View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1172_high_27 (Length: 496)

Name: NF1172_high_27
Description: NF1172
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1172_high_27
NF1172_high_27
[»] chr5 (3 HSPs)
chr5 (117-466)||(6381450-6381797)
chr5 (116-147)||(6380983-6381014)
chr5 (211-281)||(3135922-3135992)
[»] chr3 (8 HSPs)
chr3 (48-281)||(46187695-46187936)
chr3 (177-280)||(45529392-45529495)
chr3 (172-280)||(55125267-55125375)
chr3 (233-280)||(46187148-46187195)
chr3 (116-147)||(46187285-46187316)
chr3 (232-282)||(13810598-13810648)
chr3 (234-280)||(48219275-48219321)
chr3 (232-284)||(37373961-37374013)
[»] chr1 (5 HSPs)
chr1 (48-232)||(29148752-29148939)
chr1 (201-281)||(13361602-13361682)
chr1 (117-147)||(29148298-29148328)
chr1 (192-237)||(9429808-9429853)
chr1 (177-281)||(11032164-11032268)
[»] chr4 (9 HSPs)
chr4 (220-269)||(37114584-37114633)
chr4 (172-268)||(6680282-6680378)
chr4 (177-282)||(7988228-7988333)
chr4 (179-283)||(50056906-50057010)
chr4 (177-280)||(43079160-43079263)
chr4 (233-287)||(39844889-39844943)
chr4 (232-282)||(52720595-52720645)
chr4 (232-281)||(25370430-25370479)
chr4 (232-281)||(52597749-52597798)
[»] scaffold0455 (1 HSPs)
scaffold0455 (76-164)||(12436-12523)
[»] chr6 (1 HSPs)
chr6 (76-164)||(28134400-28134487)
[»] scaffold0181 (2 HSPs)
scaffold0181 (236-287)||(15071-15122)
scaffold0181 (222-281)||(15901-15960)
[»] chr7 (4 HSPs)
chr7 (172-280)||(12732780-12732888)
chr7 (174-268)||(12732259-12732353)
chr7 (177-250)||(27600040-27600113)
chr7 (225-282)||(48881053-48881110)
[»] chr8 (2 HSPs)
chr8 (172-250)||(42915750-42915828)
chr8 (220-268)||(37562307-37562355)
[»] chr2 (1 HSPs)
chr2 (232-281)||(28223787-28223836)


Alignment Details
Target: chr5 (Bit Score: 275; Significance: 1e-153; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 275; E-Value: 1e-153
Query Start/End: Original strand, 117 - 466
Target Start/End: Original strand, 6381450 - 6381797
Alignment:
Q  117 ggtggtgggtgagagagacatggaggagagagaatggcaggtggtgtgnnnnnnn--tctaatgttgagagtctatgataagacaatgttctttgcttaa 214  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||         |||||| ||||||||||||||||||||||||||||||||||||    
T  6381450 ggtggtgggtgagagagacatggaggagagagaatggcaggtggtgtgaaaaaaaaatctaatattgagagtctatgataagacaatgttctttgcttaa 6381549  T
Q  215 tttagtggttaaaattgactttcctatggtgagaaagttttatcctttcccatgtaaaatgccaccttatttgtttgtcttgaatattaattcttagcta 314  Q
    | |||||||||||||||||||||||||||||  |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  6381550 tctagtggttaaaattgactttcctatggtggaaaagttttatcctttcccatgtgaaatgccaccttatttgtttgtcttgaatattaattcttagcta 6381649  T
Q  315 tgaagttactacggtaatgaatgaatgagagagcttatgattatatgaatccaaattcaacttatgtatgtaaaagacaaaaagtcataaaagtgttgtg 414  Q
    |||||||||||||||    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6381650 tgaagttactacggt----agtgaatgagagagcttatgattatatgaatccaaattcaacttatgtatgtaaaagacaaaaagtcataaaagtgttgtg 6381745  T
Q  415 ttagcatccatttgcttccatgttccatactttattcaatgcatagtataat 466  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  6381746 ttagcatccatttgcttccatgttccatactttattcaatgcgtagtataat 6381797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 116 - 147
Target Start/End: Complemental strand, 6381014 - 6380983
Alignment:
Q  116 tggtggtgggtgagagagacatggaggagaga 147  Q
    ||||||||||||||||||||||||||||||||    
T  6381014 tggtggtgggtgagagagacatggaggagaga 6380983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 211 - 281
Target Start/End: Complemental strand, 3135992 - 3135922
Alignment:
Q  211 ttaatttagtggttaaaattgactttcctatggtgagaaagttttatcctttcccatgtaaaatgccacct 281  Q
    ||||| |||||| ||||||  ||||||| |||||| ||| ||||||| | ||||||||| |||||||||||    
T  3135992 ttaatctagtggctaaaataaactttcccatggtgggaaggttttataccttcccatgtgaaatgccacct 3135922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 135; Significance: 4e-70; HSPs: 8)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 48 - 281
Target Start/End: Original strand, 46187695 - 46187936
Alignment:
Q  48 gaagtgaatcctataaatgatgtgtgtggcttcacaaatggatttgtcgacaggagagttgctggtaatggtggtgggtg-------agagagacatgga 140  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||       |||||||||||||    
T  46187695 gaagtgaattctataaatgatgtgtgtggcttcacaaatggatttttcgacagaagagttgctggtagtggtggtgggtggtgggtgagagagacatgga 46187794  T
Q  141 ggagagagaatggcaggtggtgtgnnnnnnntct-aatgttgagagtctatgataagacaatgttctttgcttaatttagtggttaaaattgactttcct 239  Q
     ||| |||||||||| ||||||||         | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||     
T  46187795 agagggagaatggcaagtggtgtggaaaaaaattcaatgttgagagtctatgataagacaatgttctttgcttaatctagtggttaaaattgactctccc 46187894  T
Q  240 atggtgagaaagttttatcctttcccatgtaaaatgccacct 281  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  46187895 atggtgagaaagttttatcctttcccatgtgaaatgccacct 46187936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 177 - 280
Target Start/End: Original strand, 45529392 - 45529495
Alignment:
Q  177 tgttgagagtctatgataagacaatgttctttgcttaatttagtggttaaaattgactttcctatggtgagaaagttttatcctttcccatgtaaaatgc 276  Q
    ||||||||||||||||||| | |||||||||| ||| ||||||||||||||||| ||||||| || | | |||| |||||| |||||| |||| ||||||    
T  45529392 tgttgagagtctatgataacataatgttctttacttgatttagtggttaaaattaactttcccatagcgggaaacttttatgctttcctatgttaaatgc 45529491  T
Q  277 cacc 280  Q
    ||||    
T  45529492 cacc 45529495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 172 - 280
Target Start/End: Original strand, 55125267 - 55125375
Alignment:
Q  172 tctaatgttgagagtctatgataagacaatgttctttgcttaatttagtggttaaaattgactttcctatggtgagaaagttttatcctttcccatgtaa 271  Q
    |||| |||||||||| ||  ||||||||||||||||| |||||| || ||| ||||||| ||||| |||||||| |||| | || ||| || |||||  |    
T  55125267 tctagtgttgagagtgtaccataagacaatgttctttacttaatctaatggataaaatttacttttctatggtgggaaactattgtccatttccatgcta 55125366  T
Q  272 aatgccacc 280  Q
    |||||||||    
T  55125367 aatgccacc 55125375  T

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Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 233 - 280
Target Start/End: Complemental strand, 46187195 - 46187148
Alignment:
Q  233 ctttcctatggtgagaaagttttatcctttcccatgtaaaatgccacc 280  Q
    ||||||||||||| ||||||||||  ||||||||||| ||||||||||    
T  46187195 ctttcctatggtgggaaagttttacactttcccatgtgaaatgccacc 46187148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 116 - 147
Target Start/End: Complemental strand, 46187316 - 46187285
Alignment:
Q  116 tggtggtgggtgagagagacatggaggagaga 147  Q
    ||||||||||||||||||||||||||||||||    
T  46187316 tggtggtgggtgagagagacatggaggagaga 46187285  T

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Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 232 - 282
Target Start/End: Original strand, 13810598 - 13810648
Alignment:
Q  232 actttcctatggtgagaaagttttatcctttcccatgtaaaatgccacctt 282  Q
    |||||||||| ||| |||||||||| |||||||||||| ||||| ||||||    
T  13810598 actttcctatcgtgggaaagttttaccctttcccatgttaaatgtcacctt 13810648  T

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Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 234 - 280
Target Start/End: Original strand, 48219275 - 48219321
Alignment:
Q  234 tttcctatggtgagaaagttttatcctttcccatgtaaaatgccacc 280  Q
    ||||| ||||||||||||  ||| |||||||||||||||||||||||    
T  48219275 tttcccatggtgagaaagaattaacctttcccatgtaaaatgccacc 48219321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 232 - 284
Target Start/End: Complemental strand, 37374013 - 37373961
Alignment:
Q  232 actttcctatggtgagaaagttttatcctttcccatgtaaaatgccaccttat 284  Q
    ||||||| |||||| ||||   ||| |||||||||||||||||||||||||||    
T  37374013 actttcccatggtgggaaaagattaacctttcccatgtaaaatgccaccttat 37373961  T

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Target: chr1 (Bit Score: 133; Significance: 6e-69; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 48 - 232
Target Start/End: Original strand, 29148752 - 29148939
Alignment:
Q  48 gaagtgaatcctataaatgatgtgtgtggcttcacaaatggatttgtcgacaggagagttgctggtaatggtggtgggtgagagagacatggaggagaga 147  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  29148752 gaagtgaatcctataaatgatgtgtgtggcttcacaaatggatttgtcgacaggagagttgccggtagtggtggtgggtgagagagacatggaggagaga 29148851  T
Q  148 gaatggcaggtggtgtg---nnnnnnntctaatgttgagagtctatgataagacaatgttctttgcttaatttagtggttaaaattga 232  Q
    |||||||||||||||||          |  ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  29148852 gaatggcaggtggtgtggaaaaaaaaattcaatgttgagagtctatgataagacaatgttctttgcttaatctagtggttaaaattga 29148939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 201 - 281
Target Start/End: Complemental strand, 13361682 - 13361602
Alignment:
Q  201 tgttctttgcttaatttagtggttaaaattgactttcctatggtgagaaagttttatcctttcccatgtaaaatgccacct 281  Q
    |||||||| ||| || | |||||| ||||| ||||||| |||||| |||||||||| ||||||| || | |||||||||||    
T  13361682 tgttctttacttgatctggtggttcaaattaactttcccatggtgggaaagttttaccctttcctatattaaatgccacct 13361602  T

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Target: chr1; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 117 - 147
Target Start/End: Complemental strand, 29148328 - 29148298
Alignment:
Q  117 ggtggtgggtgagagagacatggaggagaga 147  Q
    |||||||||||||||||||||||||||||||    
T  29148328 ggtggtgggtgagagagacatggaggagaga 29148298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 192 - 237
Target Start/End: Complemental strand, 9429853 - 9429808
Alignment:
Q  192 ataagacaatgttctttgcttaatttagtggttaaaattgactttc 237  Q
    ||||||||||||||||| ||||||||| ||| ||||||| ||||||    
T  9429853 ataagacaatgttctttacttaatttaatggataaaatttactttc 9429808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 177 - 281
Target Start/End: Original strand, 11032164 - 11032268
Alignment:
Q  177 tgttgagagtctatgataagacaatgttctttgcttaatttagtggttaaaattgactttcctatggtgagaaagttttatcctttcccatgtaaaatgc 276  Q
    ||||||||||| |||||||||   ||||| || |||||| || |||| ||| |  ||||||| |||||| |||| | ||  |||||||||||| ||||||    
T  11032164 tgttgagagtccatgataagaatgtgttcattacttaatctaatggtcaaattcaactttcccatggtgggaaactattcccctttcccatgttaaatgc 11032263  T
Q  277 cacct 281  Q
    |||||    
T  11032264 cacct 11032268  T

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Target: chr4 (Bit Score: 38; Significance: 0.000000000003; HSPs: 9)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 220 - 269
Target Start/End: Original strand, 37114584 - 37114633
Alignment:
Q  220 tggttaaaattgactttcctatggtgagaaagttttatcctttcccatgt 269  Q
    |||||||||||||||||  ||||||| |||||||||||||||||||||||    
T  37114584 tggttaaaattgacttttttatggtgggaaagttttatcctttcccatgt 37114633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 172 - 268
Target Start/End: Original strand, 6680282 - 6680378
Alignment:
Q  172 tctaatgttgagagtctatgataagacaatgttctttgcttaatttagtggttaaaattgactttcctatggtgagaaagttttatcctttcccatg 268  Q
    |||| |||||||| |||||||||| || ||||||||| |||||| || |||| || ||| ||||||| ||||||||||| | ||  |||||||||||    
T  6680282 tctagtgttgagaatctatgataaaactatgttctttacttaatctaatggtcaatatttactttcccatggtgagaaactctttccctttcccatg 6680378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 177 - 282
Target Start/End: Original strand, 7988228 - 7988333
Alignment:
Q  177 tgttgagagtctatgataagacaatgttctttgcttaatttagtggttaaaattgactttcctatggtgagaaagttttatcctttcccatgtaaaatgc 276  Q
    ||||||||| ||||||||| |  |||||| || |||||| || ||||  |||   ||||||||||||||||||||  ||  |||||||||||| ||||||    
T  7988228 tgttgagagactatgataatattatgttccttacttaatctaatggtccaaaaaaactttcctatggtgagaaaggatttccctttcccatgttaaatgc 7988327  T
Q  277 cacctt 282  Q
    ||||||    
T  7988328 cacctt 7988333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 179 - 283
Target Start/End: Original strand, 50056906 - 50057010
Alignment:
Q  179 ttgagagtctatgataagacaatgttctttgcttaatttagtggttaaaattgactttcctatggtgagaaagttttatcctttcccatgtaaaatgcca 278  Q
    ||||||||||| | |||||||  ||||||| ||| || |||||||| ||||| ||||||  ||| || |||| | ||||| |||||||||| ||||| ||    
T  50056906 ttgagagtctacggtaagacagcgttctttacttgatctagtggttcaaattaactttctcatgatgggaaaatattatcatttcccatgttaaatgtca 50057005  T
Q  279 cctta 283  Q
    |||||    
T  50057006 cctta 50057010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 177 - 280
Target Start/End: Complemental strand, 43079263 - 43079160
Alignment:
Q  177 tgttgagagtctatgataagacaatgttctttgcttaatttagtggttaaaattgactttcctatggtgagaaagttttatcctttcccatgtaaaatgc 276  Q
    ||||||||||  |||||||||| ||||||||| ||| || || ||| ||||||| ||||||| || |||  |||   || ||||||||||||| ||||||    
T  43079263 tgttgagagtgcatgataagactatgttctttacttgatctaatggataaaattaactttcccattgtggaaaaagattgtcctttcccatgtgaaatgc 43079164  T
Q  277 cacc 280  Q
    ||||    
T  43079163 cacc 43079160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 233 - 287
Target Start/End: Complemental strand, 39844943 - 39844889
Alignment:
Q  233 ctttcctatggtgagaaagttttatcctttcccatgtaaaatgccaccttatttg 287  Q
    ||||||||||||| |||||  ||  |||||||||||| |||||||||||||||||    
T  39844943 ctttcctatggtgggaaaggattcccctttcccatgtgaaatgccaccttatttg 39844889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 232 - 282
Target Start/End: Complemental strand, 52720645 - 52720595
Alignment:
Q  232 actttcctatggtgagaaagttttatcctttcccatgtaaaatgccacctt 282  Q
    |||||||||||||| ||| ||||||| | ||||||||| ||||||||||||    
T  52720645 actttcctatggtgggaatgttttataccttcccatgtgaaatgccacctt 52720595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 232 - 281
Target Start/End: Original strand, 25370430 - 25370479
Alignment:
Q  232 actttcctatggtgagaaagttttatcctttcccatgtaaaatgccacct 281  Q
    ||||||| |||||| |||||  ||| ||||||||||||||||||||||||    
T  25370430 actttcccatggtgggaaaggattaacctttcccatgtaaaatgccacct 25370479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 232 - 281
Target Start/End: Original strand, 52597749 - 52597798
Alignment:
Q  232 actttcctatggtgagaaagttttatcctttcccatgtaaaatgccacct 281  Q
    ||||||||||||||| ||||  ||| |||||||||||| |||||||||||    
T  52597749 actttcctatggtgaaaaaggattaacctttcccatgtgaaatgccacct 52597798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0455 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0455
Description:

Target: scaffold0455; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 76 - 164
Target Start/End: Complemental strand, 12523 - 12436
Alignment:
Q  76 gcttcacaaatggatttgtcgacaggagagttgctggtaatggtggtgggtgagagagacatggaggagagagaatggcaggtggtgtg 164  Q
    |||||||||||  |||||| || |||| ||||||||||  ||||||||| ||||||||||||||||||| |||||| |  |||||||||    
T  12523 gcttcacaaatcaatttgttgaaaggaaagttgctggttgtggtggtgg-tgagagagacatggaggagggagaatagttggtggtgtg 12436  T

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Target: chr6 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 76 - 164
Target Start/End: Complemental strand, 28134487 - 28134400
Alignment:
Q  76 gcttcacaaatggatttgtcgacaggagagttgctggtaatggtggtgggtgagagagacatggaggagagagaatggcaggtggtgtg 164  Q
    |||||||||||  |||||| || |||| ||||||||||  ||||||||| ||||||||||||||||||| |||||| |  |||||||||    
T  28134487 gcttcacaaatcaatttgttgaaaggaaagttgctggttgtggtggtgg-tgagagagacatggaggagggagaatagttggtggtgtg 28134400  T

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Target: scaffold0181 (Bit Score: 36; Significance: 0.00000000005; HSPs: 2)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 236 - 287
Target Start/End: Complemental strand, 15122 - 15071
Alignment:
Q  236 tcctatggtgagaaagttttatcctttcccatgtaaaatgccaccttatttg 287  Q
    |||||||||| |||||||||| |||||||||||| ||||||||||| |||||    
T  15122 tcctatggtgggaaagttttaccctttcccatgttaaatgccacctgatttg 15071  T

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Target: scaffold0181; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 281
Target Start/End: Original strand, 15901 - 15960
Alignment:
Q  222 gttaaaattgactttcctatggtgagaaagttttatcctttcccatgtaaaatgccacct 281  Q
    ||||| ||| ||||||| || ||| |||||||||| |||||||||||| |||||||||||    
T  15901 gttaatattaactttcccatagtgggaaagttttaccctttcccatgttaaatgccacct 15960  T

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Target: chr7 (Bit Score: 33; Significance: 0.000000003; HSPs: 4)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 172 - 280
Target Start/End: Original strand, 12732780 - 12732888
Alignment:
Q  172 tctaatgttgagagtctatgataagacaatgttctttgcttaatttagtggttaaaattgactttcctatggtgagaaagttttatcctttcccatgtaa 271  Q
    |||| |||||||||| ||  ||||||||||||||||| |||||| || ||| ||||||| ||||||  |||||| |||| | || ||| || |||||  |    
T  12732780 tctagtgttgagagtgtaccataagacaatgttctttacttaatctaatggataaaatttactttctcatggtgggaaactattgtccatttccatgcta 12732879  T
Q  272 aatgccacc 280  Q
    |||||||||    
T  12732880 aatgccacc 12732888  T

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Target: chr7; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 268
Target Start/End: Complemental strand, 12732353 - 12732259
Alignment:
Q  174 taatgttgagagtctatgataagacaatgttctttgcttaatttagtggttaaaattgactttcctatggtgagaaagttttatcctttcccatg 268  Q
    |||||||||||||||||||||| || ||||||||| | | || || |||| || ||| ||||||| |||||| |||| | ||  |||||||||||    
T  12732353 taatgttgagagtctatgataaaactatgttctttacatgatctaatggtcaatatttactttcccatggtgggaaactctttccctttcccatg 12732259  T

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Target: chr7; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 250
Target Start/End: Original strand, 27600040 - 27600113
Alignment:
Q  177 tgttgagagtctatgataagacaatgttctttgcttaatttagtggttaaaattgactttcctatggtgagaaa 250  Q
    |||||||||||||||||||||   ||||| || |||||| ||||||| ||| || ||||||| |||||| ||||    
T  27600040 tgttgagagtctatgataagaatgtgttcattacttaatctagtggtcaaatttaactttcccatggtgggaaa 27600113  T

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Target: chr7; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 225 - 282
Target Start/End: Original strand, 48881053 - 48881110
Alignment:
Q  225 aaaattgactttcctatggtgagaaagttttatcctttcccatgtaaaatgccacctt 282  Q
    |||||| ||| |||||||||| |||||  ||| ||||| |||||||||||||||||||    
T  48881053 aaaattaactgtcctatggtgggaaaggattaaccttttccatgtaaaatgccacctt 48881110  T

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Target: chr8 (Bit Score: 31; Significance: 0.00000004; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 172 - 250
Target Start/End: Original strand, 42915750 - 42915828
Alignment:
Q  172 tctaatgttgagagtctatgataagacaatgttctttgcttaatttagtggttaaaattgactttcctatggtgagaaa 250  Q
    |||| |||| |||||||||||||| || |||||||||  |||||||| | || |||||  |||||||||||||| ||||    
T  42915750 tctagtgttaagagtctatgataataccatgttctttatttaatttaatagtcaaaatcaactttcctatggtgggaaa 42915828  T

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Target: chr8; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 220 - 268
Target Start/End: Complemental strand, 37562355 - 37562307
Alignment:
Q  220 tggttaaaattgactttcctatggtgagaaagttttatcctttcccatg 268  Q
    |||||||||||||||||||||||||| ||||   || ||||||||||||    
T  37562355 tggttaaaattgactttcctatggtgggaaacaattctcctttcccatg 37562307  T

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Target: chr2 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 232 - 281
Target Start/End: Complemental strand, 28223836 - 28223787
Alignment:
Q  232 actttcctatggtgagaaagttttatcctttcccatgtaaaatgccacct 281  Q
    |||||||||||||| |||||  ||| |||||||||||| |||||||||||    
T  28223836 actttcctatggtgggaaaggattaacctttcccatgtgaaatgccacct 28223787  T

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