View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1172_low_81 (Length: 357)
Name: NF1172_low_81
Description: NF1172
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1172_low_81 |
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Alignment Details
Target: chr7 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 89 - 317
Target Start/End: Complemental strand, 30084119 - 30083891
Alignment:
| Q |
89 |
atgtgccatttgagaaaccgtacgaattgtaaatgtttttagttggtaattagtacgagacgagagaacaacatgcatcatttgtacggtttctaaattg |
188 |
Q |
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| T |
30084119 |
atgtgccatttgagaaaccgtacgaattgtaaatgtttttagttggtaattagtacgagacgagagaacaacatgcatcatttgtacggtttctaaattg |
30084020 |
T |
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| Q |
189 |
cctctttaaatagaatattgagtaaatgagttgaagctttttgtgttgttaattttgggcaagccaatgagagcttttaatttcaattcactggtattat |
288 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30084019 |
cctctttaaatagaatattgagtaaatgagttgaagctttttgtgttgttaattttgggcaagccaatgagagcttttaatttcaattcactggtattat |
30083920 |
T |
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| Q |
289 |
ttttattgttatttttacctgtagattat |
317 |
Q |
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||||||||||||||||||||||||||||| |
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| T |
30083919 |
ttttattgttatttttacctgtagattat |
30083891 |
T |
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