View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1172_low_37 (Length: 462)

Name: NF1172_low_37
Description: NF1172
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1172_low_37
NF1172_low_37
[»] chr3 (4 HSPs)
chr3 (30-452)||(13797952-13798384)
chr3 (351-424)||(35627074-35627147)
chr3 (142-203)||(8654203-8654264)
chr3 (242-274)||(47843832-47843864)
[»] chr4 (8 HSPs)
chr4 (30-203)||(29290816-29290981)
chr4 (41-205)||(33033908-33034073)
chr4 (30-201)||(13250080-13250251)
chr4 (84-264)||(18823217-18823407)
chr4 (141-205)||(33660264-33660327)
chr4 (30-74)||(33660368-33660412)
chr4 (375-452)||(17179534-17179611)
chr4 (242-274)||(34603852-34603884)
[»] chr6 (3 HSPs)
chr6 (30-205)||(28538685-28538860)
chr6 (242-275)||(15432895-15432928)
chr6 (141-202)||(28841260-28841321)
[»] chr7 (5 HSPs)
chr7 (30-139)||(32796386-32796489)
chr7 (133-263)||(17353934-17354072)
chr7 (30-131)||(17352780-17352882)
chr7 (133-205)||(32795605-32795677)
chr7 (242-282)||(22786104-22786144)
[»] chr1 (4 HSPs)
chr1 (151-205)||(12142164-12142218)
chr1 (141-202)||(2626678-2626739)
chr1 (407-452)||(34948427-34948472)
chr1 (242-282)||(18033798-18033838)
[»] chr5 (4 HSPs)
chr5 (141-202)||(24012423-24012484)
chr5 (366-428)||(39430346-39430408)
chr5 (242-274)||(8849118-8849150)
chr5 (246-274)||(40927363-40927391)
[»] chr2 (2 HSPs)
chr2 (242-280)||(25787552-25787590)
chr2 (370-452)||(26833239-26833321)


Alignment Details
Target: chr3 (Bit Score: 288; Significance: 1e-161; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 288; E-Value: 1e-161
Query Start/End: Original strand, 30 - 452
Target Start/End: Complemental strand, 13798384 - 13797952
Alignment:
Q  30 attggaacaatgaagagtgggtttattgcatttattagcagaaagcannnnnnnggcctcggtaaaatgtgtctaatggagtagaggaattggattaggc 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||       ||||| ||||||||||||||||||||||||||||||||||||||||    
T  13798384 attggaacaatgaagagtgggtttattgcatttattagcagaaagcatttttttggccttggtaaaatgtgtctaatggagtagaggaattggattaggc 13798285  T
Q  130 tacaataatattatgcaattaatgtgtcagatttggtaattgagaggttaagggtataattgacatattacaatct--------aaaaatgacacttaaa 221  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||        ||||||||||||||||    
T  13798284 tacaataatactatgcaattaatgtgtcagatttggtaattgagaggttaaggctataattgacatattataatcttaaactctaaaaatgacacttaaa 13798185  T
Q  222 taggaaca--annnnnnnnagcaaatgtgacaattaaaaaggaacagagagagtatatattaacaataacgaaatcgcatctccggcataagacgtgcca 319  Q
    ||||||    |        | ||||||||||| |||||||||||| ||| |||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  13798184 taggaattttattttttttaacaaatgtgacagttaaaaaggaacggagggagtatatattaacaacaacgaaatcgcatctccgacataagacgtgcca 13798085  T
Q  320 aaagaatgactagagtttacaaacaaattctaaaccgcataacagaaatgactaaccaatgcccaaacaagtaagcgggcatgccaaccaactgtgaacc 419  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  13798084 aaagaatgactagagtttacaaacaaattctaaaccgcatgacagaaatgactaaccaatgcccaaacaagtaagcgggcacgccaaccaactgtgaacc 13797985  T
Q  420 cctaatacatcaacaacattagcctccttcatc 452  Q
    |||||||||| ||||||||||||||||||||||    
T  13797984 cctaatacataaacaacattagcctccttcatc 13797952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 351 - 424
Target Start/End: Complemental strand, 35627147 - 35627074
Alignment:
Q  351 aaaccgcataacagaaatgactaaccaatgcccaaacaagtaagcgggcatgccaaccaactgtgaacccctaa 424  Q
    ||||| || ||||| |||||||||||||| |||||||||| |||||||||||||| |||||| ||||| |||||    
T  35627147 aaaccacagaacagtaatgactaaccaatacccaaacaagcaagcgggcatgccatccaactatgaacacctaa 35627074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 142 - 203
Target Start/End: Complemental strand, 8654264 - 8654203
Alignment:
Q  142 atgcaattaatgtgtcagatttggtaattgagaggttaagggtataattgacatattacaat 203  Q
    ||||||||||| | | || | ||||||||||||| |||||||||||||||| | ||||||||    
T  8654264 atgcaattaatatataagttgtggtaattgagagattaagggtataattgaaaaattacaat 8654203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 242 - 274
Target Start/End: Complemental strand, 47843864 - 47843832
Alignment:
Q  242 aaatgtgacaattaaaaaggaacagagagagta 274  Q
    ||||||||||||||||||||||||||| |||||    
T  47843864 aaatgtgacaattaaaaaggaacagagggagta 47843832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 118; Significance: 5e-60; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 30 - 203
Target Start/End: Complemental strand, 29290981 - 29290816
Alignment:
Q  30 attggaacaatgaagagtgggtttattgcatttattagcagaaagcannnnnnnggcctcggtaaaatgtgtctaatggagtagaggaattggattaggc 129  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||        |||||||||||||||||||||||||||||||||||||||||||||    
T  29290981 attggaacaatgaagagtgggtttattgcatttattagccgaaagcatt------gcctcggtaaaatgtgtctaatggagtagaggaattggattaggc 29290888  T
Q  130 tacaataatattatgcaattaatgtgtcagatttggtaattgagaggttaagggtataattgacatattacaat 203  Q
    |||||||||| ||||||||||  |||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  29290887 tacaataatactatgcaatta--gtgtcagatttggtcattgagaggttaagggtataattgatatattacaat 29290816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 41 - 205
Target Start/End: Original strand, 33033908 - 33034073
Alignment:
Q  41 gaagagtgggtttattgcatttattagcagaaagcannnnnnnggcctcggtaaaa-tgtgtctaatggagtagaggaattggattaggctacaataata 139  Q
    |||||||||||||||||||||||||||||| ||| |       ||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||    
T  33033908 gaagagtgggtttattgcatttattagcagtaagaatttttgtggcctcggtaaaaatgtgtctgatggagtagaggaattggattaggctacaataata 33034007  T
Q  140 ttatgcaattaatgtgtcagatttggtaattgagaggttaagggtataattgacatattacaatct 205  Q
     ||||||||||||||||||||||| |||||||||||| |||| |||||||||||||||||||||||    
T  33034008 ctatgcaattaatgtgtcagatttagtaattgagaggctaagagtataattgacatattacaatct 33034073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 30 - 201
Target Start/End: Original strand, 13250080 - 13250251
Alignment:
Q  30 attggaacaatgaagagtgggtttattgcatttattagcagaaagcannnnnnnggcctcggtaaaa-tgtgtctaatggagtagaggaattggattagg 128  Q
    |||| |||||||||||||||||||||||||||||||||||||||| |        |||||||||||| ||||||| || |||||||||||||||||||||    
T  13250080 attgaaacaatgaagagtgggtttattgcatttattagcagaaagaatttttgtagcctcggtaaaaatgtgtctgatagagtagaggaattggattagg 13250179  T
Q  129 ctacaataatattatgcaattaatgtgtcagatttggtaattgagaggttaagggtataattgacatattaca 201  Q
    ||| ||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  13250180 cta-aataatactatgcaattaatgtgtcagatttagtaattgagaggttaagggtataattgatatattaca 13250251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 84 - 264
Target Start/End: Complemental strand, 18823407 - 18823217
Alignment:
Q  84 ggcctcggtaaaatgtgtctaatggagtagaggaattggattaggctacaataatat--tatgcaattaatgtgtcagatttggtaattgagaggttaag 181  Q
    |||||| ||||||||||||| |||||||||||||||||||||| |||||||||||||  |||||||||||||| ||| |||| ||||||||||||||||     
T  18823407 ggcctcagtaaaatgtgtctgatggagtagaggaattggattacgctacaataatatactatgcaattaatgtatcaaatttagtaattgagaggttaaa 18823308  T
Q  182 ggtataattgacatattacaa--------tctaaaaatgacacttaaataggaacaannnnnnnnagcaaatgtgacaattaaaaaggaac 264  Q
    |||||||||||||||||||||        ||||||| ||||||||||||||||||||        ||||||||||||| ||||||| ||||    
T  18823307 ggtataattgacatattacaatcttaaattctaaaagtgacacttaaataggaacaaatttttttagcaaatgtgacagttaaaaatgaac 18823217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 141 - 205
Target Start/End: Complemental strand, 33660327 - 33660264
Alignment:
Q  141 tatgcaattaatgtgtcagatttggtaattgagaggttaagggtataattgacatattacaatct 205  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||| ||||    
T  33660327 tatgcaattaatgtgtcagatttagtaattgagagg-taagggtataattgacatattaccatct 33660264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 30 - 74
Target Start/End: Complemental strand, 33660412 - 33660368
Alignment:
Q  30 attggaacaatgaagagtgggtttattgcatttattagcagaaag 74  Q
    ||||||||||||||||||| ||||||| |||||||||||||||||    
T  33660412 attggaacaatgaagagtgagtttattacatttattagcagaaag 33660368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 375 - 452
Target Start/End: Complemental strand, 17179611 - 17179534
Alignment:
Q  375 ccaatgcccaaacaagtaagcgggcatgccaaccaactgtgaacccctaatacatcaacaacattagcctccttcatc 452  Q
    ||||||||||||||||  ||||| || | |  |||||||||| ||||||| |||  ||||||||||||| ||||||||    
T  17179611 ccaatgcccaaacaagcgagcggacacggctgccaactgtgaccccctaaaacaaaaacaacattagccgccttcatc 17179534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 242 - 274
Target Start/End: Original strand, 34603852 - 34603884
Alignment:
Q  242 aaatgtgacaattaaaaaggaacagagagagta 274  Q
    ||||||||||||||||||||||||||| |||||    
T  34603852 aaatgtgacaattaaaaaggaacagagggagta 34603884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 88; Significance: 4e-42; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 30 - 205
Target Start/End: Original strand, 28538685 - 28538860
Alignment:
Q  30 attggaacaatgaagagtgggtttattgcatttattagcagaaagcannnnnnnggcctcggtaaaa-tgtgtctaatggagtagaggaattggattagg 128  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| |        | |||| ||||| ||||||| ||||||||||||||||||||||||    
T  28538685 attggaacaatgaagagtgggtttattgcatttattagctgaaagaatttttgtagtctcgataaaaatgtgtctgatggagtagaggaattggattagg 28538784  T
Q  129 ctacaataatattatgcaattaatgtgtcagatttggtaattgagaggttaagggtataattgacatattacaatct 205  Q
    ||| ||| ||| | ||||||  ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||    
T  28538785 cta-aatgatactgtgcaatatatgtgtctgatttagtaattgagaggttaagggtataattgacatattacaatct 28538860  T

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Target: chr6; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 242 - 275
Target Start/End: Original strand, 15432895 - 15432928
Alignment:
Q  242 aaatgtgacaattaaaaaggaacagagagagtat 275  Q
    |||| |||||||||||||||||||||||||||||    
T  15432895 aaatatgacaattaaaaaggaacagagagagtat 15432928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 141 - 202
Target Start/End: Original strand, 28841260 - 28841321
Alignment:
Q  141 tatgcaattaatgtgtcagatttggtaattgagaggttaagggtataattgacatattacaa 202  Q
    |||||||||||||| | | || |||  ||| |||||||||||||||||| ||||||||||||    
T  28841260 tatgcaattaatgtataaaatgtggctatttagaggttaagggtataatagacatattacaa 28841321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 77; Significance: 1e-35; HSPs: 5)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 30 - 139
Target Start/End: Complemental strand, 32796489 - 32796386
Alignment:
Q  30 attggaacaatgaagagtgggtttattgcatttattagcagaaagcannnnnnnggcctcggtaaaatgtgtctaatggagtagaggaattggattaggc 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||        ||||| |||||||||||||||||||||||||||||||||||||||    
T  32796489 attggaacaatgaagagtgggtttattgcatttattagcagaaagcatt------gcctcagtaaaatgtgtctaatggagtagaggaattggattaggc 32796396  T
Q  130 tacaataata 139  Q
    ||||||||||    
T  32796395 tacaataata 32796386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 133 - 263
Target Start/End: Original strand, 17353934 - 17354072
Alignment:
Q  133 aataatattatgcaattaatgtgtcagatttggtaattgagaggttaagggtataattgacatattac--------aatctaaaaatgacacttaaatag 224  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||        | ||||||  ||||||||||||||    
T  17353934 aataatactatgcaattaatgtgtcagatttagtaattgagaggttaagggtataattgacatattaccatcttaaactctaaatgtgacacttaaatag 17354033  T
Q  225 gaacaannnnnnnnagcaaatgtgacaattaaaaaggaa 263  Q
    ||||||        ||||||||||||| |||||||||||    
T  17354034 gaacaattttttttagcaaatgtgacacttaaaaaggaa 17354072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 30 - 131
Target Start/End: Original strand, 17352780 - 17352882
Alignment:
Q  30 attggaacaatgaagagtgggtttattgcatttattagcagaaagcannnnnnnggcctcggt-aaaatgtgtctaatggagtagaggaattggattagg 128  Q
    ||||||||||||||||||||||||||| |||||||||| |||||| |        |||||||| ||||||||||| ||||||||||||||||||||||||    
T  17352780 attggaacaatgaagagtgggtttattacatttattagaagaaagaatttttgtagcctcggtaaaaatgtgtctgatggagtagaggaattggattagg 17352879  T
Q  129 cta 131  Q
    |||    
T  17352880 cta 17352882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 133 - 205
Target Start/End: Complemental strand, 32795677 - 32795605
Alignment:
Q  133 aataatattatgcaattaatgtgtcagatttggtaattgagaggttaagggtataattgacatattacaatct 205  Q
    ||||||| |||||||||||||||||||||||| |||| |||||||||| ||||||||||| ||||||||||||    
T  32795677 aataatactatgcaattaatgtgtcagatttgataatcgagaggttaacggtataattgatatattacaatct 32795605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 242 - 282
Target Start/End: Original strand, 22786104 - 22786144
Alignment:
Q  242 aaatgtgacaattaaaaaggaacagagagagtatatattaa 282  Q
    ||||||||||||||||| ||||||||  |||||||||||||    
T  22786104 aaatgtgacaattaaaagggaacagaaggagtatatattaa 22786144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 151 - 205
Target Start/End: Original strand, 12142164 - 12142218
Alignment:
Q  151 atgtgtcagatttggtaattgagaggttaagggtataattgacatattacaatct 205  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||||| ||||    
T  12142164 atgtgtcagatttagtaattgagacgttaagggtataattgacatattaccatct 12142218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 141 - 202
Target Start/End: Original strand, 2626678 - 2626739
Alignment:
Q  141 tatgcaattaatgtgtcagatttggtaattgagaggttaagggtataattgacatattacaa 202  Q
    |||||||||||||| | | || |||  ||| |||||||||||||||||| ||||||||||||    
T  2626678 tatgcaattaatgtataaaatgtggcgatttagaggttaagggtataatagacatattacaa 2626739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 407 - 452
Target Start/End: Complemental strand, 34948472 - 34948427
Alignment:
Q  407 ccaactgtgaacccctaatacatcaacaacattagcctccttcatc 452  Q
    |||||| ||||||||||| |||| ||||||||||||| ||||||||    
T  34948472 ccaactatgaacccctaaaacataaacaacattagccgccttcatc 34948427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 242 - 282
Target Start/End: Complemental strand, 18033838 - 18033798
Alignment:
Q  242 aaatgtgacaattaaaaaggaacagagagagtatatattaa 282  Q
    ||||||||||||||||||||||| |||  ||||||||||||    
T  18033838 aaatgtgacaattaaaaaggaacggaggtagtatatattaa 18033798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 34; Significance: 0.0000000007; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 141 - 202
Target Start/End: Original strand, 24012423 - 24012484
Alignment:
Q  141 tatgcaattaatgtgtcagatttggtaattgagaggttaagggtataattgacatattacaa 202  Q
    |||||||||||||| | | || ||| |||| |||||||||||||||||| ||||||||||||    
T  24012423 tatgcaattaatgtataaaatgtggcaatttagaggttaagggtataatagacatattacaa 24012484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 366 - 428
Target Start/End: Original strand, 39430346 - 39430408
Alignment:
Q  366 aatgactaaccaatgcccaaacaagtaagcgggcatgccaaccaactgtgaacccctaataca 428  Q
    |||||||||||||| |||| ||||| ||| ||||| |||| |||||| ||||| |||||||||    
T  39430346 aatgactaaccaatacccatacaagcaagtgggcacgccatccaactatgaacacctaataca 39430408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 242 - 274
Target Start/End: Complemental strand, 8849150 - 8849118
Alignment:
Q  242 aaatgtgacaattaaaaaggaacagagagagta 274  Q
    ||||| |||||||||||||||||||||||||||    
T  8849150 aaatgagacaattaaaaaggaacagagagagta 8849118  T

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Target: chr5; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 246 - 274
Target Start/End: Original strand, 40927363 - 40927391
Alignment:
Q  246 gtgacaattaaaaaggaacagagagagta 274  Q
    |||||||||||||||||||||||||||||    
T  40927363 gtgacaattaaaaaggaacagagagagta 40927391  T

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Target: chr2 (Bit Score: 31; Significance: 0.00000004; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 242 - 280
Target Start/End: Original strand, 25787552 - 25787590
Alignment:
Q  242 aaatgtgacaattaaaaaggaacagagagagtatatatt 280  Q
    ||||||||||||||||||||||||||| |||||| ||||    
T  25787552 aaatgtgacaattaaaaaggaacagagggagtatttatt 25787590  T

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Target: chr2; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 452
Target Start/End: Original strand, 26833239 - 26833321
Alignment:
Q  370 actaaccaatgcccaaacaagtaagcgggcatgccaaccaactgtgaacccctaatacatcaacaacattagcctccttcatc 452  Q
    |||||| |||||||||||||   || |||||||| | |||| ||||||| ||||| |||| |||| |||||||| ||||||||    
T  26833239 actaacaaatgcccaaacaatctagagggcatgcaagccaattgtgaacacctaacacataaacatcattagccgccttcatc 26833321  T

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