286499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 123 - 277
Target Start/End: Original strand, 473143 - 473297
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 221  Q
    |||||||||||| || | |||||||||| ||||| ||||| | | || |||||||||||||  |||| ||||||| ||||||||||| ||| |||||||     
T  473143 ttaaattgttttcgtgtatgctataagttgtttttataagttctattggagaacttatgaaaataagttgaaaaaagcttatgaaaattgt-ataagctt 473241  T
Q  222 ttttcataagttttcgaaaagagtctcataaaacttatgccagtagataagctcaa 277  Q
    |||||||||||| ||  |||  || ||| | |||||||||||||||||| ||||||    
T  473242 ttttcataagttctcccaaaatgtttcacagaacttatgccagtagataggctcaa 473297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 126 - 274
Target Start/End: Original strand, 2777874 - 2778022
Alignment:
Q  126 aattgtttttgtatttgctataagtggtttta-taagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttt 224  Q
    |||||| |||||||  ||||||||  |||||| |||| || ||| |||||||||||||  ||||||||||| |||||||||| |  |||||||| || ||    
T  2777874 aattgtctttgtataagctataagctgttttaataagttaacttggagaacttatgaaaataagctgaaaacggcttatgaatac-gtcataagttggtt 2777972  T
Q  225 tcataagttttcgaaaagagtctcataaaacttatgccagtagataagct 274  Q
    ||||||||| ||  ||| ||||||| ||||||||||| | ||||||||||    
T  2777973 tcataagttctcctaaacagtctcacaaaacttatgcaaatagataagct 2778022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 141 - 277
Target Start/End: Complemental strand, 43230843 - 43230708
Alignment:
Q  141 tgctataagtggtt-ttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttttcgaa 239  Q
    |||||||||| ||| ||||| ||||| || ||||||| |||||  |||| ||||||| |||||| |||| |||||  |||||||||||||| || ||  |    
T  43230843 tgctataagttgttcttataggctatattggagaactaatgaaaataagttgaaaaaagcttataaaaactgtca--agctgttttcataaattctccta 43230746  T
Q  240 aagagtctcataaaacttatgccagtagataagctcaa 277  Q
    || | |||| ||||||||||||||||||| ||||||||    
T  43230745 aacaatctcgtaaaacttatgccagtagagaagctcaa 43230708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 124 - 221
Target Start/End: Original strand, 51688685 - 51688782
Alignment:
Q  124 taaattgtttttgtatttgctataagtggtttta-taagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 221  Q
    |||||||||||||||  |||||||||| |||||  ||||||||| | |||| |||||||| |||||||||||||  ||| |||||||||||||||||||    
T  51688685 taaattgtttttgtacatgctataagttgttttcgtaagctatcgtggaga-cttatgaaattaagctgaaaaaaacttctgaaaagtgtcataagctg 51688782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 153 - 277
Target Start/End: Original strand, 5720935 - 5721059
Alignment:
Q  153 ttttataagctatcttagagaacttatgaatttaagctgaaaaagg-cttatgaaaagtgtcataagctgttttcataagttttcgaaaagagtctcata 251  Q
    ||||||||||||| ||||||||| ||||||  | ||||||||||   |||||||||  |||||||||||||||||||||||| ||  ||| ||||  | |    
T  5720935 ttttataagctatattagagaacatatgaaaatcagctgaaaaaatacttatgaaat-tgtcataagctgttttcataagttctcccaaacagtccaaca 5721033  T
Q  252 aaacttatgccagtagataagctcaa 277  Q
    |||||||||| ||||| |||||||||    
T  5721034 aaacttatgcaagtagttaagctcaa 5721059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 125 - 228
Target Start/End: Complemental strand, 51929628 - 51929524
Alignment:
Q  125 aaattgtttttgtatttgctataag-tggttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgtt 223  Q
    ||||||||||| ||| |||  |||| || |||||||| |||| || ||||||||||| |  |||| ||||||| ||||||||||| ||||||||||||||    
T  51929628 aaattgtttttatatatgccttaagctgtttttataaactatattggagaacttatggaaataagttgaaaaaagcttatgaaaattgtcataagctgtt 51929529  T
Q  224 ttcat 228  Q
    |||||    
T  51929528 ttcat 51929524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 158 - 233
Target Start/End: Original strand, 37473418 - 37473493
Alignment:
Q  158 taagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagtt 233  Q
    |||| |||||| |||||||||||||  ||||||| |||| ||||||||||| ||||||||| |||||||| |||||    
T  37473418 taagttatcttggagaacttatgaaaataagctggaaaaagcttatgaaaaatgtcataagttgttttcaaaagtt 37473493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 190 - 277
Target Start/End: Complemental strand, 42575492 - 42575405
Alignment:
Q  190 tgaaaaaggcttatgaaaagtgtcataagctgttttcataagttttcgaaaagagtctcataaaacttatgccagtagataagctcaa 277  Q
    ||||||| ||||||||||| ||||||||| |||||| |||| |||||  ||| || |||| |||| |||||| |||||||||||||||    
T  42575492 tgaaaaaagcttatgaaaactgtcataagttgtttttataaattttctcaaacagcctcacaaaatttatgctagtagataagctcaa 42575405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 153 - 277
Target Start/End: Original strand, 5741616 - 5741740
Alignment:
Q  153 ttttataagctatcttagagaacttatgaatttaagctg-aaaaaggcttatgaaaagtgtcataagctgttttcataagttttcgaaaagagtctcata 251  Q
    ||||||||||||| ||||||||||||||||  | ||||| |||||  |||||| ||| ||||||||| |||||||||||||| ||  ||| |||   | |    
T  5741616 ttttataagctatattagagaacttatgaaaatcagctgaaaaaatacttatg-aaattgtcataagttgttttcataagttctcccaaacagttcaaca 5741714  T
Q  252 aaacttatgccagtagataagctcaa 277  Q
    |||||||||| ||||| |||||||||    
T  5741715 aaacttatgcaagtagttaagctcaa 5741740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 123 - 277
Target Start/End: Complemental strand, 41195284 - 41195132
Alignment:
Q  123 ttaaattgtttttgtatttgctat-aagtggttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 221  Q
    ||||| ||||||||||| | |||| || || ||| |||| ||||||| |||||||||||||  |||||||||||| |||||| |||| |||||||||||     
T  41195284 ttaaactgtttttgtatatactatcaactgttttcataaactatcttggagaacttatgaaaataagctgaaaaaagcttattaaaa-tgtcataagcta 41195186  T
Q  222 ttttcataagttttcgaaaagagtctcataaaacttatgccagtagataagctcaa 277  Q
    |||  | ||||| ||  ||| ||| ||  | |||||||||||||||| ||||||||    
T  41195185 tttataaaagttctcccaaacagtatc--acaacttatgccagtagacaagctcaa 41195132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 130 - 221
Target Start/End: Original strand, 42174841 - 42174933
Alignment:
Q  130 gtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 221  Q
    |||||||||| |||||||||| ||||| ||||| ||| || |||||||||||||  |||| | ||||  ||||||||||| ||||||||||||    
T  42174841 gtttttgtatatgctataagttgtttttataagttatattggagaacttatgaaaataagttaaaaacagcttatgaaaattgtcataagctg 42174933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 128 - 260
Target Start/End: Original strand, 36872716 - 36872845
Alignment:
Q  128 ttgtttttgtatttgctataag-tggttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttc 226  Q
    |||||||||||| ||||||||| || ||||| ||||||| ||  ||||||||||||  |||| ||||||| |||||| |||| ||||||||   ||||||    
T  36872716 ttgtttttgtatgtgctataagttgtttttacaagctatattgcagaacttatgaaaataagttgaaaaa-gcttatcaaaattgtcataa---gttttc 36872811  T
Q  227 ataagttttcgaaaagagtctcataaaacttatg 260  Q
    |||| || || |||| ||||||  ||||||||||    
T  36872812 ataaattctccaaaacagtctcgcaaaacttatg 36872845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 190 - 277
Target Start/End: Complemental strand, 37517189 - 37517102
Alignment:
Q  190 tgaaaaaggcttatgaaaagtgtcataagctgttttcataagttttcgaaaagagtctcataaaacttatgccagtagataagctcaa 277  Q
    ||||||| |||| |||||| ||||||||||||||||| |||||| |   | | ||||||| ||||||||||| |||| ||||||||||    
T  37517189 tgaaaaaagcttttgaaaattgtcataagctgttttcgtaagttctttcatacagtctcacaaaacttatgcaagtatataagctcaa 37517102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 186 - 277
Target Start/End: Original strand, 38001639 - 38001729
Alignment:
Q  186 aagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttttcgaaaagagtctcataaaacttatgccagtagataagctcaa 277  Q
    ||||||||||   |||||||| || ||||||||||||||||||||||| ||  ||| ||||||| |||||||||| |||| ||||| |||||    
T  38001639 aagctgaaaacaacttatgaacag-gtcataagctgttttcataagttctcccaaacagtctcacaaaacttatgtcagttgataaactcaa 38001729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 123 - 233
Target Start/End: Complemental strand, 41184741 - 41184630
Alignment:
Q  123 ttaaattgtttttgtatttgctataagt-ggttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 221  Q
    ||||||||||||||||| |  ||||| | |||||||||  | || || || ||||||||||  |||| |||||||  |||||||||| |||||||||||     
T  41184741 ttaaattgtttttgtatatattataatttggttttatataccatattggaaaacttatgaaaataagttgaaaaaaacttatgaaaattgtcataagcta 41184642  T
Q  222 ttttcataagtt 233  Q
    ||||||||||||    
T  41184641 ttttcataagtt 41184630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 156 - 254
Target Start/End: Complemental strand, 27820253 - 27820156
Alignment:
Q  156 tataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttttcgaaaagagtctcataaaa 254  Q
    |||||||||||||| |||| |||||||  |||||||||||  ||||||||| | ||| ||||||| ||||||||| || || |||| ||||||| ||||    
T  27820253 tataagctatcttaaagaatttatgaaaataagctgaaaatagcttatgaacaatgtaataagct-ttttcataaattctccaaaacagtctcacaaaa 27820156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 163 - 273
Target Start/End: Complemental strand, 38018414 - 38018304
Alignment:
Q  163 tatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttttcgaaaagagtctcataaaacttatgcc 262  Q
    |||||| ||||| | |||||  |||||||||||   || ||||| | |||| ||| ||| ||||||||||||||  ||  ||||||| ||||||||||||    
T  38018414 tatcttggagaattcatgaaaataagctgaaaatacctaatgaacaatgtcctaatctgctttcataagttttcccaaccagtctcacaaaacttatgcc 38018315  T
Q  263 agtagataagc 273  Q
    |||||||||||    
T  38018314 agtagataagc 38018304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 153 - 277
Target Start/End: Complemental strand, 27146315 - 27146191
Alignment:
Q  153 ttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagtt-ttcgaaaagagtctcata 251  Q
    |||| ||| |||||||  |||||||| |||  |||| ||||||  ||||||||| | ||||||||| ||||| | |||||| ||| || | ||||||| |    
T  27146315 ttttgtaaactatcttgaagaacttacgaaagtaagttgaaaacagcttatgaacaatgtcataagttgtttccttaagttcttccaaca-agtctcaca 27146217  T
Q  252 aaacttatgccagtagataagctcaa 277  Q
    |||||||||||| |||||||||||||    
T  27146216 aaacttatgccaatagataagctcaa 27146191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 124 - 220
Target Start/End: Complemental strand, 27820427 - 27820330
Alignment:
Q  124 taaattgtttttgtatttgctataag-tggttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagct 220  Q
    |||||||||| |||||  |||||| | || |||||||||||||||| ||||| |||||||  |||||||||||  ||||||||| | |||| ||||||    
T  27820427 taaattgtttatgtataagctatatgctgtttttataagctatcttggagaatttatgaaaataagctgaaaatagcttatgaacaatgtcgtaagct 27820330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 160 - 233
Target Start/End: Complemental strand, 38503518 - 38503445
Alignment:
Q  160 agctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagtt 233  Q
    ||||||||| |||||||||||||  |||||||||||   |||||||| | ||||||| ||||||| ||||||||    
T  38503518 agctatcttggagaacttatgaaaataagctgaaaacaacttatgaacaatgtcataggctgtttccataagtt 38503445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 131 - 233
Target Start/End: Complemental strand, 40977487 - 40977383
Alignment:
Q  131 tttttgtatttgctataag--tggttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcat 228  Q
    ||||||||| |||||||||  |  |||||||||| || | ||||||| ||||||  ||||||| |||| |||| |||||| ||||||||  |||||||||    
T  40977487 tttttgtatatgctataaggttaattttataagccatataagagaacatatgaaaataagctggaaaaagcttttgaaaattgtcataaattgttttcat 40977388  T
Q  229 aagtt 233  Q
    |||||    
T  40977387 aagtt 40977383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 123 - 208
Target Start/End: Original strand, 47432075 - 47432160
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaa 208  Q
    |||||||||||||| || |||||||||  |||||||||| ||| ||  |||| |||||||  |||||||||||| |||| ||||||    
T  47432075 ttaaattgtttttgaatatgctataaggtgttttataagttatattgaagaatttatgaaaataagctgaaaaaagcttgtgaaaa 47432160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 126 - 277
Target Start/End: Original strand, 1432497 - 1432649
Alignment:
Q  126 aattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttt 224  Q
    |||||||||| |||  ||||||| | ||||| |||| ||||||| |||||||||||||  |||||| |  | | |||||||| | ||||||| ||| |||    
T  1432497 aattgtttttttataagctataaattgttttcataaactatcttggagaacttatgaaagtaagctaagtatgtcttatgaacaatgtcatacgctattt 1432596  T
Q  225 tcataagttttcgaaaagagtctcataaaacttatgccagtagataagctcaa 277  Q
    ||||||||| |   ||| ||||||| |||| ||||| | || |||||||||||    
T  1432597 tcataagttcttccaaacagtctcacaaaatttatgtcggtggataagctcaa 1432649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 157 - 233
Target Start/End: Complemental strand, 7137054 - 7136979
Alignment:
Q  157 ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagtt 233  Q
    |||||||||||| |||||||||||||  |||||||||||   |||||||| | ||||||||||  ||||||||||||    
T  7137054 ataagctatcttggagaacttatgaaaataagctgaaaataacttatgaata-tgtcataagcgattttcataagtt 7136979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 131 - 274
Target Start/End: Original strand, 14331970 - 14332112
Alignment:
Q  131 tttttgtatttgctataagtggttttataa-gctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcata 229  Q
    ||||||||| |||||||||| ||||   || |||||||| ||| |||| |||| ||||||||||||| ||| | |||| |||||||||  ||||||||||    
T  14331970 tttttgtatatgctataagttgtttccaaatgctatcttggaggactt-tgaaattaagctgaaaaaagctaacgaaa-gtgtcataatttgttttcata 14332067  T
Q  230 agttttcgaaaagagtctcataaaacttatgccagtagataagct 274  Q
    ||||  |   || ||||||| ||||| |||| |||||||||||||    
T  14332068 agttcacccgaacagtctcacaaaacatatgacagtagataagct 14332112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 225 - 277
Target Start/End: Complemental strand, 14385781 - 14385729
Alignment:
Q  225 tcataagttttcgaaaagagtctcataaaacttatgccagtagataagctcaa 277  Q
    ||||||||| || |||| |||||||  ||||||||||||||||||||||||||    
T  14385781 tcataagttctccaaaatagtctcacgaaacttatgccagtagataagctcaa 14385729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 156 - 263
Target Start/End: Original strand, 33186318 - 33186426
Alignment:
Q  156 tataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagt-gtcataagctgttttcataagttttcgaaaagagtctcataaaa 254  Q
    ||||| |||| |||||||||||||  |  |||||||||||| |||| |||||| | ||||||| | ||||||||||||| ||  | | ||||||| ||||    
T  33186318 tataatctatattagagaacttatataaataagctgaaaaaagcttttgaaaaattgtcataaccagttttcataagttctcctagacagtctcacaaaa 33186417  T
Q  255 cttatgcca 263  Q
    |||||||||    
T  33186418 cttatgcca 33186426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 142 - 233
Target Start/End: Complemental strand, 37842427 - 37842336
Alignment:
Q  142 gctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagtt 233  Q
    ||||||||| ||||| ||||||||||||  ||||||||| ||  |||||||||||  ||||||||| | |||||| || ||||||||||||||    
T  37842427 gctataagttgttttcataagctatcttgaagaacttataaaaataagctgaaaactgcttatgaaca-tgtcattagatgttttcataagtt 37842336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 213 - 277
Target Start/End: Original strand, 38247397 - 38247461
Alignment:
Q  213 cataagctgttttcataagttttcgaaaagagtctcataaaacttatgccagtagataagctcaa 277  Q
    ||||||||||||||||||||| ||  ||| |||  || |||||||||||||||||||||| ||||    
T  38247397 cataagctgttttcataagttctcccaaacagtgacacaaaacttatgccagtagataagttcaa 38247461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 441 - 492
Target Start/End: Complemental strand, 11893655 - 11893604
Alignment:
Q  441 tgttttataagctattgtgaagactttatgaaaataagctaaaaacaactta 492  Q
    ||||| |||||||||| |||||| |||||| ||||||||| |||||||||||    
T  11893655 tgtttcataagctattttgaagagtttatggaaataagctgaaaacaactta 11893604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 198 - 277
Target Start/End: Complemental strand, 37617480 - 37617401
Alignment:
Q  198 gcttatgaaaagtgtcataagctgttttcataagttttcgaaaagagtctcataaaacttatgccagtagataagctcaa 277  Q
    ||||||||||  ||||| ||||||||||||||| || ||| ||| ||||||| |||||||| | || ||||||| |||||    
T  37617480 gcttatgaaatttgtcaaaagctgttttcataaattctcgcaaacagtctcacaaaacttacggcaatagataaactcaa 37617401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 125 - 179
Target Start/End: Original strand, 39596578 - 39596633
Alignment:
Q  125 aaattgtttttgtatttgctataag-tggttttataagctatcttagagaacttat 179  Q
    |||||||||||||||  |||||||| ||||||||||||||||||| |||| |||||    
T  39596578 aaattgtttttgtataagctataagatggttttataagctatcttggagagcttat 39596633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 199 - 274
Target Start/End: Complemental strand, 52863365 - 52863290
Alignment:
Q  199 cttatgaaaagtgtcataagctgttttcataagttttcgaaaagagtctcataaaacttatgccagtagataagct 274  Q
    |||| ||||| ||||||||||| ||| |||||||| ||  ||| |||| || |||| |||||||||||||||||||    
T  52863365 cttaagaaaaatgtcataagctttttccataagttctccgaaacagtcacacaaaaattatgccagtagataagct 52863290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 126 - 195
Target Start/End: Original strand, 49888749 - 49888819
Alignment:
Q  126 aattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaa 195  Q
    ||||||||| ||||  ||||| ||| ||||| ||||||||||||||||||||||||||  ||||| |||||    
T  49888749 aattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaa 49888819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 230
Target Start/End: Original strand, 36872299 - 36872352
Alignment:
Q  177 tatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataa 230  Q
    |||||| ||||| ||||||| ||||||||||| | | |||||||||||||||||    
T  36872299 tatgaaattaagttgaaaaaagcttatgaaaattataataagctgttttcataa 36872352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 153 - 233
Target Start/End: Complemental strand, 3887692 - 3887612
Alignment:
Q  153 ttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagtt 233  Q
    ||||| |||||| ||  |||||||||||||  |||| | ||||  ||||||||| | ||||||||| ||||||||||||||    
T  3887692 ttttacaagctagctaggagaacttatgaaaataagttaaaaacagcttatgaacaatgtcataagatgttttcataagtt 3887612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 178 - 274
Target Start/End: Complemental strand, 7119972 - 7119877
Alignment:
Q  178 atgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttttcgaaaagagtctcataaaacttatgccagtagataagct 274  Q
    |||||| ||||||||||   ||||||||| | | ||||||| ||||||||||| || | | ||| ||||||| ||||||||||| |||| |||||||    
T  7119972 atgaatataagctgaaagcagcttatgaaga-tatcataagttgttttcataaattcttgcaaacagtctcacaaaacttatgctagtatataagct 7119877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 157 - 233
Target Start/End: Complemental strand, 10199464 - 10199389
Alignment:
Q  157 ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagtt 233  Q
    ||||||||| ||||||| ||||||||  |||||||||||   |||||||| | ||||||||||| ||||||| ||||    
T  10199464 ataagctattttagagagcttatgaaaataagctgaaaacaacttatgaaca-tgtcataagctattttcatgagtt 10199389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 157 - 233
Target Start/End: Original strand, 10744315 - 10744390
Alignment:
Q  157 ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagtt 233  Q
    ||||||| ||||||||||||||| ||  |||| ||||||  ||||||||| | || ||||||||||||||| |||||    
T  10744315 ataagctgtcttagagaacttataaaaataagatgaaaacagcttatgaaca-tgccataagctgttttcacaagtt 10744390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 225 - 277
Target Start/End: Complemental strand, 33204382 - 33204330
Alignment:
Q  225 tcataagttttcgaaaagagtctcataaaacttatgccagtagataagctcaa 277  Q
    ||||||||| ||  ||| ||||||| |||||||||| ||||||||||||||||    
T  33204382 tcataagttctcccaaacagtctcacaaaacttatgtcagtagataagctcaa 33204330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 158 - 277
Target Start/End: Complemental strand, 38116133 - 38116013
Alignment:
Q  158 taagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttt-tcgaaaagagtctcataaaact 256  Q
    |||| |||||| |||||||||||||  ||||||| |||   |||| ||| | ||||||||||| ||||| ||  ||| || ||||  |||||| ||||||    
T  38116133 taagttatcttggagaacttatgaaagtaagctggaaacaacttaggaacaatgtcataagctattttcttatttttctccaaaaccgtctcacaaaact 38116034  T
Q  257 tatgccagtagataagctcaa 277  Q
    || | ||||||||||||||||    
T  38116033 tacgtcagtagataagctcaa 38116013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 157 - 229
Target Start/End: Original strand, 45975704 - 45975776
Alignment:
Q  157 ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcata 229  Q
    |||||||||||| ||||| |||||||  |||||||||||  ||||||||| | ||| |||  |||||||||||    
T  45975704 ataagctatcttggagaatttatgaaaataagctgaaaacagcttatgaataatgttatacactgttttcata 45975776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 157 - 233
Target Start/End: Complemental strand, 51695551 - 51695475
Alignment:
Q  157 ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagtt 233  Q
    |||||||||||| ||||| |||||||  |||||||||||  ||||||||| | ||| ||||| |||||  |||||||    
T  51695551 ataagctatcttggagaatttatgaaaataagctgaaaatagcttatgaacaatgtgataagttgtttatataagtt 51695475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 53; Significance: 4e-21; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 157 - 273
Target Start/End: Original strand, 31813175 - 31813291
Alignment:
Q  157 ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttttcgaaaagagtctcataaaact 256  Q
    |||||||||||| |||||| ||||||  ||||||||||| |||||||||| | | ||||||||  |||||||||||| ||  ||| ||||||| ||||||    
T  31813175 ataagctatcttggagaacatatgaaaataagctgaaaacggcttatgaacaatctcataagcaattttcataagttctcccaaatagtctcacaaaact 31813274  T
Q  257 tatgccagtagataagc 273  Q
    |||||||||| ||||||    
T  31813275 tatgccagtaaataagc 31813291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 125 - 227
Target Start/End: Complemental strand, 34430550 - 34430447
Alignment:
Q  125 aaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgtt 223  Q
    ||||||||||||||| || ||||||  ||||| |||||||||||| ||||| |||||||  |||||||||||| |||||||| || ||||||||||||||    
T  34430550 aaattgtttttgtatatgttataaggtgttttcataagctatcttggagaagttatgaaaataagctgaaaaaagcttatgataaatgtcataagctgtt 34430451  T
Q  224 ttca 227  Q
    ||||    
T  34430450 ttca 34430447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 157 - 227
Target Start/End: Original strand, 9763574 - 9763644
Alignment:
Q  157 ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttca 227  Q
    ||||||||| ||  |||||||||||| ||||| ||||||| |||||| |||||||||||||||||||||||    
T  9763574 ataagctatattgtagaacttatgaaattaagttgaaaaaagcttatcaaaagtgtcataagctgttttca 9763644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 126 - 267
Target Start/End: Complemental strand, 20368268 - 20368127
Alignment:
Q  126 aattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttt 224  Q
    ||||||||||||||  | ||||||| ||||| ||||||| |||| |||||||||||||  |||| |||||   ||||||||| | ||||||||| |||||    
T  20368268 aattgtttttgtatgagttataagttgttttcataagctttcttggagaacttatgaaaataagttgaaactagcttatgaaca-tgtcataagttgttt 20368170  T
Q  225 tcataagttttcgaaaagagtctcataaaacttatgccagtag 267  Q
    ||||||||| ||  ||| ||||| | |||||||||| ||||||    
T  20368169 tcataagttctcccaaatagtcttacaaaacttatgtcagtag 20368127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 135 - 272
Target Start/End: Original strand, 24982696 - 24982834
Alignment:
Q  135 tgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagtt 233  Q
    ||||| |||||||||  ||||| ||||| ||| || ||||||||||||   |||||| ||||| ||| || |||| |||||||||||||| ||| | |||    
T  24982696 tgtatatgctataagctgttttcataagttattttggagaacttatgagggtaagctaaaaaaagctcattaaaaatgtcataagctgttctcaaatgtt 24982795  T
Q  234 ttcgaaaagagtctcataaaacttatgccagtagataag 272  Q
     || |||| ||||||| ||||||||||  ||||||||||    
T  24982796 ctccaaaacagtctcacaaaacttatgttagtagataag 24982834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 176 - 277
Target Start/End: Original strand, 848022 - 848122
Alignment:
Q  176 ttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttttcgaaaagagtctcataaaacttatgccagtagataagctc 275  Q
    |||||||  |||||||||||| ||||| ||||| |||||||||| ||||| ||||||| |   ||| ||||||| ||||||||||| | |||||||||||    
T  848022 ttatgaaaataagctgaaaaaagcttaagaaaaatgtcataagcagtttttataagttcttccaaacagtctcacaaaacttatgcta-tagataagctc 848120  T
Q  276 aa 277  Q
    ||    
T  848121 aa 848122  T

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Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 123 - 231
Target Start/End: Complemental strand, 9093647 - 9093538
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 221  Q
    |||||||||||| ||||  ||||||||  ||||| ||||||| |||||||||||||| |||  |||||||||||  | |||| || | |||||||||||     
T  9093647 ttaaattgttttcgtataagctataagctgttttcataagctgtcttagagaacttaagaaaataagctgaaaacaggttattaacaatgtcataagcta 9093548  T
Q  222 ttttcataag 231  Q
    ||||||||||    
T  9093547 ttttcataag 9093538  T

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Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 205 - 277
Target Start/End: Original strand, 4163215 - 4163287
Alignment:
Q  205 aaaagtgtcataagctgttttcataagttttcgaaaagagtctcataaaacttatgccagtagataagctcaa 277  Q
    |||| ||||||||| |||||||||| ||| ||   || |||||| ||||||||||||||||||||||||||||    
T  4163215 aaaattgtcataagttgttttcataggttctcacgaacagtctcgtaaaacttatgccagtagataagctcaa 4163287  T

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Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 205 - 277
Target Start/End: Original strand, 4224836 - 4224908
Alignment:
Q  205 aaaagtgtcataagctgttttcataagttttcgaaaagagtctcataaaacttatgccagtagataagctcaa 277  Q
    |||| ||||||||| |||||||||| ||| ||   || |||||| ||||||||||||||||||||||||||||    
T  4224836 aaaattgtcataagttgttttcataggttctcacgaacagtctcgtaaaacttatgccagtagataagctcaa 4224908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 123 - 233
Target Start/End: Original strand, 2735048 - 2735159
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 221  Q
    ||||||| |||||||||   |||||||  ||||| |||||| |||||  | ||||||||||  ||||| |||||  ||||||||||| |||||||||| |    
T  2735048 ttaaattatttttgtataatctataagctgttttcataagcaatcttgaacaacttatgaaaataagccgaaaacagcttatgaaaaatgtcataagccg 2735147  T
Q  222 ttttcataagtt 233  Q
    ||||||||||||    
T  2735148 ttttcataagtt 2735159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 126 - 208
Target Start/End: Original strand, 6536597 - 6536680
Alignment:
Q  126 aattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaa 208  Q
    |||||||||||||| |||||||||| ||||| | ||||||| || ||||| |||||||  |||| ||||||| |||||||||||    
T  6536597 aattgtttttgtatatgctataagttgtttttagaagctatattggagaatttatgaaaataagttgaaaaaagcttatgaaaa 6536680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 123 - 193
Target Start/End: Complemental strand, 6909963 - 6909892
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaa 193  Q
    ||||||||||||||||| |||||||||| ||||| ||||  |||||| ||||| ||||||| ||||||||||    
T  6909963 ttaaattgtttttgtatatgctataagttgttttcataacatatcttggagaatttatgaaattaagctgaa 6909892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 170 - 273
Target Start/End: Complemental strand, 9912234 - 9912131
Alignment:
Q  170 gagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttttcgaaaagagtctcataaaacttatgccagtagat 269  Q
    |||||||||||||  |||||| ||||  ||||||||| | |||||||||||| ||||||||||| ||  ||| |||| |  |||||||||  ||||||||    
T  9912234 gagaacttatgaaaataagctcaaaacagcttatgaacaatgtcataagctggtttcataagttctccgaaacagtcgcccaaaacttatatcagtagat 9912135  T
Q  270 aagc 273  Q
    ||||    
T  9912134 aagc 9912131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 123 - 278
Target Start/End: Original strand, 24626274 - 24626422
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 221  Q
    ||||||||||||||||| | |||||||| ||||| |||||||||||| ||| | |||        |||||||||| | ||||||| || |||||||||||    
T  24626274 ttaaattgtttttgtatattctataagttgttttcataagctatcttggagtaatta--------agctgaaaaaagtttatgaagagcgtcataagctg 24626365  T
Q  222 ttttcataagttttcgaaaagagtctcataaaacttatgccagtagataagctcaat 278  Q
    |||||| ||||||||  ||| | ||||| ||| || |||  | ||||||||||||||    
T  24626366 ttttcaaaagttttcccaaacattctcacaaagctgatgttactagataagctcaat 24626422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 202 - 277
Target Start/End: Original strand, 30926578 - 30926653
Alignment:
Q  202 atgaaaagtgtcataagctgttttcataagttttcgaaaagagtctcataaaacttatgccagtagataagctcaa 277  Q
    ||||||| |||||||||||||||||||||||| |   ||| |||||||| ||| ||||||||| | ||||||||||    
T  30926578 atgaaaattgtcataagctgttttcataagttcttccaaacagtctcatcaaatttatgccagaaaataagctcaa 30926653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 155 - 233
Target Start/End: Complemental strand, 35070708 - 35070630
Alignment:
Q  155 ttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagtt 233  Q
    ||||||||||| || |||||||||||||   ||||  ||||| |||| |||||| ||||||||||||||||| ||||||    
T  35070708 ttataagctattttggagaacttatgaaaacaagcccaaaaaagcttgtgaaaattgtcataagctgttttcgtaagtt 35070630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 126 - 259
Target Start/End: Original strand, 35099019 - 35099152
Alignment:
Q  126 aattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttt 224  Q
    |||||||||||||| || ||||||| ||||| |||||||||||||||| | || ||||  |||| |||||||  |||| ||||| |||||| ||||||||    
T  35099019 aattgtttttgtatatgttataagttgttttcataagctatcttagagtatttttgaaaataagttgaaaaa-acttacgaaaaatgtcattagctgttt 35099117  T
Q  225 tcataagttttcgaaaagagtctcataaaacttat 259  Q
    || ||| || ||  ||| || |||| |||||||||    
T  35099118 tcctaaattctcccaaacagcctcagaaaacttat 35099152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 388 - 447
Target Start/End: Original strand, 9027508 - 9027568
Alignment:
Q  388 ataagtgcttatc-atgagttatttctacactaaaaaataaaataaagtcaaactgtttta 447  Q
    ||||||||||||| || || |||||||||| || || ||||||||||||||||||||||||    
T  9027508 ataagtgcttatctataagctatttctacaatagaagataaaataaagtcaaactgtttta 9027568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 198 - 278
Target Start/End: Complemental strand, 9559437 - 9559357
Alignment:
Q  198 gcttatgaaaagtgtcataagctgttttcataagttttcgaaaagagtctcataaaacttatgccagtagataagctcaat 278  Q
    ||||||||| | |||  |||||||||||||||| || ||  ||| ||||||| ||||||||||||| ||||||| ||||||    
T  9559437 gcttatgaacaatgttgtaagctgttttcataacttctcctaaacagtctcacaaaacttatgccaatagataatctcaat 9559357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 123 - 230
Target Start/End: Original strand, 18076175 - 18076290
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggtttt-ataagctatctt--aga-----gaacttatgaatttaagctgaaaaaggcttatgaaaagtgtca 214  Q
    ||||||||||||| || ||||||||||| ||||| ||||||||| ||  |||     |||||||||||| |||| ||||||  ||| ||||||| |||||    
T  18076175 ttaaattgtttttctaattgctataagttgtttttataagctatattgaagaactaagaacttatgaatataagttgaaaacagctcatgaaaattgtca 18076274  T
Q  215 taagctgttttcataa 230  Q
    ||||||| ||||||||    
T  18076275 taagctggtttcataa 18076290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 210 - 274
Target Start/End: Original strand, 30536570 - 30536634
Alignment:
Q  210 tgtcataagctgttttcataagttttcgaaaagagtctcataaaacttatgccagtagataagct 274  Q
    ||||||||||| |||||||||||  ||  ||| ||||||| |||||||| |||||||||||||||    
T  30536570 tgtcataagctattttcataagtcctcccaaacagtctcacaaaacttacgccagtagataagct 30536634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 161 - 233
Target Start/End: Original strand, 31624108 - 31624179
Alignment:
Q  161 gctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagtt 233  Q
    |||||||| ||||| |||||||  |||| ||||||  ||||||||| | ||||||||||||||||||||||||    
T  31624108 gctatcttggagaaattatgaaaataagttgaaaacagcttatgaaca-tgtcataagctgttttcataagtt 31624179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 185 - 271
Target Start/End: Complemental strand, 19411577 - 19411491
Alignment:
Q  185 taagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttttcgaaaagagtctcataaaacttatgccagtagataa 271  Q
    ||||| |||||| |||||||| || ||||||||||||||| || ||||| ||  ||| | ||  ||||||||||||| |||||||||    
T  19411577 taagccgaaaaaagcttatgagaactgtcataagctgtttacaaaagttctcccaaacattcatataaaacttatgcaagtagataa 19411491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 123 - 195
Target Start/End: Complemental strand, 837307 - 837234
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaa 195  Q
    |||||||||||| || |  ||||||||| ||||| || ||||||||| |||||||||||||  |||||||||||    
T  837307 ttaaattgttttggtgtaagctataagtagttttcattagctatcttggagaacttatgaaaataagctgaaaa 837234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 419 - 455
Target Start/End: Complemental strand, 31672575 - 31672538
Alignment:
Q  419 aaaaaataaaataaagtcaaactgtttt-ataagctat 455  Q
    |||||||||||||||||||||||||||| |||||||||    
T  31672575 aaaaaataaaataaagtcaaactgttttcataagctat 31672538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 143 - 277
Target Start/End: Original strand, 13907584 - 13907717
Alignment:
Q  143 ctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttttcgaaaa 241  Q
    |||||||| ||||| |||||| ||||| ||||| |||||||  ||| |||||||   ||| |||| | ||||| ||||||||||||||| || ||  |||    
T  13907584 ctataagttgttttcataagccatcttggagaaattatgaaaataaactgaaaataacttgtgaacaatgtcagaagctgttttcataaattctctcaaa 13907683  T
Q  242 gagtctcataaaacttatgccagtagataagctcaa 277  Q
      |||||  ||||||||||||| ||||||| |||||    
T  13907684 ccgtctc--aaaacttatgccactagataaactcaa 13907717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 210 - 277
Target Start/End: Original strand, 33089572 - 33089640
Alignment:
Q  210 tgtcataagctgttttcataagttttcgaaaagagtctcataaa-acttatgccagtagataagctcaa 277  Q
    |||| ||||||||||||||||||| ||  ||| ||||||| ||| || |||| ||||||||||||||||    
T  33089572 tgtcctaagctgttttcataagttctctgaaatagtctcacaaatacatatgtcagtagataagctcaa 33089640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 157 - 274
Target Start/End: Original strand, 22245 - 22362
Alignment:
Q  157 ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttttcgaaaagagtctcataaaact 256  Q
    ||||||||| || || ||||||||||  |||||||||||| ||||| ||||| |||||||||||||||  ||||||||||   || || |||| ||||||    
T  22245 ataagctatgttggaaaacttatgaaaataagctgaaaaaagcttacgaaaattgtcataagctgtttctataagttttccggaacaggctcacaaaact 22344  T
Q  257 tatgccagtagataagct 274  Q
    ||||||| ||||||||||    
T  22345 tatgccattagataagct 22362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0528 (Bit Score: 46; Significance: 6e-17; HSPs: 1)
Name: scaffold0528
Description:

Target: scaffold0528; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 192 - 277
Target Start/End: Complemental strand, 1003 - 918
Alignment:
Q  192 aaaaaggcttatgaaaagtgtcataagctgttttcataagttttcgaaaagagtctcataaaacttatgccagtagataagctcaa 277  Q
    ||||| ||||||||||| ||||||||||| |||| ||||||| || |||| ||| ||| |||||||||||| ||||||||||||||    
T  1003 aaaaaagcttatgaaaaatgtcataagctatttttataagttgtccaaaacagtatcacaaaacttatgccggtagataagctcaa 918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 157 - 257
Target Start/End: Original strand, 58756 - 58856
Alignment:
Q  157 ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttttcgaaaagagtctcataaaact 256  Q
    ||||||||| ||  |||||||||||| ||||| ||||||| ||||||||||| |||||||| ||| |||||||| ||||| |||| |||| || ||||||    
T  58756 ataagctatgttgaagaacttatgaaattaagttgaaaaaagcttatgaaaattgtcataaactgctttcataaattttcaaaaacagtcacacaaaact 58855  T
Q  257 t 257  Q
    |    
T  58856 t 58856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 210 - 277
Target Start/End: Original strand, 24688 - 24755
Alignment:
Q  210 tgtcataagctgttttcataagttttcgaaaagagtctcataaaacttatgccagtagataagctcaa 277  Q
    |||||||||||||||| ||||||| ||  ||| ||||||| ||||| ||||||| |||||| ||||||    
T  24688 tgtcataagctgttttgataagttctcccaaacagtctcacaaaacatatgccaatagatacgctcaa 24755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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