View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1172_low_27 (Length: 502)

Name: NF1172_low_27
Description: NF1172
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1172_low_27
NF1172_low_27
[»] chr1 (17 HSPs)
chr1 (242-414)||(18808696-18808868)
chr1 (11-124)||(18808972-18809085)
chr1 (242-329)||(39001950-39002037)
chr1 (242-329)||(3695409-3695496)
chr1 (243-329)||(6750310-6750396)
chr1 (245-329)||(41998881-41998965)
chr1 (242-324)||(11121865-11121947)
chr1 (248-329)||(794916-794997)
chr1 (248-329)||(571650-571731)
chr1 (248-329)||(26653945-26654026)
chr1 (242-311)||(36290612-36290681)
chr1 (254-342)||(1585851-1585938)
chr1 (245-329)||(24909510-24909594)
chr1 (248-329)||(44272362-44272444)
chr1 (266-325)||(4792591-4792650)
chr1 (242-305)||(7409822-7409885)
chr1 (291-329)||(9224872-9224910)
[»] chr3 (15 HSPs)
chr3 (242-339)||(36404221-36404317)
chr3 (242-329)||(39391960-39392047)
chr3 (243-329)||(45602987-45603073)
chr3 (248-320)||(16353494-16353566)
chr3 (245-325)||(35534489-35534569)
chr3 (243-329)||(37115887-37115973)
chr3 (242-329)||(29360485-29360572)
chr3 (242-329)||(46487273-46487359)
chr3 (249-329)||(14201720-14201798)
chr3 (242-329)||(48944104-48944191)
chr3 (247-329)||(52742355-52742437)
chr3 (242-316)||(54882991-54883065)
chr3 (242-318)||(3618339-3618415)
chr3 (244-307)||(47599389-47599452)
chr3 (245-315)||(48644538-48644608)
[»] scaffold0306 (1 HSPs)
scaffold0306 (242-329)||(13055-13142)
[»] scaffold0152 (1 HSPs)
scaffold0152 (242-329)||(22185-22272)
[»] chr8 (18 HSPs)
chr8 (244-340)||(30204649-30204744)
chr8 (248-329)||(23403601-23403682)
chr8 (243-329)||(4623850-4623936)
chr8 (242-330)||(39436843-39436931)
chr8 (242-329)||(14842311-14842398)
chr8 (242-338)||(36470134-36470230)
chr8 (248-340)||(23275532-23275623)
chr8 (242-329)||(21567710-21567797)
chr8 (262-329)||(22798544-22798611)
chr8 (243-329)||(16655981-16656067)
chr8 (248-329)||(3001382-3001463)
chr8 (247-340)||(29958518-29958610)
chr8 (242-330)||(36046528-36046615)
chr8 (243-329)||(37630005-37630091)
chr8 (244-325)||(4234185-4234266)
chr8 (244-325)||(41787503-41787584)
chr8 (264-329)||(45310036-45310101)
chr8 (291-329)||(4414229-4414267)
[»] chr6 (11 HSPs)
chr6 (242-330)||(2814889-2814977)
chr6 (242-325)||(444528-444611)
chr6 (242-329)||(24640351-24640438)
chr6 (242-329)||(1067803-1067891)
chr6 (244-329)||(6200163-6200248)
chr6 (242-329)||(23774072-23774159)
chr6 (243-338)||(26393989-26394083)
chr6 (244-308)||(34710135-34710199)
chr6 (251-313)||(2993592-2993654)
chr6 (242-292)||(4032326-4032376)
chr6 (290-329)||(12324175-12324214)
[»] chr4 (14 HSPs)
chr4 (242-329)||(35929710-35929797)
chr4 (242-329)||(21555383-21555470)
chr4 (242-329)||(36609412-36609500)
chr4 (249-329)||(56100144-56100224)
chr4 (243-329)||(12701041-12701127)
chr4 (242-329)||(23249473-23249560)
chr4 (244-321)||(827840-827917)
chr4 (243-329)||(44243696-44243782)
chr4 (242-329)||(19598370-19598457)
chr4 (244-329)||(35749388-35749473)
chr4 (243-307)||(27733401-27733465)
chr4 (248-329)||(41842791-41842871)
chr4 (283-329)||(53584606-53584652)
chr4 (242-281)||(53583470-53583509)
[»] chr2 (24 HSPs)
chr2 (242-329)||(27004452-27004539)
chr2 (242-328)||(15070389-15070475)
chr2 (245-329)||(37060081-37060165)
chr2 (242-329)||(5958969-5959056)
chr2 (242-326)||(4382213-4382297)
chr2 (242-329)||(21423368-21423455)
chr2 (243-329)||(6974517-6974603)
chr2 (244-329)||(5807321-5807405)
chr2 (248-329)||(30393597-30393678)
chr2 (242-329)||(28107487-28107574)
chr2 (243-329)||(13274204-13274289)
chr2 (247-329)||(24475936-24476018)
chr2 (243-329)||(30609686-30609772)
chr2 (245-329)||(10217357-10217441)
chr2 (242-329)||(37802835-37802922)
chr2 (268-329)||(37140159-37140220)
chr2 (242-329)||(14786243-14786324)
chr2 (251-329)||(22194291-22194369)
chr2 (249-326)||(43022888-43022964)
chr2 (242-298)||(30757183-30757239)
chr2 (245-308)||(27969511-27969574)
chr2 (242-304)||(7747944-7748006)
chr2 (275-323)||(27404647-27404695)
chr2 (242-308)||(15431254-15431320)
[»] chr5 (18 HSPs)
chr5 (243-329)||(3729333-3729419)
chr5 (242-329)||(9793634-9793721)
chr5 (243-329)||(8159070-8159156)
chr5 (243-329)||(41929344-41929430)
chr5 (244-329)||(34766885-34766970)
chr5 (242-329)||(9793731-9793818)
chr5 (243-330)||(21020685-21020772)
chr5 (242-329)||(39508315-39508402)
chr5 (243-328)||(21583853-21583938)
chr5 (242-329)||(20736157-20736244)
chr5 (249-325)||(20815677-20815753)
chr5 (254-329)||(25081770-25081845)
chr5 (254-329)||(25139739-25139814)
chr5 (247-329)||(9913805-9913887)
chr5 (244-306)||(41910219-41910281)
chr5 (247-329)||(3711185-3711271)
chr5 (243-329)||(2068966-2069048)
chr5 (242-292)||(38451038-38451088)
[»] scaffold0302 (1 HSPs)
scaffold0302 (243-329)||(18503-18589)
[»] chr7 (8 HSPs)
chr7 (244-329)||(8163644-8163729)
chr7 (248-329)||(35589412-35589493)
chr7 (242-329)||(40337065-40337152)
chr7 (242-329)||(41326044-41326131)
chr7 (242-329)||(28089136-28089224)
chr7 (244-329)||(2362383-2362468)
chr7 (242-298)||(43403210-43403266)
chr7 (244-277)||(31637769-31637802)
[»] scaffold0025 (1 HSPs)
scaffold0025 (245-329)||(67875-67959)
[»] scaffold0532 (1 HSPs)
scaffold0532 (242-329)||(11322-11409)
[»] scaffold0121 (1 HSPs)
scaffold0121 (242-329)||(37402-37489)
[»] scaffold1248 (1 HSPs)
scaffold1248 (243-329)||(971-1057)
[»] scaffold0952 (1 HSPs)
scaffold0952 (243-329)||(1256-1342)
[»] scaffold0140 (1 HSPs)
scaffold0140 (242-329)||(21479-21566)


Alignment Details
Target: chr1 (Bit Score: 137; Significance: 2e-71; HSPs: 17)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 242 - 414
Target Start/End: Complemental strand, 18808868 - 18808696
Alignment:
Q  242 gggactaaaactaaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaaagaggctctaat 341  Q
    |||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||| |||||||||||||||| |||||||||  ||||||||||    
T  18808868 gggactaaaactaaaacatataaaaggataactattgtgagaagaagacttgtatatttcataaactgaaaacaaaaattatttcaaa--aggctctaat 18808771  T
Q  342 taactcttagcttgtgccaaataactaatagttttcaataactaactctata--atatatgctaatatatttttt 414  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  18808770 taactcttagcttgtgccaaataactaatagttttcaataactaactctataatatatatgctaatatatttttt 18808696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 11 - 124
Target Start/End: Complemental strand, 18809085 - 18808972
Alignment:
Q  11 cagagagcaagagaagaaaattggacaagacagagttttgtaaatttactgatcaataagttagttatatatatagcttctattcataaatgatgagaat 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18809085 cagagagcaagagaagaaaattggacaagacagagttttgtaaatttactgatcaataagttagttatatatatagcttctattcataaatgatgagaat 18808986  T
Q  111 ctaagagcctgtct 124  Q
    |||| |||||||||    
T  18808985 ctaacagcctgtct 18808972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 242 - 329
Target Start/End: Complemental strand, 39002037 - 39001950
Alignment:
Q  242 gggactaaaactaaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaa 329  Q
    ||||||||||||||||||| |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  39002037 gggactaaaactaaaacatgtaaaaggataactattgcaaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaa 39001950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 242 - 329
Target Start/End: Complemental strand, 3695496 - 3695409
Alignment:
Q  242 gggactaaaactaaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaa 329  Q
    ||||||||||||||||||| ||||| |||||||||| ||||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  3695496 gggactaaaactaaaacatgtaaaatgataactattatgaaaaggggacttgtatatttcaaaaaccgaaaacaaaaactatttcaaa 3695409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 243 - 329
Target Start/End: Original strand, 6750310 - 6750396
Alignment:
Q  243 ggactaaaactaaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaa 329  Q
    |||||||||||||||||| ||||| |||||||||||||||||  ||| |||||||||||||||||||||||||||||||||||||||    
T  6750310 ggactaaaactaaaacatgtaaaaagataactattgtgaaaaagggatttgtatatttcaaaaactgaaaacaaaaactatttcaaa 6750396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 245 - 329
Target Start/End: Original strand, 41998881 - 41998965
Alignment:
Q  245 actaaaactaaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaa 329  Q
    |||||||||||||||||||||| ||||| |||||||| |||| ||||||||||||||||||| ||||||||||||||||||||||    
T  41998881 actaaaactaaaacatataaaaagataaatattgtgagaagaagacttgtatatttcaaaaaatgaaaacaaaaactatttcaaa 41998965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 242 - 324
Target Start/End: Complemental strand, 11121947 - 11121865
Alignment:
Q  242 gggactaaaactaaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatt 324  Q
    ||||||||||||||||||| ||||| |||||||||||||  |||| |||||||||||||||||||||||||||||||||||||    
T  11121947 gggactaaaactaaaacatgtaaaatgataactattgtgcgaagatgacttgtatatttcaaaaactgaaaacaaaaactatt 11121865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 248 - 329
Target Start/End: Complemental strand, 794997 - 794916
Alignment:
Q  248 aaaactaaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaa 329  Q
    ||||||||||||| |||||||||||||||||||| |||| ||| |||||||||||||||||||||||||||| |||||||||    
T  794997 aaaactaaaacatgtaaaaggataactattgtgagaagaagacctgtatatttcaaaaactgaaaacaaaaaatatttcaaa 794916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 248 - 329
Target Start/End: Complemental strand, 571731 - 571650
Alignment:
Q  248 aaaactaaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaa 329  Q
    ||||||||||||| ||||| |||||||||| ||| |||||||| | ||||||||||||||||||||||||||||||||||||    
T  571731 aaaactaaaacatgtaaaatgataactattatgagaagaggacgtatatatttcaaaaactgaaaacaaaaactatttcaaa 571650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 248 - 329
Target Start/End: Original strand, 26653945 - 26654026
Alignment:
Q  248 aaaactaaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaa 329  Q
    |||| |||||||| |||||||||||| ||||||| |||||||| ||||||||||||||| ||||||||||||||||||||||    
T  26653945 aaaattaaaacatgtaaaaggataaccattgtgagaagaggacctgtatatttcaaaaattgaaaacaaaaactatttcaaa 26654026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 242 - 311
Target Start/End: Complemental strand, 36290681 - 36290612
Alignment:
Q  242 gggactaaaactaaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaaactgaa 311  Q
    ||||||||||||||||||| ||||| |||||||||||| | |||||||||||||||||||||||||||||    
T  36290681 gggactaaaactaaaacatgtaaaatgataactattgtcagaagaggacttgtatatttcaaaaactgaa 36290612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 254 - 342
Target Start/End: Complemental strand, 1585938 - 1585851
Alignment:
Q  254 aaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaaagaggctctaatt 342  Q
    ||||||| |||||||||||||||||| | |||| ||||||||||||||||||||| |||||| |||||||||| ||| |||||||||||    
T  1585938 aaaacatgtaaaaggataactattgtaagaagaagacttgtatatttcaaaaactaaaaacataaactatttc-aaacaggctctaatt 1585851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 245 - 329
Target Start/End: Original strand, 24909510 - 24909594
Alignment:
Q  245 actaaaactaaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaa 329  Q
    |||||||| |||| || |||||||||||||||||||| ||||| ||| |||||||| |||||||||||| |||||||||||||||    
T  24909510 actaaaacgaaaatatgtaaaaggataactattgtgagaagagaactagtatattttaaaaactgaaaataaaaactatttcaaa 24909594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 248 - 329
Target Start/End: Original strand, 44272362 - 44272444
Alignment:
Q  248 aaaactaaaacatataaaaggataactattgtgaaaagaggacttgtatatttc-aaaaactgaaaacaaaaactatttcaaa 329  Q
    ||||||||||||| |||||  ||||| ||| ||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  44272362 aaaactaaaacatgtaaaataataaccattatgaaaagagaacttgtatatttcaaaaaactgaaaacaaaaactatttcaaa 44272444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 266 - 325
Target Start/End: Original strand, 4792591 - 4792650
Alignment:
Q  266 aggataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactattt 325  Q
    |||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||    
T  4792591 aggataactattgtgagaagagaacttgtatatttcaaaaactaaaaacaaaaactattt 4792650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 242 - 305
Target Start/End: Original strand, 7409822 - 7409885
Alignment:
Q  242 gggactaaaactaaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaa 305  Q
    ||||||||||||||||||| |||||||||||||||| ||| ||||| |||  ||||||||||||    
T  7409822 gggactaaaactaaaacatgtaaaaggataactattatgagaagagaactattatatttcaaaa 7409885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 291 - 329
Target Start/End: Original strand, 9224872 - 9224910
Alignment:
Q  291 ttgtatatttcaaaaactgaaaacaaaaactatttcaaa 329  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  9224872 ttgtgtatttcaaaaactgaaaacaaaaactatttcaaa 9224910  T

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Target: chr3 (Bit Score: 82; Significance: 2e-38; HSPs: 15)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 242 - 339
Target Start/End: Original strand, 36404221 - 36404317
Alignment:
Q  242 gggactaaaactaaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaaagaggctcta 339  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  36404221 gggactaaaactaaaacatgtaaaaggataactattgtgagaagaggacttgtatatttcaaaaactgaaaacaaaaactatttc-aaagaggctcta 36404317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 242 - 329
Target Start/End: Complemental strand, 39392047 - 39391960
Alignment:
Q  242 gggactaaaactaaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaa 329  Q
    ||||||||||||||||||| |||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  39392047 gggactaaaactaaaacatgtaaaaggataactattgtgaaaagaaaacttgtatatttcaaaaactgaaaacaaaaactatttcaaa 39391960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 243 - 329
Target Start/End: Complemental strand, 45603073 - 45602987
Alignment:
Q  243 ggactaaaactaaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaa 329  Q
    |||||||||||||||||| |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||    
T  45603073 ggactaaaactaaaacatgtaaaaggataactattgtgataagatgacttgtatatttcaaaaactgaaaacaaaaactatttcaaa 45602987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 248 - 320
Target Start/End: Original strand, 16353494 - 16353566
Alignment:
Q  248 aaaactaaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaac 320  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16353494 aaaactaaaacatgtaaaaggataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaac 16353566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 245 - 325
Target Start/End: Complemental strand, 35534569 - 35534489
Alignment:
Q  245 actaaaactaaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactattt 325  Q
    |||||||||||||||||||||| |||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||    
T  35534569 actaaaactaaaacatataaaatgataactattgtgagaagaagacttgtatatttcaaaaactgaaaacaaaaactattt 35534489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 243 - 329
Target Start/End: Original strand, 37115887 - 37115973
Alignment:
Q  243 ggactaaaactaaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaa 329  Q
    |||||||||||||||||||||||| ||||||||||| || |||| ||||| ||||||||||||||||||||||||||||||||||||    
T  37115887 ggactaaaactaaaacatataaaatgataactattgcgagaagatgacttatatatttcaaaaactgaaaacaaaaactatttcaaa 37115973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 242 - 329
Target Start/End: Complemental strand, 29360572 - 29360485
Alignment:
Q  242 gggactaaaactaaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaa 329  Q
    ||||||||||||||||||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||| ||||| | |||||||    
T  29360572 gggactaaaactaaaacatgtaaaaggataactactgtgagaagaggacttgtatatttcaaaaactgaaaagaaaaattgtttcaaa 29360485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 242 - 329
Target Start/End: Complemental strand, 46487359 - 46487273
Alignment:
Q  242 gggactaaaactaaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaa 329  Q
    ||||||||||||||||||||||||| |||||||||||||| |||| ||||| |||||||||||||||||||| |||||||||||||||    
T  46487359 gggactaaaactaaaacatataaaatgataactattgtgagaagaagacttatatatttcaaaaactgaaaa-aaaaactatttcaaa 46487273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 249 - 329
Target Start/End: Complemental strand, 14201798 - 14201720
Alignment:
Q  249 aaactaaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaa 329  Q
    |||||||||||| |||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  14201798 aaactaaaacatgtaaaagaataactattgtgaaaagaggactt--atatttcaaaaactgaaaacaaaaactatttcaaa 14201720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 242 - 329
Target Start/End: Original strand, 48944104 - 48944191
Alignment:
Q  242 gggactaaaactaaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaa 329  Q
    ||||||||||| ||||||| ||||| |||||||||||| | ||||||||||||||||||||||| || |||| |||||||||||||||    
T  48944104 gggactaaaacaaaaacatgtaaaatgataactattgtaagaagaggacttgtatatttcaaaagctaaaaagaaaaactatttcaaa 48944191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 247 - 329
Target Start/End: Complemental strand, 52742437 - 52742355
Alignment:
Q  247 taaaactaaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaa 329  Q
    ||||||||||| || ||||| ||||||||||| || ||||| | ||||||||||||||||||| |||||||||||||||||||    
T  52742437 taaaactaaaatatgtaaaatgataactattgcgataagagaatttgtatatttcaaaaactggaaacaaaaactatttcaaa 52742355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 242 - 316
Target Start/End: Original strand, 54882991 - 54883065
Alignment:
Q  242 gggactaaaactaaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaa 316  Q
    ||||||||||||||||||  ||||||||||| |||||||| |||||||||| |||||||||||||| ||||||||    
T  54882991 gggactaaaactaaaacacgtaaaaggataaatattgtgagaagaggacttctatatttcaaaaaccgaaaacaa 54883065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 242 - 318
Target Start/End: Original strand, 3618339 - 3618415
Alignment:
Q  242 gggactaaaactaaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaa 318  Q
    ||||||||||||||||||| ||||| ||||| |||||||| ||||  |||||||||||||| |||||||||||||||    
T  3618339 gggactaaaactaaaacatgtaaaaagataaatattgtgagaagaaaacttgtatatttcagaaactgaaaacaaaa 3618415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 244 - 307
Target Start/End: Complemental strand, 47599452 - 47599389
Alignment:
Q  244 gactaaaactaaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaaac 307  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||| |||||||||| ||||||    
T  47599452 gactaaaactaaaacatgtaaaaggataactattgtgagaagaggatttgtatattttaaaaac 47599389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 245 - 315
Target Start/End: Complemental strand, 48644608 - 48644538
Alignment:
Q  245 actaaaactaaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaaactgaaaaca 315  Q
    |||||||||||||||| ||||| ||||| |||||||| |||| || |||||||||||||||| ||||||||    
T  48644608 actaaaactaaaacatgtaaaatgataaatattgtgagaagatgatttgtatatttcaaaaattgaaaaca 48644538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 80; Significance: 3e-37; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 242 - 329
Target Start/End: Original strand, 13055 - 13142
Alignment:
Q  242 gggactaaaactaaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaa 329  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  13055 gggactaaaactaaaacatgtaaaaggataactattgtgagaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaa 13142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 80; Significance: 3e-37; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 242 - 329
Target Start/End: Complemental strand, 22272 - 22185
Alignment:
Q  242 gggactaaaactaaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaa 329  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  22272 gggactaaaactaaaacatgtaaaaggataactattgtgagaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaa 22185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 77; Significance: 2e-35; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 244 - 340
Target Start/End: Original strand, 30204649 - 30204744
Alignment:
Q  244 gactaaaactaaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaaagaggctctaa 340  Q
    ||||||||||||||||| |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  30204649 gactaaaactaaaacatgtaaaaggataactattgtgagaagatgacttgtatatttcaaaaactgaaaacaaaaactatttc-aaagaggctctaa 30204744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 248 - 329
Target Start/End: Complemental strand, 23403682 - 23403601
Alignment:
Q  248 aaaactaaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaa 329  Q
    ||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  23403682 aaaactaaaacatgtaaaaggataactattgtgagaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaa 23403601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 243 - 329
Target Start/End: Original strand, 4623850 - 4623936
Alignment:
Q  243 ggactaaaactaaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaa 329  Q
    |||||||||||||||||| |||||||||||||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||    
T  4623850 ggactaaaactaaaacatgtaaaaggataactattgtgagaagatgacttatatatttcaaaaactgaaaacaaaaactatttcaaa 4623936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 242 - 330
Target Start/End: Complemental strand, 39436931 - 39436843
Alignment:
Q  242 gggactaaaactaaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaaa 330  Q
    |||||||||||||||||||||||||  ||||||||||||| |||||||||||||||||||||||| |||||||||||| ||||||||||    
T  39436931 gggactaaaactaaaacatataaaaaaataactattgtgagaagaggacttgtatatttcaaaaattgaaaacaaaaattatttcaaaa 39436843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 242 - 329
Target Start/End: Complemental strand, 14842398 - 14842311
Alignment:
Q  242 gggactaaaactaaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaa 329  Q
    |||| ||||||||||| || ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  14842398 gggattaaaactaaaatatgtaaaatgataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaattatttcaaa 14842311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 242 - 338
Target Start/End: Original strand, 36470134 - 36470230
Alignment:
Q  242 gggactaaaactaaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaaactg-aaaacaaaaactatttcaaaagaggctct 338  Q
    ||||||||||||||||||| |||||||||||||||||||| |||| |||||||||||||||||||||| |||||||||| |||||| |||||||||||    
T  36470134 gggactaaaactaaaacatgtaaaaggataactattgtgagaagatgacttgtatatttcaaaaactgaaaaacaaaaattatttc-aaagaggctct 36470230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 248 - 340
Target Start/End: Original strand, 23275532 - 23275623
Alignment:
Q  248 aaaactaaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaaagaggctctaa 340  Q
    ||||||||||||| |||||| |||||||  || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  23275532 aaaactaaaacatgtaaaagaataactaccgtaaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttc-aaagaggctctaa 23275623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 242 - 329
Target Start/End: Complemental strand, 21567797 - 21567710
Alignment:
Q  242 gggactaaaactaaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaa 329  Q
    ||||||||||||||||||| ||||| |||||||||||| | ||||||| ||||||||||| |||||||||||||||||||||||||||    
T  21567797 gggactaaaactaaaacatgtaaaaagataactattgtaagaagaggatttgtatatttctaaaactgaaaacaaaaactatttcaaa 21567710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 262 - 329
Target Start/End: Complemental strand, 22798611 - 22798544
Alignment:
Q  262 taaaaggataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaa 329  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  22798611 taaaaggataactattgtgagaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaa 22798544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 243 - 329
Target Start/End: Complemental strand, 16656067 - 16655981
Alignment:
Q  243 ggactaaaactaaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaa 329  Q
    |||||||||||||||||| ||||| |||||||||||||| |||| | ||||||||||| ||||||||||||||||||||||||||||    
T  16656067 ggactaaaactaaaacatgtaaaatgataactattgtgagaagaaggcttgtatattttaaaaactgaaaacaaaaactatttcaaa 16655981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 248 - 329
Target Start/End: Original strand, 3001382 - 3001463
Alignment:
Q  248 aaaactaaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaa 329  Q
    ||||||||||||| ||||| |||||| ||||||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  3001382 aaaactaaaacatgtaaaaagataaccattgtgagaagaggacttgtatatttcaaaaactgaaaataaaaactatttcaaa 3001463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 247 - 340
Target Start/End: Original strand, 29958518 - 29958610
Alignment:
Q  247 taaaactaaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaaagaggctctaa 340  Q
    |||||||||||||| |||||||||||||||||| | |||| |||||||||||||||||||||||||||||||| |||||  |||||||||||||    
T  29958518 taaaactaaaacatgtaaaaggataactattgtaataagatgacttgtatatttcaaaaactgaaaacaaaaattattt-taaagaggctctaa 29958610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 242 - 330
Target Start/End: Original strand, 36046528 - 36046615
Alignment:
Q  242 gggactaaaactaaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaaa 330  Q
    |||| |||||||||||||| ||||||||||||||||||||||||  || ||||||||||||||||||| ||||||||||||||||||||    
T  36046528 gggattaaaactaaaacatgtaaaaggataactattgtgaaaaggagatttgtatatttcaaaaactg-aaacaaaaactatttcaaaa 36046615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 243 - 329
Target Start/End: Complemental strand, 37630091 - 37630005
Alignment:
Q  243 ggactaaaactaaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaa 329  Q
    |||||||||||||||||| ||||||| ||||||||| || |||||| ||| ||||||| ||||||||||||||||||||||||||||    
T  37630091 ggactaaaactaaaacatgtaaaaggctaactattgcgagaagagggcttatatatttaaaaaactgaaaacaaaaactatttcaaa 37630005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 244 - 325
Target Start/End: Complemental strand, 4234266 - 4234185
Alignment:
Q  244 gactaaaactaaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactattt 325  Q
    |||| |||||||||||| ||||||| ||||||||| || |||| ||||||||||||||||||||||||||||||||||||||    
T  4234266 gactcaaactaaaacatgtaaaaggctaactattgcgagaagatgacttgtatatttcaaaaactgaaaacaaaaactattt 4234185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 244 - 325
Target Start/End: Complemental strand, 41787584 - 41787503
Alignment:
Q  244 gactaaaactaaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactattt 325  Q
    ||||||||||||||||| ||||| |||||||||||| | ||||| | || ||||||| ||||||||||||||||||||||||    
T  41787584 gactaaaactaaaacatgtaaaaagataactattgtaagaagagaatttatatattttaaaaactgaaaacaaaaactattt 41787503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 264 - 329
Target Start/End: Original strand, 45310036 - 45310101
Alignment:
Q  264 aaaggataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaa 329  Q
    |||| ||||| ||| ||||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  45310036 aaagaataaccattatgaaaagagaacttgtatatttcaaaaattgaaaacaaaaactatttcaaa 45310101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 291 - 329
Target Start/End: Complemental strand, 4414267 - 4414229
Alignment:
Q  291 ttgtatatttcaaaaactgaaaacaaaaactatttcaaa 329  Q
    |||||||||||||||||||||||||||||||||||||||    
T  4414267 ttgtatatttcaaaaactgaaaacaaaaactatttcaaa 4414229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 77; Significance: 2e-35; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 242 - 330
Target Start/End: Original strand, 2814889 - 2814977
Alignment:
Q  242 gggactaaaactaaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaaa 330  Q
    ||||||||||||||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  2814889 gggactaaaactaaaacatgtaaaatgataactattgtgagaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaaa 2814977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 242 - 325
Target Start/End: Complemental strand, 444611 - 444528
Alignment:
Q  242 gggactaaaactaaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactattt 325  Q
    ||||||||||||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  444611 gggactaaaactaaaacatgtaataggataactattgtgagaagaggacttgtatatttcaaaaactgaaaacaaaaactattt 444528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 242 - 329
Target Start/End: Original strand, 24640351 - 24640438
Alignment:
Q  242 gggactaaaactaaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaa 329  Q
    |||||||||||||||||||||| ||||||||||||| ||| ||||||||||| |||||||||||||||||||||||||||||||||||    
T  24640351 gggactaaaactaaaacatatagaaggataactattatgagaagaggacttgcatatttcaaaaactgaaaacaaaaactatttcaaa 24640438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 242 - 329
Target Start/End: Complemental strand, 1067891 - 1067803
Alignment:
Q  242 gggactaaaactaaaacatataaaa-ggataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaa 329  Q
    ||||||||||||||||||||||||| || |||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||    
T  1067891 gggactaaaactaaaacatataaaaagggtaactattgtgagaagagaacttgtatatttcaaaaactgaaaacaaaaactatttcaaa 1067803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 244 - 329
Target Start/End: Original strand, 6200163 - 6200248
Alignment:
Q  244 gactaaaactaaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaa 329  Q
    |||||||||||||| || |||||||||||||||||||| ||||| | ||||||||||||||||||||||||||||| |||||||||    
T  6200163 gactaaaactaaaatatgtaaaaggataactattgtgagaagagaatttgtatatttcaaaaactgaaaacaaaaaatatttcaaa 6200248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 242 - 329
Target Start/End: Complemental strand, 23774159 - 23774072
Alignment:
Q  242 gggactaaaactaaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaa 329  Q
    |||| ||||||||||||||||||||||||||||||| ||| ||||| |||||||||||||||||| | |||| |||||||||||||||    
T  23774159 gggattaaaactaaaacatataaaaggataactattatgagaagagaacttgtatatttcaaaaattaaaaataaaaactatttcaaa 23774072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 243 - 338
Target Start/End: Original strand, 26393989 - 26394083
Alignment:
Q  243 ggactaaaactaaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaaagaggctct 338  Q
    |||||||||||||||||| ||||| ||||| ||||| || |||| || || ||||||||||||||||||||||||||||||||| |||||||||||    
T  26393989 ggactaaaactaaaacatgtaaaatgataaatattgcgagaagaagatttttatatttcaaaaactgaaaacaaaaactatttc-aaagaggctct 26394083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 244 - 308
Target Start/End: Complemental strand, 34710199 - 34710135
Alignment:
Q  244 gactaaaactaaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaaact 308  Q
    |||||||||||||||||||||||| ||||||| ||||| ||||| ||||||||||||||||||||    
T  34710199 gactaaaactaaaacatataaaagaataactactgtgagaagagaacttgtatatttcaaaaact 34710135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 251 - 313
Target Start/End: Original strand, 2993592 - 2993654
Alignment:
Q  251 actaaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaaactgaaaa 313  Q
    ||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||    
T  2993592 actaaaagatataaaaggataactattgtgagaagagaacttgtatatttcaaaaactaaaaa 2993654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 242 - 292
Target Start/End: Original strand, 4032326 - 4032376
Alignment:
Q  242 gggactaaaactaaaacatataaaaggataactattgtgaaaagaggactt 292  Q
    ||||||||||||||||||||||||| |||||||||||||| |||| |||||    
T  4032326 gggactaaaactaaaacatataaaaagataactattgtgagaagatgactt 4032376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 290 - 329
Target Start/End: Complemental strand, 12324214 - 12324175
Alignment:
Q  290 cttgtatatttcaaaaactgaaaacaaaaactatttcaaa 329  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  12324214 cttgtatatttcaaaaactgaaaacaaaaactacttcaaa 12324175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 76; Significance: 6e-35; HSPs: 14)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 242 - 329
Target Start/End: Complemental strand, 35929797 - 35929710
Alignment:
Q  242 gggactaaaactaaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaa 329  Q
    ||||||||||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||    
T  35929797 gggactaaaactaaaacatataaaatgataactattgtgagaagaggacttatatatttcaaaaactgaaaacaaaaactatttcaaa 35929710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 242 - 329
Target Start/End: Complemental strand, 21555470 - 21555383
Alignment:
Q  242 gggactaaaactaaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaa 329  Q
    ||||||||||||||||||| |||||||||||||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||    
T  21555470 gggactaaaactaaaacatgtaaaaggataactattgtgagaagaagacttatatatttcaaaaactgaaaacaaaaactatttcaaa 21555383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 242 - 329
Target Start/End: Original strand, 36609412 - 36609500
Alignment:
Q  242 gggactaaaactaaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaaactg-aaaacaaaaactatttcaaa 329  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  36609412 gggactaaaactaaaacatgtaaaaggataactattgtgagaagaggatttgtatatttcaaaaactgaaaaacaaaaactatttcaaa 36609500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 249 - 329
Target Start/End: Original strand, 56100144 - 56100224
Alignment:
Q  249 aaactaaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaa 329  Q
    |||||||||||| ||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||    
T  56100144 aaactaaaacatgtaaaaggataactattgcgagaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaa 56100224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 243 - 329
Target Start/End: Complemental strand, 12701127 - 12701041
Alignment:
Q  243 ggactaaaactaaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaa 329  Q
    |||||||||||||||||| |||||| ||||||||||| | |||| ||||||||||||||||||||||||||||||||||||||||||    
T  12701127 ggactaaaactaaaacatgtaaaagaataactattgtaagaagaagacttgtatatttcaaaaactgaaaacaaaaactatttcaaa 12701041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 242 - 329
Target Start/End: Complemental strand, 23249560 - 23249473
Alignment:
Q  242 gggactaaaactaaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaa 329  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||| |||||||||||||||||| ||||||||||| | |||||||    
T  23249560 gggactaaaactaaaacatgtaaaaggataactattgtgagaagagggcttgtatatttcaaaaaccgaaaacaaaaattgtttcaaa 23249473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 244 - 321
Target Start/End: Complemental strand, 827917 - 827840
Alignment:
Q  244 gactaaaactaaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaact 321  Q
    ||||||||||||||||| ||||| |||||||||||||| ||||||||||||||||||||||||| |||||||||||||    
T  827917 gactaaaactaaaacatgtaaaaagataactattgtgagaagaggacttgtatatttcaaaaaccgaaaacaaaaact 827840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 243 - 329
Target Start/End: Original strand, 44243696 - 44243782
Alignment:
Q  243 ggactaaaactaaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaa 329  Q
    ||||||||| ||||||||||||||||||||||||||| | |||| ||||||||||||||||||||| |||||||||  |||||||||    
T  44243696 ggactaaaattaaaacatataaaaggataactattgtaagaagatgacttgtatatttcaaaaactaaaaacaaaatttatttcaaa 44243782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 242 - 329
Target Start/End: Complemental strand, 19598457 - 19598370
Alignment:
Q  242 gggactaaaactaaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaa 329  Q
    ||||||||||||||||||| ||||| || ||||||| ||| || | |||||||||||||| |||||||||||||||||||||||||||    
T  19598457 gggactaaaactaaaacatgtaaaaagaaaactattttgagaaaatgacttgtatatttcgaaaactgaaaacaaaaactatttcaaa 19598370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 244 - 329
Target Start/End: Complemental strand, 35749473 - 35749388
Alignment:
Q  244 gactaaaactaaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaa 329  Q
    ||||||||||||||||||||||| ||||| |||| ||| |||| ||||||||||||||||||| |||||| ||||| |||||||||    
T  35749473 gactaaaactaaaacatataaaaagataattattatgagaagatgacttgtatatttcaaaaattgaaaataaaaattatttcaaa 35749388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 243 - 307
Target Start/End: Complemental strand, 27733465 - 27733401
Alignment:
Q  243 ggactaaaactaaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaaac 307  Q
    |||||||||||||||||| |||||||||||||||||||| |||||| ||||||||||||||||||    
T  27733465 ggactaaaactaaaacatgtaaaaggataactattgtgagaagaggtcttgtatatttcaaaaac 27733401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 248 - 329
Target Start/End: Complemental strand, 41842871 - 41842791
Alignment:
Q  248 aaaactaaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaa 329  Q
    ||||||||||||| |||||| ||||| ||||||| || |||| ||||||||||||||||| |||||||||||||||||||||    
T  41842871 aaaactaaaacatgtaaaag-ataacaattgtgagaaaaggatttgtatatttcaaaaaccgaaaacaaaaactatttcaaa 41842791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 283 - 329
Target Start/End: Original strand, 53584606 - 53584652
Alignment:
Q  283 aagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaa 329  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||    
T  53584606 aagatgacttgtatatttcaaaaactgaaaacaaaaactatttcaaa 53584652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 242 - 281
Target Start/End: Original strand, 53583470 - 53583509
Alignment:
Q  242 gggactaaaactaaaacatataaaaggataactattgtga 281  Q
    ||||||||||||||||||| ||||||||| ||||||||||    
T  53583470 gggactaaaactaaaacatgtaaaaggattactattgtga 53583509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 76; Significance: 6e-35; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 242 - 329
Target Start/End: Complemental strand, 27004539 - 27004452
Alignment:
Q  242 gggactaaaactaaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaa 329  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||    
T  27004539 gggactaaaactaaaacatataaaaggataactattgtgagaagaggacttatatatttcaaaaattgaaaacaaaaactatttcaaa 27004452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 242 - 328
Target Start/End: Original strand, 15070389 - 15070475
Alignment:
Q  242 gggactaaaactaaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaa 328  Q
    ||||||||||| |||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  15070389 gggactaaaacaaaaacatataaaaggataactattgtgagaagaggatttgtatatttcaaaaactgaaaacaaaaactatttcaa 15070475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 245 - 329
Target Start/End: Original strand, 37060081 - 37060165
Alignment:
Q  245 actaaaactaaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaa 329  Q
    |||||||||||||||| |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||    
T  37060081 actaaaactaaaacatgtaaaaggataactattgtgagaagaggatttgtatatttcaaaaactgaaaacaaaaactatttcaaa 37060165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 242 - 329
Target Start/End: Complemental strand, 5959056 - 5958969
Alignment:
Q  242 gggactaaaactaaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaa 329  Q
    ||||||||||||||||||| ||||||||||||||||  || |||||||||||||||||||||||||||||||||||||||||||||||    
T  5959056 gggactaaaactaaaacatgtaaaaggataactattacgagaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaa 5958969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 242 - 326
Target Start/End: Complemental strand, 4382297 - 4382213
Alignment:
Q  242 gggactaaaactaaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttc 326  Q
    ||||||||||||||||||| ||||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  4382297 gggactaaaactaaaacatgtaaaatgataactattgtgagaagagaacttgtatatttcaaaaactgaaaacaaaaactatttc 4382213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 242 - 329
Target Start/End: Complemental strand, 21423455 - 21423368
Alignment:
Q  242 gggactaaaactaaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaa 329  Q
    ||||||||||||||||||| ||| |||||||||||||||| | || ||||||||||||||||||||||||||||||||||||||||||    
T  21423455 gggactaaaactaaaacatgtaataggataactattgtgagatgaagacttgtatatttcaaaaactgaaaacaaaaactatttcaaa 21423368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 243 - 329
Target Start/End: Original strand, 6974517 - 6974603
Alignment:
Q  243 ggactaaaactaaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaa 329  Q
    |||||||||||||||||| ||||| |||||||||||||| ||||| |||| ||||||||||||||||||||||||||||||||||||    
T  6974517 ggactaaaactaaaacatgtaaaatgataactattgtgagaagagcacttatatatttcaaaaactgaaaacaaaaactatttcaaa 6974603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 244 - 329
Target Start/End: Original strand, 5807321 - 5807405
Alignment:
Q  244 gactaaaactaaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaa 329  Q
    |||||||||||||||||||||||||||||||||||||||||| | | ||||||||||||||||||| |||||||||||||||||||    
T  5807321 gactaaaactaaaacatataaaaggataactattgtgaaaagggaatttgtatatttcaaaaactg-aaacaaaaactatttcaaa 5807405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 248 - 329
Target Start/End: Original strand, 30393597 - 30393678
Alignment:
Q  248 aaaactaaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaa 329  Q
    ||||||||||||| |||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  30393597 aaaactaaaacatgtaaaaggataaccattatcaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaa 30393678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 242 - 329
Target Start/End: Original strand, 28107487 - 28107574
Alignment:
Q  242 gggactaaaactaaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaa 329  Q
    |||| |||||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| | |||||||    
T  28107487 gggattaaaactaaaacatgtaaaaggataactattgtgagaagaggatttgtatatttcaaaaactgaaaacaaaaattgtttcaaa 28107574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 243 - 329
Target Start/End: Complemental strand, 13274289 - 13274204
Alignment:
Q  243 ggactaaaactaaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaa 329  Q
    |||||||||||||||||| |||||| ||||||||||||| |||||||||||||||||||||||| | ||||||||||||||||||||    
T  13274289 ggactaaaactaaaacatgtaaaag-ataactattgtgagaagaggacttgtatatttcaaaaattaaaaacaaaaactatttcaaa 13274204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 247 - 329
Target Start/End: Original strand, 24475936 - 24476018
Alignment:
Q  247 taaaactaaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaa 329  Q
    |||||||||||||| ||||| |||||||||||||| |||| || |||||||||||||||||||||||||||||||||||||||    
T  24475936 taaaactaaaacatgtaaaaagataactattgtgataagaagatttgtatatttcaaaaactgaaaacaaaaactatttcaaa 24476018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 243 - 329
Target Start/End: Original strand, 30609686 - 30609772
Alignment:
Q  243 ggactaaaactaaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaa 329  Q
    |||||||||||||||||| ||||| |||||||||||||| |||| |||||||||||||||| |||||||||||||||| ||||||||    
T  30609686 ggactaaaactaaaacatgtaaaatgataactattgtgagaagaagacttgtatatttcaataactgaaaacaaaaacgatttcaaa 30609772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 245 - 329
Target Start/End: Original strand, 10217357 - 10217441
Alignment:
Q  245 actaaaactaaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaa 329  Q
    |||||||||||||||| |||||| ||||||||| | ||||| | ||||||||||||||||||||||||| |||||||||||||||    
T  10217357 actaaaactaaaacatgtaaaagaataactattctaaaaagggaacttgtatatttcaaaaactgaaaataaaaactatttcaaa 10217441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 242 - 329
Target Start/End: Original strand, 37802835 - 37802922
Alignment:
Q  242 gggactaaaactaaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaa 329  Q
    ||||||||||||||||||| ||||| ||||| |||| ||| |||| ||||||||||||||||||| | ||||||||||||||||||||    
T  37802835 gggactaaaactaaaacatgtaaaaagataaatattatgagaagaagacttgtatatttcaaaaatttaaaacaaaaactatttcaaa 37802922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 268 - 329
Target Start/End: Original strand, 37140159 - 37140220
Alignment:
Q  268 gataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaa 329  Q
    ||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||    
T  37140159 gataactattgcgagaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaa 37140220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 242 - 329
Target Start/End: Complemental strand, 14786324 - 14786243
Alignment:
Q  242 gggactaaaactaaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaa 329  Q
    ||||||||||||||||||| ||| |||||||||||||||| ||||||||||||||||||||      |||||||||||||||||||||    
T  14786324 gggactaaaactaaaacatgtaataggataactattgtgagaagaggacttgtatatttca------gaaaacaaaaactatttcaaa 14786243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 251 - 329
Target Start/End: Original strand, 22194291 - 22194369
Alignment:
Q  251 actaaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaa 329  Q
    |||||||||| ||||| |||||||||| | |||| ||||||||||||||||||||||  ||||||||||||||||||||    
T  22194291 actaaaacatgtaaaatgataactattataaaaaaaggacttgtatatttcaaaaaccaaaaacaaaaactatttcaaa 22194369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 249 - 326
Target Start/End: Original strand, 43022888 - 43022964
Alignment:
Q  249 aaactaaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttc 326  Q
    |||||||||||||||||||||||| ||| |||| |||||||||||||||||| ||||||| |||||||||| ||||||    
T  43022888 aaactaaaacatataaaaggataattat-gtgagaagaggacttgtatattttaaaaactaaaaacaaaaattatttc 43022964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 242 - 298
Target Start/End: Original strand, 30757183 - 30757239
Alignment:
Q  242 gggactaaaactaaaacatataaaaggataactattgtgaaaagaggacttgtatat 298  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  30757183 gggactaaaactaaaacatgtaaaaggataactattgtgagaagaggacttgtatat 30757239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 245 - 308
Target Start/End: Complemental strand, 27969574 - 27969511
Alignment:
Q  245 actaaaactaaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaaact 308  Q
    ||||||| ||||||||||||||||||||||||||||| ||| | ||||||||||||||||||||    
T  27969574 actaaaattaaaacatataaaaggataactattgtgagaagtgaacttgtatatttcaaaaact 27969511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 242 - 304
Target Start/End: Original strand, 7747944 - 7748006
Alignment:
Q  242 gggactaaaactaaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaa 304  Q
    ||||||||||||||||||| ||||| ||||||| |||| | ||||||||||||||||||||||    
T  7747944 gggactaaaactaaaacatgtaaaatgataactcttgtaagaagaggacttgtatatttcaaa 7748006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 275 - 323
Target Start/End: Original strand, 27404647 - 27404695
Alignment:
Q  275 attgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactat 323  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||||||    
T  27404647 attgtgagaagaggacttgtatatttcaaaaactaaaaacaaaaactat 27404695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 242 - 308
Target Start/End: Complemental strand, 15431320 - 15431254
Alignment:
Q  242 gggactaaaactaaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaaact 308  Q
    |||| |||||||||||||| ||||||||||||||||  |  |||||||| |||||||||||||||||    
T  15431320 gggattaaaactaaaacatgtaaaaggataactattacgggaagaggacatgtatatttcaaaaact 15431254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 75; Significance: 2e-34; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 243 - 329
Target Start/End: Original strand, 3729333 - 3729419
Alignment:
Q  243 ggactaaaactaaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaa 329  Q
    |||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  3729333 ggactaaaactaaaacatgtaaaaggataattattgtgagaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaa 3729419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 242 - 329
Target Start/End: Original strand, 9793634 - 9793721
Alignment:
Q  242 gggactaaaactaaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaa 329  Q
    ||||||||||||||||||| |||||||||||||||||| ||||| ||| |||||||||||||||||||||||||||||||||||||||    
T  9793634 gggactaaaactaaaacatgtaaaaggataactattgtaaaaaggggatttgtatatttcaaaaactgaaaacaaaaactatttcaaa 9793721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 243 - 329
Target Start/End: Original strand, 8159070 - 8159156
Alignment:
Q  243 ggactaaaactaaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaa 329  Q
    |||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  8159070 ggactaaaactaaaacatgtaaaaggataattattgtgagaagaggacttgtatatttcaaaaattgaaaacaaaaactatttcaaa 8159156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 243 - 329
Target Start/End: Complemental strand, 41929430 - 41929344
Alignment:
Q  243 ggactaaaactaaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaa 329  Q
    |||||||||||||||||| ||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  41929430 ggactaaaactaaaacatgtaaaaggataactattgcgaaaagagaacttgcatatttcaaaaactgaaaacaaaaactatttcaaa 41929344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 244 - 329
Target Start/End: Original strand, 34766885 - 34766970
Alignment:
Q  244 gactaaaactaaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaa 329  Q
    ||||||||||||||||| |||||| ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  34766885 gactaaaactaaaacatgtaaaagaataactattgtgagaagaggacttgtatatttcaaaaattgaaaacaaaaactatttcaaa 34766970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 242 - 329
Target Start/End: Original strand, 9793731 - 9793818
Alignment:
Q  242 gggactaaaactaaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaa 329  Q
    ||||||||||||||||||  |||||||||||||||||| ||||| ||| |||||||||||||||||||||||||||||||||||||||    
T  9793731 gggactaaaactaaaacaagtaaaaggataactattgtaaaaaggggatttgtatatttcaaaaactgaaaacaaaaactatttcaaa 9793818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 243 - 330
Target Start/End: Complemental strand, 21020772 - 21020685
Alignment:
Q  243 ggactaaaactaaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaaa 330  Q
    |||||||||||||| ||||||||||||||||||||| || |||| ||||| |||||||||||||||||||||||||||||||||||||    
T  21020772 ggactaaaactaaatcatataaaaggataactattgcgagaagaagacttatatatttcaaaaactgaaaacaaaaactatttcaaaa 21020685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 242 - 329
Target Start/End: Original strand, 39508315 - 39508402
Alignment:
Q  242 gggactaaaactaaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaa 329  Q
    ||||||||||||||||||| |||||| ||||||||||||| || | ||||||||||||||||||||||||||||||||||||||||||    
T  39508315 gggactaaaactaaaacatgtaaaagaataactattgtgagaaaaagacttgtatatttcaaaaactgaaaacaaaaactatttcaaa 39508402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 243 - 328
Target Start/End: Complemental strand, 21583938 - 21583853
Alignment:
Q  243 ggactaaaactaaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaa 328  Q
    |||||||||||||||||| ||||| |||||||||| ||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  21583938 ggactaaaactaaaacatgtaaaaagataactattatgagaagatgacttgtatatttcaaaaactgaaaacaaaaactatttcaa 21583853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 242 - 329
Target Start/End: Original strand, 20736157 - 20736244
Alignment:
Q  242 gggactaaaactaaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaa 329  Q
    ||||||||||||||||||| ||||| |||||||||||||||| |||||||| ||| ||||||||| ||||||||||||||||||||||    
T  20736157 gggactaaaactaaaacatgtaaaatgataactattgtgaaaggaggacttatatttttcaaaaattgaaaacaaaaactatttcaaa 20736244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 249 - 325
Target Start/End: Complemental strand, 20815753 - 20815677
Alignment:
Q  249 aaactaaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactattt 325  Q
    |||| ||||||||||||| |||||||||||||| || ||||||||||||||| ||||||||||||||||||||||||    
T  20815753 aaacaaaaacatataaaatgataactattgtgagaaaaggacttgtatattttaaaaactgaaaacaaaaactattt 20815677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 254 - 329
Target Start/End: Complemental strand, 25081845 - 25081770
Alignment:
Q  254 aaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaa 329  Q
    ||||||||||||| |||||||||||||| |||| | |||||||||||||||| |||||||||||||||||||||||    
T  25081845 aaaacatataaaatgataactattgtgagaagatggcttgtatatttcaaaacctgaaaacaaaaactatttcaaa 25081770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 254 - 329
Target Start/End: Complemental strand, 25139814 - 25139739
Alignment:
Q  254 aaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaa 329  Q
    ||||||||||||| |||||||||||||| |||| | |||||||||||||||| |||||||||||||||||||||||    
T  25139814 aaaacatataaaatgataactattgtgagaagatggcttgtatatttcaaaacctgaaaacaaaaactatttcaaa 25139739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 247 - 329
Target Start/End: Complemental strand, 9913887 - 9913805
Alignment:
Q  247 taaaactaaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaa 329  Q
    |||||||||||||| ||||| |||||||||| ||| | ||| |||||||||||||||||||| ||||||||||||||||||||    
T  9913887 taaaactaaaacatgtaaaaagataactattatgagatgagaacttgtatatttcaaaaactaaaaacaaaaactatttcaaa 9913805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 244 - 306
Target Start/End: Original strand, 41910219 - 41910281
Alignment:
Q  244 gactaaaactaaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaaa 306  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| |||||    
T  41910219 gactaaaactaaaacatgtaaaatgataactattgtgaaaagaggacttgtatattttaaaaa 41910281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 247 - 329
Target Start/End: Complemental strand, 3711271 - 3711185
Alignment:
Q  247 taaaactaaaacatataaaaggataactattgtgaaaagaggacttgtatat----ttcaaaaactgaaaacaaaaactatttcaaa 329  Q
    |||| ||||||||| ||||| ||||||||||||||||| || ||||||||||    |||||||||||||||||||||||||||||||    
T  3711271 taaatctaaaacatgtaaaaagataactattgtgaaaatagaacttgtatatatatttcaaaaactgaaaacaaaaactatttcaaa 3711185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 243 - 329
Target Start/End: Complemental strand, 2069048 - 2068966
Alignment:
Q  243 ggactaaaactaaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaa 329  Q
    ||||||||||||||||||| |||  ||||| |||||||| |||| |||||  |||||||||||||||||||||||||||||||||||    
T  2069048 ggactaaaactaaaacataaaaa--gataaatattgtgagaagaagactt--atatttcaaaaactgaaaacaaaaactatttcaaa 2068966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 242 - 292
Target Start/End: Original strand, 38451038 - 38451088
Alignment:
Q  242 gggactaaaactaaaacatataaaaggataactattgtgaaaagaggactt 292  Q
    ||||||||||||||||||| |||||||||||||||||||| ||| ||||||    
T  38451038 gggactaaaactaaaacatgtaaaaggataactattgtgagaaggggactt 38451088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 243 - 329
Target Start/End: Original strand, 18503 - 18589
Alignment:
Q  243 ggactaaaactaaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaa 329  Q
    |||||||||||||||||| |||||||||||||||||||| |||| ||||||||||||||||||||| ||| ||||||||||||||||    
T  18503 ggactaaaactaaaacatgtaaaaggataactattgtgagaagatgacttgtatatttcaaaaactaaaaccaaaaactatttcaaa 18589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 66; Significance: 6e-29; HSPs: 8)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 244 - 329
Target Start/End: Original strand, 8163644 - 8163729
Alignment:
Q  244 gactaaaactaaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaa 329  Q
    ||||||||||||||||| ||||| |||||||||||||| ||||| ||||||||||||||||||| |||||||||||||||||||||    
T  8163644 gactaaaactaaaacatgtaaaaagataactattgtgagaagagaacttgtatatttcaaaaacagaaaacaaaaactatttcaaa 8163729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 248 - 329
Target Start/End: Original strand, 35589412 - 35589493
Alignment:
Q  248 aaaactaaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaa 329  Q
    |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  35589412 aaaactaaaatatataaaaggataactattatgaaaagaggacttgtatatttcaaaaatcgaaaacaaaaactatttcaaa 35589493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 242 - 329
Target Start/End: Original strand, 40337065 - 40337152
Alignment:
Q  242 gggactaaaactaaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaa 329  Q
    ||||||||||||||||||| ||||| |||||||||||||| |||| |||||| ||||||| |||||||||||||||||||||||||||    
T  40337065 gggactaaaactaaaacatgtaaaatgataactattgtgagaagatgacttgcatatttcgaaaactgaaaacaaaaactatttcaaa 40337152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 242 - 329
Target Start/End: Complemental strand, 41326131 - 41326044
Alignment:
Q  242 gggactaaaactaaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaa 329  Q
    ||||||||||||||||||| |||||||||||||||||||| |||| || || ||||||||||||||| ||||||||||||||||||||    
T  41326131 gggactaaaactaaaacatgtaaaaggataactattgtgagaagaagatttatatatttcaaaaactcaaaacaaaaactatttcaaa 41326044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 242 - 329
Target Start/End: Complemental strand, 28089224 - 28089136
Alignment:
Q  242 gggactaaaactaaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaaactg-aaaacaaaaactatttcaaa 329  Q
    ||||||||||||||||||| ||||| |||||||||||| | |||| || ||||||||||||||||||| |||||||||| | |||||||    
T  28089224 gggactaaaactaaaacatgtaaaatgataactattgtaagaagatgatttgtatatttcaaaaactgaaaaacaaaaattgtttcaaa 28089136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 244 - 329
Target Start/End: Original strand, 2362383 - 2362468
Alignment:
Q  244 gactaaaactaaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaa 329  Q
    |||||||||||||| |  ||||| |||||||||||||| |||| || |||||||||| |||||||||||||||||| | |||||||    
T  2362383 gactaaaactaaaataagtaaaatgataactattgtgagaagaagatttgtatattttaaaaactgaaaacaaaaattgtttcaaa 2362468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 242 - 298
Target Start/End: Original strand, 43403210 - 43403266
Alignment:
Q  242 gggactaaaactaaaacatataaaaggataactattgtgaaaagaggacttgtatat 298  Q
    |||||||||||||||| || |||||||||||||||| ||| ||||||||||||||||    
T  43403210 gggactaaaactaaaatatgtaaaaggataactattatgataagaggacttgtatat 43403266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 244 - 277
Target Start/End: Complemental strand, 31637802 - 31637769
Alignment:
Q  244 gactaaaactaaaacatataaaaggataactatt 277  Q
    ||||||||||||||||||||||||||||||||||    
T  31637802 gactaaaactaaaacatataaaaggataactatt 31637769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 245 - 329
Target Start/End: Complemental strand, 67959 - 67875
Alignment:
Q  245 actaaaactaaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaa 329  Q
    |||||||||||||||| |||||||||||||||||| | |||||||||||||||||| |||||||||||||||||| |||||||||    
T  67959 actaaaactaaaacatgtaaaaggataactattgttagaagaggacttgtatattttaaaaactgaaaacaaaaattatttcaaa 67875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0532 (Bit Score: 64; Significance: 9e-28; HSPs: 1)
Name: scaffold0532
Description:

Target: scaffold0532; HSP #1
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 242 - 329
Target Start/End: Complemental strand, 11409 - 11322
Alignment:
Q  242 gggactaaaactaaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaa 329  Q
    ||||||||||| ||||||| | |||||||||||| | ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  11409 gggactaaaacaaaaacatgttaaaggataactactctgagaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaa 11322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 242 - 329
Target Start/End: Original strand, 37402 - 37489
Alignment:
Q  242 gggactaaaactaaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaa 329  Q
    |||||||||||||||| || ||||| ||||||||||| || ||||||||||||||||||||||||| ||||||||| |||||||||||    
T  37402 gggactaaaactaaaatatgtaaaatgataactattgcgagaagaggacttgtatatttcaaaaaccgaaaacaaacactatttcaaa 37489  T

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Target: scaffold1248 (Bit Score: 59; Significance: 9e-25; HSPs: 1)
Name: scaffold1248
Description:

Target: scaffold1248; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 243 - 329
Target Start/End: Complemental strand, 1057 - 971
Alignment:
Q  243 ggactaaaactaaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaa 329  Q
    ||||||||||||||||||||||||| |||||||||  || || | ||||||||||||| ||||||||||||||||||||||||||||    
T  1057 ggactaaaactaaaacatataaaagaataactattacgagaaaaagacttgtatattttaaaaactgaaaacaaaaactatttcaaa 971  T

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Target: scaffold0952 (Bit Score: 59; Significance: 9e-25; HSPs: 1)
Name: scaffold0952
Description:

Target: scaffold0952; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 243 - 329
Target Start/End: Original strand, 1256 - 1342
Alignment:
Q  243 ggactaaaactaaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaa 329  Q
    ||||||||||||||||||||||||| |||||||||  || || | ||||||||||||| ||||||||||||||||||||||||||||    
T  1256 ggactaaaactaaaacatataaaagaataactattacgagaaaaagacttgtatattttaaaaactgaaaacaaaaactatttcaaa 1342  T

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Target: scaffold0140 (Bit Score: 56; Significance: 5e-23; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 242 - 329
Target Start/End: Complemental strand, 21566 - 21479
Alignment:
Q  242 gggactaaaactaaaacatataaaaggataactattgtgaaaagaggacttgtatatttcaaaaactgaaaacaaaaactatttcaaa 329  Q
    ||||||||||||||||||| |||||  ||||||||||||| |||| || || |||||||||||||||||||||||||||| |||||||    
T  21566 gggactaaaactaaaacatgtaaaataataactattgtgagaagatgatttatatatttcaaaaactgaaaacaaaaactgtttcaaa 21479  T

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