View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1172_low_95 (Length: 325)
Name: NF1172_low_95
Description: NF1172
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1172_low_95 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 191; Significance: 1e-104; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 98 - 325
Target Start/End: Complemental strand, 49085968 - 49085737
Alignment:
| Q |
98 |
tcatcgttattagacataagcatactagttaaaccacagccctaacaagtaagatttaca----cgaggtacaataaaaaattcaaatcaatcactacat |
193 |
Q |
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| T |
49085968 |
tcatcgttattagacataagcatgctagttaaaccacagccctaacaagtaagatttaaataaacgaggtacaataaaaaattcaaatcaatcactacat |
49085869 |
T |
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| Q |
194 |
aataattacaatcctaaatttgtaggagacagtcaatgagtcaatataattaacaaacaagccgacagaaagcactaaaaatgctattaaaaacaatttc |
293 |
Q |
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| T |
49085868 |
aataattacaatcctaaatttgtaggagacagtcaatgagtcaatgtaattaacaaacaagccgacagaaagcactaaaaatgctattaaaaacaatttg |
49085769 |
T |
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| Q |
294 |
atctcactcgacctacactacagttaaccatt |
325 |
Q |
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| T |
49085768 |
atttcactagacctacactacagttaaccatt |
49085737 |
T |
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