View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1172_low_59 (Length: 398)
Name: NF1172_low_59
Description: NF1172
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1172_low_59 |
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Alignment Details
Target: chr7 (Bit Score: 201; Significance: 1e-109; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 10 - 264
Target Start/End: Original strand, 10688723 - 10688978
Alignment:
| Q |
10 |
gcataggtacggatacaataccaagtgtaacaaatacaacggtttacagaaattaaggtaagtcaataaaaaa-caagattctatcataaaaag-aaact |
107 |
Q |
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| T |
10688723 |
gcataggtacggatacaataccaagtgtaacaaatacaacggtttaaagaaattaaggtaagtcaataaaaaaacaagattctttcataaaaaggaaact |
10688822 |
T |
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| Q |
108 |
caaatatgcaaataatattggtatcgaacaagtttcacgcatattggtattggaggctagctcttacatttttgtagaaaaaacatcacctgtttttcat |
207 |
Q |
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| T |
10688823 |
caaatatgcaaataatattgatatcgaacaagtttcacgcatattggtataggagactagctcttacatttttgaagaaaaaacatcacctgtttttcat |
10688922 |
T |
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| Q |
208 |
tttcttcaagagcattaatcaggaattaactgtttttcattagcatttgaataaatt |
264 |
Q |
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| T |
10688923 |
tttctt-aagagcattaatcaggcattaactgtttctcattagcatttgaataaatt |
10688978 |
T |
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