View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1172_low_21 (Length: 535)

Name: NF1172_low_21
Description: NF1172
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1172_low_21
NF1172_low_21
[»] chr4 (16 HSPs)
chr4 (98-528)||(38485258-38485688)
chr4 (98-473)||(22180877-22181259)
chr4 (98-473)||(4168409-4168792)
chr4 (101-473)||(27764294-27764679)
chr4 (139-473)||(18923351-18923690)
chr4 (98-473)||(21097191-21097552)
chr4 (98-224)||(637905-638031)
chr4 (257-458)||(45256160-45256359)
chr4 (98-218)||(26447306-26447426)
chr4 (98-217)||(51836985-51837105)
chr4 (98-217)||(45256026-45256145)
chr4 (257-395)||(51836831-51836972)
chr4 (98-186)||(36621627-36621715)
chr4 (98-162)||(50563679-50563743)
chr4 (257-303)||(638035-638081)
chr4 (257-303)||(26447248-26447294)
[»] chr8 (17 HSPs)
chr8 (98-473)||(39022026-39022409)
chr8 (98-473)||(32987083-32987459)
chr8 (98-474)||(15260479-15260865)
chr8 (98-223)||(8550555-8550682)
chr8 (98-217)||(4836596-4836715)
chr8 (98-217)||(4842041-4842160)
chr8 (98-217)||(7058165-7058284)
chr8 (98-186)||(7614119-7614207)
chr8 (123-217)||(2750101-2750195)
chr8 (175-223)||(1208829-1208877)
chr8 (257-300)||(39658382-39658425)
chr8 (98-162)||(15181842-15181906)
chr8 (257-296)||(4836544-4836583)
chr8 (257-296)||(4841989-4842028)
chr8 (190-223)||(39658430-39658463)
chr8 (257-300)||(1208882-1208925)
chr8 (257-304)||(8550687-8550734)
[»] scaffold0194 (1 HSPs)
scaffold0194 (98-473)||(27658-28035)
[»] scaffold0097 (1 HSPs)
scaffold0097 (98-473)||(13664-14041)
[»] chr2 (9 HSPs)
chr2 (98-473)||(20709825-20710202)
chr2 (257-458)||(18297788-18297993)
chr2 (98-217)||(25192943-25193062)
chr2 (98-217)||(18298006-18298125)
chr2 (175-217)||(4579721-4579763)
chr2 (257-299)||(4579666-4579708)
chr2 (98-162)||(4281738-4281802)
chr2 (98-162)||(25995338-25995402)
chr2 (258-288)||(25193076-25193106)
[»] chr1 (11 HSPs)
chr1 (98-472)||(23319717-23320099)
chr1 (100-473)||(45889649-45890033)
chr1 (98-473)||(18056835-18057236)
chr1 (98-217)||(22348090-22348209)
chr1 (98-217)||(179659-179778)
chr1 (102-217)||(8402206-8402321)
chr1 (98-186)||(30802447-30802535)
chr1 (98-162)||(37639393-37639457)
chr1 (257-293)||(22348222-22348258)
chr1 (257-303)||(8402145-8402191)
chr1 (98-162)||(35198131-35198195)
[»] chr3 (18 HSPs)
chr3 (98-473)||(8718152-8718543)
chr3 (98-473)||(9070039-9070430)
chr3 (257-458)||(7044978-7045183)
chr3 (257-457)||(51362120-51362321)
chr3 (98-255)||(39099248-39099409)
chr3 (98-223)||(50754057-50754182)
chr3 (98-217)||(52987545-52987664)
chr3 (98-217)||(7045196-7045314)
chr3 (98-217)||(51362334-51362452)
chr3 (98-215)||(19385212-19385329)
chr3 (257-458)||(19385005-19385201)
chr3 (98-184)||(16277342-16277428)
chr3 (257-305)||(52987484-52987532)
chr3 (98-146)||(17627197-17627245)
chr3 (183-217)||(31852242-31852276)
chr3 (98-162)||(23699379-23699443)
chr3 (98-162)||(23717834-23717898)
chr3 (98-162)||(23736290-23736354)
[»] chr7 (16 HSPs)
chr7 (98-473)||(46024078-46024461)
chr7 (98-445)||(30428924-30429276)
chr7 (98-215)||(46573397-46573514)
chr7 (257-458)||(46573177-46573382)
chr7 (98-217)||(15974831-15974950)
chr7 (98-186)||(33797982-33798070)
chr7 (257-300)||(28396897-28396940)
chr7 (257-300)||(48691167-48691210)
chr7 (175-217)||(48305356-48305398)
chr7 (175-217)||(48691112-48691154)
chr7 (98-162)||(5757438-5757502)
chr7 (102-162)||(32090633-32090693)
chr7 (257-300)||(48305411-48305454)
chr7 (175-217)||(28396842-28396884)
chr7 (257-303)||(15974772-15974818)
chr7 (98-143)||(48691043-48691088)
[»] chr5 (13 HSPs)
chr5 (98-473)||(13362821-13363211)
chr5 (98-473)||(23335335-23335721)
chr5 (159-472)||(25016873-25017185)
chr5 (100-223)||(2826956-2827079)
chr5 (150-255)||(42512277-42512384)
chr5 (98-208)||(28070057-28070167)
chr5 (334-458)||(28069858-28069983)
chr5 (98-163)||(16668743-16668808)
chr5 (98-162)||(18465506-18465570)
chr5 (98-148)||(25017181-25017231)
chr5 (175-223)||(34329247-34329293)
chr5 (257-313)||(28069989-28070045)
chr5 (260-300)||(34329301-34329341)
[»] chr6 (9 HSPs)
chr6 (98-223)||(24737580-24737705)
chr6 (98-217)||(33346266-33346385)
chr6 (98-223)||(877259-877384)
chr6 (257-305)||(24737527-24737575)
chr6 (100-162)||(29157279-29157341)
chr6 (98-162)||(18611240-18611304)
chr6 (257-296)||(33346214-33346253)
chr6 (258-296)||(877387-877425)
chr6 (98-146)||(34399692-34399740)
[»] scaffold0238 (2 HSPs)
scaffold0238 (98-196)||(25148-25246)
scaffold0238 (257-311)||(25053-25107)


Alignment Details
Target: chr4 (Bit Score: 284; Significance: 1e-159; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 98 - 528
Target Start/End: Complemental strand, 38485688 - 38485258
Alignment:
Q  98 tcacaaccatcagatctactatacacgtgtaataattttaggcttctcaaaatacactaaatcaaacttcatttgcttcaaacatttctctcactaaaa- 196  Q
    |||||||||||||||||| | |||||||||||||||  |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||     
T  38485688 tcacaaccatcagatctaatgtacacgtgtaataatcctaggcttctcaaaatacattaaatcaaacttcatttgcttcaaacatttctctcactaaaaa 38485589  T
Q  197 -cataaagctctccctctctct--acaattttcaacattctggaaaagaaaacgaagaactcgt--gagtcttcatctcttccggccacacatgatgttt 291  Q
     ||||||| |||||||||||||  ||||||||||| ||| ||||||| |||||||| ||||| |  ||||||||||||||||||||||||||| ||  ||    
T  38485588 acataaagatctccctctctctctacaattttcaatattatggaaaaaaaaacgaaaaactcatatgagtcttcatctcttccggccacacataataatt 38485489  T
Q  292 ccggcacggtggtcaccggccaaaggcggcggcactgctgtaccggagaaccaaactcacccttttttaaaaacccatttttcaacatccattttcgttt 391  Q
    |||||||||||||| |||||||||||||||     ||| |||||| | ||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  38485488 ccggcacggtggtcgccggccaaaggcggc-----tgccgtaccgaaaaaccaaactcacccttttt-aaaaacccatttttcaacatccattttcgttt 38485395  T
Q  392 taaagtcaaattcgaactcggatcacgcaaaaacacaacgagaaagagtagatgtaaagattaaaacacaaacgaaattttcaaaatgaataaacataga 491  Q
    ||||| |||||||||||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  38485394 taaagccaaattcgaactcggatcacgcaaaaacacaatgagaatgagtagatttaaagattaaaacacaaacgaaattttcaaaatgaataaacataga 38485295  T
Q  492 atcctaaatagtggttattttctttctagtataatct 528  Q
    ||||||||||||| |||||||||||||||||||||||    
T  38485294 atcctaaatagtgattattttctttctagtataatct 38485258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 98 - 473
Target Start/End: Complemental strand, 22181259 - 22180877
Alignment:
Q  98 tcacaaccatcagatctactatacacgtgtaataattttaggcttctcaaaatacactaaatcaaacttcatttgcttcaaacatttctctcactaaaac 197  Q
    ||||||||||||||| || | |||||||||||||||  |||| |||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||    
T  22181259 tcacaaccatcagatttagtgtacacgtgtaataatcctaggtttctcaaactacaccaaatcaaacttcatttgcctcaaacatttctctcactaaaac 22181160  T
Q  198 ataaagctctccctctctct--acaattttcaacattctggaaaagaaaacgaagaactcg--tgagtcttcatctcttccggccacacatgatgtttcc 293  Q
    |||||||| | |||||||||  ||||||| ||||||||||||||||||||||||||||||   ||||| |||||||||||||||||||||||||| |||     
T  22181159 ataaagcttttcctctctctctacaattt-caacattctggaaaagaaaacgaagaactcaaatgagttttcatctcttccggccacacatgatgattct 22181061  T
Q  294 ggcacggtggtcaccggccaaaggcggcggcactgctgtaccggagaaccaaactcacccttttttaaaa----acccatttttcaacatccattttcgt 389  Q
    ||| |||||||| ||||||| ||||||||||||  | |||| ||||||||||||||||||||||| ||||    | ||||||||||||||||||||||||    
T  22181060 ggcgcggtggtcgccggccagaggcggcggcaccaccgtactggagaaccaaactcaccctttttaaaaactaaagccatttttcaacatccattttcgt 22180961  T
Q  390 tttaaagtcaaattcgaactcggatcacgcaaaaacacaacgagaaagagtagatgtaaagattaaaacacaaacgaaattttc 473  Q
    ||||||| ||||| |||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  22180960 tttaaagccaaatccgaactcggatcgcgcaaaaacacaacgagaaggagtagatctaaagattaaaacacaaacgaaattttc 22180877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 98 - 473
Target Start/End: Original strand, 4168409 - 4168792
Alignment:
Q  98 tcacaaccatcagatctactatacacgtgtaataattttaggcttctcaaaatacactaaatcaaacttcatttgcttcaaacatttctctcactaaaac 197  Q
    |||||||||||||||||| | ||||| |||||||||  |||| |||||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  4168409 tcacaaccatcagatctagtgtacacatgtaataatcctaggtttctcaaactacaccaaatcaaacttcatttgtttcaaacatttctctcactaaaac 4168508  T
Q  198 ataaagctctccctct--ctctacaattttcaacattctggaaaagaaaacgaagaactcg--tgagtcttcatctcttccggccacacatgatgtttcc 293  Q
    |||||||| || ||||  ||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||| ||||    
T  4168509 ataaagctttcactctatctctacaattttcaacattctggaaaagaaaacgaagaactcagatgagtcttcatctcttccggccacacatgatgattcc 4168608  T
Q  294 ggcacggtggtcaccggccaaaggcggcggcactgctgtaccggagaaccaaactcacccttttttaaaa----acccatttttcaacatccattttcgt 389  Q
        |||||||  ||||||| |||| |||||   || || | ||||||||||||||||||||||| ||||    | ||||||||||||||||||||||||    
T  4168609 actgcggtggttgccggccagaggcagcggcggcgccgtgctggagaaccaaactcaccctttttaaaaactaaagccatttttcaacatccattttcgt 4168708  T
Q  390 tttaaagtcaaattcgaactcggatcacgcaaaaacacaacgagaaagagtagatgtaaagattaaaacacaaacgaaattttc 473  Q
    ||||||| ||||| |||||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||||||    
T  4168709 tttaaagccaaatccgaactcggatcacgcaaaaacacaatgagaaggagtagatctaaagattaaaacacaaacgaaattttc 4168792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 180; E-Value: 6e-97
Query Start/End: Original strand, 101 - 473
Target Start/End: Original strand, 27764294 - 27764679
Alignment:
Q  101 caaccatcagatctactatacacgtgtaataattttaggcttctcaaaatacactaaatcaaacttcatttgcttcaaacatttctctcactaaaacata 200  Q
    ||||||||||||||| | |||||||||||||||  || |||||||||| ||||| ||||||||| | |||||||||||||||||||||||||||||||||    
T  27764294 caaccatcagatctagtgtacacgtgtaataatcctacgcttctcaaactacaccaaatcaaaccttatttgcttcaaacatttctctcactaaaacata 27764393  T
Q  201 aagctctccctctctcta----caattttcaacattctggaaaagaaaacgaagaa-----ctcgtgagtcttcatctcttccggccacacatgatgttt 291  Q
    ||| |||||||||||||     ||||||||||||||||| ||||||||||||||||     |   |||||||||||||||||||||||||||||||| ||    
T  27764394 aagttctccctctctctctctccaattttcaacattctgaaaaagaaaacgaagaagaattcagatgagtcttcatctcttccggccacacatgatgatt 27764493  T
Q  292 ccggcacggtggtcaccggccaaaggcggcggcactgctgtaccggagaaccaaactcacccttttttaaaa----acccatttttcaacatccattttc 387  Q
    ||| | |||| ||| ||||||| |||||||||||| || || | ||||||||||||||||||||||| ||||    | ||||||||||||||| |||||     
T  27764494 ccgacgcggtcgtcgccggccagaggcggcggcaccgccgtgctggagaaccaaactcaccctttttaaaaactaaagccatttttcaacatcaattttt 27764593  T
Q  388 gttttaaagtcaaattcgaactcggatcacgcaaaaacacaacgagaaagagtagatgtaaagattaaaacacaaacgaaattttc 473  Q
    ||||||||| |||||| ||||| ||||| ||||||||||||| |||||| ||||||  |||||||||||||||| |||||||||||    
T  27764594 gttttaaagccaaatttgaactgggatcgcgcaaaaacacaatgagaaatagtagacctaaagattaaaacacagacgaaattttc 27764679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 139 - 473
Target Start/End: Original strand, 18923351 - 18923690
Alignment:
Q  139 gcttctcaaaatacactaaatcaaacttcatttgcttcaaacatttctctcactaaaacataaagctctccctctctctacaattttcaacattctggaa 238  Q
    |||||||||| ||||| |||||||||||||||||||||||| |||||| ||||||||||||||| || ||||||||||||||||||||||||||||| ||    
T  18923351 gcttctcaaactacaccaaatcaaacttcatttgcttcaaatatttctgtcactaaaacataaaactatccctctctctacaattttcaacattctgaaa 18923450  T
Q  239 aagaaaacgaagaactc--gtgagtcttcatctcttccggccacacatgatgtttccggcacggtggtcaccggccaaaggcggcggcactgctgtaccg 336  Q
    |||||||||||||||||   ||||||||||||||||||| |||||||||||| ||||||| | |||||| || |  | ||||||| ||   || || |||    
T  18923451 aagaaaacgaagaactcagatgagtcttcatctcttccgaccacacatgatgattccggcgcagtggtcgccagaaagaggcggc-gcggcgccgtgccg 18923549  T
Q  337 gagaaccaaactcacccttttttaa----aaacccatttttcaacatccattttcgttttaaagtcaaattcgaactcggatcacgcaaaaacacaacga 432  Q
    ||||||||||||||||||||   ||    ||| ||||||||||||||||||||||||||||||  ||||| |||| ||||||| ||||||||||||||||    
T  18923550 gagaaccaaactcaccctttaaaaaaactaaagccatttttcaacatccattttcgttttaaatccaaatccgaagtcggatcgcgcaaaaacacaacga 18923649  T
Q  433 gaaagagtagatgtaaagattaaaacacaaacgaaattttc 473  Q
    ||| |||||||| |||| |||||||||||||||||||||||    
T  18923650 gaaggagtagatctaaatattaaaacacaaacgaaattttc 18923690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 98 - 473
Target Start/End: Original strand, 21097191 - 21097552
Alignment:
Q  98 tcacaaccatcagatctactatacacgtgtaataattttaggcttctcaaaatacactaaatcaaacttcatttgcttcaaacatttctctcactaaaac 197  Q
    |||||||||| ||||||| | |||||||||||||||| || |||| | ||| ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  21097191 tcacaaccattagatctagtttacacgtgtaataattctaagcttattaaattacaccaaatcaaacttcatttgcttcaaacatttctctcactaaaac 21097290  T
Q  198 ataaagctctcc--ctctctctacaattttcaacattctggaaaagaaaacgaagaactc--gtgagtcttcatctcttccggccacacatgatgtttcc 293  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||| ||||    
T  21097291 ataaagctctccctctctctctacaattttcaacattctggaaaagaaaacgaagaactcagatgagtcttcatctcttccggccacacatgatgattcc 21097390  T
Q  294 ggcacggtggtcaccggccaaaggcggcggcactgctgtaccggagaaccaaactcacccttttttaa----aaacccatttttcaacatccattttcgt 389  Q
    ||| ||||| || |||                 |||||     |||| ||||||||||||||||| ||    ||| ||||||||||||||||||||||||    
T  21097391 ggcgcggtgatcgccg-----------------tgctg-----gagagccaaactcaccctttttaaaaactaaagccatttttcaacatccattttcgt 21097468  T
Q  390 tttaaagtcaaattcgaactcggatcacgcaaaaacacaacgagaaagagtagatgtaaagattaaaacacaaacgaaattttc 473  Q
    ||||||| ||||| |||||| | |||  ||||||||||||| |||| ||||| || ||||||||||||||||||||||||||||    
T  21097469 tttaaagccaaatccgaacttgaatcgagcaaaaacacaacaagaaggagtatatctaaagattaaaacacaaacgaaattttc 21097552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 98 - 224
Target Start/End: Original strand, 637905 - 638031
Alignment:
Q  98 tcacaaccatcagatctactatacacgtgtaataattttaggcttctcaaaatacactaaatcaaacttcatttgcttcaaacatttctctcactaaaac 197  Q
    |||||||||||||||||| | |||| ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  637905 tcacaaccatcagatctagtgtacatgtgtaataattttaggcttctcaaactacaccaaatcaaacttcatttgcttcaaacatttctctcactaaaac 638004  T
Q  198 ataaagctctccctctctctacaattt 224  Q
    |||||||||||||||||||||||||||    
T  638005 ataaagctctccctctctctacaattt 638031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 257 - 458
Target Start/End: Original strand, 45256160 - 45256359
Alignment:
Q  257 tgagtcttcatctcttccggccacacatgatgtttccggcacggtggtcaccggccaaaggcggcggcactgctgtaccggagaaccaaactcacccttt 356  Q
    ||||||||||||||||||||||||||| |||| ||||||| |||||||| ||||||| |||||||| |      || ||||||||||||| ||| |||||    
T  45256160 tgagtcttcatctcttccggccacacaggatgattccggcgcggtggtcgccggccagaggcggcgcc------gtgccggagaaccaaattcatccttt 45256253  T
Q  357 tttaaaa----acccatttttcaacatccattttcgttttaaagtcaaattcgaactcggatcacgcaaaaacacaacgagaaagagtagatgtaaagat 452  Q
    || ||||    | ||||||||||||||||||||||||||||||| ||||| |||||||||||| ||||||||| ||||||||| |||||||| |||||||    
T  45256254 ttaaaaactaaagccatttttcaacatccattttcgttttaaagccaaatccgaactcggatcgcgcaaaaactcaacgagaaggagtagatctaaagat 45256353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 98 - 218
Target Start/End: Complemental strand, 26447426 - 26447306
Alignment:
Q  98 tcacaaccatcagatctactatacacgtgtaataattttaggcttctcaaaatacactaaatcaaacttcatttgcttcaaacatttctctcactaaaac 197  Q
    |||||||||||||||||| | |||||||||||||||| |||||||| |||| ||||| |||||||| |||||||||||||||||||||||||||||||||    
T  26447426 tcacaaccatcagatctagtgtacacgtgtaataattctaggcttcacaaattacaccaaatcaaatttcatttgcttcaaacatttctctcactaaaac 26447327  T
Q  198 ataaagctctccctctctcta 218  Q
    |||||| ||||||||||||||    
T  26447326 ataaagttctccctctctcta 26447306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 98 - 217
Target Start/End: Complemental strand, 51837105 - 51836985
Alignment:
Q  98 tcacaaccatcagatctactatacacgtgtaataattttaggcttctcaaaatacactaaatcaaacttca-tttgcttcaaacatttctctcactaaaa 196  Q
    ||||||||||||||| || | |||||||||||||||  ||||||||||||| ||||| ||||||||||||| ||| ||||||||||||||||||||||||    
T  51837105 tcacaaccatcagatttaatgtacacgtgtaataatcctaggcttctcaaactacaccaaatcaaacttcattttacttcaaacatttctctcactaaaa 51837006  T
Q  197 cataaagctctccctctctct 217  Q
    |||||||||||||||||||||    
T  51837005 cataaagctctccctctctct 51836985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 98 - 217
Target Start/End: Original strand, 45256026 - 45256145
Alignment:
Q  98 tcacaaccatcagatctactatacacgtgtaataattttaggcttctcaaaatacactaaatcaaacttcatttgcttcaaacatttctctcactaaaac 197  Q
    ||||||| ||||||| || | |||||||||||||||  ||||||| ||||| ||||  ||||||||||||||||||||||||||||||||||||||||||    
T  45256026 tcacaactatcagatatagtgtacacgtgtaataatcctaggcttttcaaactacatcaaatcaaacttcatttgcttcaaacatttctctcactaaaac 45256125  T
Q  198 ataaagctctccctctctct 217  Q
    ||||||||| ||| ||||||    
T  45256126 ataaagctccccccctctct 45256145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 257 - 395
Target Start/End: Complemental strand, 51836972 - 51836831
Alignment:
Q  257 tgagtcttcatctcttccggccacacatgatgtttccggcacggtggtcaccggccaaaggcggcggcactgctgtaccggagaaccaaactcacccttt 356  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||| ||| ||||||| || |  |  | |||||||||||||||||||||||    
T  51836972 tgagtcttcatctcttccggccacacatgatgattccggcacggtggtcgccgaccagaggcggcagcgc-accatgccggagaaccaaactcacccttt 51836874  T
Q  357 tttaa----aaacccatttttcaacatccattttcgttttaaa 395  Q
    || ||    ||| ||||||||| ||||||||||||||||||||    
T  51836873 ttaaaaattaaagccatttttccacatccattttcgttttaaa 51836831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 98 - 186
Target Start/End: Complemental strand, 36621715 - 36621627
Alignment:
Q  98 tcacaaccatcagatctactatacacgtgtaataattttaggcttctcaaaatacactaaatcaaacttcatttgcttcaaacatttct 186  Q
    |||||||||||||||||| | |||||||||||||||  || |||||| ||| ||||| |||||||||||||||||||||||||||||||    
T  36621715 tcacaaccatcagatctaatgtacacgtgtaataatcctatgcttcttaaactacaccaaatcaaacttcatttgcttcaaacatttct 36621627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 98 - 162
Target Start/End: Complemental strand, 50563743 - 50563679
Alignment:
Q  98 tcacaaccatcagatctactatacacgtgtaataattttaggcttctcaaaatacactaaatcaa 162  Q
    |||||||||||||||||| | |||||||||||||||| |||| |||||||| ||||| |||||||    
T  50563743 tcacaaccatcagatctagtgtacacgtgtaataattataggtttctcaaactacaccaaatcaa 50563679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 257 - 303
Target Start/End: Original strand, 638035 - 638081
Alignment:
Q  257 tgagtcttcatctcttccggccacacatgatgtttccggcacggtgg 303  Q
    ||||||||||||||||||||||||||| |||| ||||| ||||||||    
T  638035 tgagtcttcatctcttccggccacacacgatgattccgacacggtgg 638081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 257 - 303
Target Start/End: Complemental strand, 26447294 - 26447248
Alignment:
Q  257 tgagtcttcatctcttccggccacacatgatgtttccggcacggtgg 303  Q
    |||||| ||||||||||||||||||||||||| |||| || ||||||    
T  26447294 tgagtcctcatctcttccggccacacatgatgattccagcgcggtgg 26447248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 233; Significance: 1e-128; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 98 - 473
Target Start/End: Original strand, 39022026 - 39022409
Alignment:
Q  98 tcacaaccatcagatctactatacacgtgtaataattttaggcttctcaaaatacactaaatcaaacttcatttgcttcaaacatttctctcactaaaac 197  Q
    |||||| ||||||||||| | |||| ||||||||||  ||||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  39022026 tcacaatcatcagatctagtgtacatgtgtaataatcctaggcttctcaaactacaccaaatcaaacttcatttgcttcaaacatttatctcactaaaac 39022125  T
Q  198 ataaagctctcc--ctctctctacaattttcaacattctggaaaagaaaacgaagaact--cgtgagtcttcatctcttccggccacacatgatgtttcc 293  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||    |||||||||||||||||||||||||||||||| ||||    
T  39022126 ataaagctctccctctctctctacaattttcaacattctggaaaagaaaacgaagaacttagatgagtcttcatctcttccggccacacatgatgattcc 39022225  T
Q  294 ggcacggtggtcaccggccaaaggcggcggcactgctgtaccggagaaccaaactcacccttttttaa----aaacccatttttcaacatccattttcgt 389  Q
    | | ||||||||| |||||| ||||||||||   || || ||||||||||||||||||||||||| ||    |||  |||||||||||||||||||||||    
T  39022226 gacgcggtggtcatcggccagaggcggcggcgacgccgtgccggagaaccaaactcaccctttttaaaaactaaagtcatttttcaacatccattttcgt 39022325  T
Q  390 tttaaagtcaaattcgaactcggatcacgcaaaaacacaacgagaaagagtagatgtaaagattaaaacacaaacgaaattttc 473  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  39022326 tttaaagccaaatccgaactcggatcacgcaaaaacacaacgagaaagagtagatctaaagattaaaacacaaacaaaattttc 39022409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 98 - 473
Target Start/End: Complemental strand, 32987459 - 32987083
Alignment:
Q  98 tcacaaccatcagatctactatacacgtgtaataattttaggcttctcaaaatacactaaatcaaacttcatttgcttcaaacatttctctcactaaaac 197  Q
    |||||||||||||||||| | |||||||||||||||  ||||||||||||| ||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  32987459 tcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctcaaactacaccaaatcaaacttcatttgcttcaaacatttctctaactaaaac 32987360  T
Q  198 ataaagctctccctctctctacaattttcaacattctggaaaagaaaacgaagaactc--gtgagtcttcatctcttccggccacacatgatgtttccgg 295  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||| |||||||||||||||||| ||||||    
T  32987359 ataaagctctccctctctctacaattttcaacattctggaaaagaaaacgaagaactcatatgagtcttcatct-ttccggccacacatgatgattccgg 32987261  T
Q  296 cacggtggtcaccggccaaaggcggcggcactgctgtaccggagaaccaaactcacccttttttaa----aaacccatttttcaacatccattttcgttt 391  Q
    | | |||||| ||| ||| || ||| | |   || || ||||||||||||||||||||||||| ||    |||  |||||||||||||||||||||||||    
T  32987260 cgcagtggtcgccgcccagagacggggac---gccgtgccggagaaccaaactcaccctttttaaaaattaaagtcatttttcaacatccattttcgttt 32987164  T
Q  392 taaagtcaaattcgaactcggatcacgcaaaaacacaacgagaaagagtagatgtaaagattaaaacacaaacgaaattttc 473  Q
    ||||||||||| |||||  ||||| ||||||||||||||||||| ||||| || ||||||||||||||||||||||||||||    
T  32987163 taaagtcaaatccgaac-aggatcgcgcaaaaacacaacgagaaggagtatatctaaagattaaaacacaaacgaaattttc 32987083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 98 - 474
Target Start/End: Complemental strand, 15260865 - 15260479
Alignment:
Q  98 tcacaaccatcagatctactatacacgtgtaataattttaggcttctcaaaatacactaaatcaaacttcatttgcttcaaacatttctctcactaaaac 197  Q
    |||||||||||| ||||| | ||||||| |||||||   |||||||||||| ||||| |||||||||||||||||||||||| ||||||||||||||||     
T  15260865 tcacaaccatcaaatctagtgtacacgtttaataatccaaggcttctcaaactacaccaaatcaaacttcatttgcttcaaatatttctctcactaaaat 15260766  T
Q  198 ataaagctctccctct--ctctacaattttcaacattctggaaaagaaaacgaagaactc--gtgagtcttcatctcttccggccacacatgatgtttc- 292  Q
    ||||| ||||||||||  ||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||| |||||| |||     
T  15260765 ataaaactctccctctctctctacaattttcaacattctggaaaagaaaacgaagaactcagatgagtcttcatctcttccggccacatatgatgattct 15260666  T
Q  293 -cggcacggtggtcaccggccaaaggcggcggcactgctgtaccggagaaccaaactcacccttttttaa----aaacccatttttcaacatccattttc 387  Q
       || |||||||  | ||||| ||||||||||   || || ||||||||||||||||||||||||| ||    ||| ||||||| ||||||||||||||    
T  15260665 aacgcgcggtggttgctggccagaggcggcggcggcgccgtgccggagaaccaaactcaccctttttaaaaactaaagccattttccaacatccattttc 15260566  T
Q  388 gttttaaagtcaaattcgaactcggatcacgcaaaaacacaacgagaaagagtagatgtaaagattaaaacacaaacgaaattttca 474  Q
    ||||||||| ||||| ||||||||||||  ||||||| |||||||||| |||||||| ||||||||||||||||||| |||||||||    
T  15260565 gttttaaagccaaatccgaactcggatcgtgcaaaaatacaacgagaaggagtagatctaaagattaaaacacaaacaaaattttca 15260479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 98 - 223
Target Start/End: Original strand, 8550555 - 8550682
Alignment:
Q  98 tcacaaccatcagatctactatacacgtgtaataattttaggcttctcaaaatacactaaatcaaacttcatttgcttcaaacatttctctcactaaaac 197  Q
    |||||||||||||||||| | |||||||||||||||  || |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  8550555 tcacaaccatcagatctagtgtacacgtgtaataatcataagcttctcaaattacaccaaatcaaacttcatttgcttcaaacatttctctcactaaaac 8550654  T
Q  198 ataaagctctccctc--tctctacaatt 223  Q
    |||||| ||||||||  |||||||||||    
T  8550655 ataaagttctccctctttctctacaatt 8550682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 98 - 217
Target Start/End: Complemental strand, 4836715 - 4836596
Alignment:
Q  98 tcacaaccatcagatctactatacacgtgtaataattttaggcttctcaaaatacactaaatcaaacttcatttgcttcaaacatttctctcactaaaac 197  Q
    |||||||||||||||||| | |||||||||||||||  || |||| ||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  4836715 tcacaaccatcagatctagtgtacacgtgtaataatcctaagcttttcaaactacaccaaatcaaacttcatttgcttcaaacatttatctcactaaaac 4836616  T
Q  198 ataaagctctccctctctct 217  Q
    ||||||||||||||||||||    
T  4836615 ataaagctctccctctctct 4836596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 98 - 217
Target Start/End: Complemental strand, 4842160 - 4842041
Alignment:
Q  98 tcacaaccatcagatctactatacacgtgtaataattttaggcttctcaaaatacactaaatcaaacttcatttgcttcaaacatttctctcactaaaac 197  Q
    |||||||||||||||||| | |||||||||||||||  || |||| ||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  4842160 tcacaaccatcagatctagtgtacacgtgtaataatcctaagcttttcaaactacaccaaatcaaacttcatttgcttcaaacatttatctcactaaaac 4842061  T
Q  198 ataaagctctccctctctct 217  Q
    ||||||||||||||||||||    
T  4842060 ataaagctctccctctctct 4842041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 98 - 217
Target Start/End: Original strand, 7058165 - 7058284
Alignment:
Q  98 tcacaaccatcagatctactatacacgtgtaataattttaggcttctcaaaatacactaaatcaaacttcatttgcttcaaacatttctctcactaaaac 197  Q
    ||||||||||| |||||| | |||||||||||||||  ||| ||||||||| ||||| |||||||||||||||||||||||||| |||||||||||||||    
T  7058165 tcacaaccatccgatctagtgtacacgtgtaataatcctagacttctcaaactacaccaaatcaaacttcatttgcttcaaacacttctctcactaaaac 7058264  T
Q  198 ataaagctctccctctctct 217  Q
    ||||||||||||||||||||    
T  7058265 ataaagctctccctctctct 7058284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 98 - 186
Target Start/End: Original strand, 7614119 - 7614207
Alignment:
Q  98 tcacaaccatcagatctactatacacgtgtaataattttaggcttctcaaaatacactaaatcaaacttcatttgcttcaaacatttct 186  Q
    |||||||||||||||||| | |||||||||||||||  ||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  7614119 tcacaaccatcagatctaatgtacacgtgtaataatcataggcttctcaaactacaccaaatcaaacttcatttgcttcaaacatttct 7614207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 123 - 217
Target Start/End: Original strand, 2750101 - 2750195
Alignment:
Q  123 cgtgtaataattttaggcttctcaaaatacactaaatcaaacttcatttgcttcaaacatttctctcactaaaacataaagctctccctctctct 217  Q
    |||||||||||  ||| ||||||||| ||||| |||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||| ||||    
T  2750101 cgtgtaataatcatagacttctcaaactacaccaaatcaaacttcatttactttaaacatttctctcactaaaacataatgctctccctcactct 2750195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 175 - 223
Target Start/End: Original strand, 1208829 - 1208877
Alignment:
Q  175 tcaaacatttctctcactaaaacataaagctctccctctctctacaatt 223  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  1208829 tcaaacatttctctcactaaaacataaagctctccctctctctacaatt 1208877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 257 - 300
Target Start/End: Complemental strand, 39658425 - 39658382
Alignment:
Q  257 tgagtcttcatctcttccggccacacatgatgtttccggcacgg 300  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  39658425 tgagtcttcatctcttccggccacacatgatgattccggcacgg 39658382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 98 - 162
Target Start/End: Original strand, 15181842 - 15181906
Alignment:
Q  98 tcacaaccatcagatctactatacacgtgtaataattttaggcttctcaaaatacactaaatcaa 162  Q
    |||||| ||||||||||| | ||||||||||||||| ||||| |||||||| ||||| |||||||    
T  15181842 tcacaagcatcagatctagtgtacacgtgtaataatcttaggtttctcaaactacaccaaatcaa 15181906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 257 - 296
Target Start/End: Complemental strand, 4836583 - 4836544
Alignment:
Q  257 tgagtcttcatctcttccggccacacatgatgtttccggc 296  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  4836583 tgagtcttcatctcttccggccacacatgatgattccggc 4836544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 257 - 296
Target Start/End: Complemental strand, 4842028 - 4841989
Alignment:
Q  257 tgagtcttcatctcttccggccacacatgatgtttccggc 296  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  4842028 tgagtcttcatctcttccggccacacatgatgattccggc 4841989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 190 - 223
Target Start/End: Complemental strand, 39658463 - 39658430
Alignment:
Q  190 actaaaacataaagctctccctctctctacaatt 223  Q
    ||||||||||||||||||||||||||||||||||    
T  39658463 actaaaacataaagctctccctctctctacaatt 39658430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 257 - 300
Target Start/End: Original strand, 1208882 - 1208925
Alignment:
Q  257 tgagtcttcatctcttccggccacacatgatgtttccggcacgg 300  Q
    |||||||||||||||| ||||||||||||||| |||| ||||||    
T  1208882 tgagtcttcatctcttgcggccacacatgatgattccagcacgg 1208925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 257 - 304
Target Start/End: Original strand, 8550687 - 8550734
Alignment:
Q  257 tgagtcttcatctcttccggccacacatgatgtttccggcacggtggt 304  Q
    |||||||||||||||| ||||||||||||||| ||| ||| |||||||    
T  8550687 tgagtcttcatctcttacggccacacatgatgattctggcgcggtggt 8550734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 98 - 473
Target Start/End: Original strand, 27658 - 28035
Alignment:
Q  98 tcacaaccatcagatctactatacacgtgtaataattttaggcttctcaaaatacactaaatcaaacttcatttgcttcaaacatttctctcactaaaac 197  Q
    ||||||| || ||||||| | |||||||||||||||| ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  27658 tcacaactataagatctagtgtacacgtgtaataattctaggcttctcaaactacaccaaatcaaacttcatttgcttcaaacatttctctcactaaaac 27757  T
Q  198 ataaagctctccctc--tctctacaattttcaacattctggaaaagaaaacgaagaactc--gtgagtcttcatctcttccggccacacatgatgtttcc 293  Q
    ||||| |||||||||  |||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||| ||||    
T  27758 ataaatctctccctctttctctacaattttcaacattctggaaaagaaaacgaagaactcagatgagtcttcatctcttccggccacacatgatgattcc 27857  T
Q  294 ggcacggtggtcaccggccaaaggcggcggcactgctgtaccggagaaccaaactcacccttttttaa----aaacccatttttcaacatccattttcgt 389  Q
    ||| |||||||| || |||| |||| ||||      ||| ||||||||||||||||||||||||| ||    ||| ||||||||||||||||||||||||    
T  27858 ggcgcggtggtcgccagccagaggcagcgg------tgtgccggagaaccaaactcaccctttttaaaaactaaagccatttttcaacatccattttcgt 27951  T
Q  390 tttaaagtcaaattcgaactcggatcacgcaaaaacacaacgagaaagagtagatgtaaagattaaaacacaaacgaaattttc 473  Q
    ||||||| ||||| | |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  27952 tttaaagccaaatccaaactcggatcacgcaaaaacacaacgagaaggagtagatctaaagattaaaacacaaacgaaattttc 28035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 216; Significance: 1e-118; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 98 - 473
Target Start/End: Original strand, 13664 - 14041
Alignment:
Q  98 tcacaaccatcagatctactatacacgtgtaataattttaggcttctcaaaatacactaaatcaaacttcatttgcttcaaacatttctctcactaaaac 197  Q
    |||||||||||||||||| | ||||| |||||||||  || |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  13664 tcacaaccatcagatctagtgtacacatgtaataatcctacgcttctcaaactacaccaaatcaaacttcatttgcttcaaacatttctctcactaaaac 13763  T
Q  198 ataaagctctccctctctctacaattttcaacattctggaaaagaaaacgaagaactc--gtgagtcttcatctcttccggccacacatgatgtttccgg 295  Q
    |||||| |||||||||||||||||||||||||  ||||||||||||||||||||||||   |||||||||||||||||||| ||||||||||| ||||||    
T  13764 ataaagttctccctctctctacaattttcaactctctggaaaagaaaacgaagaactcagatgagtcttcatctcttccggtcacacatgatgattccgg 13863  T
Q  296 cacggtggtcaccggccaaaggcggcggcactgctgtaccggagaaccaaactcacccttttttaa----aaacccatttttcaacatccattttcgttt 391  Q
      || ||||| ||||||| |||||| |||   |  || ||||||||||||||||||||||||| ||    ||| |||||||||||||||||||||| |||    
T  13864 tgcgatggtcgccggccagaggcggtggc---gtcgtgccggagaaccaaactcaccctttttaaaaactaaagccatttttcaacatccattttccttt 13960  T
Q  392 taaagtcaaattcgaactcggatcacgcaaaaacacaacgagaaagagtagatgtaaagattaaaacacaaacgaaattttc 473  Q
    ||||| |||||||||||||||||| ||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||    
T  13961 taaagccaaattcgaactcggatcgcgcaaaaacacaacgag-aagagtagatctaaagattaaaacacaaacgaaattttc 14041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 216; Significance: 1e-118; HSPs: 9)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 98 - 473
Target Start/End: Original strand, 20709825 - 20710202
Alignment:
Q  98 tcacaaccatcagatctactatacacgtgtaataattttaggcttctcaaaatacactaaatcaaacttcatttgcttcaaacatttctctcactaaaac 197  Q
    |||||||||||||||||| | ||||| |||||||||  || |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  20709825 tcacaaccatcagatctagtgtacacatgtaataatcctacgcttctcaaactacaccaaatcaaacttcatttgcttcaaacatttctctcactaaaac 20709924  T
Q  198 ataaagctctccctctctctacaattttcaacattctggaaaagaaaacgaagaactc--gtgagtcttcatctcttccggccacacatgatgtttccgg 295  Q
    |||||| |||||||||||||||||||||||||  ||||||||||||||||||||||||   |||||||||||||||||||| ||||||||||| ||||||    
T  20709925 ataaagttctccctctctctacaattttcaactctctggaaaagaaaacgaagaactcagatgagtcttcatctcttccggtcacacatgatgattccgg 20710024  T
Q  296 cacggtggtcaccggccaaaggcggcggcactgctgtaccggagaaccaaactcacccttttttaa----aaacccatttttcaacatccattttcgttt 391  Q
      || ||||| ||||||| |||||| |||   |  || ||||||||||||||||||||||||| ||    ||| |||||||||||||||||||||| |||    
T  20710025 tgcgatggtcgccggccagaggcggtggc---gtcgtgccggagaaccaaactcaccctttttaaaaactaaagccatttttcaacatccattttccttt 20710121  T
Q  392 taaagtcaaattcgaactcggatcacgcaaaaacacaacgagaaagagtagatgtaaagattaaaacacaaacgaaattttc 473  Q
    ||||| |||||||||||||||||| ||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||    
T  20710122 taaagccaaattcgaactcggatcgcgcaaaaacacaacgag-aagagtagatctaaagattaaaacacaaacgaaattttc 20710202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 257 - 458
Target Start/End: Complemental strand, 18297993 - 18297788
Alignment:
Q  257 tgagtcttcatctcttccggccacacatgatgtttccggcacggtggtcaccggccaaaggcggcggcactgctgtaccggagaaccaaactcacccttt 356  Q
    ||||||||||||||||||| |||||||||||| ||||||| |||||||| ||||||||||||||||||   || || | |||||||||||||||||||||    
T  18297993 tgagtcttcatctcttccgaccacacatgatgattccggcgcggtggtcgccggccaaaggcggcggcggcgccgtgctggagaaccaaactcacccttt 18297894  T
Q  357 tttaaaaac----ccatttttcaacatccattttcgttttaaagtcaaattcgaactcggatcacgcaaaaacacaacgagaaagagtagatgtaaagat 452  Q
    || |||||     ||||||||||||||||||||||||||||||| ||||| | ||||||| || ||||||||||||||||||| |||||||| |||||||    
T  18297893 ttaaaaaataaagccatttttcaacatccattttcgttttaaagccaaatccaaactcgggtcgcgcaaaaacacaacgagaaggagtagatctaaagat 18297794  T
Q  453 taaaac 458  Q
    ||||||    
T  18297793 taaaac 18297788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 98 - 217
Target Start/End: Original strand, 25192943 - 25193062
Alignment:
Q  98 tcacaaccatcagatctactatacacgtgtaataattttaggcttctcaaaatacactaaatcaaacttcatttgcttcaaacatttctctcactaaaac 197  Q
    |||||||||| ||||||| | |||||||||||||||| ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  25192943 tcacaaccattagatctagtgtacacgtgtaataattctaggcttctcaaattacaccaaatcaaacttcatttgcttcaaacatttctctcactaaaac 25193042  T
Q  198 ataaagctctccctctctct 217  Q
    ||||||||||||||||||||    
T  25193043 ataaagctctccctctctct 25193062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 98 - 217
Target Start/End: Complemental strand, 18298125 - 18298006
Alignment:
Q  98 tcacaaccatcagatctactatacacgtgtaataattttaggcttctcaaaatacactaaatcaaacttcatttgcttcaaacatttctctcactaaaac 197  Q
    |||||||||||||||||| | |||||||||||||||  ||||||||||||| ||||| ||||||||||||||||||||||| | ||||||||||||||||    
T  18298125 tcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctcaaactacaccaaatcaaacttcatttgcttcaagcgtttctctcactaaaac 18298026  T
Q  198 ataaagctctccctctctct 217  Q
    ||||| ||||||||||||||    
T  18298025 ataaatctctccctctctct 18298006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 175 - 217
Target Start/End: Complemental strand, 4579763 - 4579721
Alignment:
Q  175 tcaaacatttctctcactaaaacataaagctctccctctctct 217  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  4579763 tcaaacatttctctcactaaaacataaagctctccctctctct 4579721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 257 - 299
Target Start/End: Complemental strand, 4579708 - 4579666
Alignment:
Q  257 tgagtcttcatctcttccggccacacatgatgtttccggcacg 299  Q
    |||||||||||||||||||||||||||||||| ||||||||||    
T  4579708 tgagtcttcatctcttccggccacacatgatgattccggcacg 4579666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 98 - 162
Target Start/End: Complemental strand, 4281802 - 4281738
Alignment:
Q  98 tcacaaccatcagatctactatacacgtgtaataattttaggcttctcaaaatacactaaatcaa 162  Q
    |||||||||||||||||| | |||||||||||||||  |||| |||||||| ||||  |||||||    
T  4281802 tcacaaccatcagatctagtgtacacgtgtaataatcctaggtttctcaaactacagcaaatcaa 4281738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 98 - 162
Target Start/End: Original strand, 25995338 - 25995402
Alignment:
Q  98 tcacaaccatcagatctactatacacgtgtaataattttaggcttctcaaaatacactaaatcaa 162  Q
    ||||||||||||||| || | |||||||||||||||  |||||| |||||| ||||| |||||||    
T  25995338 tcacaaccatcagatttagtgtacacgtgtaataatcctaggctactcaaattacaccaaatcaa 25995402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 258 - 288
Target Start/End: Original strand, 25193076 - 25193106
Alignment:
Q  258 gagtcttcatctcttccggccacacatgatg 288  Q
    |||||||||||||||||||||||||||||||    
T  25193076 gagtcttcatctcttccggccacacatgatg 25193106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 216; Significance: 1e-118; HSPs: 11)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 98 - 472
Target Start/End: Complemental strand, 23320099 - 23319717
Alignment:
Q  98 tcacaaccatcagatctactatacacgtgtaataattttaggcttctcaaaatacactaaatcaaacttcatttgcttcaaacatttctctcactaaaac 197  Q
    |||||||||||||||||| | |||||||||||||||  ||| ||||||||| ||||| |||||||||||||||||||| |||||||||||||||||||||    
T  23320099 tcacaaccatcagatctagtgtacacgtgtaataatcctagacttctcaaactacaccaaatcaaacttcatttgctttaaacatttctctcactaaaac 23320000  T
Q  198 ataaagctctccctc--tctctacaattttcaacattctggaaaagaaaacgaagaactc--gtgagtcttcatctcttccggccacacatgatgtttcc 293  Q
    |||||||| ||||||  ||||||| |||||||| ||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||| ||||    
T  23319999 ataaagctatccctctttctctactattttcaaaattctggaaaagaaaacgaagaactcagatgagtcttcatctcttccggccacacatgatgattcc 23319900  T
Q  294 ggcacggtggtcaccggccaaaggcggcggcactgctgtaccggagaaccaaactcacccttttttaa----aaacccatttttcaacatccattttcgt 389  Q
    ||| |||||||| ||||||| ||||||||||   || || | ||||||||||||||||| ||||| ||    ||| ||||||||||||||||||||||||    
T  23319899 ggcgcggtggtcgccggccagaggcggcggcgacgccgtgctggagaaccaaactcaccatttttaaaaactaaagccatttttcaacatccattttcgt 23319800  T
Q  390 tttaaagtcaaattcgaactcggatcacgcaaaaacacaacgagaaagagtagatgtaaagattaaaacacaaacgaaatttt 472  Q
    ||||||| ||||| | |||||||||||||||||||||||||||||| |||||||| |||||||||||| ||||||||| ||||    
T  23319799 tttaaagccaaatccaaactcggatcacgcaaaaacacaacgagaatgagtagatctaaagattaaaatacaaacgaattttt 23319717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 100 - 473
Target Start/End: Original strand, 45889649 - 45890033
Alignment:
Q  100 acaaccatcagatctactatacacgtgtaataattttaggcttctcaaaatacactaaatcaaacttcatttgcttcaaacatttctctcactaaaacat 199  Q
    |||||||||||||||| |||||| |||||||||| |||||||||||||| ||||| |||||||| ||||||| |||||||||||||||||||||||||||    
T  45889649 acaaccatcagatctagtatacatgtgtaataatcttaggcttctcaaactacaccaaatcaaatttcatttccttcaaacatttctctcactaaaacat 45889748  T
Q  200 aaagctctcc--ctctctctacaattttcaacattctggaaaagaaaacgaagaactc--gtgagtcttcatctcttccggccacacatgatgtttccgg 295  Q
    |||| |||||  ||||||||||||||||||| |||||| |||||||||||||||||||   ||||||||||||||||||||||||| |||||| || |||    
T  45889749 aaagttctccctctctctctacaattttcaatattctgaaaaagaaaacgaagaactcagatgagtcttcatctcttccggccacaaatgatgatttcgg 45889848  T
Q  296 cacggtggtcaccggccaaaggcggcggcactgctgtaccggagaaccaaactcaccctt--ttttaa-----aaacccatttttcaacatccattttcg 388  Q
    | |||||||| ||||||| ||||||| ||   || ||  ||||||||||||||| |||||  ||||||     ||| |||||||||||||||| ||||||    
T  45889849 cgcggtggtcgccggccagaggcggcagcggcgccgtctcggagaaccaaactcgccctttattttaaaaagtaaagccatttttcaacatccgttttcg 45889948  T
Q  389 ttttaaagtcaaattcgaactcggatcacgcaaaaacacaacgagaaagagtagatgtaaagattaaaacacaaacgaaattttc 473  Q
    |||||||| ||||| ||||||| |||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  45889949 ttttaaagccaaatccgaactcagatcgcgcaaaaacacaacgagaatgagtagatctaaagattaaaacacaaacgaaattttc 45890033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 98 - 473
Target Start/End: Original strand, 18056835 - 18057236
Alignment:
Q  98 tcacaaccatcagatctactatacacgtgtaataattttaggcttctcaaaatacactaaatcaaacttcatttgcttcaaacatttctctcactaaaac 197  Q
    |||||||||||||||||| | |||||||||||||||  ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  18056835 tcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctcaaactacaccaaatcaaacttcatttgcttcaaacatttctctcactaaaac 18056934  T
Q  198 ataaagctctccctctctctacaattttcaacattctggaaaagaaaacgaagaactc--gtgagtcttcatctcttccggccacacatgatgtttccgg 295  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||| ||||||||||||||||||||||| |||| |    
T  18056935 ataaaactctccctctctctacaattttcaacattctggaaaagaaaacgaagaactcagatgagtctttatctcttccggccacacatgatgattccag 18057034  T
Q  296 c--------------------acggtggtcaccggccaaaggcggcggcactgctgtaccggagaaccaaactcacccttttttaa----aaacccattt 371  Q
    |                     |||||||| ||||||||||||||||||   || || ||||| |||||||||||||||| || ||    |||  |||||    
T  18057035 cgcggtggtcgccgaccagaggcggtggtcgccggccaaaggcggcggcggcgccgtgccggaaaaccaaactcacccttcttaaaaactaaattcattt 18057134  T
Q  372 ttcaacatccattttcgttttaaagtcaaattcgaactcggatcacgcaaaaacacaacgagaaagagtagatgtaaagattaaaacacaaacgaaattt 471  Q
    |||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  18057135 ttcaacatccattttcgttttaaagtcaaattcgaactcggattgtgcaaaaacacaacgagaatgagtagatctaaagattaaaacacaaacgaaattt 18057234  T
Q  472 tc 473  Q
    ||    
T  18057235 tc 18057236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 98 - 217
Target Start/End: Original strand, 22348090 - 22348209
Alignment:
Q  98 tcacaaccatcagatctactatacacgtgtaataattttaggcttctcaaaatacactaaatcaaacttcatttgcttcaaacatttctctcactaaaac 197  Q
    |||||||||||| ||||| | |||||||||||||||  ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  22348090 tcacaaccatcatatctagtgtacacgtgtaataatcctaggcttctcaaactacaccaaatcaaacttcatttgcttcaaacatttctctcactaaaac 22348189  T
Q  198 ataaagctctccctctctct 217  Q
    ||||||||||||||||||||    
T  22348190 ataaagctctccctctctct 22348209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 98 - 217
Target Start/End: Original strand, 179659 - 179778
Alignment:
Q  98 tcacaaccatcagatctactatacacgtgtaataattttaggcttctcaaaatacactaaatcaaacttcatttgcttcaaacatttctctcactaaaac 197  Q
    |||||||||||||||||| | |||||||||||||||   | |||||||||| ||||| |||||||||||||||||||| |||||||||||||||||||||    
T  179659 tcacaaccatcagatctagtgtacacgtgtaataatcccaagcttctcaaactacaccaaatcaaacttcatttgcttaaaacatttctctcactaaaac 179758  T
Q  198 ataaagctctccctctctct 217  Q
    ||||||||||||||||||||    
T  179759 ataaagctctccctctctct 179778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 102 - 217
Target Start/End: Complemental strand, 8402321 - 8402206
Alignment:
Q  102 aaccatcagatctactatacacgtgtaataattttaggcttctcaaaatacactaaatcaaacttcatttgcttcaaacatttctctcactaaaacataa 201  Q
    |||||||||||||| | ||||| |||||||||  |||| |||||||| || || |||||||||||||| |||||||||||||||||||||||||||||||    
T  8402321 aaccatcagatctagtgtacacatgtaataatcctaggtttctcaaactaaaccaaatcaaacttcatctgcttcaaacatttctctcactaaaacataa 8402222  T
Q  202 agctctccctctctct 217  Q
    ||||||| ||||||||    
T  8402221 agctctctctctctct 8402206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 98 - 186
Target Start/End: Original strand, 30802447 - 30802535
Alignment:
Q  98 tcacaaccatcagatctactatacacgtgtaataattttaggcttctcaaaatacactaaatcaaacttcatttgcttcaaacatttct 186  Q
    |||||||||||||||||| | ||||||||||||||| |||||||||||||| ||||| |||||||||||||||||||||||| ||||||    
T  30802447 tcacaaccatcagatctagtgtacacgtgtaataatcttaggcttctcaaactacaccaaatcaaacttcatttgcttcaaatatttct 30802535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 98 - 162
Target Start/End: Original strand, 37639393 - 37639457
Alignment:
Q  98 tcacaaccatcagatctactatacacgtgtaataattttaggcttctcaaaatacactaaatcaa 162  Q
    |||||||||||||||||| | |||||||||||||||| ||| ||||||||| ||||| |||||||    
T  37639393 tcacaaccatcagatctagtgtacacgtgtaataattatagacttctcaaactacaccaaatcaa 37639457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 257 - 293
Target Start/End: Original strand, 22348222 - 22348258
Alignment:
Q  257 tgagtcttcatctcttccggccacacatgatgtttcc 293  Q
    |||||||||||||||||||||||||||||||| ||||    
T  22348222 tgagtcttcatctcttccggccacacatgatgattcc 22348258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 257 - 303
Target Start/End: Complemental strand, 8402191 - 8402145
Alignment:
Q  257 tgagtcttcatctcttccggccacacatgatgtttccggcacggtgg 303  Q
    ||||||||||||| ||||||||| |||||||| ||||||| ||||||    
T  8402191 tgagtcttcatcttttccggccaaacatgatgattccggcgcggtgg 8402145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 98 - 162
Target Start/End: Complemental strand, 35198195 - 35198131
Alignment:
Q  98 tcacaaccatcagatctactatacacgtgtaataattttaggcttctcaaaatacactaaatcaa 162  Q
    ||||| |||||||||||| | |||||||||||||||  ||| ||| ||||| ||||| |||||||    
T  35198195 tcacagccatcagatctagtgtacacgtgtaataatcctagacttttcaaactacacaaaatcaa 35198131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 213; Significance: 1e-116; HSPs: 18)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 98 - 473
Target Start/End: Original strand, 8718152 - 8718543
Alignment:
Q  98 tcacaaccatcagatctactatacacgtgtaataattttaggcttctcaaaatacactaaatcaaacttcatttgcttcaaacatttctctcactaaaac 197  Q
    |||||||||||||||||| | |||| ||||||||||  ||||||||| ||| ||||| ||||||||||||||||| || |||||||||||||||||||||    
T  8718152 tcacaaccatcagatctagtgtacatgtgtaataatcctaggcttcttaaactacaccaaatcaaacttcatttgtttaaaacatttctctcactaaaac 8718251  T
Q  198 ataaagctctccctctctct----------acaattttcaacattctggaaaagaaaacgaagaactcg--tgagtcttcatctcttccggccacacatg 285  Q
    |||||||| |||||||||||          ||||||||||||||||||||||||||||||||||| ||   |||||||||||||||||||||||||||||    
T  8718252 ataaagctttccctctctctctctctctctacaattttcaacattctggaaaagaaaacgaagaaatcagatgagtcttcatctcttccggccacacatg 8718351  T
Q  286 atgtttccggcacggtggtcaccggccaaaggcggcggcactgctgtaccggagaaccaaactcacccttttttaaaa----acccatttttcaacatcc 381  Q
    ||| ||||||| |||||||||||||||| ||||||||||    | || ||||||||||||||||||||||||| ||||    | |||||||||||||| |    
T  8718352 atgattccggcgcggtggtcaccggccagaggcggcggcggcaccgtgccggagaaccaaactcaccctttttaaaaactaaagccatttttcaacattc 8718451  T
Q  382 attttcgttttaaagtcaaattcgaactcggatcacgcaaaaacacaacgagaaagagtagatgtaaagattaaaacacaaacgaaattttc 473  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  8718452 attttcgttttaaagccaaattcgaactcggatcgcgcaaaaacacaacgagaaggagtagatctaaagattaaaacacaaacgaaattttc 8718543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 98 - 473
Target Start/End: Original strand, 9070039 - 9070430
Alignment:
Q  98 tcacaaccatcagatctactatacacgtgtaataattttaggcttctcaaaatacactaaatcaaacttcatttgcttcaaacatttctctcactaaaac 197  Q
    |||||||||||||||||| | |||| ||||||||||  ||||||||| ||| ||||| ||||||||||||||||| || |||||||||||||||||||||    
T  9070039 tcacaaccatcagatctagtgtacatgtgtaataatcctaggcttcttaaactacaccaaatcaaacttcatttgtttaaaacatttctctcactaaaac 9070138  T
Q  198 ataaagctctccctctctct----------acaattttcaacattctggaaaagaaaacgaagaactcg--tgagtcttcatctcttccggccacacatg 285  Q
    |||||||| |||||||||||          ||||||||||||||||||||||||||||||||||| ||   |||||||||||||||||||||||||||||    
T  9070139 ataaagctttccctctctctctctctctctacaattttcaacattctggaaaagaaaacgaagaaatcagatgagtcttcatctcttccggccacacatg 9070238  T
Q  286 atgtttccggcacggtggtcaccggccaaaggcggcggcactgctgtaccggagaaccaaactcacccttttttaaaa----acccatttttcaacatcc 381  Q
    ||| ||||||| |||||||||||||||| ||||||||||    | || ||||||||||||||||||||||||| ||||    | |||||||||||||| |    
T  9070239 atgattccggcgcggtggtcaccggccagaggcggcggcggcaccgtgccggagaaccaaactcaccctttttaaaaactaaagccatttttcaacattc 9070338  T
Q  382 attttcgttttaaagtcaaattcgaactcggatcacgcaaaaacacaacgagaaagagtagatgtaaagattaaaacacaaacgaaattttc 473  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  9070339 attttcgttttaaagccaaattcgaactcggatcgcgcaaaaacacaacgagaaggagtagatctaaagattaaaacacaaacgaaattttc 9070430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 257 - 458
Target Start/End: Complemental strand, 7045183 - 7044978
Alignment:
Q  257 tgagtcttcatctcttccggccacacatgatgtttccggcacggtggtcaccggccaaaggcggcggcactgctgtaccggagaaccaaactcacccttt 356  Q
    |||||||||||||||||| ||||||||||||| ||||| | |||||||| || |||| |||| |||||   ||||| |||||||||||||||||||||||    
T  7045183 tgagtcttcatctcttccagccacacatgatgattccgacgcggtggtcgcctgccagaggcagcggcggcgctgtgccggagaaccaaactcacccttt 7045084  T
Q  357 tttaaaa----acccatttttcaacatccattttcgttttaaagtcaaattcgaactcggatcacgcaaaaacacaacgagaaagagtagatgtaaagat 452  Q
    || ||||    | ||||||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||||||||||| |||||||| |||||||    
T  7045083 ttaaaaactaaagccatttttcaacatccattttcgttttaaagccaaatctgaactcggatcacgcaaaaacacaacgagaaggagtagatctaaagat 7044984  T
Q  453 taaaac 458  Q
    ||||||    
T  7044983 taaaac 7044978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 257 - 457
Target Start/End: Complemental strand, 51362321 - 51362120
Alignment:
Q  257 tgagtcttcatctcttccggccacacatgatgtttccggcacggtggtcaccggccaaaggcggcggcactgctgtaccggagaaccaaactcacccttt 356  Q
    |||||||||||||||||||||||||||||||| ||| | | ||||||||  |||||| |||||||| |   || || |||||||||||||||||||||||    
T  51362321 tgagtcttcatctcttccggccacacatgatgattctgacgcggtggtcgtcggccagaggcggcgcc---gccgtgccggagaaccaaactcacccttt 51362225  T
Q  357 tttaaaa----acccatttttcaacatccattttcgttttaaagtcaaattcgaactcggatcacgcaaaaacacaacgagaaagagtagatgtaaagat 452  Q
    || ||||    | ||||||||||||||||||||||||||| ||| ||||| |||||||||||| ||||||||||||||||||| |||||||| |||||||    
T  51362224 ttaaaaattaaagccatttttcaacatccattttcgttttcaagccaaatccgaactcggatcgcgcaaaaacacaacgagaaggagtagatctaaagat 51362125  T
Q  453 taaaa 457  Q
    |||||    
T  51362124 taaaa 51362120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 98 - 255
Target Start/End: Original strand, 39099248 - 39099409
Alignment:
Q  98 tcacaaccatcagatctactatacacgtgtaataattttaggcttctcaaaatacactaaatcaaacttcatttgcttcaaacatttctctcactaaaac 197  Q
    |||||||||||||||||| | |||||||||||||||  ||||||||||||| ||||||||||||||||||||||| || |||||||||||||||||||||    
T  39099248 tcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctcaaactacactaaatcaaacttcatttgtttaaaacatttctctcactaaaac 39099347  T
Q  198 ataaagctctccctc----tctctacaattttcaacattctggaaaagaaaacgaagaactc 255  Q
    |||||||||||||||    |||||||||||||||||||||| ||| | |||| |||||||||    
T  39099348 ataaagctctccctctctttctctacaattttcaacattctcgaagaaaaaatgaagaactc 39099409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 98 - 223
Target Start/End: Original strand, 50754057 - 50754182
Alignment:
Q  98 tcacaaccatcagatctactatacacgtgtaataattttaggcttctcaaaatacactaaatcaaacttcatttgcttcaaacatttctctcactaaaac 197  Q
    |||||||||||||||||| | |||||||||||||||  ||||||||||||| ||||| ||||||||||||||||| |||||||| |||||||||||||||    
T  50754057 tcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctcaaactacaccaaatcaaacttcatttgattcaaacacttctctcactaaaac 50754156  T
Q  198 ataaagctctccctctctctacaatt 223  Q
    ||||||||||||||||||||||||||    
T  50754157 ataaagctctccctctctctacaatt 50754182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 98 - 217
Target Start/End: Complemental strand, 52987664 - 52987545
Alignment:
Q  98 tcacaaccatcagatctactatacacgtgtaataattttaggcttctcaaaatacactaaatcaaacttcatttgcttcaaacatttctctcactaaaac 197  Q
    |||||||||||||||||| | |||||||||||||||  ||||||||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||    
T  52987664 tcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctcaaactacaccaaatcaaacttcatttgcttcaaatatttctctcactaaaac 52987565  T
Q  198 ataaagctctccctctctct 217  Q
    ||||||||||||||||||||    
T  52987564 ataaagctctccctctctct 52987545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 98 - 217
Target Start/End: Complemental strand, 7045314 - 7045196
Alignment:
Q  98 tcacaaccatcagatctactatacacgtgtaataattttaggcttctcaaaatacactaaatcaaacttcatttgcttcaaacatttctctcactaaaac 197  Q
    |||||||||||||||||| | |||||||||||||||  ||||||||||| | ||||  ||||||||||| ||||||||||||||||||||||||||||||    
T  7045314 tcacaaccatcagatctagtgtacacgtgtaataatcgtaggcttctcagactacatcaaatcaaactt-atttgcttcaaacatttctctcactaaaac 7045216  T
Q  198 ataaagctctccctctctct 217  Q
    ||||||||||||||||||||    
T  7045215 ataaagctctccctctctct 7045196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 98 - 217
Target Start/End: Complemental strand, 51362452 - 51362334
Alignment:
Q  98 tcacaaccatcagatctactatacacgtgtaataattttaggcttctcaaaatacactaaatcaaacttcatttgcttcaaacatttctctcactaaaac 197  Q
    ||||||||||||||| || | |||||||||||||||  ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  51362452 tcacaaccatcagatttagtgtacacgtgtaataatcctaggcttctcaaactacaccaaatcaaacttcatttgcttcaaacatttctctcactaaaac 51362353  T
Q  198 ataaagctctccctctctct 217  Q
    ||||| || |||||||||||    
T  51362352 ataaa-ctttccctctctct 51362334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 98 - 215
Target Start/End: Complemental strand, 19385329 - 19385212
Alignment:
Q  98 tcacaaccatcagatctactatacacgtgtaataattttaggcttctcaaaatacactaaatcaaacttcatttgcttcaaacatttctctcactaaaac 197  Q
    ||||||||||||||| || | |||||||||||||||| ||||||||||||| ||||  ||||||||||||||||||||||| |||||| |||||||||||    
T  19385329 tcacaaccatcagatttagtgtacacgtgtaataattctaggcttctcaaactacatcaaatcaaacttcatttgcttcaatcatttccctcactaaaac 19385230  T
Q  198 ataaagctctccctctct 215  Q
    ||||| ||||||||||||    
T  19385229 ataaaactctccctctct 19385212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 257 - 458
Target Start/End: Complemental strand, 19385201 - 19385005
Alignment:
Q  257 tgagtcttcatctcttccggccacacatgatgtttccggcacggtggtcaccggccaaaggcggcggcactgctgtaccggagaaccaaactcacccttt 356  Q
    ||||||||||||||||||||||||| |||||| |||||||  |||| || ||||         ||||||  || || | |||||||||||||||||||||    
T  19385201 tgagtcttcatctcttccggccacagatgatgattccggcgtggtgatcgccgg---------gcggcagcgccgtgctggagaaccaaactcacccttt 19385111  T
Q  357 tttaaaaacc----catttttcaacatccattttcgttttaaagtcaaattcgaactcggatcacgcaaaaacacaacgagaaagagtagatgtaaagat 452  Q
    || |||||      ||||||||||||||||||||| |||||||| ||||| |||||||||||| ||||||||||||||||||| |||||||| |||| ||    
T  19385110 ttaaaaaataaagtcatttttcaacatccattttctttttaaagccaaatccgaactcggatcgcgcaaaaacacaacgagaatgagtagatctaaatat 19385011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 98 - 184
Target Start/End: Complemental strand, 16277428 - 16277342
Alignment:
Q  98 tcacaaccatcagatctactatacacgtgtaataattttaggcttctcaaaatacactaaatcaaacttcatttgcttcaaacattt 184  Q
    |||||||||||| ||||| | |||||||||||||||  || |||||||||| ||||| ||||||||||||||||| |||||||||||    
T  16277428 tcacaaccatcatatctagtgtacacgtgtaataatcctacgcttctcaaactacaccaaatcaaacttcatttgtttcaaacattt 16277342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 257 - 305
Target Start/End: Complemental strand, 52987532 - 52987484
Alignment:
Q  257 tgagtcttcatctcttccggccacacatgatgtttccggcacggtggtc 305  Q
    |||||||||||||||| ||||||||||||||| ||||||| ||||||||    
T  52987532 tgagtcttcatctctttcggccacacatgatgattccggcgcggtggtc 52987484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 98 - 146
Target Start/End: Complemental strand, 17627245 - 17627197
Alignment:
Q  98 tcacaaccatcagatctactatacacgtgtaataattttaggcttctca 146  Q
    |||||||||||||||||| | |||||||||||||||| |||| ||||||    
T  17627245 tcacaaccatcagatctagtgtacacgtgtaataattctaggtttctca 17627197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 183 - 217
Target Start/End: Original strand, 31852242 - 31852276
Alignment:
Q  183 ttctctcactaaaacataaagctctccctctctct 217  Q
    ||||||||||||||||||||| |||||||||||||    
T  31852242 ttctctcactaaaacataaagttctccctctctct 31852276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 98 - 162
Target Start/End: Original strand, 23699379 - 23699443
Alignment:
Q  98 tcacaaccatcagatctactatacacgtgtaataattttaggcttctcaaaatacactaaatcaa 162  Q
    |||||||||||| ||||| | |||||||||||||||  ||||||| ||||| ||||  |||||||    
T  23699379 tcacaaccatcatatctaatgtacacgtgtaataatcctaggcttttcaaactacatcaaatcaa 23699443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 98 - 162
Target Start/End: Original strand, 23717834 - 23717898
Alignment:
Q  98 tcacaaccatcagatctactatacacgtgtaataattttaggcttctcaaaatacactaaatcaa 162  Q
    |||||||||||| ||||| | |||||||||||||||  ||||||| ||||| ||||  |||||||    
T  23717834 tcacaaccatcatatctaatgtacacgtgtaataatcctaggcttttcaaactacatcaaatcaa 23717898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 98 - 162
Target Start/End: Original strand, 23736290 - 23736354
Alignment:
Q  98 tcacaaccatcagatctactatacacgtgtaataattttaggcttctcaaaatacactaaatcaa 162  Q
    |||||||||||| ||||| | |||||||||||||||  ||||||| ||||| ||||  |||||||    
T  23736290 tcacaaccatcatatctaatgtacacgtgtaataatcctaggcttttcaaactacatcaaatcaa 23736354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 209; Significance: 1e-114; HSPs: 16)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 98 - 473
Target Start/End: Original strand, 46024078 - 46024461
Alignment:
Q  98 tcacaaccatcagatctactatacacgtgtaataattttaggcttctcaaaatacactaaatcaaacttcatttgcttcaaacatttctctcactaaaac 197  Q
    ||||||||||||||| || | |||||||||||||||  ||| ||||||||| |||| ||||||||||||||||||||||||| |||||||||||||||||    
T  46024078 tcacaaccatcagatatagtgtacacgtgtaataatcctagacttctcaaactacattaaatcaaacttcatttgcttcaaatatttctctcactaaaac 46024177  T
Q  198 ataaagctctccctct--ctctacaattttcaacattctggaaaagaaaacgaagaactcg--tgagtcttcatctcttccggccacacatgatgtttcc 293  Q
    |||||| |||||||||  ||||||||||||||||||| ||||||||||||||||||||||   | ||||||||||||||||| |||||||||||| ||||    
T  46024178 ataaagttctccctctatctctacaattttcaacattttggaaaagaaaacgaagaactcagattagtcttcatctcttccgaccacacatgatgattcc 46024277  T
Q  294 ggcacggtggtcaccggccaaaggcggcggcactgctgtaccggagaaccaaactcacccttttttaaaa----acccatttttcaacatccattttcgt 389  Q
    ||| |||||||| ||||||| ||||||||||   || ||  ||||||| || ||||||||||||| ||||    | ||||||||||||||||||||||||    
T  46024278 ggcgcggtggtcgccggccagaggcggcggcggcgccgtgacggagaatcagactcaccctttttaaaaactaaagccatttttcaacatccattttcgt 46024377  T
Q  390 tttaaagtcaaattcgaactcggatcacgcaaaaacacaacgagaaagagtagatgtaaagattaaaacacaaacgaaattttc 473  Q
    ||||||| ||||| |||| ||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  46024378 tttaaagccaaatccgaattcggatcgcgcaaaaacacaacgagaaggagtagatctaaagattaaaacacaaacgaaattttc 46024461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 98 - 445
Target Start/End: Original strand, 30428924 - 30429276
Alignment:
Q  98 tcacaaccatcagatctactatacacgtgtaataattttaggcttctcaaaatacactaaatcaaacttcatttgcttcaaacatttctctcactaaaac 197  Q
    |||||||||||||||||| | |||||||||||||||  ||||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  30428924 tcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctcaaactacaccaaatcaaacttcatttgcttcaaacatttatctcactaaaac 30429023  T
Q  198 ataaagctctccctctctctacaattttcaacattctggaaaagaaaacgaagaactc--gtgagtcttcatctcttccggccacacatgatgtttccgg 295  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||    |||||||||||||||||||||| |||||||| |||| |    
T  30429024 ataaagctccccctctctctacaattttcaacattctagaaaagaaaacgaagaactcagacgagtcttcatctcttccggccatacatgatgattcc-g 30429122  T
Q  296 cacggtggtcaccggccaaaggcggcggcactgctgtaccggagaaccaaactcacccttttttaaaaac-----ccatttttcaacatccattttcgtt 390  Q
    | |||||||| ||||||| |||||||| |   || || ||||||||||||||||| ||||||||||||||     |||||||||||||||||||||| ||    
T  30429123 cgcggtggtcgccggccagaggcggcgacggcgccgtgccggagaaccaaactca-ccttttttaaaaactaaagccatttttcaacatccattttcttt 30429221  T
Q  391 ttaaagtcaaattcgaactcggatcacgcaaaaacacaacgagaaagagtagatg 445  Q
    |||||| |||||||||||||||||| ||||||||||||||||||| |||||||||    
T  30429222 ttaaagccaaattcgaactcggatcgcgcaaaaacacaacgagaaggagtagatg 30429276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 98 - 215
Target Start/End: Complemental strand, 46573514 - 46573397
Alignment:
Q  98 tcacaaccatcagatctactatacacgtgtaataattttaggcttctcaaaatacactaaatcaaacttcatttgcttcaaacatttctctcactaaaac 197  Q
    |||||||||||||||||| | |||||||||||||||  ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  46573514 tcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctcaaactacaccaaatcaaacttcatttgcttcaaacatttctctcactaaaac 46573415  T
Q  198 ataaagctctccctctct 215  Q
    ||||||||||||||||||    
T  46573414 ataaagctctccctctct 46573397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 257 - 458
Target Start/End: Complemental strand, 46573382 - 46573177
Alignment:
Q  257 tgagtcttcatctcttccggccacacatgatgtttccggcacggtggtcaccggccaaaggcggcggcactgctgtaccggagaaccaaactcacccttt 356  Q
    ||||||||||||||||| || ||||||||||| || || | |||||||   |||||| |||| ||||  | || || || ||||||||||||||||||||    
T  46573382 tgagtcttcatctcttcagggcacacatgatgatttcgacgcggtggtagtcggccagaggcagcggtgccgccgtgccagagaaccaaactcacccttt 46573283  T
Q  357 tttaaaa----acccatttttcaacatccattttcgttttaaagtcaaattcgaactcggatcacgcaaaaacacaacgagaaagagtagatgtaaagat 452  Q
    || ||||    | ||||||||||||||||||||||||||||||| ||||| || ||||||||| ||||||| ||||||||||| |||||||| |||||||    
T  46573282 ttaaaaactaaagccatttttcaacatccattttcgttttaaagccaaatccggactcggatcgcgcaaaagcacaacgagaaggagtagatctaaagat 46573183  T
Q  453 taaaac 458  Q
    ||||||    
T  46573182 taaaac 46573177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 98 - 217
Target Start/End: Complemental strand, 15974950 - 15974831
Alignment:
Q  98 tcacaaccatcagatctactatacacgtgtaataattttaggcttctcaaaatacactaaatcaaacttcatttgcttcaaacatttctctcactaaaac 197  Q
    |||||||||||| || || | ||||| ||||||||| |||||||| ||||| ||||| |||||||||||||| |||||||||||||||||||||||||||    
T  15974950 tcacaaccatcatatttagtgtacacatgtaataatcttaggcttatcaaagtacaccaaatcaaacttcatctgcttcaaacatttctctcactaaaac 15974851  T
Q  198 ataaagctctccctctctct 217  Q
    ||||||||||| | ||||||    
T  15974850 ataaagctctctccctctct 15974831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 98 - 186
Target Start/End: Original strand, 33797982 - 33798070
Alignment:
Q  98 tcacaaccatcagatctactatacacgtgtaataattttaggcttctcaaaatacactaaatcaaacttcatttgcttcaaacatttct 186  Q
    |||||||||||||||||| |||||||||||||||||  ||| ||||||||| ||||  |||||||||||||||||||||||||||||||    
T  33797982 tcacaaccatcagatctagtatacacgtgtaataatcctagacttctcaaactacatcaaatcaaacttcatttgcttcaaacatttct 33798070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 257 - 300
Target Start/End: Original strand, 28396897 - 28396940
Alignment:
Q  257 tgagtcttcatctcttccggccacacatgatgtttccggcacgg 300  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  28396897 tgagtcttcatctcttccggccacacatgatgattccggcacgg 28396940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 257 - 300
Target Start/End: Original strand, 48691167 - 48691210
Alignment:
Q  257 tgagtcttcatctcttccggccacacatgatgtttccggcacgg 300  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  48691167 tgagtcttcatctcttccggccacacatgatgattccggcacgg 48691210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 175 - 217
Target Start/End: Original strand, 48305356 - 48305398
Alignment:
Q  175 tcaaacatttctctcactaaaacataaagctctccctctctct 217  Q
    |||||||||||||||| ||||||||||||||||||||||||||    
T  48305356 tcaaacatttctctcaataaaacataaagctctccctctctct 48305398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 175 - 217
Target Start/End: Original strand, 48691112 - 48691154
Alignment:
Q  175 tcaaacatttctctcactaaaacataaagctctccctctctct 217  Q
    ||||| |||||||||||||||||||||||||||||||||||||    
T  48691112 tcaaaaatttctctcactaaaacataaagctctccctctctct 48691154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 98 - 162
Target Start/End: Original strand, 5757438 - 5757502
Alignment:
Q  98 tcacaaccatcagatctactatacacgtgtaataattttaggcttctcaaaatacactaaatcaa 162  Q
    |||||||||||||||||| | |||||||||||||||  ||| ||||||||| ||||| |||||||    
T  5757438 tcacaaccatcagatctagtgtacacgtgtaataatcctagacttctcaaactacaccaaatcaa 5757502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 102 - 162
Target Start/End: Original strand, 32090633 - 32090693
Alignment:
Q  102 aaccatcagatctactatacacgtgtaataattttaggcttctcaaaatacactaaatcaa 162  Q
    |||||||| ||||| |||||||||||||||||  ||||||||||||| ||||| |||||||    
T  32090633 aaccatcaaatctagtatacacgtgtaataatcataggcttctcaaactacaccaaatcaa 32090693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 257 - 300
Target Start/End: Original strand, 48305411 - 48305454
Alignment:
Q  257 tgagtcttcatctcttccggccacacatgatgtttccggcacgg 300  Q
    |||||||||||| ||||||||||||||||||| |||||||||||    
T  48305411 tgagtcttcatcacttccggccacacatgatgattccggcacgg 48305454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 175 - 217
Target Start/End: Original strand, 28396842 - 28396884
Alignment:
Q  175 tcaaacatttctctcactaaaacataaagctctccctctctct 217  Q
    |||||||||||||||| |||||||||||| |||||||||||||    
T  28396842 tcaaacatttctctcaataaaacataaagttctccctctctct 28396884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 257 - 303
Target Start/End: Complemental strand, 15974818 - 15974772
Alignment:
Q  257 tgagtcttcatctcttccggccacacatgatgtttccggcacggtgg 303  Q
    |||||||||||||||||||  ||||||||||| ||||||| ||||||    
T  15974818 tgagtcttcatctcttccgatcacacatgatgattccggcgcggtgg 15974772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 143
Target Start/End: Original strand, 48691043 - 48691088
Alignment:
Q  98 tcacaaccatcagatctactatacacgtgtaataattttaggcttc 143  Q
    |||||||||||||||||| | |||||||||||||||  ||||||||    
T  48691043 tcacaaccatcagatctagtgtacacgtgtaataatcctaggcttc 48691088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 209; Significance: 1e-114; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 98 - 473
Target Start/End: Original strand, 13362821 - 13363211
Alignment:
Q  98 tcacaaccatcagatctactatacacgtgtaataattttaggcttctcaaaatacactaaatcaaacttcatttgcttcaaacatttctctcactaaaac 197  Q
    |||||||||||||||||| | || ||||||||||||  ||||||||||||| ||||| |||||||| |||||||||||||||||||||||||||||||||    
T  13362821 tcacaaccatcagatctagtgtatacgtgtaataatcataggcttctcaaactacaccaaatcaaaattcatttgcttcaaacatttctctcactaaaac 13362920  T
Q  198 ataaagctctccctct----------ctctacaattttcaacattctggaaaagaaaacgaagaactcg--tgagtcttcatctcttccggccacacatg 285  Q
    |||||||| |||||||          ||||||||||||||||||||||||||||||||||||||||||   |||||||| ||||||||||||||||||||    
T  13362921 ataaagctttccctctgtctctctctctctacaattttcaacattctggaaaagaaaacgaagaactcaaatgagtctt-atctcttccggccacacatg 13363019  T
Q  286 atgtttccggcacggtggtcaccggccaaaggcggcggcactgctgtaccggagaaccaaactcacccttttttaaaa----acccatttttcaacatcc 381  Q
    ||| ||||||| |||||||  ||||||| ||| ||||||   || ||||| |||||||||||||||||||||| ||||    | ||||||||||||||||    
T  13363020 atgattccggcgcggtggttgccggccagaggtggcggcggcgccgtacctgagaaccaaactcaccctttttaaaaactaaagccatttttcaacatcc 13363119  T
Q  382 attttcgttttaaagtcaaattcgaactcggatcacgcaaaaacacaacgagaaagagtagatgtaaagattaaaacacaaacgaaattttc 473  Q
    |||||||||||||||||||||  ||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  13363120 attttcgttttaaagtcaaatctgaactcggatcgcgcaaaaacacaacgagaaggagtagatctaaagattaaaacacaaacgaaattttc 13363211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 98 - 473
Target Start/End: Complemental strand, 23335721 - 23335335
Alignment:
Q  98 tcacaaccatcagatctactatacacgtgtaataattttaggcttctcaaaatacactaaatcaaacttcatttgcttcaaacatttctctcactaaaa- 196  Q
    |||||||||||||||||| | |||||||||||||||  ||||||||||||| ||||| |||||||| ||||||||| ||||||||||||||||||||||     
T  23335721 tcacaaccatcagatctagtgtacacgtgtaataatcataggcttctcaaactacaccaaatcaaagttcatttgcatcaaacatttctctcactaaaaa 23335622  T
Q  197 cataaagctctccctctctct----acaattttcaacattctggaaaagaaaacgaagaactcg--tgagtcttcatctcttccggccacacatgatgtt 290  Q
    |||||||||||||||||||||    ||||||||||||||| ||||||||||||| ||||||||   |||||||||||||||||| ||||||||||||| |    
T  23335621 cataaagctctccctctctctctctacaattttcaacattatggaaaagaaaacaaagaactcagatgagtcttcatctcttccagccacacatgatgat 23335522  T
Q  291 tccggcacggtggtcaccggccaaaggcggcggcactgctgtaccggagaaccaaactcacccttttttaaaa----acccatttttcaacatccatttt 386  Q
    |||||| |||||||| ||||||| ||||||||||   || || |||||||| |||||||||||||||  ||||    | |||||||||||||| ||||||    
T  23335521 tccggcgcggtggtcgccggccagaggcggcggcggcgccgtgccggagaatcaaactcacccttttaaaaaactaaagccatttttcaacattcatttt 23335422  T
Q  387 cgttttaaagtcaaattcgaactcggatcacgcaaaaacacaacgagaaagagtagatgtaaagattaaaacacaaacgaaattttc 473  Q
    |||||||||| | ||| |||||||||||| |||||||||||||| |||| |||||||| ||||||||||||||||||| ||||||||    
T  23335421 cgttttaaagcctaatccgaactcggatcgcgcaaaaacacaactagaatgagtagatttaaagattaaaacacaaacaaaattttc 23335335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 158; E-Value: 8e-84
Query Start/End: Original strand, 159 - 472
Target Start/End: Complemental strand, 25017185 - 25016873
Alignment:
Q  159 tcaaacttcatttgcttcaaacatttctctcactaaaacataaagctctccctctctctacaattttcaacattctggaaaagaaaacgaagaactc--g 256  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       
T  25017185 tcaaacttcatttgcttcaaacatttctctcactaaaacataaagctctccctctctctacaattttcaacattctggaaaagaaaacgaagtactcaga 25017086  T
Q  257 tgagtcttcatctcttccggccacacatgatgtttccggcacggtggtcaccggccaaaggcggcggcactgctgtaccggagaaccaaactcacccttt 356  Q
    ||||||||||||||||||||| |||||||||| ||| | | || ||||| ||||||| ||||| |||| |  | ||   |||||||||||||||||||||    
T  25017085 tgagtcttcatctcttccggcaacacatgatgattctgacgcgatggtcgccggccagaggcgacggcgccaccgtgttggagaaccaaactcacccttt 25016986  T
Q  357 tttaa----aaacccatttttcaacatccattttcgttttaaagtcaaattcgaactcggatcacgcaaaaacacaacgagaaagagtagatgtaaagat 452  Q
    || ||    ||| ||||||||||||||||||||| |||||       ||| |||||||||||| ||||||||||||||||| | |||||||| |||||||    
T  25016985 ttaaaaactaaagccatttttcaacatccatttttgtttt-------aatccgaactcggatcgcgcaaaaacacaacgaggaggagtagatctaaagat 25016893  T
Q  453 taaaacacaaacgaaatttt 472  Q
    ||||||||||| ||||||||    
T  25016892 taaaacacaaatgaaatttt 25016873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 100 - 223
Target Start/End: Complemental strand, 2827079 - 2826956
Alignment:
Q  100 acaaccatcagatctactatacacgtgtaataattttaggcttctcaaaatacactaaatcaaacttcatttgcttcaaacatttctctcactaaaacat 199  Q
    |||||||||||||||| | |||||||||||| || |||||||||||||| ||||| |||||||| |||||||||||||||||||| ||||||||||||||    
T  2827079 acaaccatcagatctagtgtacacgtgtaattatcttaggcttctcaaactacaccaaatcaaatttcatttgcttcaaacatttatctcactaaaacat 2826980  T
Q  200 aaagctctccctctctctacaatt 223  Q
    ||||||||||||||||||||||||    
T  2826979 aaagctctccctctctctacaatt 2826956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 150 - 255
Target Start/End: Original strand, 42512277 - 42512384
Alignment:
Q  150 tacactaaatcaaacttcatttgcttcaaacatttctctcactaaaacataaagctctcc--ctctctctacaattttcaacattctggaaaagaaaacg 247  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  42512277 tacaccaaatcaaacttcatttacttcaaacatttctctcactaaaacctaaagctctccctctctctctacaattttcaacattctggaaaagaaaacg 42512376  T
Q  248 aagaactc 255  Q
    ||||||||    
T  42512377 aagaactc 42512384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 98 - 208
Target Start/End: Complemental strand, 28070167 - 28070057
Alignment:
Q  98 tcacaaccatcagatctactatacacgtgtaataattttaggcttctcaaaatacactaaatcaaacttcatttgcttcaaacatttctctcactaaaac 197  Q
    ||||||| |||||||||| | |||||||||||||||  ||| ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  28070167 tcacaactatcagatctagtgtacacgtgtaataatcctagacttctcaaactacaccaaatcaaacttcatttgcttcaaacatttctctcactaaaac 28070068  T
Q  198 ataaagctctc 208  Q
    |||||||||||    
T  28070067 ataaagctctc 28070057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 334 - 458
Target Start/End: Complemental strand, 28069983 - 28069858
Alignment:
Q  334 ccggagaaccaaactcacccttttttaaaa----acccatttttcaacatccattttcgttttaaagtcaaattcgaactcggatcacgcaaaaacacaa 429  Q
    ||||||||||||| ||||||||||| ||||    |  ||| |||||||||||||||||||||||||| ||||| |||||||||||| |||||||||||||    
T  28069983 ccggagaaccaaagtcaccctttttaaaaactaaagtcatatttcaacatccattttcgttttaaagccaaatccgaactcggatcccgcaaaaacacaa 28069884  T
Q  430 cgagaaagagtagatgtaaagattaaaac 458  Q
    |   || |||||||| |||||||||||||    
T  28069883 c---aaggagtagatctaaagattaaaac 28069858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 98 - 163
Target Start/End: Complemental strand, 16668808 - 16668743
Alignment:
Q  98 tcacaaccatcagatctactatacacgtgtaataattttaggcttctcaaaatacactaaatcaaa 163  Q
    |||||||||||||||||| | |||||||||||||||  ||||||||||||| ||||| ||||||||    
T  16668808 tcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctcaaactacaccaaatcaaa 16668743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 98 - 162
Target Start/End: Complemental strand, 18465570 - 18465506
Alignment:
Q  98 tcacaaccatcagatctactatacacgtgtaataattttaggcttctcaaaatacactaaatcaa 162  Q
    |||||||||||||||||| | ||||||||||||||| |||| ||||||||| ||||| |||||||    
T  18465570 tcacaaccatcagatctagtgtacacgtgtaataatcttagacttctcaaactacaccaaatcaa 18465506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 98 - 148
Target Start/End: Complemental strand, 25017231 - 25017181
Alignment:
Q  98 tcacaaccatcagatctactatacacgtgtaataattttaggcttctcaaa 148  Q
    |||||||||||||||||| | ||||||||||||||||||||| ||||||||    
T  25017231 tcacaaccatcagatctagtgtacacgtgtaataattttaggtttctcaaa 25017181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 175 - 223
Target Start/End: Original strand, 34329247 - 34329293
Alignment:
Q  175 tcaaacatttctctcactaaaacataaagctctccctctctctacaatt 223  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||    
T  34329247 tcaaacatttctctcactaaaacataaagctct--ctctctctacaatt 34329293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 257 - 313
Target Start/End: Complemental strand, 28070045 - 28069989
Alignment:
Q  257 tgagtcttcatctcttccggccacacatgatgtttccggcacggtggtcaccggcca 313  Q
    |||||||||||||||||||||||||||||||| ||||| | ||||||||  ||||||    
T  28070045 tgagtcttcatctcttccggccacacatgatgattccgacgcggtggtcgtcggcca 28069989  T

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Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 260 - 300
Target Start/End: Original strand, 34329301 - 34329341
Alignment:
Q  260 gtcttcatctcttccggccacacatgatgtttccggcacgg 300  Q
    ||||||||||||||||||||||||||||| || ||||||||    
T  34329301 gtcttcatctcttccggccacacatgatgatttcggcacgg 34329341  T

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Target: chr6 (Bit Score: 94; Significance: 1e-45; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 98 - 223
Target Start/End: Complemental strand, 24737705 - 24737580
Alignment:
Q  98 tcacaaccatcagatctactatacacgtgtaataattttaggcttctcaaaatacactaaatcaaacttcatttgcttcaaacatttctctcactaaaac 197  Q
    |||||||||||||||||| | |||||||||||||||  ||||||||| ||| ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  24737705 tcacaaccatcagatctagtgtacacgtgtaataatcctaggcttcttaaactacaccaaatcaaacttcatttgcttcaaacatttctctcactaaaac 24737606  T
Q  198 ataaagctctccctctctctacaatt 223  Q
    ||||| ||||||||||||||||||||    
T  24737605 ataaaactctccctctctctacaatt 24737580  T

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Target: chr6; HSP #2
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 98 - 217
Target Start/End: Complemental strand, 33346385 - 33346266
Alignment:
Q  98 tcacaaccatcagatctactatacacgtgtaataattttaggcttctcaaaatacactaaatcaaacttcatttgcttcaaacatttctctcactaaaac 197  Q
    |||||||||||| ||||| | |||||||||||||||| ||||||||||||| |||   |||||||||||| |||||||||||||||||||||||||||||    
T  33346385 tcacaaccatcaaatctagtgtacacgtgtaataattataggcttctcaaactacgtcaaatcaaacttcgtttgcttcaaacatttctctcactaaaac 33346286  T
Q  198 ataaagctctccctctctct 217  Q
    |||||| |||||||||||||    
T  33346285 ataaagttctccctctctct 33346266  T

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Target: chr6; HSP #3
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 98 - 223
Target Start/End: Original strand, 877259 - 877384
Alignment:
Q  98 tcacaaccatcagatctactatacacgtgtaataattttaggcttctcaaaatacactaaatcaaacttcatttgcttcaaacatttctctcactaaaac 197  Q
    |||||||||| |||||   | ||||||| |||||||  || |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  877259 tcacaaccattagatcaggtgtacacgtataataatcataagcttctcaaactacaccaaatcaaacttcatttgcttcaaacatttctctcactaaaac 877358  T
Q  198 ataaagctctccctctctctacaatt 223  Q
    | ||||||||||||||||||||||||    
T  877359 aaaaagctctccctctctctacaatt 877384  T

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Target: chr6; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 257 - 305
Target Start/End: Complemental strand, 24737575 - 24737527
Alignment:
Q  257 tgagtcttcatctcttccggccacacatgatgtttccggcacggtggtc 305  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  24737575 tgagtcttcatctcttccggccacacatgatgattccggcacggtggtc 24737527  T

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Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 100 - 162
Target Start/End: Original strand, 29157279 - 29157341
Alignment:
Q  100 acaaccatcagatctactatacacgtgtaataattttaggcttctcaaaatacactaaatcaa 162  Q
    |||||||||||||||| | |||||||||||||||  ||||||||||||| ||||| |||||||    
T  29157279 acaaccatcagatctagtgtacacgtgtaataatactaggcttctcaaactacaccaaatcaa 29157341  T

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Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 98 - 162
Target Start/End: Original strand, 18611240 - 18611304
Alignment:
Q  98 tcacaaccatcagatctactatacacgtgtaataattttaggcttctcaaaatacactaaatcaa 162  Q
    |||||||||||||||||| | |||||||||||||||  |||||||||||||  |||| |||||||    
T  18611240 tcacaaccatcagatctagtgtacacgtgtaataatcataggcttctcaaaccacaccaaatcaa 18611304  T

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Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 257 - 296
Target Start/End: Complemental strand, 33346253 - 33346214
Alignment:
Q  257 tgagtcttcatctcttccggccacacatgatgtttccggc 296  Q
    |||||||||||||||| ||||||||||||||| |||||||    
T  33346253 tgagtcttcatctctttcggccacacatgatgattccggc 33346214  T

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Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 258 - 296
Target Start/End: Original strand, 877387 - 877425
Alignment:
Q  258 gagtcttcatctcttccggccacacatgatgtttccggc 296  Q
    |||||||||||||||| |||||||||||||| |||||||    
T  877387 gagtcttcatctcttcaggccacacatgatgattccggc 877425  T

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Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 98 - 146
Target Start/End: Original strand, 34399692 - 34399740
Alignment:
Q  98 tcacaaccatcagatctactatacacgtgtaataattttaggcttctca 146  Q
    |||||| ||||||||||| | |||||||||||||||  |||||||||||    
T  34399692 tcacaatcatcagatctagtgtacacgtgtaataatcctaggcttctca 34399740  T

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Target: scaffold0238 (Bit Score: 67; Significance: 2e-29; HSPs: 2)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 98 - 196
Target Start/End: Complemental strand, 25246 - 25148
Alignment:
Q  98 tcacaaccatcagatctactatacacgtgtaataattttaggcttctcaaaatacactaaatcaaacttcatttgcttcaaacatttctctcactaaaa 196  Q
    ||||||||||||||| || | ||||||||| ||||| ||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||    
T  25246 tcacaaccatcagatttagtgtacacgtgtcataatcttaggtttctcaaactacaccaaatcaaacttcatttgcttcaaacatttctctcactaaaa 25148  T

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Target: scaffold0238; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 257 - 311
Target Start/End: Complemental strand, 25107 - 25053
Alignment:
Q  257 tgagtcttcatctcttccggccacacatgatgtttccggcacggtggtcaccggc 311  Q
    |||||||||||||||||||||||||||||||| ||||||| | |||||| |||||    
T  25107 tgagtcttcatctcttccggccacacatgatgattccggcgcagtggtcgccggc 25053  T

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