View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1172_low_153 (Length: 252)

Name: NF1172_low_153
Description: NF1172
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1172_low_153
NF1172_low_153
[»] scaffold0009 (2 HSPs)
scaffold0009 (73-194)||(49502-49623)
scaffold0009 (135-191)||(49579-49635)
[»] chr5 (38 HSPs)
chr5 (73-194)||(36563550-36563671)
chr5 (73-192)||(41989419-41989538)
chr5 (73-191)||(11795168-11795286)
chr5 (73-191)||(9395350-9395468)
chr5 (69-197)||(13033045-13033173)
chr5 (73-193)||(37148967-37149087)
chr5 (73-192)||(23359941-23360060)
chr5 (73-197)||(13103018-13103142)
chr5 (73-194)||(17025621-17025742)
chr5 (81-193)||(582987-583099)
chr5 (73-193)||(20848072-20848191)
chr5 (73-191)||(26350362-26350480)
chr5 (73-193)||(37641951-37642072)
chr5 (78-194)||(4443957-4444073)
chr5 (73-167)||(21575970-21576064)
chr5 (73-170)||(6126845-6126942)
chr5 (120-192)||(38361750-38361822)
chr5 (69-167)||(2366346-2366444)
chr5 (103-197)||(13539909-13539997)
chr5 (78-142)||(35904448-35904510)
chr5 (73-177)||(3549559-3549663)
chr5 (63-184)||(36595776-36595894)
chr5 (93-156)||(39030585-39030648)
chr5 (76-192)||(2629559-2629675)
chr5 (145-193)||(13033135-13033183)
chr5 (78-170)||(18167340-18167432)
chr5 (73-128)||(9006894-9006949)
chr5 (145-191)||(23360026-23360072)
chr5 (102-184)||(27080981-27081063)
chr5 (97-191)||(39290775-39290868)
chr5 (102-156)||(40138831-40138885)
chr5 (69-118)||(27081013-27081062)
chr5 (145-194)||(41989404-41989453)
chr5 (145-193)||(9395434-9395482)
chr5 (69-117)||(11795176-11795224)
chr5 (145-193)||(13103108-13103156)
chr5 (69-117)||(26350424-26350472)
chr5 (69-117)||(36563612-36563660)
[»] chr3 (41 HSPs)
chr3 (73-193)||(4238592-4238712)
chr3 (73-193)||(22721929-22722049)
chr3 (73-193)||(38964390-38964510)
chr3 (78-194)||(44785413-44785529)
chr3 (73-192)||(19557064-19557183)
chr3 (73-192)||(49823393-49823512)
chr3 (73-191)||(10297979-10298097)
chr3 (73-194)||(8817398-8817519)
chr3 (73-193)||(21295338-21295458)
chr3 (73-193)||(34080042-34080162)
chr3 (73-195)||(9111506-9111628)
chr3 (73-191)||(17653712-17653830)
chr3 (73-191)||(37508921-37509039)
chr3 (73-191)||(48340397-48340515)
chr3 (73-193)||(2787844-2787964)
chr3 (73-193)||(8437423-8437543)
chr3 (73-193)||(40691008-40691128)
chr3 (73-193)||(42507367-42507487)
chr3 (73-192)||(46208029-46208148)
chr3 (73-191)||(51406673-51406791)
chr3 (73-193)||(42170358-42170478)
chr3 (78-192)||(36095697-36095811)
chr3 (69-184)||(33942940-33943055)
chr3 (73-175)||(6013348-6013450)
chr3 (69-179)||(35513485-35513595)
chr3 (73-194)||(9213513-9213634)
chr3 (106-180)||(43323071-43323145)
chr3 (69-194)||(26019488-26019612)
chr3 (108-152)||(8951943-8951987)
chr3 (145-200)||(17653796-17653851)
chr3 (97-182)||(29285796-29285879)
chr3 (69-156)||(5323241-5323329)
chr3 (92-184)||(8092595-8092687)
chr3 (93-157)||(30443762-30443826)
chr3 (145-192)||(4238678-4238725)
chr3 (136-179)||(33128218-33128261)
chr3 (145-192)||(37509005-37509052)
chr3 (145-192)||(46208114-46208161)
chr3 (145-191)||(21295326-21295372)
chr3 (145-194)||(10298063-10298112)
chr3 (145-194)||(40690993-40691042)
[»] chr8 (38 HSPs)
chr8 (73-192)||(43199366-43199485)
chr8 (73-191)||(12343152-12343270)
chr8 (73-193)||(54624-54744)
chr8 (73-193)||(2890174-2890294)
chr8 (73-193)||(7785790-7785910)
chr8 (73-192)||(25601012-25601131)
chr8 (73-191)||(6552655-6552773)
chr8 (73-193)||(7805711-7805831)
chr8 (73-191)||(3304290-3304408)
chr8 (73-191)||(39571215-39571333)
chr8 (73-191)||(44498199-44498317)
chr8 (78-191)||(15888369-15888482)
chr8 (73-193)||(33289273-33289393)
chr8 (73-192)||(12763666-12763785)
chr8 (73-192)||(32211375-32211494)
chr8 (73-191)||(31654613-31654731)
chr8 (73-191)||(32114487-32114605)
chr8 (73-191)||(7012171-7012289)
chr8 (78-192)||(13578856-13578970)
chr8 (190-252)||(39917959-39918021)
chr8 (129-194)||(4245649-4245714)
chr8 (78-191)||(8587170-8587283)
chr8 (78-186)||(17006916-17007024)
chr8 (78-186)||(17570223-17570331)
chr8 (73-196)||(24691991-24692113)
chr8 (69-188)||(28463614-28463733)
chr8 (73-142)||(27422239-27422308)
chr8 (69-156)||(13246802-13246889)
chr8 (78-193)||(33057592-33057707)
chr8 (134-184)||(13246801-13246851)
chr8 (78-180)||(24202990-24203092)
chr8 (73-117)||(8587182-8587226)
chr8 (137-193)||(27422266-27422322)
chr8 (69-192)||(25600999-25601122)
chr8 (145-195)||(39571199-39571249)
chr8 (145-193)||(7785776-7785824)
chr8 (73-117)||(28463623-28463667)
chr8 (96-176)||(28999083-28999163)
[»] chr4 (42 HSPs)
chr4 (73-192)||(47838629-47838748)
chr4 (73-193)||(47833609-47833729)
chr4 (73-191)||(5986876-5986994)
chr4 (69-191)||(24704370-24704492)
chr4 (73-193)||(3372119-3372239)
chr4 (73-193)||(42797730-42797850)
chr4 (73-193)||(48336261-48336381)
chr4 (73-192)||(3904695-3904814)
chr4 (78-193)||(3992974-3993089)
chr4 (73-191)||(6121905-6122023)
chr4 (73-191)||(20538698-20538816)
chr4 (73-191)||(53337370-53337488)
chr4 (78-192)||(7579309-7579423)
chr4 (73-191)||(46797725-46797843)
chr4 (73-194)||(41469778-41469899)
chr4 (73-194)||(43900546-43900667)
chr4 (73-193)||(51894594-51894714)
chr4 (73-191)||(52756675-52756793)
chr4 (80-192)||(33551200-33551312)
chr4 (73-177)||(33621810-33621914)
chr4 (80-192)||(26231576-26231688)
chr4 (73-179)||(3422073-3422178)
chr4 (73-192)||(40913201-40913320)
chr4 (73-181)||(41615688-41615796)
chr4 (95-192)||(25855082-25855179)
chr4 (97-179)||(29845657-29845739)
chr4 (78-176)||(50430435-50430533)
chr4 (78-177)||(17344227-17344326)
chr4 (137-192)||(24704446-24704501)
chr4 (137-191)||(4780371-4780425)
chr4 (113-185)||(17236839-17236912)
chr4 (95-176)||(31013036-31013117)
chr4 (73-142)||(45725905-45725974)
chr4 (73-128)||(4780358-4780413)
chr4 (69-132)||(45478151-45478214)
chr4 (145-191)||(42797816-42797862)
chr4 (145-193)||(3422144-3422192)
chr4 (69-128)||(6422530-6422590)
chr4 (73-117)||(17236862-17236906)
chr4 (145-193)||(41469764-41469812)
chr4 (145-193)||(47838615-47838663)
chr4 (69-117)||(47838691-47838739)
[»] chr7 (26 HSPs)
chr7 (73-195)||(46840856-46840978)
chr7 (78-194)||(1565746-1565862)
chr7 (73-193)||(1738459-1738579)
chr7 (73-193)||(7240747-7240867)
chr7 (73-192)||(38063925-38064044)
chr7 (69-191)||(36583395-36583517)
chr7 (78-191)||(31319416-31319529)
chr7 (73-193)||(9268754-9268874)
chr7 (73-192)||(7482224-7482343)
chr7 (69-191)||(94326-94448)
chr7 (73-191)||(23314151-23314269)
chr7 (73-193)||(22285697-22285817)
chr7 (73-191)||(36016208-36016326)
chr7 (73-191)||(38441460-38441578)
chr7 (73-192)||(28536763-28536882)
chr7 (73-192)||(4790247-4790366)
chr7 (73-175)||(33418392-33418494)
chr7 (73-194)||(9575406-9575527)
chr7 (73-185)||(40840131-40840243)
chr7 (73-191)||(7269417-7269535)
chr7 (145-193)||(36583479-36583527)
chr7 (145-191)||(94318-94364)
chr7 (145-193)||(1738445-1738493)
chr7 (92-128)||(6803328-6803364)
chr7 (145-193)||(7240833-7240881)
chr7 (145-193)||(7482309-7482357)
[»] chr2 (38 HSPs)
chr2 (73-194)||(41478651-41478772)
chr2 (67-192)||(44397546-44397671)
chr2 (73-193)||(37990025-37990145)
chr2 (73-192)||(3055557-3055676)
chr2 (73-192)||(15896841-15896960)
chr2 (73-192)||(44398685-44398804)
chr2 (73-191)||(13197722-13197840)
chr2 (73-192)||(16243795-16243914)
chr2 (73-192)||(38917534-38917653)
chr2 (73-191)||(6648531-6648649)
chr2 (73-191)||(16044329-16044447)
chr2 (73-191)||(37666622-37666740)
chr2 (73-194)||(13344481-13344602)
chr2 (80-192)||(4683951-4684063)
chr2 (73-193)||(15372224-15372344)
chr2 (73-192)||(9047767-9047886)
chr2 (73-191)||(12337949-12338067)
chr2 (73-189)||(30099194-30099310)
chr2 (69-191)||(12170407-12170529)
chr2 (73-179)||(41492908-41493014)
chr2 (73-163)||(44804590-44804680)
chr2 (73-170)||(16734804-16734901)
chr2 (101-160)||(41453090-41453149)
chr2 (111-185)||(31150659-31150733)
chr2 (145-199)||(3055642-3055696)
chr2 (95-179)||(13724136-13724220)
chr2 (73-117)||(23227346-23227390)
chr2 (145-193)||(41492894-41492942)
chr2 (63-193)||(14740465-14740596)
chr2 (145-194)||(37990010-37990059)
chr2 (82-155)||(45294360-45294432)
chr2 (120-176)||(4553069-4553125)
chr2 (145-193)||(6648517-6648565)
chr2 (145-193)||(9047753-9047801)
chr2 (102-186)||(16561042-16561126)
chr2 (93-157)||(31469093-31469157)
chr2 (73-117)||(40714016-40714060)
chr2 (145-193)||(41478637-41478685)
[»] chr6 (29 HSPs)
chr6 (73-193)||(8382981-8383101)
chr6 (73-192)||(2830334-2830453)
chr6 (73-192)||(11572157-11572276)
chr6 (73-191)||(6330115-6330233)
chr6 (73-191)||(26602323-26602441)
chr6 (73-193)||(13853605-13853725)
chr6 (73-193)||(33052806-33052926)
chr6 (73-192)||(8099529-8099648)
chr6 (78-192)||(6143553-6143667)
chr6 (73-192)||(35031013-35031132)
chr6 (73-191)||(9644696-9644814)
chr6 (73-191)||(9650713-9650831)
chr6 (73-193)||(6068564-6068684)
chr6 (73-193)||(8417805-8417925)
chr6 (73-175)||(28747146-28747248)
chr6 (99-191)||(13043758-13043850)
chr6 (73-161)||(17992018-17992106)
chr6 (73-191)||(22896471-22896580)
chr6 (78-193)||(3788034-3788150)
chr6 (95-179)||(6068974-6069058)
chr6 (72-192)||(7596988-7597108)
chr6 (78-170)||(6549904-6549995)
chr6 (95-179)||(14936491-14936575)
chr6 (135-192)||(3788111-3788168)
chr6 (145-194)||(8099614-8099663)
chr6 (145-194)||(9644780-9644829)
chr6 (145-194)||(9650797-9650846)
chr6 (69-117)||(6143562-6143610)
chr6 (145-193)||(26602407-26602455)
[»] chr1 (37 HSPs)
chr1 (73-193)||(27159370-27159490)
chr1 (73-193)||(44668105-44668225)
chr1 (73-192)||(9981646-9981765)
chr1 (73-195)||(14984833-14984955)
chr1 (73-191)||(31842807-31842925)
chr1 (73-191)||(39401978-39402096)
chr1 (73-194)||(11795930-11796051)
chr1 (78-191)||(47216716-47216829)
chr1 (73-193)||(12483640-12483760)
chr1 (73-193)||(26471077-26471197)
chr1 (78-192)||(34042695-34042809)
chr1 (73-191)||(44955218-44955336)
chr1 (73-191)||(1050888-1051006)
chr1 (81-191)||(23278021-23278131)
chr1 (73-191)||(47777493-47777611)
chr1 (78-193)||(47588354-47588469)
chr1 (73-193)||(25694317-25694437)
chr1 (73-192)||(17556751-17556871)
chr1 (73-185)||(47969700-47969813)
chr1 (73-192)||(11897053-11897172)
chr1 (78-192)||(16448125-16448239)
chr1 (73-176)||(12213486-12213589)
chr1 (73-181)||(11989791-11989899)
chr1 (67-191)||(37552141-37552265)
chr1 (69-142)||(1598390-1598461)
chr1 (78-157)||(571542-571620)
chr1 (145-195)||(11897138-11897188)
chr1 (93-157)||(3739838-3739902)
chr1 (73-193)||(12483626-12483746)
chr1 (137-192)||(37552217-37552272)
chr1 (73-156)||(48050938-48051021)
chr1 (80-126)||(5392211-5392257)
chr1 (97-155)||(29855084-29855142)
chr1 (99-168)||(11774536-11774605)
chr1 (97-182)||(12043613-12043697)
chr1 (145-193)||(14984921-14984969)
chr1 (145-185)||(44955212-44955252)
[»] scaffold0482 (1 HSPs)
scaffold0482 (73-193)||(12858-12978)
[»] scaffold0204 (1 HSPs)
scaffold0204 (73-193)||(23783-23903)
[»] scaffold1707 (1 HSPs)
scaffold1707 (73-192)||(1334-1453)
[»] scaffold0464 (1 HSPs)
scaffold0464 (73-191)||(6143-6261)
[»] scaffold0011 (1 HSPs)
scaffold0011 (73-191)||(231315-231433)
[»] scaffold0650 (1 HSPs)
scaffold0650 (96-157)||(20-81)
[»] scaffold0415 (1 HSPs)
scaffold0415 (97-179)||(13761-13844)
[»] scaffold0003 (1 HSPs)
scaffold0003 (78-162)||(312747-312831)


Alignment Details
Target: scaffold0009 (Bit Score: 106; Significance: 4e-53; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 73 - 194
Target Start/End: Complemental strand, 49623 - 49502
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  49623 tcctatttataagagaattttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttata 49524  T
Q  173 aataggatcggaggtagtattt 194  Q
    ||||||| ||||||||||||||    
T  49523 aataggaccggaggtagtattt 49502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 191
Target Start/End: Original strand, 49579 - 49635
Alignment:
Q  135 aaatacattcacttttgttgacctaaatttctcttacaaataggatcggaggtagta 191  Q
    ||||||||  ||||||||||||| ||| |||||||| |||||||| |||||| ||||    
T  49579 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 49635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 106; Significance: 4e-53; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 73 - 194
Target Start/End: Original strand, 36563550 - 36563671
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  36563550 tcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttata 36563649  T
Q  173 aataggatcggaggtagtattt 194  Q
    ||||||||||||||||||||||    
T  36563650 aataggatcggaggtagtattt 36563671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 73 - 192
Target Start/End: Original strand, 41989419 - 41989538
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41989419 tcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 41989518  T
Q  173 aataggatcggaggtagtat 192  Q
    ||||||| ||||||||||||    
T  41989519 aataggaccggaggtagtat 41989538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 73 - 191
Target Start/End: Complemental strand, 11795286 - 11795168
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  11795286 tcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttata 11795187  T
Q  173 aataggatcggaggtagta 191  Q
    |||||||||||||||||||    
T  11795186 aataggatcggaggtagta 11795168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 73 - 191
Target Start/End: Complemental strand, 9395468 - 9395350
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  9395468 tcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttata 9395369  T
Q  173 aataggatcggaggtagta 191  Q
    ||||||| |||||||||||    
T  9395368 aataggaccggaggtagta 9395350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 69 - 197
Target Start/End: Complemental strand, 13033173 - 13033045
Alignment:
Q  69 ccgatcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctct 168  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||    
T  13033173 ccgatcctatttataagagaattttgggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttctct 13033074  T
Q  169 tacaaataggatcggaggtagtatttgaa 197  Q
    || |||||||| |||||| ||||| ||||    
T  13033073 tataaataggaccggaggaagtatgtgaa 13033045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 73 - 193
Target Start/End: Original strand, 37148967 - 37149087
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| ||||||| |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  37148967 tcctatttataatagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttata 37149066  T
Q  173 aataggatcggaggtagtatt 193  Q
    ||||||| |||||||||||||    
T  37149067 aataggaccggaggtagtatt 37149087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 73 - 192
Target Start/End: Complemental strand, 23360060 - 23359941
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  23360060 tcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttata 23359961  T
Q  173 aataggatcggaggtagtat 192  Q
    ||||||| | ||||||||||    
T  23359960 aataggaccagaggtagtat 23359941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 73 - 197
Target Start/End: Complemental strand, 13103142 - 13103018
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  13103142 tcctatttataagagaattttgggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttata 13103043  T
Q  173 aataggatcggaggtagtatttgaa 197  Q
    ||||||| |||||| ||||| ||||    
T  13103042 aataggaccggaggaagtatgtgaa 13103018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 73 - 194
Target Start/End: Complemental strand, 17025742 - 17025621
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||  |||||||||||||||||| ||||||||||||||||| |    
T  17025742 tcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtttaaatacattcacttttgtggacctaaatttctcttata 17025643  T
Q  173 aataggatcggaggtagtattt 194  Q
    ||||||| ||||||||||||||    
T  17025642 aataggaccggaggtagtattt 17025621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 81 - 193
Target Start/End: Complemental strand, 583099 - 582987
Alignment:
Q  81 ataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttacaaataggat 180  Q
    |||| |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||     
T  583099 ataaaagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttatgttgacctaaatttctcttataaataggac 583000  T
Q  181 cggaggtagtatt 193  Q
    |||||||||||||    
T  582999 cggaggtagtatt 582987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 73 - 193
Target Start/End: Complemental strand, 20848191 - 20848072
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||||||| || |||||||| ||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| |    
T  20848191 tcctatttataagagaattttggg-caacaaaaattgatgtatctagttaaaaattcagtccaaatacattcacttttattgacctaaatttctcttata 20848093  T
Q  173 aataggatcggaggtagtatt 193  Q
    ||||||| |||||||||||||    
T  20848092 aataggaccggaggtagtatt 20848072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 73 - 191
Target Start/End: Original strand, 26350362 - 26350480
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| ||||||| ||||||||   |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  26350362 tcctatttataaaagaattttgaatcaataaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttata 26350461  T
Q  173 aataggatcggaggtagta 191  Q
    |||||||||||||| ||||    
T  26350462 aataggatcggagggagta 26350480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 73 - 193
Target Start/End: Complemental strand, 37642072 - 37641951
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcac-ttttgttgacctaaatttctcttac 171  Q
    |||| |||||||||||||||| |||||| |||||||||||||| ||||||||||||||||||| |||||||||| |||| |||||||||||||||||||     
T  37642072 tcctatttataagagaattttgggtcaataaaagttgatgtatctagttaaaaattcagtccacatacattcactttttattgacctaaatttctcttat 37641973  T
Q  172 aaataggatcggaggtagtatt 193  Q
    |||||||| |||||||||||||    
T  37641972 aaataggaccggaggtagtatt 37641951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 78 - 194
Target Start/End: Complemental strand, 4444073 - 4443957
Alignment:
Q  78 tttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttacaaatag 177  Q
    |||||||||||||||| | ||||||||||||||||||| || |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||    
T  4444073 tttataagagaattttagatcaacaaaagttgatgtatctatttaaaaattcagtctaaatacattcacttttgttgacctaaatttctcttataaatag 4443974  T
Q  178 gatcggaggtagtattt 194  Q
    || || ||| |||||||    
T  4443973 gaccgaaggaagtattt 4443957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 73 - 167
Target Start/End: Complemental strand, 21576064 - 21575970
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 167  Q
    |||| |||||||||||||||| | ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  21576064 tcctatttataagagaattttggatcaacaaaagttgatgtatctaattaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 21575970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 73 - 170
Target Start/End: Complemental strand, 6126942 - 6126845
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctctta 170  Q
    |||| |||||||||||||||| ||||||||||||||||||||| |||||||||||| |||||||||||||||| ||||||||| ||||||||||||||    
T  6126942 tcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaatttagtccaaatacattcatttttgttgatctaaatttctctta 6126845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 120 - 192
Target Start/End: Original strand, 38361750 - 38361822
Alignment:
Q  120 ttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttacaaataggatcggaggtagtat 192  Q
    ||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||| |||||    
T  38361750 ttaaaaattcagtccaaatacattcacttttattgacctaaatttatcttataaataggatcggaggaagtat 38361822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 69 - 167
Target Start/End: Original strand, 2366346 - 2366444
Alignment:
Q  69 ccgatcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 167  Q
    ||||| || |||||||||||| ||| ||||||||| |||| |||||||| ||||||| ||||||||||||||||  |||||| || ||| || ||||||    
T  2366346 ccgattctatttataagagaaatttgggtcaacaagagttcatgtatttggttaaaatttcagtccaaatacatcaacttttattaaccaaactttctc 2366444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 103 - 197
Target Start/End: Original strand, 13539909 - 13539997
Alignment:
Q  103 aaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttacaaataggatcggaggtagtatttgaa 197  Q
    ||||||||||||| ||||||||||||||||| ||||  |||    ||||||||||||||||||||||| |||||||| ||||  |||||||||||    
T  13539909 aaagttgatgtatctagttaaaaattcagtctaaatttatt----tttgttgacctaaatttctcttataaataggaccgga--tagtatttgaa 13539997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 78 - 142
Target Start/End: Complemental strand, 35904510 - 35904448
Alignment:
Q  78 tttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacat 142  Q
    ||||| ||||||  ||| ||||||||||||  |||||||||||||||||||||||||||||||||    
T  35904510 tttattagagaaaatttagtcaacaaaagt--atgtatttagttaaaaattcagtccaaatacat 35904448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 73 - 177
Target Start/End: Original strand, 3549559 - 3549663
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||| |||   | ||||||||||||||||||  |||||||||| || ||| ||||||| | ||||||||||  |||| ||||||| |    
T  3549559 tcctatttataagagaaatttatattaacaaaagttgatgtattcggttaaaaatttagaccagatacattaatttttgttgactaaaatatctcttata 3549658  T
Q  173 aatag 177  Q
    |||||    
T  3549659 aatag 3549663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 184
Target Start/End: Original strand, 36595776 - 36595894
Alignment:
Q  63 tactccccgatcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaat 162  Q
    ||||||||| || | ||||||||||||  || ||||||||||| ||||||||| |  |||||||||||||| | |||||||   ||||||||| | ||      
T  36595776 tactccccggtcttatttataagagaaagttaggtcaacaaaaattgatgtatctgattaaaaattcagtctagatacatt---ttttgttgatcaaata 36595872  T
Q  163 ttctcttacaaataggatcgga 184  Q
    |||||||| ||||| |||||||    
T  36595873 ttctcttataaatatgatcgga 36595894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 156
Target Start/End: Original strand, 39030585 - 39030648
Alignment:
Q  93 ttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgac 156  Q
    |||||||||||||||| |||||||| ||||||||||    ||||||||||| ||||||||||||    
T  39030585 ttggtcaacaaaagttaatgtatttggttaaaaatttgtaccaaatacattaacttttgttgac 39030648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 192
Target Start/End: Original strand, 2629559 - 2629675
Alignment:
Q  76 tttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttacaaat 175  Q
    ||||||||||| |  |||  ||||| |||| ||||||||| |||||||||| | ||  || ||||||| |||||||||||||||||| | ||||| |||     
T  2629559 tttttataagaaacatttgagtcaataaaatttgatgtatatagttaaaaaattagatcagatacattaacttttgttgacctaaatatttcttataaac 2629658  T
Q  176 aggatcggaggtagtat 192  Q
    | || |||||| |||||    
T  2629659 aagaccggaggaagtat 2629675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 193
Target Start/End: Original strand, 13033135 - 13033183
Alignment:
Q  145 acttttgttgacctaaatttctcttacaaataggatcggaggtagtatt 193  Q
    ||||||||||||| ||| |||||||| ||||||||||||||| ||||||    
T  13033135 acttttgttgacccaaaattctcttataaataggatcggagggagtatt 13033183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 170
Target Start/End: Complemental strand, 18167432 - 18167340
Alignment:
Q  78 tttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctctta 170  Q
    ||||||||| ||  |||||||||||||| |||| ||||||  ||||||||| | |||| ||||||  | ||||||||| |||| |||||||||    
T  18167432 tttataagaaaaagtttggtcaacaaaaattgacgtatttgattaaaaattaaatccatatacatcaatttttgttgatctaactttctctta 18167340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 73 - 128
Target Start/End: Original strand, 9006894 - 9006949
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaatt 128  Q
    |||| ||||||| ||| |||| ||||||||||||||||||||| ||||| ||||||    
T  9006894 tcctatttataacagacttttaggtcaacaaaagttgatgtatctagttcaaaatt 9006949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 191
Target Start/End: Original strand, 23360026 - 23360072
Alignment:
Q  145 acttttgttgacctaaatttctcttacaaataggatcggaggtagta 191  Q
    ||||||||||||| ||| |||||||| |||||||| |||||||||||    
T  23360026 acttttgttgacccaaaattctcttataaataggaccggaggtagta 23360072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 184
Target Start/End: Original strand, 27080981 - 27081063
Alignment:
Q  102 aaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttacaaataggatcgga 184  Q
    ||||| |||| |||||  ||||||||| ||   ||||||||  |||||||||||||||||| ||||||  |||||||||||||    
T  27080981 aaaagatgatttatttgattaaaaatttagattaaatacatcaacttttgttgacctaaatgtctcttgtaaataggatcgga 27081063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 191
Target Start/End: Complemental strand, 39290868 - 39290775
Alignment:
Q  97 tcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttacaaataggatcggaggtagta 191  Q
    |||||||||||| |||||| || ||||||||| | |||||||||||  | |||||||||||| |  ||||||||  ||||||| |||||| ||||    
T  39290868 tcaacaaaagttaatgtatctaattaaaaatttaatccaaatacatcaatttttgttgacctgatattctctta-taataggaccggagggagta 39290775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 156
Target Start/End: Original strand, 40138831 - 40138885
Alignment:
Q  102 aaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgac 156  Q
    ||||||||||||||||  ||||||||||||| |||||| ||| | ||||||||||    
T  40138831 aaaagttgatgtatttgattaaaaattcagttcaaatatatttatttttgttgac 40138885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 69 - 118
Target Start/End: Complemental strand, 27081062 - 27081013
Alignment:
Q  69 ccgatcctttttataagagaatttttggtcaacaaaagttgatgtattta 118  Q
    |||||||| |||| ||||||  ||| ||||||||||||||||||||||||    
T  27081062 ccgatcctatttacaagagacatttaggtcaacaaaagttgatgtattta 27081013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 145 - 194
Target Start/End: Complemental strand, 41989453 - 41989404
Alignment:
Q  145 acttttgttgacctaaatttctcttacaaataggatcggaggtagtattt 194  Q
    ||||||||||||| ||| |||||||| |||||||| |||||| |||||||    
T  41989453 acttttgttgacccaaaattctcttataaataggaccggagggagtattt 41989404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 193
Target Start/End: Original strand, 9395434 - 9395482
Alignment:
Q  145 acttttgttgacctaaatttctcttacaaataggatcggaggtagtatt 193  Q
    ||||||||||||| ||| |||||||| |||||||| |||||| ||||||    
T  9395434 acttttgttgacccaaaattctcttataaataggaccggagggagtatt 9395482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 117
Target Start/End: Original strand, 11795176 - 11795224
Alignment:
Q  69 ccgatcctttttataagagaatttttggtcaacaaaagttgatgtattt 117  Q
    |||||||| |||||||||||| ||| |||||||||||||  ||||||||    
T  11795176 ccgatcctatttataagagaaatttaggtcaacaaaagtgaatgtattt 11795224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 193
Target Start/End: Original strand, 13103108 - 13103156
Alignment:
Q  145 acttttgttgacctaaatttctcttacaaataggatcggaggtagtatt 193  Q
    ||||||||||||| ||| |||||||| |||||||| |||||| ||||||    
T  13103108 acttttgttgacccaaaattctcttataaataggaccggagggagtatt 13103156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 117
Target Start/End: Complemental strand, 26350472 - 26350424
Alignment:
Q  69 ccgatcctttttataagagaatttttggtcaacaaaagttgatgtattt 117  Q
    |||||||| |||||||||||| ||| |||||||||||||  ||||||||    
T  26350472 ccgatcctatttataagagaaatttaggtcaacaaaagtgaatgtattt 26350424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 117
Target Start/End: Complemental strand, 36563660 - 36563612
Alignment:
Q  69 ccgatcctttttataagagaatttttggtcaacaaaagttgatgtattt 117  Q
    |||||||| |||||||||||| ||| |||||||||||||  ||||||||    
T  36563660 ccgatcctatttataagagaaatttaggtcaacaaaagtgaatgtattt 36563612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 105; Significance: 1e-52; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 73 - 193
Target Start/End: Complemental strand, 4238712 - 4238592
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  4238712 tcctatttataagagaatttttggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttata 4238613  T
Q  173 aataggatcggaggtagtatt 193  Q
    ||||||| |||||||||||||    
T  4238612 aataggaccggaggtagtatt 4238592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 73 - 193
Target Start/End: Complemental strand, 22722049 - 22721929
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  22722049 tcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttata 22721950  T
Q  173 aataggatcggaggtagtatt 193  Q
    ||||||| |||||||||||||    
T  22721949 aataggaccggaggtagtatt 22721929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 73 - 193
Target Start/End: Complemental strand, 38964510 - 38964390
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||| |    
T  38964510 tcctatttataagagaatttttggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgatctaaatttctcttata 38964411  T
Q  173 aataggatcggaggtagtatt 193  Q
    ||||||| |||||||||||||    
T  38964410 aataggaccggaggtagtatt 38964390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 78 - 194
Target Start/End: Original strand, 44785413 - 44785529
Alignment:
Q  78 tttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttacaaatag 177  Q
    |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  44785413 tttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaatag 44785512  T
Q  178 gatcggaggtagtattt 194  Q
    || ||||||||||||||    
T  44785513 gaccggaggtagtattt 44785529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 73 - 192
Target Start/End: Original strand, 19557064 - 19557183
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  19557064 tcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttata 19557163  T
Q  173 aataggatcggaggtagtat 192  Q
    ||||||| ||||||||||||    
T  19557164 aataggaccggaggtagtat 19557183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 73 - 192
Target Start/End: Original strand, 49823393 - 49823512
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  49823393 tcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttata 49823492  T
Q  173 aataggatcggaggtagtat 192  Q
    ||||||| ||||||||||||    
T  49823493 aataggaccggaggtagtat 49823512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 73 - 191
Target Start/End: Complemental strand, 10298097 - 10297979
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  10298097 tcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttata 10297998  T
Q  173 aataggatcggaggtagta 191  Q
    ||||||| |||||||||||    
T  10297997 aataggaccggaggtagta 10297979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 73 - 194
Target Start/End: Original strand, 8817398 - 8817519
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  8817398 tcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttata 8817497  T
Q  173 aataggatcggaggtagtattt 194  Q
    ||||||| || |||||||||||    
T  8817498 aataggaccgaaggtagtattt 8817519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 73 - 193
Target Start/End: Original strand, 21295338 - 21295458
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  21295338 tcctatttataagagaattttaggtcaacaaaagttgatgtatctaattaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttata 21295437  T
Q  173 aataggatcggaggtagtatt 193  Q
    ||||||| |||||||||||||    
T  21295438 aataggaccggaggtagtatt 21295458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 73 - 193
Target Start/End: Original strand, 34080042 - 34080162
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||||||| ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  34080042 tcctatttataagagaattttgggtcaacaaaagttgatgtatcttgttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttata 34080141  T
Q  173 aataggatcggaggtagtatt 193  Q
    ||||||| |||||||||||||    
T  34080142 aataggaccggaggtagtatt 34080162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 73 - 195
Target Start/End: Original strand, 9111506 - 9111628
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||| |    
T  9111506 tcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgttgacctaaatttctcttata 9111605  T
Q  173 aataggatcggaggtagtatttg 195  Q
    ||||||| || ||||||||||||    
T  9111606 aataggaccgaaggtagtatttg 9111628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 73 - 191
Target Start/End: Complemental strand, 17653830 - 17653712
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  17653830 tcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttata 17653731  T
Q  173 aataggatcggaggtagta 191  Q
    ||||||| |||||| ||||    
T  17653730 aataggaccggagggagta 17653712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 73 - 191
Target Start/End: Complemental strand, 37509039 - 37508921
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  37509039 tcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttata 37508940  T
Q  173 aataggatcggaggtagta 191  Q
    ||||||| |||||| ||||    
T  37508939 aataggaccggagggagta 37508921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 73 - 191
Target Start/End: Complemental strand, 48340515 - 48340397
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||  |    
T  48340515 tcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttgta 48340416  T
Q  173 aataggatcggaggtagta 191  Q
    ||||||| |||||||||||    
T  48340415 aataggaccggaggtagta 48340397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 73 - 193
Target Start/End: Original strand, 2787844 - 2787964
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  2787844 tcctatttataagagaattttgggtcagcaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttata 2787943  T
Q  173 aataggatcggaggtagtatt 193  Q
    ||||||| ||||| |||||||    
T  2787944 aataggaccggagatagtatt 2787964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 73 - 193
Target Start/End: Complemental strand, 8437543 - 8437423
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| ||||||||||||||||  |||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| |    
T  8437543 tcctatttataagagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttattgacctaaatttctcttata 8437444  T
Q  173 aataggatcggaggtagtatt 193  Q
    ||||||| |||||||||||||    
T  8437443 aataggaccggaggtagtatt 8437423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 73 - 193
Target Start/End: Original strand, 40691008 - 40691128
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||| |    
T  40691008 tcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttaacctaaatttctcttata 40691107  T
Q  173 aataggatcggaggtagtatt 193  Q
    ||||||| ||||| |||||||    
T  40691108 aataggaccggagttagtatt 40691128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 73 - 193
Target Start/End: Original strand, 42507367 - 42507487
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| ||| |    
T  42507367 tcctatttataagagaattttgggtcaacaaaagttgatgtatctagttcaaaattcagtccaaatacattcacttttgttgacctaaatttctattata 42507466  T
Q  173 aataggatcggaggtagtatt 193  Q
    ||||||| |||||||||||||    
T  42507467 aataggaccggaggtagtatt 42507487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 73 - 192
Target Start/End: Complemental strand, 46208148 - 46208029
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  46208148 tcctatttataagagaattttaggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttata 46208049  T
Q  173 aataggatcggaggtagtat 192  Q
    ||||||| |||||| |||||    
T  46208048 aataggaccggagggagtat 46208029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 73 - 191
Target Start/End: Complemental strand, 51406791 - 51406673
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  51406791 tcctatttataagagaattttgggtcaacaaaaattgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttata 51406692  T
Q  173 aataggatcggaggtagta 191  Q
    |||| || |||||||||||    
T  51406691 aataagaccggaggtagta 51406673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 73 - 193
Target Start/End: Original strand, 42170358 - 42170478
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||||||| ||||||||||||||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||||||||| |    
T  42170358 tcctatttataagagaattttgggtcaacaaaagttgatgtatctggttaaaaattcactccaaatacattcacttttgttgacctaaatttctcttata 42170457  T
Q  173 aataggatcggaggtagtatt 193  Q
    |||| || |||||||||||||    
T  42170458 aataagaccggaggtagtatt 42170478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 78 - 192
Target Start/End: Original strand, 36095697 - 36095811
Alignment:
Q  78 tttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttacaaatag 177  Q
    |||| ||||||||||| | ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  36095697 tttacaagagaattttggatcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttatcttataaatag 36095796  T
Q  178 gatcggaggtagtat 192  Q
    || |||||| |||||    
T  36095797 gaccggagggagtat 36095811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 69 - 184
Target Start/End: Original strand, 33942940 - 33943055
Alignment:
Q  69 ccgatcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctct 168  Q
    |||||||| ||||||||||||  || ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| ||||| |    
T  33942940 ccgatcctatttataagagaaacttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattaacttttgttgacctaactttcttt 33943039  T
Q  169 tacaaataggatcgga 184  Q
    || |||||||||||||    
T  33943040 tataaataggatcgga 33943055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 73 - 175
Target Start/End: Original strand, 6013348 - 6013450
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||||||| |||||||||||||  || ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  6013348 tcctatttataagagaattttgggtcaacaaaagtaaatttatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttata 6013447  T
Q  173 aat 175  Q
    |||    
T  6013448 aat 6013450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 69 - 179
Target Start/End: Complemental strand, 35513595 - 35513485
Alignment:
Q  69 ccgatcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctct 168  Q
    |||||||| ||||||| |||||| | | |||| ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35513595 ccgatcctatttataaaagaattctggatcaataaaaggtgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctct 35513496  T
Q  169 tacaaatagga 179  Q
    || ||||||||    
T  35513495 tataaatagga 35513485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 73 - 194
Target Start/End: Complemental strand, 9213634 - 9213513
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| ||||| |||||| ||| ||||||||||| ||||||||||| |||| ||| | |||||| ||||||  ||||||||||||  |||| ||| ||| |    
T  9213634 tcctatttattagagaaatttaggtcaacaaaaattgatgtatttggttataaaattagtccagatacatcaacttttgttgactaaaatgtcttttata 9213535  T
Q  173 aataggatcggaggtagtattt 194  Q
    ||||||| |||||| |||||||    
T  9213534 aataggaccggagggagtattt 9213513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 106 - 180
Target Start/End: Complemental strand, 43323145 - 43323071
Alignment:
Q  106 gttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttacaaataggat 180  Q
    |||||||||||| |||||||||| | |||||||||||  ||||||||||||| || ||| ||||| |||||||||    
T  43323145 gttgatgtatttggttaaaaatttaatccaaatacatcaacttttgttgacccaattttttcttataaataggat 43323071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 194
Target Start/End: Original strand, 26019488 - 26019612
Alignment:
Q  69 ccgatcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctct 168  Q
    |||||||| ||||||||||||  |||||||||| |||||| |||||| | ||| |||||| |||| | ||||||| || |||||| ||| || |||||||    
T  26019488 ccgatcctatttataagagaaaatttggtcaaccaaagtttatgtatctggttcaaaatttagtcaagatacattaac-tttgttaacccaactttctct 26019586  T
Q  169 tacaaataggatcggaggtagtattt 194  Q
    || |||||| |  ||||| |||||||    
T  26019587 tataaatagaactggaggaagtattt 26019612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 108 - 152
Target Start/End: Original strand, 8951943 - 8951987
Alignment:
Q  108 tgatgtatttagttaaaaattcagtccaaatacattcacttttgt 152  Q
    |||||||||| ||||||||||||||||||||||||| ||||||||    
T  8951943 tgatgtattttgttaaaaattcagtccaaatacattaacttttgt 8951987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 200
Target Start/End: Original strand, 17653796 - 17653851
Alignment:
Q  145 acttttgttgacctaaatttctcttacaaataggatcggaggtagtatttgaataa 200  Q
    ||||||||||||| ||| |||||||| |||||||| |||||||||||||| |||||    
T  17653796 acttttgttgacccaaaattctcttataaataggaccggaggtagtattttaataa 17653851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 97 - 182
Target Start/End: Original strand, 29285796 - 29285879
Alignment:
Q  97 tcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttacaaataggatcg 182  Q
    |||||||||||| |||||| ||||| |||||| ||  || |||  ||||||||||||||||||||||| ||||| ||||| |||||    
T  29285796 tcaacaaaagtttatgtatgtagttcaaaatttagatcagata--ttcacttttgttgacctaaatttatcttataaataagatcg 29285879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 156
Target Start/End: Complemental strand, 5323329 - 5323241
Alignment:
Q  69 ccgatcctttttataagagaatttttggtcaacaaaagttgatgtatttagtt-aaaaattcagtccaaatacattcacttttgttgac 156  Q
    ||||| || ||||||||  || ||| ||||||||||||||||||||||| ||| ||||||||| | ||||||||||   ||||||||||    
T  5323329 ccgatactatttataagtaaaatttgggtcaacaaaagttgatgtatttggttaaaaaattcaattcaaatacattattttttgttgac 5323241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 184
Target Start/End: Complemental strand, 8092687 - 8092595
Alignment:
Q  92 tttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttacaaataggatcgga 184  Q
    ||||||||||| |||||||||||| | |||||||||| |||| | ||||||  ||||| |||||   || ||||||||| |||||||| ||||    
T  8092687 tttggtcaacagaagttgatgtatctggttaaaaatttagtcgagatacatcaactttagttgattcaattttctcttataaataggaccgga 8092595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 157
Target Start/End: Complemental strand, 30443826 - 30443762
Alignment:
Q  93 ttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacc 157  Q
    ||||||||| ||||||||||||||| ||| | |||  || ||||||||||| |||||||||||||    
T  30443826 ttggtcaactaaagttgatgtatttggttcataatatagaccaaatacattaacttttgttgacc 30443762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 145 - 192
Target Start/End: Original strand, 4238678 - 4238725
Alignment:
Q  145 acttttgttgacctaaatttctcttacaaataggatcggaggtagtat 192  Q
    ||||||||||||| ||| |||||||| |||||||| ||||||||||||    
T  4238678 acttttgttgaccaaaaattctcttataaataggaccggaggtagtat 4238725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 179
Target Start/End: Complemental strand, 33128261 - 33128218
Alignment:
Q  136 aatacattcacttttgttgacctaaatttctcttacaaatagga 179  Q
    |||||||| |||||||||||||||||||||||||| || |||||    
T  33128261 aatacattaacttttgttgacctaaatttctcttataattagga 33128218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 145 - 192
Target Start/End: Original strand, 37509005 - 37509052
Alignment:
Q  145 acttttgttgacctaaatttctcttacaaataggatcggaggtagtat 192  Q
    ||||||||||||| ||| |||||||| |||||||| ||||||||||||    
T  37509005 acttttgttgacccaaaattctcttataaataggaccggaggtagtat 37509052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 145 - 192
Target Start/End: Original strand, 46208114 - 46208161
Alignment:
Q  145 acttttgttgacctaaatttctcttacaaataggatcggaggtagtat 192  Q
    ||||||||||||||||| |||||||| |||||||| |||||| |||||    
T  46208114 acttttgttgacctaaaattctcttataaataggaccggagggagtat 46208161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 191
Target Start/End: Complemental strand, 21295372 - 21295326
Alignment:
Q  145 acttttgttgacctaaatttctcttacaaataggatcggaggtagta 191  Q
    ||||||||||||||||| |||||||| |||||||| |||||| ||||    
T  21295372 acttttgttgacctaaaattctcttataaataggaccggagggagta 21295326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 145 - 194
Target Start/End: Original strand, 10298063 - 10298112
Alignment:
Q  145 acttttgttgacctaaatttctcttacaaataggatcggaggtagtattt 194  Q
    ||||||||||||| ||| |||||||| |||||||| |||||| |||||||    
T  10298063 acttttgttgacccaaaattctcttataaataggaccggagggagtattt 10298112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 145 - 194
Target Start/End: Complemental strand, 40691042 - 40690993
Alignment:
Q  145 acttttgttgacctaaatttctcttacaaataggatcggaggtagtattt 194  Q
    ||||||||||||| ||| |||||||| |||||||| |||||| |||||||    
T  40691042 acttttgttgacccaaaattctcttataaataggaccggagggagtattt 40690993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 104; Significance: 6e-52; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 73 - 192
Target Start/End: Original strand, 43199366 - 43199485
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  43199366 tcctatttataagagaatttttggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttata 43199465  T
Q  173 aataggatcggaggtagtat 192  Q
    ||||||| ||||||||||||    
T  43199466 aataggaccggaggtagtat 43199485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 73 - 191
Target Start/End: Original strand, 12343152 - 12343270
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  12343152 tcctatttataagagaatttttggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttata 12343251  T
Q  173 aataggatcggaggtagta 191  Q
    ||||||| |||||||||||    
T  12343252 aataggaccggaggtagta 12343270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 73 - 193
Target Start/End: Original strand, 54624 - 54744
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  54624 tcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttata 54723  T
Q  173 aataggatcggaggtagtatt 193  Q
    ||||||| |||||||||||||    
T  54724 aataggaccggaggtagtatt 54744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 73 - 193
Target Start/End: Original strand, 2890174 - 2890294
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  2890174 tcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttata 2890273  T
Q  173 aataggatcggaggtagtatt 193  Q
    ||||||| |||||||||||||    
T  2890274 aataggaccggaggtagtatt 2890294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 73 - 193
Target Start/End: Original strand, 7785790 - 7785910
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  7785790 tcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttata 7785889  T
Q  173 aataggatcggaggtagtatt 193  Q
    ||||||| |||||||||||||    
T  7785890 aataggaccggaggtagtatt 7785910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 73 - 192
Target Start/End: Original strand, 25601012 - 25601131
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||||||| |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  25601012 tcctatttataagagaattttgggtcaacaaaagttaatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttata 25601111  T
Q  173 aataggatcggaggtagtat 192  Q
    ||||||||||||||||||||    
T  25601112 aataggatcggaggtagtat 25601131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 73 - 191
Target Start/End: Complemental strand, 6552773 - 6552655
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  6552773 tcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttata 6552674  T
Q  173 aataggatcggaggtagta 191  Q
    ||||||| |||||||||||    
T  6552673 aataggaccggaggtagta 6552655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 73 - 193
Target Start/End: Original strand, 7805711 - 7805831
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  7805711 tcctatttataagagaattttgggtcagcaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttata 7805810  T
Q  173 aataggatcggaggtagtatt 193  Q
    ||||||| |||||||||||||    
T  7805811 aataggaccggaggtagtatt 7805831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 73 - 191
Target Start/End: Original strand, 3304290 - 3304408
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| ||||||||| |||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  3304290 tcctatttataagaaaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttata 3304389  T
Q  173 aataggatcggaggtagta 191  Q
    ||||||| |||||||||||    
T  3304390 aataggaccggaggtagta 3304408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 73 - 191
Target Start/End: Original strand, 39571215 - 39571333
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||| |    
T  39571215 tcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgatctaaatttctcttata 39571314  T
Q  173 aataggatcggaggtagta 191  Q
    ||||||| |||||||||||    
T  39571315 aataggaccggaggtagta 39571333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 73 - 191
Target Start/End: Original strand, 44498199 - 44498317
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||||||| |||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  44498199 tcctatttataagagaattttgggtcaataaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttata 44498298  T
Q  173 aataggatcggaggtagta 191  Q
    ||||||| |||||||||||    
T  44498299 aataggaccggaggtagta 44498317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 78 - 191
Target Start/End: Original strand, 15888369 - 15888482
Alignment:
Q  78 tttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttacaaatag 177  Q
    |||||||||||||||| ||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  15888369 tttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttgttgacctaaatttctcttataaatag 15888468  T
Q  178 gatcggaggtagta 191  Q
    || |||||||||||    
T  15888469 gaccggaggtagta 15888482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 73 - 193
Target Start/End: Original strand, 33289273 - 33289393
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| |||||||||||||| |    
T  33289273 tcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttatgttgatctaaatttctcttata 33289372  T
Q  173 aataggatcggaggtagtatt 193  Q
    ||||||| |||||||||||||    
T  33289373 aataggaccggaggtagtatt 33289393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 73 - 192
Target Start/End: Original strand, 12763666 - 12763785
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| ||||||||| |||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  12763666 tcctatttataagataattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttata 12763765  T
Q  173 aataggatcggaggtagtat 192  Q
    |||| || ||||||||||||    
T  12763766 aataagaccggaggtagtat 12763785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 73 - 192
Target Start/End: Original strand, 32211375 - 32211494
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |    
T  32211375 tcctatttataagagaattttgggtcaacaaaaattgatgtatctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttata 32211474  T
Q  173 aataggatcggaggtagtat 192  Q
    ||||||| ||||||||||||    
T  32211475 aataggaccggaggtagtat 32211494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 73 - 191
Target Start/End: Complemental strand, 31654731 - 31654613
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| ||||||| |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  31654731 tcctatttataaaagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttata 31654632  T
Q  173 aataggatcggaggtagta 191  Q
    ||||||| |||||| ||||    
T  31654631 aataggaccggagggagta 31654613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 73 - 191
Target Start/End: Original strand, 32114487 - 32114605
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| ||||||||| |||||| ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  32114487 tcctatttataagaaaattttgggtcaacaaaaattgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttata 32114586  T
Q  173 aataggatcggaggtagta 191  Q
    ||||||| |||||||||||    
T  32114587 aataggaccggaggtagta 32114605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 73 - 191
Target Start/End: Complemental strand, 7012289 - 7012171
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||||||| | ||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||||| |    
T  7012289 tcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgatctaaatttctcttata 7012190  T
Q  173 aataggatcggaggtagta 191  Q
    ||||||| |||||||||||    
T  7012189 aataggaccggaggtagta 7012171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 78 - 192
Target Start/End: Complemental strand, 13578970 - 13578856
Alignment:
Q  78 tttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttacaaatag 177  Q
    |||||||||||||||| ||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||    
T  13578970 tttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttattgacctaaatttctcttataaatag 13578871  T
Q  178 gatcggaggtagtat 192  Q
     |  |||||||||||    
T  13578870 aactggaggtagtat 13578856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 190 - 252
Target Start/End: Complemental strand, 39918021 - 39917959
Alignment:
Q  190 tatttgaataagggtcaaaacaatgagagaagaaaaatttccagtcaaaacacaatgagagaa 252  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39918021 tatttgaataagggtcaaaacaatgagagaagaaaaatttccagtcaaaacacaatgagagaa 39917959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 129 - 194
Target Start/End: Original strand, 4245649 - 4245714
Alignment:
Q  129 cagtccaaatacattcacttttgttgacctaaatttctcttacaaataggatcggaggtagtattt 194  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||    
T  4245649 cagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattt 4245714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 78 - 191
Target Start/End: Complemental strand, 8587283 - 8587170
Alignment:
Q  78 tttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttacaaatag 177  Q
    ||||||||||||  ||  ||||| |||||||||||||| |||||||||||| |||| ||||||||  ||||||||||||| || ||||||||| ||||||    
T  8587283 tttataagagaaacttgagtcaataaaagttgatgtatctagttaaaaatttagtcaaaatacatcaacttttgttgaccaaactttctcttataaatag 8587184  T
Q  178 gatcggaggtagta 191  Q
    || |||||| ||||    
T  8587183 gaccggagggagta 8587170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 78 - 186
Target Start/End: Complemental strand, 17007024 - 17006916
Alignment:
Q  78 tttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttacaaatag 177  Q
    |||||||||||| |||| ||||| |||||||||||||| |  |||| ||||||||||| || |||  ||||||||||||| || ||||||||| ||||||    
T  17007024 tttataagagaaattttagtcaataaaagttgatgtatctgattaacaattcagtccagatccatcaacttttgttgacccaactttctcttataaatag 17006925  T
Q  178 gatcggagg 186  Q
    |||||||||    
T  17006924 gatcggagg 17006916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 78 - 186
Target Start/End: Original strand, 17570223 - 17570331
Alignment:
Q  78 tttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttacaaatag 177  Q
    |||||||||||| |||| ||||| |||||||||||||| |  |||| ||||||||||| || |||  ||||||||||||| || ||||||||| ||||||    
T  17570223 tttataagagaaattttagtcaataaaagttgatgtatctgattaacaattcagtccagatccatcaacttttgttgacccaactttctcttataaatag 17570322  T
Q  178 gatcggagg 186  Q
    |||||||||    
T  17570323 gatcggagg 17570331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 73 - 196
Target Start/End: Original strand, 24691991 - 24692113
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| ||| ||| |||| ||| ||||||||||||||||| ||| | ||||||| |||||| || ||||||  |||||||||||||||| ||| ||||| |    
T  24691991 tcctatttttaaaagaaatttgggtcaacaaaagttgatatatctggttaaaa-ttcagttcagatacatcaacttttgttgacctaactttttcttata 24692089  T
Q  173 aataggatcggaggtagtatttga 196  Q
    |||||||||| ||| |||||||||    
T  24692090 aataggatcgaagggagtatttga 24692113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 69 - 188
Target Start/End: Complemental strand, 28463733 - 28463614
Alignment:
Q  69 ccgatcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctct 168  Q
    |||||||| |||||   ||||| || ||||| | ||||||||| ||| | ||| ||||||||||||||||||||  ||||||||||||| || |||||||    
T  28463733 ccgatcctatttattgcagaatattgggtcaccgaaagttgatatatctggttcaaaattcagtccaaatacatcaacttttgttgacccaactttctct 28463634  T
Q  169 tacaaataggatcggaggta 188  Q
    || |||||||| ||||||||    
T  28463633 tataaataggaccggaggta 28463614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 73 - 142
Target Start/End: Complemental strand, 27422308 - 27422239
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacat 142  Q
    |||| |||||||||||| ||| ||||||||||| |  |||||| | ||||||||||||||||||||||||    
T  27422308 tcctatttataagagaaatttgggtcaacaaaaatgaatgtatctggttaaaaattcagtccaaatacat 27422239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 156
Target Start/End: Original strand, 13246802 - 13246889
Alignment:
Q  69 ccgatcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgac 156  Q
    |||||||| |||||||||||| ||| | ||||||||| |  ||||||||   ||||||||||||||| ||||||  ||||||||||||    
T  13246802 ccgatcctatttataagagaaatttggatcaacaaaaatgaatgtatttgactaaaaattcagtccagatacatgaacttttgttgac 13246889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 78 - 193
Target Start/End: Complemental strand, 33057707 - 33057592
Alignment:
Q  78 tttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttacaaatag 177  Q
    ||||||||||||  |||||||||||||| ||||||||| | ||||||| |||| |||  |||||   | ||||||||| | || ||| ||||| ||||||    
T  33057707 tttataagagaaagtttggtcaacaaaaattgatgtatctggttaaaatttcactccggatacaacaatttttgttgatccaactttgtcttataaatag 33057608  T
Q  178 gatcggaggtagtatt 193  Q
    || |||||| ||||||    
T  33057607 gaccggagggagtatt 33057592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 134 - 184
Target Start/End: Complemental strand, 13246851 - 13246801
Alignment:
Q  134 caaatacattcacttttgttgacctaaatttctcttacaaataggatcgga 184  Q
    |||||||||||| ||||||||| | |||||||||||| |||||||||||||    
T  13246851 caaatacattcatttttgttgatccaaatttctcttataaataggatcgga 13246801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 78 - 180
Target Start/End: Original strand, 24202990 - 24203092
Alignment:
Q  78 tttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttacaaatag 177  Q
    ||||||||| |  |||||||||| ||  |||||||||||| ||| |||||| |   |||||| || ||||||| ||||| ||||||||||||| ||||||    
T  24202990 tttataagaaatattttggtcaataatggttgatgtatttggttcaaaatttaaatcaaatatatccacttttattgacataaatttctcttataaatag 24203089  T
Q  178 gat 180  Q
    |||    
T  24203090 gat 24203092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 73 - 117
Target Start/End: Original strand, 8587182 - 8587226
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtattt 117  Q
    |||| ||||||||||||  ||||||||||||||||||||||||||    
T  8587182 tcctatttataagagaaagtttggtcaacaaaagttgatgtattt 8587226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 193
Target Start/End: Original strand, 27422266 - 27422322
Alignment:
Q  137 atacattcacttttgttgacctaaatttctcttacaaataggatcggaggtagtatt 193  Q
    ||||||||| ||||||||||| |||||||||||| |||||||| || ||| ||||||    
T  27422266 atacattcatttttgttgacccaaatttctcttataaataggaccgaagggagtatt 27422322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 192
Target Start/End: Complemental strand, 25601122 - 25600999
Alignment:
Q  69 ccgatcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctct 168  Q
    |||||||| |||||||||||| ||| |||||||||||||  |||||||| |    || ||    | | ||||||| ||||||||||||| ||| ||||||    
T  25601122 ccgatcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacattaacttttgttgacccaaaattctct 25601023  T
Q  169 tacaaataggatcggaggtagtat 192  Q
    || |||||||| |||||| |||||    
T  25601022 tataaataggaccggagggagtat 25600999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 195
Target Start/End: Complemental strand, 39571249 - 39571199
Alignment:
Q  145 acttttgttgacctaaatttctcttacaaataggatcggaggtagtatttg 195  Q
    ||||||||||||| ||| |||||||| |||||||| |||||| ||||||||    
T  39571249 acttttgttgacccaaaattctcttataaataggaccggagggagtatttg 39571199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 193
Target Start/End: Complemental strand, 7785824 - 7785776
Alignment:
Q  145 acttttgttgacctaaatttctcttacaaataggatcggaggtagtatt 193  Q
    ||||||||||||| ||| |||||||| |||||||| |||||| ||||||    
T  7785824 acttttgttgacccaaaattctcttataaataggaccggagggagtatt 7785776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 117
Target Start/End: Original strand, 28463623 - 28463667
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtattt 117  Q
    |||| ||||||||||||  || |||||||||||||||||||||||    
T  28463623 tcctatttataagagaaagttgggtcaacaaaagttgatgtattt 28463667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 176
Target Start/End: Original strand, 28999083 - 28999163
Alignment:
Q  96 gtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttacaaata 176  Q
    ||||| ||||||| | |||| ||||||||||||||||| | ||||||  | ||||||||||| || ||||| ||| |||||    
T  28999083 gtcaataaaagtttacgtatgtagttaaaaattcagtctagatacatcaatttttgttgaccaaactttcttttataaata 28999163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 104; Significance: 6e-52; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 73 - 192
Target Start/End: Original strand, 47838629 - 47838748
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||| |    
T  47838629 tcctatttataagagaatttttggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccgaaatttctcttata 47838728  T
Q  173 aataggatcggaggtagtat 192  Q
    ||||||||||||||||||||    
T  47838729 aataggatcggaggtagtat 47838748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 73 - 193
Target Start/End: Complemental strand, 47833729 - 47833609
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  47833729 tcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttata 47833630  T
Q  173 aataggatcggaggtagtatt 193  Q
    ||||||| |||||||||||||    
T  47833629 aataggaccggaggtagtatt 47833609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 73 - 191
Target Start/End: Complemental strand, 5986994 - 5986876
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |    
T  5986994 tcctatttataagagaattttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctatatttctcttata 5986895  T
Q  173 aataggatcggaggtagta 191  Q
    ||||| |||||||||||||    
T  5986894 aatagaatcggaggtagta 5986876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 69 - 191
Target Start/End: Complemental strand, 24704492 - 24704370
Alignment:
Q  69 ccgatcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctct 168  Q
    |||||||| |||||||||||||||| |||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24704492 ccgatcctatttataagagaattttgggtcaacaaaagttaatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctct 24704393  T
Q  169 tacaaataggatcggaggtagta 191  Q
    || |||||||| |||||||||||    
T  24704392 tataaataggaccggaggtagta 24704370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 73 - 193
Target Start/End: Complemental strand, 3372239 - 3372119
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| ||||||||| |||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  3372239 tcctatttataagataattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttata 3372140  T
Q  173 aataggatcggaggtagtatt 193  Q
    ||||||| |||||||||||||    
T  3372139 aataggaccggaggtagtatt 3372119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 73 - 193
Target Start/End: Complemental strand, 42797850 - 42797730
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  42797850 tcctatttataagagaattttaggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttata 42797751  T
Q  173 aataggatcggaggtagtatt 193  Q
     |||||| |||||||||||||    
T  42797750 tataggaccggaggtagtatt 42797730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 73 - 193
Target Start/End: Complemental strand, 48336381 - 48336261
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| ||||||||| |||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  48336381 tcctatttataagaaaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttata 48336282  T
Q  173 aataggatcggaggtagtatt 193  Q
    ||||||| |||||||||||||    
T  48336281 aataggaccggaggtagtatt 48336261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 73 - 192
Target Start/End: Original strand, 3904695 - 3904814
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |    
T  3904695 tcctatttataagagaattttgggtcaacaaaaattgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttcttttata 3904794  T
Q  173 aataggatcggaggtagtat 192  Q
    ||||||| ||||||||||||    
T  3904795 aataggaccggaggtagtat 3904814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 78 - 193
Target Start/End: Complemental strand, 3993089 - 3992974
Alignment:
Q  78 tttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttacaaatag 177  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||    
T  3993089 tttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccgaaatttctcttataaatag 3992990  T
Q  178 gatcggaggtagtatt 193  Q
    || |||||||||||||    
T  3992989 gaccggaggtagtatt 3992974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 73 - 191
Target Start/End: Original strand, 6121905 - 6122023
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||| |    
T  6121905 tcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgatctaaatttctcttata 6122004  T
Q  173 aataggatcggaggtagta 191  Q
    ||||||| |||||||||||    
T  6122005 aataggaccggaggtagta 6122023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 73 - 191
Target Start/End: Original strand, 20538698 - 20538816
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  20538698 tcctatttataagagaattttgggtcaacaaaatttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttata 20538797  T
Q  173 aataggatcggaggtagta 191  Q
    ||||||| |||||||||||    
T  20538798 aataggaccggaggtagta 20538816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 73 - 191
Target Start/End: Complemental strand, 53337488 - 53337370
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||||||| |||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  53337488 tcctatttataagagaattttgggtcaataaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttata 53337389  T
Q  173 aataggatcggaggtagta 191  Q
    ||||||| |||||||||||    
T  53337388 aataggaccggaggtagta 53337370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 78 - 192
Target Start/End: Complemental strand, 7579423 - 7579309
Alignment:
Q  78 tttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttacaaatag 177  Q
    |||||||||||||||| ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||||||||||| ||||||    
T  7579423 tttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttgttaacctaaatttctcttataaatag 7579324  T
Q  178 gatcggaggtagtat 192  Q
    || ||||||||||||    
T  7579323 gaccggaggtagtat 7579309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 73 - 191
Target Start/End: Complemental strand, 46797843 - 46797725
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||||||| ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  46797843 tcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttata 46797744  T
Q  173 aataggatcggaggtagta 191  Q
    ||||| | |||||||||||    
T  46797743 aatagaaccggaggtagta 46797725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 73 - 194
Target Start/End: Original strand, 41469778 - 41469899
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| ||| |    
T  41469778 tcctatttataagagaatttttggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttcttttata 41469877  T
Q  173 aataggatcggaggtagtattt 194  Q
    ||||||| || ||| |||||||    
T  41469878 aataggaccgaaggaagtattt 41469899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 73 - 194
Target Start/End: Complemental strand, 43900667 - 43900546
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||| |    
T  43900667 tcctatttataagagaattttgggttaacaaaagttgatgtatctagttaaaaattcagtccaaatacatttacttttgttgacctaaatttctcttata 43900568  T
Q  173 aataggatcggaggtagtattt 194  Q
    ||||||| |||||| |||||||    
T  43900567 aataggaccggagggagtattt 43900546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 73 - 193
Target Start/End: Original strand, 51894594 - 51894714
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||||||| ||||||||||||||||||||| | ||||||||||||||||||| |||||||||||||||||||||||||| ||||| |    
T  51894594 tcctatttataagagaattttgggtcaacaaaagttgatgtatctggttaaaaattcagtccaaaaacattcacttttgttgacctaaatttttcttata 51894693  T
Q  173 aataggatcggaggtagtatt 193  Q
    ||||||| |||||||||||||    
T  51894694 aataggaccggaggtagtatt 51894714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 73 - 191
Target Start/End: Complemental strand, 52756793 - 52756675
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| ||||||| |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| |    
T  52756793 tcctatttataaaagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttatgttgacctaaatttctcttata 52756694  T
Q  173 aataggatcggaggtagta 191  Q
    ||||||| ||||| |||||    
T  52756693 aataggaccggagatagta 52756675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 80 - 192
Target Start/End: Complemental strand, 33551312 - 33551200
Alignment:
Q  80 tataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttacaaatagga 179  Q
    |||||||||||||| |||  |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||    
T  33551312 tataagagaattttgggtttacaaaagttgatgtatctagttaaaaattcagtcaaaatacattcacttttgttgacctaaatttctcttataaatagga 33551213  T
Q  180 tcggaggtagtat 192  Q
     ||||||||||||    
T  33551212 ccggaggtagtat 33551200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 73 - 177
Target Start/End: Complemental strand, 33621914 - 33621810
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| ||||||||| |||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  33621914 tcctatttataagataattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttata 33621815  T
Q  173 aatag 177  Q
    |||||    
T  33621814 aatag 33621810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 80 - 192
Target Start/End: Complemental strand, 26231688 - 26231576
Alignment:
Q  80 tataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttacaaatagga 179  Q
    |||||||||||||| |||  |||||||||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  26231688 tataagagaattttcggtttacaaaagttgatatatctagttaaaaattcagtccaaatacattcgcttttgttgacctaaatttctcttataaatagga 26231589  T
Q  180 tcggaggtagtat 192  Q
     ||||||||||||    
T  26231588 ccggaggtagtat 26231576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 73 - 179
Target Start/End: Complemental strand, 3422178 - 3422073
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||||| |||||||||||| |||||||||||||||||||||||| |    
T  3422178 tcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattca-ttttgttgacctaaatttctcttata 3422080  T
Q  173 aatagga 179  Q
    |||||||    
T  3422079 aatagga 3422073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 73 - 192
Target Start/End: Original strand, 40913201 - 40913320
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||| ||| | ||||||||||||||| |||  |||||||||||||||||||||||||||||||||||||| |||||||||||||| |    
T  40913201 tcctatttataagagaaatttggatcaacaaaagttgatatatccagttaaaaattcagtccaaatacattcacttttgttgatctaaatttctcttata 40913300  T
Q  173 aataggatcggaggtagtat 192  Q
    ||||||| |||||| |||||    
T  40913301 aataggaccggagggagtat 40913320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 73 - 181
Target Start/End: Original strand, 41615688 - 41615796
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| ||||||||||||  || | |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| ||||||||| |    
T  41615688 tcctatttataagagaaaattggatcaacaaaagttgatgtatttagttaaaaattaagtccaaatacattaacttttgttgacctaattttctcttata 41615787  T
Q  173 aataggatc 181  Q
    |||||||||    
T  41615788 aataggatc 41615796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 95 - 192
Target Start/End: Complemental strand, 25855179 - 25855082
Alignment:
Q  95 ggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttacaaataggatcggaggtagtat 192  Q
    |||| |||||||| ||||||||| ||||||||||||||||||||||||| ||||||||||||  || ||||||| | |||||||| | |||| |||||    
T  25855179 ggtctacaaaagtcgatgtatttggttaaaaattcagtccaaatacattaacttttgttgactcaactttctctcataaataggacctgagggagtat 25855082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 97 - 179
Target Start/End: Complemental strand, 29845739 - 29845657
Alignment:
Q  97 tcaacaaaagtt-gatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttacaaatagga 179  Q
    |||||||||||| |||||||| ||||||||||||||| |||||| ||| | |||||||||||||||||||||||| || |||||    
T  29845739 tcaacaaaagtttgatgtatt-agttaaaaattcagttcaaatatattaatttttgttgacctaaatttctcttataagtagga 29845657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 78 - 176
Target Start/End: Original strand, 50430435 - 50430533
Alignment:
Q  78 tttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttacaaata 176  Q
    ||||||||| |  ||| ||||||||||| ||||||||| | |||||||||||| |||||||||||  ||||||||||||| || || |||||| |||||    
T  50430435 tttataagatatatttgggtcaacaaaaattgatgtatctggttaaaaattcaatccaaatacatcaacttttgttgacccaacttgctcttataaata 50430533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 78 - 177
Target Start/End: Complemental strand, 17344326 - 17344227
Alignment:
Q  78 tttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttacaaatag 177  Q
    |||||||||||| ||| | |||||||||||||||||||    ||||||||||||| || ||||||  |||||||||||  ||| ||||||||| ||||||    
T  17344326 tttataagagaaatttggatcaacaaaagttgatgtatccgattaaaaattcagttcagatacatcaacttttgttgatttaactttctcttataaatag 17344227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 192
Target Start/End: Original strand, 24704446 - 24704501
Alignment:
Q  137 atacattcacttttgttgacctaaatttctcttacaaataggatcggaggtagtat 192  Q
    ||||||| ||||||||||||| ||| |||||||| ||||||||||||||| |||||    
T  24704446 atacattaacttttgttgacccaaaattctcttataaataggatcggagggagtat 24704501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 137 - 191
Target Start/End: Original strand, 4780371 - 4780425
Alignment:
Q  137 atacattcacttttgttgacctaaatttctcttacaaataggatcggaggtagta 191  Q
    ||||||| ||||||||||||| |||||||||||| |||||||| |||||| ||||    
T  4780371 atacattaacttttgttgaccaaaatttctcttataaataggaccggagggagta 4780425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 113 - 185
Target Start/End: Original strand, 17236839 - 17236912
Alignment:
Q  113 tatttagttaaaaattcagtccaaa-tacattcacttttgttgacctaaatttctcttacaaataggatcggag 185  Q
    ||||| ||||||||||||||| ||| |||||  ||||||||||||| |||||| ||||| |||||||| |||||    
T  17236839 tatttggttaaaaattcagtctaaaatacatcaacttttgttgacccaaatttttcttataaataggaccggag 17236912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 95 - 176
Target Start/End: Complemental strand, 31013117 - 31013036
Alignment:
Q  95 ggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttacaaata 176  Q
    |||||||||||| |||||||| ||||||| |||| |  ||||||||||  ||||||||||| |||||| ||| ||| |||||    
T  31013117 ggtcaacaaaagatgatgtatctagttaagaatttaaaccaaatacatctacttttgttgatctaaatgtcttttataaata 31013036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 73 - 142
Target Start/End: Complemental strand, 45725974 - 45725905
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacat 142  Q
    |||| ||||||||||||  ||| ||||||||||||| | |||||||||||| |||| |||| ||||||||    
T  45725974 tcctatttataagagaaagtttcgtcaacaaaagttaacgtatttagttaagaatttagtctaaatacat 45725905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 73 - 128
Target Start/End: Complemental strand, 4780413 - 4780358
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaatt 128  Q
    |||| |||||||||||| |||||||||||||||||| |||||| |  |||||||||    
T  4780413 tcctatttataagagaaattttggtcaacaaaagttaatgtatctgattaaaaatt 4780358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 132
Target Start/End: Complemental strand, 45478214 - 45478151
Alignment:
Q  69 ccgatcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagt 132  Q
    |||||||| |||||||||||| | | |||||| ||||||||||||||   ||||||||||||||    
T  45478214 ccgatcctatttataagagaaatgtgggtcaataaaagttgatgtatccggttaaaaattcagt 45478151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 191
Target Start/End: Original strand, 42797816 - 42797862
Alignment:
Q  145 acttttgttgacctaaatttctcttacaaataggatcggaggtagta 191  Q
    ||||||||||||||||| |||||||| |||||||| |||||| ||||    
T  42797816 acttttgttgacctaaaattctcttataaataggaccggagggagta 42797862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 193
Target Start/End: Original strand, 3422144 - 3422192
Alignment:
Q  145 acttttgttgacctaaatttctcttacaaataggatcggaggtagtatt 193  Q
    ||||||||||||| ||| |||||||| |||||||| |||||| ||||||    
T  3422144 acttttgttgacccaaaattctcttataaataggaccggagggagtatt 3422192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 128
Target Start/End: Complemental strand, 6422590 - 6422530
Alignment:
Q  69 ccgatcctt-tttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaatt 128  Q
    ||||||||| |||||||||||  ||| ||||||||||| ||||| ||||||||| ||||||    
T  6422590 ccgatccttatttataagagatatttaggtcaacaaaaattgatatatttagtttaaaatt 6422530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 117
Target Start/End: Complemental strand, 17236906 - 17236862
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtattt 117  Q
    |||| ||||||||| || ||| |||||||||||||||||||||||    
T  17236906 tcctatttataagaaaaatttgggtcaacaaaagttgatgtattt 17236862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 193
Target Start/End: Complemental strand, 41469812 - 41469764
Alignment:
Q  145 acttttgttgacctaaatttctcttacaaataggatcggaggtagtatt 193  Q
    ||||||||||||| ||| |||||||| |||||||| |||||| ||||||    
T  41469812 acttttgttgaccaaaaattctcttataaataggaccggagggagtatt 41469764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 193
Target Start/End: Complemental strand, 47838663 - 47838615
Alignment:
Q  145 acttttgttgacctaaatttctcttacaaataggatcggaggtagtatt 193  Q
    ||||||||||||| ||| |||||||| |||||||| |||||| ||||||    
T  47838663 acttttgttgaccaaaaattctcttataaataggaccggagggagtatt 47838615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 117
Target Start/End: Complemental strand, 47838739 - 47838691
Alignment:
Q  69 ccgatcctttttataagagaatttttggtcaacaaaagttgatgtattt 117  Q
    |||||||| |||||||||||| ||| |||||||||||||  ||||||||    
T  47838739 ccgatcctatttataagagaaatttcggtcaacaaaagtgaatgtattt 47838691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 103; Significance: 2e-51; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 73 - 195
Target Start/End: Complemental strand, 46840978 - 46840856
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  46840978 tcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttata 46840879  T
Q  173 aataggatcggaggtagtatttg 195  Q
    ||||||| |||||||||||||||    
T  46840878 aataggaccggaggtagtatttg 46840856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 78 - 194
Target Start/End: Original strand, 1565746 - 1565862
Alignment:
Q  78 tttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttacaaatag 177  Q
    |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  1565746 tttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaatag 1565845  T
Q  178 gatcggaggtagtattt 194  Q
    || ||||||||||||||    
T  1565846 gaccggaggtagtattt 1565862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 73 - 193
Target Start/End: Original strand, 1738459 - 1738579
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  1738459 tcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttata 1738558  T
Q  173 aataggatcggaggtagtatt 193  Q
    ||||||| |||||||||||||    
T  1738559 aataggaccggaggtagtatt 1738579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 73 - 193
Target Start/End: Complemental strand, 7240867 - 7240747
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  7240867 tcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttata 7240768  T
Q  173 aataggatcggaggtagtatt 193  Q
    ||||||| |||||||||||||    
T  7240767 aataggaccggaggtagtatt 7240747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 73 - 192
Target Start/End: Original strand, 38063925 - 38064044
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  38063925 tcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttata 38064024  T
Q  173 aataggatcggaggtagtat 192  Q
    ||||||| ||||||||||||    
T  38064025 aataggaccggaggtagtat 38064044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 69 - 191
Target Start/End: Complemental strand, 36583517 - 36583395
Alignment:
Q  69 ccgatcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctct 168  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  36583517 ccgatcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattaagtccaaatacattcacttttgttgacctaaatttctct 36583418  T
Q  169 tacaaataggatcggaggtagta 191  Q
    || |||||||| |||||||||||    
T  36583417 tataaataggaccggaggtagta 36583395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 78 - 191
Target Start/End: Original strand, 31319416 - 31319529
Alignment:
Q  78 tttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttacaaatag 177  Q
    |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  31319416 tttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaatag 31319515  T
Q  178 gatcggaggtagta 191  Q
    || |||||||||||    
T  31319516 gaccggaggtagta 31319529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 73 - 193
Target Start/End: Complemental strand, 9268874 - 9268754
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  9268874 tcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttata 9268775  T
Q  173 aataggatcggaggtagtatt 193  Q
    ||||||| | |||||||||||    
T  9268774 aataggaccagaggtagtatt 9268754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 73 - 192
Target Start/End: Complemental strand, 7482343 - 7482224
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||| |    
T  7482343 tcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgttgacctaaatttctcttata 7482244  T
Q  173 aataggatcggaggtagtat 192  Q
    ||||||| ||||||||||||    
T  7482243 aataggaccggaggtagtat 7482224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 69 - 191
Target Start/End: Original strand, 94326 - 94448
Alignment:
Q  69 ccgatcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctct 168  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  94326 ccgatcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattctgtccaaatacattcacttttgttgacctaaatttctct 94425  T
Q  169 tacaaataggatcggaggtagta 191  Q
    || |||||||| ||||| |||||    
T  94426 tataaataggaccggagatagta 94448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 73 - 191
Target Start/End: Original strand, 23314151 - 23314269
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||||||| ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  23314151 tcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttata 23314250  T
Q  173 aataggatcggaggtagta 191  Q
    ||||||| |||||||||||    
T  23314251 aataggaccggaggtagta 23314269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 73 - 193
Target Start/End: Complemental strand, 22285817 - 22285697
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  22285817 tcctatttataagagaattttgggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttata 22285718  T
Q  173 aataggatcggaggtagtatt 193  Q
    ||||||| |||||| ||||||    
T  22285717 aataggaccggagggagtatt 22285697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 73 - 191
Target Start/End: Original strand, 36016208 - 36016326
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  36016208 tcctatttataagagaattttgggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttata 36016307  T
Q  173 aataggatcggaggtagta 191  Q
    ||||||| |||||| ||||    
T  36016308 aataggaccggagggagta 36016326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 73 - 191
Target Start/End: Complemental strand, 38441578 - 38441460
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| ||||||||||||| |    
T  38441578 tcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgttgacataaatttctcttata 38441479  T
Q  173 aataggatcggaggtagta 191  Q
    ||||||| |||||||||||    
T  38441478 aataggaccggaggtagta 38441460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 73 - 192
Target Start/End: Original strand, 28536763 - 28536882
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||||||| | |||| |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |    
T  28536763 tcctatttataagagaattttggatcaataaaagttgatgtatctagttaaaaattcattccaaatacattcacttttgttgacctaaatttctcttata 28536862  T
Q  173 aataggatcggaggtagtat 192  Q
    ||||||| ||||||||||||    
T  28536863 aataggaccggaggtagtat 28536882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 73 - 192
Target Start/End: Complemental strand, 4790366 - 4790247
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||||||| |||||| |||||||||||||| |||||||||||| |||||||||||||||| |||||||||||||||||| ||||| |    
T  4790366 tcctatttataagagaattttgggtcaataaaagttgatgtatctagttaaaaatttagtccaaatacattcatttttgttgacctaaatttttcttata 4790267  T
Q  173 aataggatcggaggtagtat 192  Q
    ||||||| ||||||||||||    
T  4790266 aataggaccggaggtagtat 4790247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 73 - 175
Target Start/End: Complemental strand, 33418494 - 33418392
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  33418494 tcctatttataagagaattttgggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaaa 33418395  T
Q  173 aat 175  Q
    |||    
T  33418394 aat 33418392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 73 - 194
Target Start/End: Complemental strand, 9575527 - 9575406
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| ||||||||||||  |||||||||||||| ||||||||| ||||||||||||||||| |||||| || ||||||||||||| || |||||||||||    
T  9575527 tcctatttataagagaaagtttggtcaacaaaacttgatgtatctagttaaaaattcagtctaaatacgttaacttttgttgacccaactttctcttaca 9575428  T
Q  173 aataggatcggaggtagtattt 194  Q
    ||||||| | |||| |||||||    
T  9575427 aataggaccagagggagtattt 9575406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 73 - 185
Target Start/End: Original strand, 40840131 - 40840243
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||| |||| ||||||||||||||||||| |||||||||||||||||||||||||||| | ||||||| || ||| ||||||||  |    
T  40840131 tcctatttataagagaaatttttgtcaacaaaagttgatgtacttagttaaaaattcagtccaaatacattgatttttgttaacttaactttctcttcta 40840230  T
Q  173 aataggatcggag 185  Q
    ||||||| |||||    
T  40840231 aataggaccggag 40840243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 73 - 191
Target Start/End: Original strand, 7269417 - 7269535
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| ||||||||||||  || ||| |||||||||||||| || | ||||||||||||||  | ||||||  | ||||||||||| || ||| ||||| |    
T  7269417 tcctatttataagagaaagttgggttaacaaaagttgatgcatctggttaaaaattcagtttagatacatcaatttttgttgacccaactttttcttata 7269516  T
Q  173 aataggatcggaggtagta 191  Q
    |||| || |||||| ||||    
T  7269517 aataagaccggagggagta 7269535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 193
Target Start/End: Original strand, 36583479 - 36583527
Alignment:
Q  145 acttttgttgacctaaatttctcttacaaataggatcggaggtagtatt 193  Q
    ||||||||||||| ||| |||||||| ||||||||||||||| ||||||    
T  36583479 acttttgttgacccaaaattctcttataaataggatcggagggagtatt 36583527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 191
Target Start/End: Complemental strand, 94364 - 94318
Alignment:
Q  145 acttttgttgacctaaatttctcttacaaataggatcggaggtagta 191  Q
    ||||||||||||| ||| |||||||| ||||||||||||||| ||||    
T  94364 acttttgttgacccaaaattctcttataaataggatcggagggagta 94318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 193
Target Start/End: Complemental strand, 1738493 - 1738445
Alignment:
Q  145 acttttgttgacctaaatttctcttacaaataggatcggaggtagtatt 193  Q
    ||||||||||||| ||| |||||||| |||||||| |||||| ||||||    
T  1738493 acttttgttgacccaaaattctcttataaataggaccggagggagtatt 1738445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 128
Target Start/End: Original strand, 6803328 - 6803364
Alignment:
Q  92 tttggtcaacaaaagttgatgtatttagttaaaaatt 128  Q
    ||||||||||||||||| |||||||||||| ||||||    
T  6803328 tttggtcaacaaaagttaatgtatttagtttaaaatt 6803364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 193
Target Start/End: Original strand, 7240833 - 7240881
Alignment:
Q  145 acttttgttgacctaaatttctcttacaaataggatcggaggtagtatt 193  Q
    ||||||||||||| ||| |||||||| |||||||| |||||| ||||||    
T  7240833 acttttgttgacccaaaattctcttataaataggaccggagggagtatt 7240881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 193
Target Start/End: Original strand, 7482309 - 7482357
Alignment:
Q  145 acttttgttgacctaaatttctcttacaaataggatcggaggtagtatt 193  Q
    ||||||||||||| ||| |||||||| |||||||| |||||| ||||||    
T  7482309 acttttgttgacccaaaattctcttataaataggaccggagggagtatt 7482357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 102; Significance: 9e-51; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 73 - 194
Target Start/End: Original strand, 41478651 - 41478772
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  41478651 tcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttata 41478750  T
Q  173 aataggatcggaggtagtattt 194  Q
    ||||||| ||||||||||||||    
T  41478751 aataggaccggaggtagtattt 41478772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 67 - 192
Target Start/End: Complemental strand, 44397671 - 44397546
Alignment:
Q  67 ccccgatcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 166  Q
    ||||| |||| |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44397671 ccccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 44397572  T
Q  167 cttacaaataggatcggaggtagtat 192  Q
    |||| |||||||| ||||||||||||    
T  44397571 cttataaataggaccggaggtagtat 44397546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 73 - 193
Target Start/End: Original strand, 37990025 - 37990145
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  37990025 tcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttata 37990124  T
Q  173 aataggatcggaggtagtatt 193  Q
    ||||||| |||||||||||||    
T  37990125 aataggaccggaggtagtatt 37990145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 73 - 192
Target Start/End: Complemental strand, 3055676 - 3055557
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  3055676 tcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttata 3055577  T
Q  173 aataggatcggaggtagtat 192  Q
    ||||||| ||||||||||||    
T  3055576 aataggaccggaggtagtat 3055557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 73 - 192
Target Start/End: Complemental strand, 15896960 - 15896841
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  15896960 tcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttata 15896861  T
Q  173 aataggatcggaggtagtat 192  Q
    ||||||| ||||||||||||    
T  15896860 aataggaccggaggtagtat 15896841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 73 - 192
Target Start/End: Complemental strand, 44398804 - 44398685
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  44398804 tcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttata 44398705  T
Q  173 aataggatcggaggtagtat 192  Q
    ||||||| ||||||||||||    
T  44398704 aataggaccggaggtagtat 44398685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 73 - 191
Target Start/End: Original strand, 13197722 - 13197840
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  13197722 tcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttata 13197821  T
Q  173 aataggatcggaggtagta 191  Q
    ||||||| |||||||||||    
T  13197822 aataggaccggaggtagta 13197840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 73 - 192
Target Start/End: Original strand, 16243795 - 16243914
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||| |    
T  16243795 tcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttttcttata 16243894  T
Q  173 aataggatcggaggtagtat 192  Q
    ||||||| ||||| ||||||    
T  16243895 aataggaccggagatagtat 16243914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 73 - 192
Target Start/End: Original strand, 38917534 - 38917653
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||| ||||| |    
T  38917534 tcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttattgacctaaatttatcttata 38917633  T
Q  173 aataggatcggaggtagtat 192  Q
    ||||||| ||||||||||||    
T  38917634 aataggaccggaggtagtat 38917653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 73 - 191
Target Start/End: Original strand, 6648531 - 6648649
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||||||| |    
T  6648531 tcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttatgttgacctaaatttctcttata 6648630  T
Q  173 aataggatcggaggtagta 191  Q
    ||||||| |||||||||||    
T  6648631 aataggaccggaggtagta 6648649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 73 - 191
Target Start/End: Original strand, 16044329 - 16044447
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||||||| ||||||| ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||| |    
T  16044329 tcctatttataagagaattttgggtcaactaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgttgacctaaatttctcttata 16044428  T
Q  173 aataggatcggaggtagta 191  Q
    ||||||| |||||||||||    
T  16044429 aataggaccggaggtagta 16044447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 73 - 191
Target Start/End: Original strand, 37666622 - 37666740
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||||||| ||||||| ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||| |    
T  37666622 tcctatttataagagaattttgggtcaactaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgttgacctaaatttctcttata 37666721  T
Q  173 aataggatcggaggtagta 191  Q
    ||||||| |||||||||||    
T  37666722 aataggaccggaggtagta 37666740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 73 - 194
Target Start/End: Complemental strand, 13344602 - 13344481
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||||||| | ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |    
T  13344602 tcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttata 13344503  T
Q  173 aataggatcggaggtagtattt 194  Q
    ||||| | ||||||||||||||    
T  13344502 aatagaaccggaggtagtattt 13344481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 80 - 192
Target Start/End: Original strand, 4683951 - 4684063
Alignment:
Q  80 tataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttacaaatagga 179  Q
    |||||||||||||| |||  |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  4683951 tataagagaattttcggtttacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaatagga 4684050  T
Q  180 tcggaggtagtat 192  Q
     ||||||||||||    
T  4684051 ccggaggtagtat 4684063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 73 - 193
Target Start/End: Complemental strand, 15372344 - 15372224
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||||||| ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  15372344 tcctatttataagagaattttgggtcaacaaaagttgatgtatctcgttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttata 15372245  T
Q  173 aataggatcggaggtagtatt 193  Q
    |||||||  ||||| ||||||    
T  15372244 aataggactggagggagtatt 15372224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 73 - 192
Target Start/End: Original strand, 9047767 - 9047886
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| |    
T  9047767 tcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactttttttgacctaaatttctcttata 9047866  T
Q  173 aataggatcggaggtagtat 192  Q
    |||| || ||||| ||||||    
T  9047867 aatatgaccggagatagtat 9047886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 73 - 191
Target Start/End: Original strand, 12337949 - 12338067
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| ||||| |    
T  12337949 tcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttttcttata 12338048  T
Q  173 aataggatcggaggtagta 191  Q
    ||||| | |||||||||||    
T  12338049 aatagaaccggaggtagta 12338067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 73 - 189
Target Start/End: Original strand, 30099194 - 30099310
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| ||||| |||||||||| ||||||||||||||||||||| || ||||||||||| |||||||||||||| |||||||||||||||||||||||| |    
T  30099194 tcctatttattagagaattttgggtcaacaaaagttgatgtatctaattaaaaattcaatccaaatacattcatttttgttgacctaaatttctcttata 30099293  T
Q  173 aataggatcggaggtag 189  Q
    |||||||||||||||||    
T  30099294 aataggatcggaggtag 30099310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 69 - 191
Target Start/End: Original strand, 12170407 - 12170529
Alignment:
Q  69 ccgatcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctct 168  Q
    |||||| | ||||||||||||  || ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| |||||||    
T  12170407 ccgatcttatttataagagaaacttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattaacttttattgacctaattttctct 12170506  T
Q  169 tacaaataggatcggaggtagta 191  Q
    |  ||||||||||||||| ||||    
T  12170507 tgtaaataggatcggagggagta 12170529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 73 - 179
Target Start/End: Original strand, 41492908 - 41493014
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||| ||| ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| ||| |    
T  41492908 tcctatttataagagaaatttgggtcaacaaaagttgatgtatctagttaaaaattctgtccaaatacattcacttttgttgacctaaatttcttttata 41493007  T
Q  173 aatagga 179  Q
    |||||||    
T  41493008 aatagga 41493014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 73 - 163
Target Start/End: Original strand, 44804590 - 44804680
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatt 163  Q
    |||| ||||||||||||||||  || ||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||    
T  44804590 tcctatttataagagaattttaagttaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttatgttgacctaaatt 44804680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 73 - 170
Target Start/End: Complemental strand, 16734901 - 16734804
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctctta 170  Q
    |||| ||||||||||||  ||  || ||||||||||||||||||| ||||||||||||||||| ||||||  ||||||||||||| || |||||||||    
T  16734901 tcctatttataagagaaagttgagtaaacaaaagttgatgtatttggttaaaaattcagtccagatacatcaacttttgttgaccaaactttctctta 16734804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 101 - 160
Target Start/End: Complemental strand, 41453149 - 41453090
Alignment:
Q  101 caaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaa 160  Q
    ||||||||||||||||| ||||||||||||||||||||||||| |||||| |||||||||    
T  41453149 caaaagttgatgtattttgttaaaaattcagtccaaatacattaacttttattgacctaa 41453090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 111 - 185
Target Start/End: Complemental strand, 31150733 - 31150659
Alignment:
Q  111 tgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttacaaataggatcggag 185  Q
    ||||| |||||||||||| |||||||||||||  ||||||||||||  || ||||||||| ||||||||||||||    
T  31150733 tgtatctagttaaaaatttagtccaaatacataaacttttgttgacgcaactttctcttataaataggatcggag 31150659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 145 - 199
Target Start/End: Original strand, 3055642 - 3055696
Alignment:
Q  145 acttttgttgacctaaatttctcttacaaataggatcggaggtagtatttgaata 199  Q
    ||||||||||||| ||| |||||||| |||||||| |||||| ||||||||||||    
T  3055642 acttttgttgacccaaaattctcttataaataggaccggagggagtatttgaata 3055696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 179
Target Start/End: Original strand, 13724136 - 13724220
Alignment:
Q  95 ggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttacaaatagga 179  Q
    ||||||||||||||||||||||| |||||||| |  | ||| ||||||  |||||||||||||  ||| || |||| ||||||||    
T  13724136 ggtcaacaaaagttgatgtatttggttaaaaaattggaccagatacatcaacttttgttgaccagaatatcgcttataaatagga 13724220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 73 - 117
Target Start/End: Complemental strand, 23227390 - 23227346
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtattt 117  Q
    |||| |||||||||||  |||||||||||||||||||||||||||    
T  23227390 tcctatttataagagacattttggtcaacaaaagttgatgtattt 23227346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 193
Target Start/End: Complemental strand, 41492942 - 41492894
Alignment:
Q  145 acttttgttgacctaaatttctcttacaaataggatcggaggtagtatt 193  Q
    ||||||||||||| |||||||||||| |||||||| |||||| ||||||    
T  41492942 acttttgttgacccaaatttctcttataaataggaccggagggagtatt 41492894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 63 - 193
Target Start/End: Complemental strand, 14740596 - 14740465
Alignment:
Q  63 tactccccg-atcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaa 161  Q
    ||||||||| ||||||||||||||| |  |||  |||||| |||  |||||||| | ||||||||||  | | |||||||||  |||||||||||  |||    
T  14740596 tactccccggatcctttttataagaaacatttaagtcaactaaatgtgatgtatctggttaaaaatttggacgaaatacattaccttttgttgacacaaa 14740497  T
Q  162 tttctcttacaaataggatcggaggtagtatt 193  Q
    | ||||||| | ||||||||| ||| ||||||    
T  14740496 tatctcttatatataggatcgaagggagtatt 14740465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 145 - 194
Target Start/End: Complemental strand, 37990059 - 37990010
Alignment:
Q  145 acttttgttgacctaaatttctcttacaaataggatcggaggtagtattt 194  Q
    ||||||||||||| ||| |||||||| |||||||| |||||| |||||||    
T  37990059 acttttgttgacccaaaattctcttataaataggaccggagggagtattt 37990010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 82 - 155
Target Start/End: Complemental strand, 45294432 - 45294360
Alignment:
Q  82 taagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttga 155  Q
    ||||| || ||| |||||||||||||| | |||||| |||||||| | ||||| |||||||| |||||||||||    
T  45294432 taagaaaaatttaggtcaacaaaagttaaagtatttggttaaaaaattagtcc-aatacattaacttttgttga 45294360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 176
Target Start/End: Original strand, 4553069 - 4553125
Alignment:
Q  120 ttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttacaaata 176  Q
    ||||||||||| |||||||||||  | ||||||||||| || ||||||||| |||||    
T  4553069 ttaaaaattcaatccaaatacatctatttttgttgaccaaactttctcttataaata 4553125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 193
Target Start/End: Complemental strand, 6648565 - 6648517
Alignment:
Q  145 acttttgttgacctaaatttctcttacaaataggatcggaggtagtatt 193  Q
    ||||||||||||| ||| |||||||| |||||||| |||||| ||||||    
T  6648565 acttttgttgacccaaaattctcttataaataggaccggagggagtatt 6648517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 193
Target Start/End: Complemental strand, 9047801 - 9047753
Alignment:
Q  145 acttttgttgacctaaatttctcttacaaataggatcggaggtagtatt 193  Q
    ||||||||||||| ||| |||||||| |||||||| |||||| ||||||    
T  9047801 acttttgttgacccaaaattctcttataaataggaccggagggagtatt 9047753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 186
Target Start/End: Original strand, 16561042 - 16561126
Alignment:
Q  102 aaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttacaaataggatcggagg 186  Q
    |||||||||||||||| ||| |||||| || ||||||| ||  |  |||||||| | || ||||||||| ||||| |||||||||    
T  16561042 aaaagttgatgtattttgtttaaaatttagaccaaataaatcaatctttgttgatcaaactttctcttataaatatgatcggagg 16561126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 157
Target Start/End: Original strand, 31469093 - 31469157
Alignment:
Q  93 ttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacc 157  Q
    |||||||||||||||| |||||||| ||||||||||     |||||||||| ||||| |||||||    
T  31469093 ttggtcaacaaaagttaatgtatttggttaaaaatttgtatcaaatacattaactttcgttgacc 31469157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 117
Target Start/End: Complemental strand, 40714060 - 40714016
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtattt 117  Q
    ||||| |||||||||| || | |||||||||||||||||||||||    
T  40714060 tccttcttataagagacttgtaggtcaacaaaagttgatgtattt 40714016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 193
Target Start/End: Complemental strand, 41478685 - 41478637
Alignment:
Q  145 acttttgttgacctaaatttctcttacaaataggatcggaggtagtatt 193  Q
    ||||||||||||| ||| |||||||| |||||||| |||||| ||||||    
T  41478685 acttttgttgacccaaaattctcttataaataggaccggagggagtatt 41478637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 101; Significance: 4e-50; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 73 - 193
Target Start/End: Original strand, 8382981 - 8383101
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  8382981 tcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttata 8383080  T
Q  173 aataggatcggaggtagtatt 193  Q
    ||||||| |||||||||||||    
T  8383081 aataggaccggaggtagtatt 8383101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 73 - 192
Target Start/End: Complemental strand, 2830453 - 2830334
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  2830453 tcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttata 2830354  T
Q  173 aataggatcggaggtagtat 192  Q
    ||||||| ||||||||||||    
T  2830353 aataggaccggaggtagtat 2830334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 73 - 192
Target Start/End: Original strand, 11572157 - 11572276
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  11572157 tcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttata 11572256  T
Q  173 aataggatcggaggtagtat 192  Q
    ||||||| ||||||||||||    
T  11572257 aataggaccggaggtagtat 11572276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 73 - 191
Target Start/End: Complemental strand, 6330233 - 6330115
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  6330233 tcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttata 6330134  T
Q  173 aataggatcggaggtagta 191  Q
    ||||||| |||||||||||    
T  6330133 aataggaccggaggtagta 6330115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 73 - 191
Target Start/End: Complemental strand, 26602441 - 26602323
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  26602441 tcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttata 26602342  T
Q  173 aataggatcggaggtagta 191  Q
    ||||||| |||||||||||    
T  26602341 aataggaccggaggtagta 26602323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 73 - 193
Target Start/End: Original strand, 13853605 - 13853725
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  13853605 tcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttata 13853704  T
Q  173 aataggatcggaggtagtatt 193  Q
    ||||||| || ||||||||||    
T  13853705 aataggaccgaaggtagtatt 13853725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 73 - 193
Target Start/End: Original strand, 33052806 - 33052926
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||||||| |||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  33052806 tcctatttataagagaattttgggtcaataaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttata 33052905  T
Q  173 aataggatcggaggtagtatt 193  Q
    ||||||| |||||||||||||    
T  33052906 aataggaccggaggtagtatt 33052926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 73 - 192
Target Start/End: Complemental strand, 8099648 - 8099529
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |    
T  8099648 tcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttgttgacctaaatttctcttata 8099549  T
Q  173 aataggatcggaggtagtat 192  Q
    ||||||| ||||||||||||    
T  8099548 aataggaccggaggtagtat 8099529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 78 - 192
Target Start/End: Complemental strand, 6143667 - 6143553
Alignment:
Q  78 tttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttacaaatag 177  Q
    |||||||||||||||| || |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  6143667 tttataagagaattttgggacaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttgttgacctaaatttctcttataaatag 6143568  T
Q  178 gatcggaggtagtat 192  Q
    |||||||||||||||    
T  6143567 gatcggaggtagtat 6143553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 73 - 192
Target Start/End: Original strand, 35031013 - 35031132
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||| |    
T  35031013 tcctatttataagagaattttgggtcaacaaaaattgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttttcttata 35031112  T
Q  173 aataggatcggaggtagtat 192  Q
    ||||||| ||||||||||||    
T  35031113 aataggaccggaggtagtat 35031132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 73 - 191
Target Start/End: Complemental strand, 9644814 - 9644696
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||||||| |    
T  9644814 tcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttatgttgacctaaatttctcttata 9644715  T
Q  173 aataggatcggaggtagta 191  Q
    ||||||| |||||||||||    
T  9644714 aataggaccggaggtagta 9644696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 73 - 191
Target Start/End: Complemental strand, 9650831 - 9650713
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||||||| |    
T  9650831 tcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttatgttgacctaaatttctcttata 9650732  T
Q  173 aataggatcggaggtagta 191  Q
    ||||||| |||||||||||    
T  9650731 aataggaccggaggtagta 9650713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 73 - 193
Target Start/End: Complemental strand, 6068684 - 6068564
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| ||||||||||||||||  |||||||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||||||||||| ||||| |    
T  6068684 tcctatttataagagaattttgagtcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttattgacctaaatttttcttata 6068585  T
Q  173 aataggatcggaggtagtatt 193  Q
    ||||||| |||||||||||||    
T  6068584 aataggaccggaggtagtatt 6068564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 73 - 193
Target Start/End: Original strand, 8417805 - 8417925
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |    
T  8417805 tcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttgttgacctaaatttctcttata 8417904  T
Q  173 aataggatcggaggtagtatt 193  Q
    |||| || | |||| ||||||    
T  8417905 aataagaccagagggagtatt 8417925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 73 - 175
Target Start/End: Original strand, 28747146 - 28747248
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||| |    
T  28747146 tcctatttataagagaattttgggtcaacaaaagttgatgtatctaattaaaaattcagtccaaatacattcacttttgttgatctaaatttctcttata 28747245  T
Q  173 aat 175  Q
    |||    
T  28747246 aat 28747248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 99 - 191
Target Start/End: Complemental strand, 13043850 - 13043758
Alignment:
Q  99 aacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttacaaataggatcggaggtagta 191  Q
    ||||||||||||||||| |||||||||||||| | |||||||||||| |||||||||||||||||||||||| |||||| | |||||||||||    
T  13043850 aacaaaagttgatgtatctagttaaaaattcaattcaaatacattcatttttgttgacctaaatttctcttataaatagaaccggaggtagta 13043758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 73 - 161
Target Start/End: Complemental strand, 17992106 - 17992018
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaa 161  Q
    |||| |||||||||||||||| ||||||||||| | ||||||| |||||||||||||| ||||||||||||||||||| ||||||||||    
T  17992106 tcctatttataagagaattttgggtcaacaaaaatcgatgtatctagttaaaaattcaatccaaatacattcacttttattgacctaaa 17992018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 73 - 191
Target Start/End: Complemental strand, 22896580 - 22896471
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||         |||||||||||| |||||||| |    
T  22896580 tcctatttataagagaattttttgtcaacaaaagttgatgtatctagttaaaaattcagtccaaatac---------tgttgacctaaacttctcttata 22896490  T
Q  173 aataggatcggaggtagta 191  Q
    ||||||| |||||| ||||    
T  22896489 aataggaccggagggagta 22896471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 78 - 193
Target Start/End: Complemental strand, 3788150 - 3788034
Alignment:
Q  78 tttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttg-ttgacctaaatttctcttacaaata 176  Q
    ||||||||| || ||| ||||||||||||||||||||||||||||| ||||||||||| || ||   | ||||| |||||| || ||||||||| |||||    
T  3788150 tttataagataaatttaggtcaacaaaagttgatgtatttagttaacaattcagtccacatccaacaaattttgattgacccaactttctcttataaata 3788051  T
Q  177 ggatcggaggtagtatt 193  Q
    |||||| ||| ||||||    
T  3788050 ggatcgtagggagtatt 3788034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 95 - 179
Target Start/End: Original strand, 6068974 - 6069058
Alignment:
Q  95 ggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttacaaatagga 179  Q
    |||||||||||| ||| ||||  ||||||||||| || ||||||||||| |||||||||||||||||| ||| ||| ||||||||    
T  6068974 ggtcaacaaaagatgaagtatcgagttaaaaatttagaccaaatacattaacttttgttgacctaaatatcttttataaatagga 6069058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 72 - 192
Target Start/End: Original strand, 7596988 - 7597108
Alignment:
Q  72 atcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttac 171  Q
    ||||| |||||| ||||| |||  ||||| ||||||||||||||||||||||||||||||| |  ||||||  ||||||||| ||  || |||||||||     
T  7596988 atcctatttataggagaaatttgagtcaataaaagttgatgtatttagttaaaaattcagttcggatacatcaacttttgttaacacaactttctcttat 7597087  T
Q  172 aaataggatcggaggtagtat 192  Q
    ||||| ||| ||||| |||||    
T  7597088 aaataagattggagggagtat 7597108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 78 - 170
Target Start/End: Complemental strand, 6549995 - 6549904
Alignment:
Q  78 tttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctctta 170  Q
    |||||||||||  ||||||| ||||||||||||||||| ||||  ||| ||   || ||||||||| ||||||||||||||||||||||||||    
T  6549995 tttataagagatattttggttaacaaaagttgatgtatctagtccaaattttcatc-aaatacattaacttttgttgacctaaatttctctta 6549904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 95 - 179
Target Start/End: Original strand, 14936491 - 14936575
Alignment:
Q  95 ggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttacaaatagga 179  Q
    |||||||||||| |||||||| ||||||| ||||   |||||||||||  ||| ||||||||| |||| ||||||| ||||||||    
T  14936491 ggtcaacaaaaggtgatgtatctagttaagaatttgttccaaatacatcaactattgttgacccaaatatctcttataaatagga 14936575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 135 - 192
Target Start/End: Original strand, 3788111 - 3788168
Alignment:
Q  135 aaatacattcacttttgttgacctaaatttctcttacaaataggatcggaggtagtat 192  Q
    ||||||||  |||||||||||||||||||| ||||| ||||| || |||||| |||||    
T  3788111 aaatacatcaacttttgttgacctaaatttatcttataaataagaccggagggagtat 3788168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 145 - 194
Target Start/End: Original strand, 8099614 - 8099663
Alignment:
Q  145 acttttgttgacctaaatttctcttacaaataggatcggaggtagtattt 194  Q
    ||||||||||||| ||| |||||||| |||||||| |||||| |||||||    
T  8099614 acttttgttgacccaaaattctcttataaataggaccggagggagtattt 8099663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 145 - 194
Target Start/End: Original strand, 9644780 - 9644829
Alignment:
Q  145 acttttgttgacctaaatttctcttacaaataggatcggaggtagtattt 194  Q
    ||||||||||||| ||| |||||||| |||||||| |||||| |||||||    
T  9644780 acttttgttgacccaaaattctcttataaataggaccggagggagtattt 9644829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 145 - 194
Target Start/End: Original strand, 9650797 - 9650846
Alignment:
Q  145 acttttgttgacctaaatttctcttacaaataggatcggaggtagtattt 194  Q
    ||||||||||||| ||| |||||||| |||||||| |||||| |||||||    
T  9650797 acttttgttgacccaaaattctcttataaataggaccggagggagtattt 9650846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 117
Target Start/End: Original strand, 6143562 - 6143610
Alignment:
Q  69 ccgatcctttttataagagaatttttggtcaacaaaagttgatgtattt 117  Q
    |||||||| |||||||||||| ||| |||||||||||||  ||||||||    
T  6143562 ccgatcctatttataagagaaatttaggtcaacaaaagtgaatgtattt 6143610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 193
Target Start/End: Original strand, 26602407 - 26602455
Alignment:
Q  145 acttttgttgacctaaatttctcttacaaataggatcggaggtagtatt 193  Q
    ||||||||||||| ||| |||||||| |||||||| |||||| ||||||    
T  26602407 acttttgttgacccaaaattctcttataaataggaccggagggagtatt 26602455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 101; Significance: 4e-50; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 73 - 193
Target Start/End: Original strand, 27159370 - 27159490
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  27159370 tcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttata 27159469  T
Q  173 aataggatcggaggtagtatt 193  Q
    ||||||| |||||||||||||    
T  27159470 aataggaccggaggtagtatt 27159490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 73 - 193
Target Start/End: Original strand, 44668105 - 44668225
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  44668105 tcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttata 44668204  T
Q  173 aataggatcggaggtagtatt 193  Q
    ||||||| |||||||||||||    
T  44668205 aataggaccggaggtagtatt 44668225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 73 - 192
Target Start/End: Complemental strand, 9981765 - 9981646
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  9981765 tcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttata 9981666  T
Q  173 aataggatcggaggtagtat 192  Q
    ||||||| ||||||||||||    
T  9981665 aataggaccggaggtagtat 9981646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 73 - 195
Target Start/End: Complemental strand, 14984955 - 14984833
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  14984955 tcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttata 14984856  T
Q  173 aataggatcggaggtagtatttg 195  Q
    ||||||| ||||| |||||||||    
T  14984855 aataggaccggagatagtatttg 14984833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 73 - 191
Target Start/End: Original strand, 31842807 - 31842925
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  31842807 tcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttata 31842906  T
Q  173 aataggatcggaggtagta 191  Q
    ||||||| |||||||||||    
T  31842907 aataggaccggaggtagta 31842925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 73 - 191
Target Start/End: Original strand, 39401978 - 39402096
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  39401978 tcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttata 39402077  T
Q  173 aataggatcggaggtagta 191  Q
    ||||||| |||||||||||    
T  39402078 aataggaccggaggtagta 39402096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 73 - 194
Target Start/End: Complemental strand, 11796051 - 11795930
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||| |    
T  11796051 tcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatgcattcacttttgttgacctaaatttctcttata 11795952  T
Q  173 aataggatcggaggtagtattt 194  Q
    ||||||| ||||||||||||||    
T  11795951 aataggaccggaggtagtattt 11795930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 78 - 191
Target Start/End: Original strand, 47216716 - 47216829
Alignment:
Q  78 tttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttacaaatag 177  Q
    |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  47216716 tttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaatag 47216815  T
Q  178 gatcggaggtagta 191  Q
    || |||||||||||    
T  47216816 gaccggaggtagta 47216829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 73 - 193
Target Start/End: Original strand, 12483640 - 12483760
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| |    
T  12483640 tcctatttataagagaattttgggtcaacaaaagttgatgtatttagttcaaaattcagtctaaatacattcacttttgttgacctaaatttctcttata 12483739  T
Q  173 aataggatcggaggtagtatt 193  Q
    ||||||| |||||||||||||    
T  12483740 aataggaccggaggtagtatt 12483760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 73 - 193
Target Start/End: Original strand, 26471077 - 26471197
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||||||| | ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  26471077 tcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttata 26471176  T
Q  173 aataggatcggaggtagtatt 193  Q
    ||||||| |||||||||||||    
T  26471177 aataggaccggaggtagtatt 26471197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 78 - 192
Target Start/End: Complemental strand, 34042809 - 34042695
Alignment:
Q  78 tttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttacaaatag 177  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  34042809 tttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaatag 34042710  T
Q  178 gatcggaggtagtat 192  Q
    || ||||||||||||    
T  34042709 gaccggaggtagtat 34042695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 73 - 191
Target Start/End: Original strand, 44955218 - 44955336
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||| |    
T  44955218 tcctatttataagagaattttaggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttttcttata 44955317  T
Q  173 aataggatcggaggtagta 191  Q
    ||||||| |||||||||||    
T  44955318 aataggaccggaggtagta 44955336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 73 - 191
Target Start/End: Complemental strand, 1051006 - 1050888
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||||||| ||||||| ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||| |    
T  1051006 tcctatttataagagaattttgggtcaactaaagttgatgtatctagttaaaaattcagtccaaatgcattcacttttgttgacctaaatttctcttata 1050907  T
Q  173 aataggatcggaggtagta 191  Q
    ||||||| |||||||||||    
T  1050906 aataggaccggaggtagta 1050888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 81 - 191
Target Start/End: Original strand, 23278021 - 23278131
Alignment:
Q  81 ataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttacaaataggat 180  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||     
T  23278021 ataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggac 23278120  T
Q  181 cggaggtagta 191  Q
    |||||||||||    
T  23278121 cggaggtagta 23278131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 73 - 191
Target Start/End: Original strand, 47777493 - 47777611
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| |    
T  47777493 tcctatttataagagaattttgggtcaacaaaagttgatgtatctagttcaaaattcagtccaaatacattcacttttgttgacctaaatttctcttata 47777592  T
Q  173 aataggatcggaggtagta 191  Q
    ||||||| ||| |||||||    
T  47777593 aataggaccgggggtagta 47777611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 78 - 193
Target Start/End: Original strand, 47588354 - 47588469
Alignment:
Q  78 tttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttacaaatag 177  Q
    |||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||     
T  47588354 tttataagagaattttgggtcaacaaaagttgatgtatctaattaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataa 47588453  T
Q  178 gatcggaggtagtatt 193  Q
    || | |||||||||||    
T  47588454 gaccagaggtagtatt 47588469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 73 - 193
Target Start/End: Complemental strand, 25694437 - 25694317
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| |||| |||||||||||||| |    
T  25694437 tcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttattgatctaaatttctcttata 25694338  T
Q  173 aataggatcggaggtagtatt 193  Q
    ||||||||| |||| ||||||    
T  25694337 aataggatcagagggagtatt 25694317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 73 - 192
Target Start/End: Complemental strand, 17556871 - 17556751
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaataca-ttcacttttgttgacctaaatttctcttac 171  Q
    |||| ||||||||||||  || ||||||||||||||||||||| ||||||||||||||||||||||||| || |||||||||||||||| |||||||||     
T  17556871 tcctatttataagagaaacttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacatttaacttttgttgacctaactttctcttat 17556772  T
Q  172 aaataggatcggaggtagtat 192  Q
    |||||||| | |||| |||||    
T  17556771 aaataggaccagagggagtat 17556751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 73 - 185
Target Start/End: Complemental strand, 47969813 - 47969700
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctc-ttac 171  Q
    |||| ||||||| | |||||| | ||||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||| |||     
T  47969813 tcctatttataaaataattttggatcaacaaaagttgatgtatctagttaaaaattcagtctaaatacatttacttttgttgacctaaatttctctttat 47969714  T
Q  172 aaataggatcggag 185  Q
    |||||||| |||||    
T  47969713 aaataggaccggag 47969700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 73 - 192
Target Start/End: Complemental strand, 11897172 - 11897053
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||| ||| |||||||||||||||||||||   |||||||||||||| || ||||||  |||||||||||||||| ||||||||| |    
T  11897172 tcctatttataagagaaatttgggtcaacaaaagttgatgtatccggttaaaaattcagttcagatacatcaacttttgttgacctaactttctcttata 11897073  T
Q  173 aataggatcggaggtagtat 192  Q
    ||||||| |||||| |||||    
T  11897072 aataggaccggagggagtat 11897053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 78 - 192
Target Start/End: Original strand, 16448125 - 16448239
Alignment:
Q  78 tttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttacaaatag 177  Q
    |||||| | |||| || |||||||||||||| |||||| | ||| ||||||||||||| ||||||  ||||||||||||| || ||||||||| ||||||    
T  16448125 tttataggggaatattgggtcaacaaaagtttatgtatctggttcaaaattcagtccagatacatcaacttttgttgacccaactttctcttataaatag 16448224  T
Q  178 gatcggaggtagtat 192  Q
    || |||||| |||||    
T  16448225 gaccggagggagtat 16448239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 73 - 176
Target Start/End: Original strand, 12213486 - 12213589
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| ||||| ||||||  || ||||||||||| ||||| |||||||||||||||||| || ||||||||| | ||||||||||||||  |||||||| |    
T  12213486 tcctatttattagagaaacttgggtcaacaaaaattgatttatttagttaaaaattcaatctaaatacattaatttttgttgacctaacattctcttata 12213585  T
Q  173 aata 176  Q
    ||||    
T  12213586 aata 12213589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 73 - 181
Target Start/End: Complemental strand, 11989899 - 11989791
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| ||||||| |||| |||  ||||| |||| ||||||||||| ||||||||||||||||||||| |||   ||||||||||| || ||||||||| |    
T  11989899 tcctatttataaaagaaatttgagtcaataaaaattgatgtatttggttaaaaattcagtccaaatatattagtttttgttgacccaactttctcttata 11989800  T
Q  173 aataggatc 181  Q
    |||| ||||    
T  11989799 aataagatc 11989791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 67 - 191
Target Start/End: Complemental strand, 37552265 - 37552141
Alignment:
Q  67 ccccgatcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 166  Q
    ||||| |||| |||||||||||| ||| ||||||||||| |  |||||| | ||||||||||||||||| ||||||  ||| ||||||||  || ||| |    
T  37552265 ccccggtcctatttataagagaaatttgggtcaacaaaaatgaatgtatctggttaaaaattcagtccagatacatgaactgttgttgactcaactttat 37552166  T
Q  167 cttacaaataggatcggaggtagta 191  Q
    |||| |||||||| |||||| ||||    
T  37552165 cttataaataggaccggagggagta 37552141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 142
Target Start/End: Original strand, 1598390 - 1598461
Alignment:
Q  69 ccgatcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacat 142  Q
    |||||||| |||||||||||| | | ||||||||||| ||||||||| | ||||||||||||||||||||||||    
T  1598390 ccgatcctatttataagagaaatat-ggtcaacaaaaattgatgtatat-gttaaaaattcagtccaaatacat 1598461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 78 - 157
Target Start/End: Complemental strand, 571620 - 571542
Alignment:
Q  78 tttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacc 157  Q
    |||||| |||||| |||| |||||||||||| |||||  ||||| ||||||||||| ||||||| | |||||||||||||    
T  571620 tttataggagaatatttgatcaacaaaagttaatgtacctagttcaaaattcagtctaaataca-taacttttgttgacc 571542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 145 - 195
Target Start/End: Original strand, 11897138 - 11897188
Alignment:
Q  145 acttttgttgacctaaatttctcttacaaataggatcggaggtagtatttg 195  Q
    ||||||||||||| |||||||||||| |||||||| |||||| ||||||||    
T  11897138 acttttgttgacccaaatttctcttataaataggaccggagggagtatttg 11897188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 157
Target Start/End: Complemental strand, 3739902 - 3739838
Alignment:
Q  93 ttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacc 157  Q
    |||||||||||||||| |||||||| ||||||||||    ||||||||||| ||||| |||||||    
T  3739902 ttggtcaacaaaagttaatgtatttggttaaaaatttgtaccaaatacattaactttcgttgacc 3739838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 73 - 193
Target Start/End: Complemental strand, 12483746 - 12483626
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||| ||| |||||||||||||  ||||||||||    || ||    | ||||||||  ||||||||||||| ||| |||||||| |    
T  12483746 tcctatttataagagaaatttaggtcaacaaaagtgaatgtatttagactgaattttgaactaaatacatcaacttttgttgacccaaaattctcttata 12483647  T
Q  173 aataggatcggaggtagtatt 193  Q
    ||||||| |||||| ||||||    
T  12483646 aataggaccggagggagtatt 12483626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 137 - 192
Target Start/End: Original strand, 37552217 - 37552272
Alignment:
Q  137 atacattcacttttgttgacctaaatttctcttacaaataggatcggaggtagtat 192  Q
    ||||||||| ||||||||||| |||||||||||| |||||||| ||| || |||||    
T  37552217 atacattcatttttgttgacccaaatttctcttataaataggaccggggggagtat 37552272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 73 - 156
Target Start/End: Complemental strand, 48051021 - 48050938
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgac 156  Q
    ||||||||||||||||    ||||||||| ||||||||||||||| ||| | |||   | ||||||||||| ||||||||||||    
T  48051021 tcctttttataagagacaaattggtcaactaaagttgatgtatttggttcataatgtggaccaaatacatttacttttgttgac 48050938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 126
Target Start/End: Complemental strand, 5392257 - 5392211
Alignment:
Q  80 tataagagaatttttggtcaacaaaagttgatgtatttagttaaaaa 126  Q
    |||||||||| ||| |||||| |||||||||||||||| ||||||||    
T  5392257 tataagagaaatttaggtcaataaaagttgatgtatttggttaaaaa 5392211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 155
Target Start/End: Original strand, 29855084 - 29855142
Alignment:
Q  97 tcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttga 155  Q
    ||||||||||||||||||||| ||||||||||    | ||||||||| |||||||||||    
T  29855084 tcaacaaaagttgatgtatttggttaaaaatttgtacgaaatacattaacttttgttga 29855142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 99 - 168
Target Start/End: Complemental strand, 11774605 - 11774536
Alignment:
Q  99 aacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctct 168  Q
    |||||||||||| |||| ||||| ||||||||||  || |||||  | |||||||||||||| |||||||    
T  11774605 aacaaaagttgacgtatctagttcaaaattcagtttaattacatcaatttttgttgacctaactttctct 11774536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 97 - 182
Target Start/End: Complemental strand, 12043697 - 12043613
Alignment:
Q  97 tcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttacaaataggatcg 182  Q
    ||||||||| || |||||| | |||||||||| | || ||||||||  |||||||||||| ||||| ||| ||| |||||||||||    
T  12043697 tcaacaaaaattaatgtatcttgttaaaaattgaatc-aaatacatcaacttttgttgacttaaatatcttttataaataggatcg 12043613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 193
Target Start/End: Original strand, 14984921 - 14984969
Alignment:
Q  145 acttttgttgacctaaatttctcttacaaataggatcggaggtagtatt 193  Q
    ||||||||||||| ||| |||||||| |||||||| |||||| ||||||    
T  14984921 acttttgttgacccaaaattctcttataaataggaccggagggagtatt 14984969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 185
Target Start/End: Complemental strand, 44955252 - 44955212
Alignment:
Q  145 acttttgttgacctaaatttctcttacaaataggatcggag 185  Q
    ||||||||||||||||| |||||||| |||||||| |||||    
T  44955252 acttttgttgacctaaaattctcttataaataggaccggag 44955212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0482 (Bit Score: 97; Significance: 9e-48; HSPs: 1)
Name: scaffold0482
Description:

Target: scaffold0482; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 73 - 193
Target Start/End: Complemental strand, 12978 - 12858
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  12978 tcctatttataagagaattttgggtcagcaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttata 12879  T
Q  173 aataggatcggaggtagtatt 193  Q
    ||||||| |||||||||||||    
T  12878 aataggaccggaggtagtatt 12858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 97; Significance: 9e-48; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 73 - 193
Target Start/End: Complemental strand, 23903 - 23783
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| ||||||||| |||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  23903 tcctatttataagaaaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttata 23804  T
Q  173 aataggatcggaggtagtatt 193  Q
    ||||||| |||||||||||||    
T  23803 aataggaccggaggtagtatt 23783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1707 (Bit Score: 96; Significance: 4e-47; HSPs: 1)
Name: scaffold1707
Description:

Target: scaffold1707; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 73 - 192
Target Start/End: Complemental strand, 1453 - 1334
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  1453 tcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttata 1354  T
Q  173 aataggatcggaggtagtat 192  Q
    ||||||| |||| |||||||    
T  1353 aataggaccggatgtagtat 1334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 73 - 191
Target Start/End: Original strand, 6143 - 6261
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| ||||||||| |||||| ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||| |    
T  6143 tcctatttataagaaaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccacatacattcacttttgttgacctaaatttctcttata 6242  T
Q  173 aataggatcggaggtagta 191  Q
    ||||||| |||||||||||    
T  6243 aataggaccggaggtagta 6261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 73 - 191
Target Start/End: Original strand, 231315 - 231433
Alignment:
Q  73 tcctttttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaca 172  Q
    |||| |||||| |||||| || ||||||||||||||||| ||  ||||| ||||||||||||| ||||||  ||||||||||| | || ||||||||| |    
T  231315 tcctatttataggagaatattaggtcaacaaaagttgatatacctagttcaaaattcagtccagatacataaacttttgttgatccaactttctcttata 231414  T
Q  173 aataggatcggaggtagta 191  Q
    | |||||||||||| ||||    
T  231415 attaggatcggagggagta 231433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0650 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 96 - 157
Target Start/End: Original strand, 20 - 81
Alignment:
Q  96 gtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacc 157  Q
    |||||||||||||||||||||| |||||||||| |||||||||||||  |||||||||||||    
T  20 gtcaacaaaagttgatgtatttggttaaaaatttagtccaaatacatcaacttttgttgacc 81  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0415 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0415
Description:

Target: scaffold0415; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 97 - 179
Target Start/End: Original strand, 13761 - 13844
Alignment:
Q  97 tcaacaaaagtt--gatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttacaaatagga 179  Q
    ||||||||||||  |||||||| ||||||||||||||| |||||| ||| | |||||||||||||||||||||||| || |||||    
T  13761 tcaacaaaagttttgatgtatt-agttaaaaattcagttcaaatatattaatttttgttgacctaaatttctcttataagtagga 13844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 162
Target Start/End: Complemental strand, 312831 - 312747
Alignment:
Q  78 tttataagagaatttttggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaat 162  Q
    |||| |||||| |||||| ||||||||| ||||||||| ||||| ||||||  |  || ||||||| ||||||||||||| ||||    
T  312831 tttaaaagagactttttgatcaacaaaaattgatgtatctagtttaaaatttggatcagatacattaacttttgttgaccaaaat 312747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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