View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1172_high_124 (Length: 251)
Name: NF1172_high_124
Description: NF1172
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1172_high_124 |
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Alignment Details
Target: chr4 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 9498008 - 9497769
Alignment:
| Q |
1 |
tgtctcattattcaggaaagccatgttcgggacagctctaaccaaagcatacagatccactaacaattaacatcagatcaatatcttttgttgtcattta |
100 |
Q |
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| T |
9498008 |
tgtctcattattcaggaaagccatgttcgggacagctctaaccaaagcatacagatccactaacaattaacatcagatgaatatcttttgttgtcattta |
9497909 |
T |
|
| Q |
101 |
cctcaccatattgtatttcttattgcttcaaataacaagaatcaatttgttaacatcaaaggagaaaggcacccgtctcccatcctatcaatcggcaagc |
200 |
Q |
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||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
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| T |
9497908 |
cctcaccatattgtatttctttttgtttcaaataacaagaatcaatttgttaacatcaaaggagaaaggcacccgtctcccatcccatcaatcggcaagc |
9497809 |
T |
|
| Q |
201 |
ctcagattattttaatgcagtacacttcatgtatgttcat |
240 |
Q |
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||||||||||||||||| |||||||||||||||||||||| |
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| T |
9497808 |
ctcagattattttaatgtagtacacttcatgtatgttcat |
9497769 |
T |
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