View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11731_low_8 (Length: 338)

Name: NF11731_low_8
Description: NF11731
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11731_low_8
NF11731_low_8
[»] chr7 (67 HSPs)
chr7 (15-311)||(39123865-39124161)
chr7 (144-319)||(40463844-40464013)
chr7 (144-319)||(21172007-21172175)
chr7 (145-319)||(42805491-42805662)
chr7 (146-315)||(47716430-47716596)
chr7 (145-319)||(32758228-32758395)
chr7 (145-317)||(43557441-43557611)
chr7 (157-319)||(2541030-2541188)
chr7 (146-319)||(10693073-10693239)
chr7 (145-319)||(27629601-27629770)
chr7 (145-319)||(42798636-42798805)
chr7 (146-319)||(48735122-48735289)
chr7 (147-319)||(11617589-11617756)
chr7 (157-317)||(22698978-22699136)
chr7 (145-318)||(34626207-34626374)
chr7 (145-304)||(42391099-42391251)
chr7 (184-319)||(46354161-46354293)
chr7 (158-312)||(33871922-33872070)
chr7 (145-319)||(19265783-19265949)
chr7 (157-319)||(35334827-35334982)
chr7 (145-319)||(19426889-19427057)
chr7 (145-234)||(27889315-27889402)
chr7 (157-319)||(47077866-47078021)
chr7 (165-319)||(28362164-28362312)
chr7 (145-280)||(7879644-7879774)
chr7 (147-310)||(29907393-29907552)
chr7 (161-319)||(3469190-3469346)
chr7 (157-319)||(14732832-14732990)
chr7 (165-311)||(13805077-13805217)
chr7 (159-280)||(18512466-18512581)
chr7 (235-319)||(42495919-42496003)
chr7 (147-310)||(16341254-16341413)
chr7 (166-319)||(28078152-28078299)
chr7 (158-319)||(42476840-42476994)
chr7 (235-319)||(18327001-18327085)
chr7 (147-300)||(18747472-18747621)
chr7 (146-319)||(23419674-23419841)
chr7 (145-303)||(32233134-32233286)
chr7 (158-233)||(45018935-45019012)
chr7 (166-255)||(38604558-38604641)
chr7 (167-310)||(19266426-19266564)
chr7 (193-317)||(5180202-5180323)
chr7 (242-318)||(7794597-7794673)
chr7 (145-209)||(13792149-13792213)
chr7 (157-233)||(21566485-21566560)
chr7 (144-231)||(31591107-31591192)
chr7 (171-227)||(33500569-33500625)
chr7 (244-319)||(7193052-7193127)
chr7 (176-310)||(14099036-14099165)
chr7 (176-310)||(14409053-14409182)
chr7 (144-255)||(35787267-35787372)
chr7 (146-231)||(23231609-23231692)
chr7 (242-319)||(1424001-1424078)
chr7 (171-311)||(7644931-7645066)
chr7 (147-307)||(11741774-11741927)
chr7 (164-319)||(48123502-48123651)
chr7 (146-309)||(6736867-6737022)
chr7 (157-295)||(38262207-38262340)
chr7 (166-280)||(35203445-35203556)
chr7 (176-209)||(1408529-1408562)
chr7 (144-189)||(25434112-25434157)
chr7 (207-319)||(12473271-12473380)
chr7 (284-319)||(29140493-29140528)
chr7 (158-197)||(42495874-42495913)
chr7 (235-310)||(44123705-44123780)
chr7 (284-316)||(28685267-28685299)
chr7 (145-193)||(36602535-36602583)
[»] chr2 (64 HSPs)
chr2 (146-319)||(10543665-10543835)
chr2 (146-319)||(14530285-14530455)
chr2 (145-316)||(24200622-24200790)
chr2 (144-319)||(8455314-8455484)
chr2 (177-319)||(12023950-12024086)
chr2 (143-319)||(9671147-9671317)
chr2 (145-319)||(25249737-25249905)
chr2 (145-317)||(17896228-17896396)
chr2 (144-319)||(21779259-21779427)
chr2 (142-308)||(5841006-5841169)
chr2 (146-319)||(25079717-25079886)
chr2 (145-310)||(21377073-21377232)
chr2 (158-315)||(7214505-7214659)
chr2 (144-319)||(11514403-11514572)
chr2 (145-315)||(17667973-17668138)
chr2 (145-295)||(14444720-14444864)
chr2 (146-316)||(23397736-23397899)
chr2 (145-295)||(10546153-10546299)
chr2 (146-319)||(14544030-14544201)
chr2 (145-315)||(17623535-17623700)
chr2 (177-315)||(22371028-22371158)
chr2 (145-270)||(36871509-36871627)
chr2 (149-319)||(4516354-4516518)
chr2 (157-319)||(24859999-24860154)
chr2 (145-319)||(27573588-27573756)
chr2 (166-309)||(99285-99421)
chr2 (144-219)||(23488545-23488620)
chr2 (166-308)||(31158459-31158598)
chr2 (144-319)||(39914304-39914474)
chr2 (144-311)||(44643497-44643660)
chr2 (208-310)||(29419945-29420048)
chr2 (158-319)||(19977726-19977882)
chr2 (146-231)||(40762234-40762317)
chr2 (183-308)||(5450263-5450384)
chr2 (146-306)||(17380238-17380391)
chr2 (244-316)||(17705465-17705537)
chr2 (157-301)||(25641487-25641625)
chr2 (165-310)||(33795261-33795401)
chr2 (147-207)||(40579750-40579810)
chr2 (149-309)||(45235820-45235976)
chr2 (158-297)||(19614981-19615116)
chr2 (235-314)||(44604826-44604905)
chr2 (145-231)||(15296405-15296490)
chr2 (157-318)||(26684631-26684789)
chr2 (144-206)||(34080176-34080238)
chr2 (160-206)||(34766330-34766376)
chr2 (159-231)||(24890463-24890533)
chr2 (170-231)||(44449407-44449467)
chr2 (166-226)||(19185763-19185823)
chr2 (158-201)||(8575975-8576018)
chr2 (284-319)||(27466263-27466298)
chr2 (165-227)||(32781307-32781367)
chr2 (148-207)||(41409936-41409995)
chr2 (146-200)||(3633708-3633762)
chr2 (144-194)||(22371199-22371249)
chr2 (146-231)||(25632561-25632644)
chr2 (166-207)||(24059016-24059057)
chr2 (286-319)||(39189556-39189589)
chr2 (184-310)||(23145736-23145857)
chr2 (184-310)||(23557526-23557647)
chr2 (146-311)||(40416871-40417031)
chr2 (157-194)||(124925-124962)
chr2 (145-193)||(760066-760114)
chr2 (145-193)||(23052964-23053012)
[»] chr5 (58 HSPs)
chr5 (144-319)||(38879548-38879720)
chr5 (145-319)||(43334169-43334340)
chr5 (144-319)||(41014286-41014455)
chr5 (144-319)||(4619102-4619274)
chr5 (166-317)||(27328721-27328869)
chr5 (145-319)||(24448857-24449026)
chr5 (145-319)||(8169983-8170150)
chr5 (143-299)||(32703411-32703560)
chr5 (145-319)||(35710280-35710447)
chr5 (145-311)||(19142942-19143102)
chr5 (160-319)||(2838745-2838899)
chr5 (146-226)||(12575660-12575739)
chr5 (146-277)||(13801767-13801895)
chr5 (146-319)||(1565398-1565566)
chr5 (157-319)||(39301091-39301247)
chr5 (144-310)||(208925-209086)
chr5 (146-255)||(7097760-7097863)
chr5 (147-319)||(12006329-12006498)
chr5 (144-209)||(16957386-16957451)
chr5 (166-314)||(22600426-22600569)
chr5 (243-316)||(37024646-37024719)
chr5 (157-217)||(25622524-25622584)
chr5 (157-272)||(43574620-43574730)
chr5 (144-231)||(29334447-29334533)
chr5 (144-315)||(22861667-22861830)
chr5 (147-231)||(20135656-20135740)
chr5 (144-206)||(3771414-3771476)
chr5 (157-271)||(7368413-7368520)
chr5 (145-231)||(12477119-12477204)
chr5 (146-231)||(34154814-34154897)
chr5 (166-219)||(10306494-10306546)
chr5 (149-210)||(21784335-21784396)
chr5 (145-310)||(28516432-28516593)
chr5 (157-231)||(16880658-16880730)
chr5 (157-302)||(1850624-1850763)
chr5 (145-210)||(19093884-19093949)
chr5 (242-319)||(22187252-22187329)
chr5 (242-319)||(23974748-23974824)
chr5 (145-205)||(16028623-16028683)
chr5 (146-205)||(30877564-30877623)
chr5 (143-206)||(39801591-39801654)
chr5 (145-231)||(11657698-11657783)
chr5 (145-202)||(10943844-10943900)
chr5 (168-209)||(21542489-21542530)
chr5 (239-316)||(31299602-31299679)
chr5 (144-197)||(32354211-32354264)
chr5 (194-301)||(22907913-22908014)
chr5 (152-210)||(4654421-4654479)
chr5 (148-197)||(13774949-13774998)
chr5 (145-206)||(24903695-24903756)
chr5 (150-219)||(39079755-39079823)
chr5 (157-231)||(42924841-42924917)
chr5 (259-319)||(10634254-10634313)
chr5 (144-219)||(24313570-24313645)
chr5 (144-219)||(24355907-24355982)
chr5 (157-209)||(30006397-30006449)
chr5 (242-306)||(34074653-34074717)
chr5 (267-319)||(39079882-39079933)
[»] chr8 (57 HSPs)
chr8 (146-319)||(13160669-13160836)
chr8 (144-319)||(39460992-39461164)
chr8 (145-319)||(35261646-35261815)
chr8 (157-319)||(12670261-12670416)
chr8 (157-317)||(21070708-21070868)
chr8 (145-316)||(28817625-28817791)
chr8 (144-319)||(36720763-36720933)
chr8 (157-319)||(7136538-7136697)
chr8 (157-317)||(20284080-20284239)
chr8 (145-319)||(30454096-30454263)
chr8 (145-319)||(6760789-6760960)
chr8 (147-313)||(45071238-45071398)
chr8 (146-319)||(17823543-17823711)
chr8 (144-319)||(44530116-44530286)
chr8 (165-309)||(24365078-24365218)
chr8 (148-319)||(44781506-44781673)
chr8 (157-319)||(18164771-18164927)
chr8 (169-319)||(20869523-20869664)
chr8 (157-319)||(29521696-29521853)
chr8 (144-311)||(26954107-26954272)
chr8 (158-319)||(2626486-2626645)
chr8 (145-315)||(25250493-25250660)
chr8 (144-317)||(12625858-12626027)
chr8 (166-316)||(24245421-24245564)
chr8 (235-319)||(28407383-28407467)
chr8 (145-268)||(20869941-20870061)
chr8 (145-280)||(5135289-5135418)
chr8 (145-315)||(8897763-8897928)
chr8 (147-319)||(42083699-42083866)
chr8 (148-231)||(29877146-29877227)
chr8 (159-231)||(17250888-17250960)
chr8 (157-227)||(16225075-16225145)
chr8 (157-226)||(16013511-16013580)
chr8 (145-202)||(40444845-40444902)
chr8 (176-316)||(11748269-11748406)
chr8 (145-209)||(26102589-26102653)
chr8 (144-304)||(31457155-31457309)
chr8 (157-231)||(5689683-5689755)
chr8 (146-209)||(28407475-28407538)
chr8 (157-206)||(27507985-27508034)
chr8 (190-231)||(43942376-43942417)
chr8 (145-209)||(35107310-35107374)
chr8 (157-231)||(8483949-8484021)
chr8 (187-300)||(23000260-23000365)
chr8 (145-195)||(27468091-27468141)
chr8 (157-231)||(44742529-44742602)
chr8 (159-231)||(19729392-19729462)
chr8 (158-310)||(22598133-22598279)
chr8 (183-307)||(35105902-35106022)
chr8 (157-231)||(26457781-26457851)
chr8 (181-319)||(14018003-14018136)
chr8 (160-213)||(18595906-18595959)
chr8 (242-307)||(30962864-30962929)
chr8 (290-319)||(40605044-40605073)
chr8 (157-280)||(389649-389769)
chr8 (289-317)||(23286431-23286459)
chr8 (147-207)||(36486567-36486627)
[»] chr3 (66 HSPs)
chr3 (144-315)||(13628788-13628957)
chr3 (145-319)||(26869696-26869864)
chr3 (166-319)||(46421055-46421205)
chr3 (143-319)||(29366717-29366890)
chr3 (145-319)||(13730601-13730772)
chr3 (166-319)||(8247707-8247857)
chr3 (145-319)||(40272811-40272980)
chr3 (144-319)||(16735430-16735599)
chr3 (145-319)||(1217079-1217246)
chr3 (147-319)||(22122918-22123083)
chr3 (147-319)||(22609756-22609921)
chr3 (145-309)||(34420642-34420802)
chr3 (145-319)||(5173718-5173889)
chr3 (146-315)||(39203509-39203671)
chr3 (156-317)||(6411832-6411987)
chr3 (145-300)||(516417-516570)
chr3 (148-319)||(26573117-26573282)
chr3 (158-280)||(10795435-10795554)
chr3 (145-319)||(52926218-52926378)
chr3 (166-319)||(9607192-9607342)
chr3 (217-319)||(10870021-10870119)
chr3 (145-310)||(53996564-53996725)
chr3 (157-319)||(7696903-7697053)
chr3 (145-309)||(25944468-25944628)
chr3 (143-319)||(12914032-12914203)
chr3 (146-231)||(45786214-45786299)
chr3 (145-231)||(54484765-54484849)
chr3 (148-231)||(353351-353434)
chr3 (157-272)||(14986993-14987105)
chr3 (145-231)||(34771363-34771447)
chr3 (165-306)||(30928166-30928302)
chr3 (147-297)||(45139479-45139624)
chr3 (145-231)||(49013472-49013558)
chr3 (146-279)||(31592878-31593004)
chr3 (145-231)||(15797294-15797378)
chr3 (143-229)||(25517167-25517251)
chr3 (166-297)||(33926094-33926220)
chr3 (196-318)||(4495714-4495831)
chr3 (177-255)||(47624095-47624167)
chr3 (145-231)||(54374344-54374429)
chr3 (157-226)||(829453-829521)
chr3 (145-209)||(24851300-24851364)
chr3 (157-319)||(45948849-45949008)
chr3 (167-319)||(12525399-12525543)
chr3 (210-319)||(45620890-45620996)
chr3 (144-206)||(30452892-30452954)
chr3 (144-201)||(10484614-10484671)
chr3 (145-210)||(44403554-44403619)
chr3 (150-227)||(55401254-55401330)
chr3 (235-310)||(53062036-53062112)
chr3 (159-305)||(7942993-7943134)
chr3 (144-210)||(40968611-40968677)
chr3 (145-194)||(47624208-47624257)
chr3 (145-206)||(50624952-50625013)
chr3 (287-319)||(25517309-25517341)
chr3 (286-317)||(21875011-21875042)
chr3 (242-317)||(26782357-26782432)
chr3 (144-199)||(45416932-45416986)
chr3 (166-231)||(9276338-9276400)
chr3 (167-209)||(46169988-46170030)
chr3 (143-189)||(54032568-54032614)
chr3 (150-310)||(19731000-19731155)
chr3 (242-319)||(35417906-35417982)
chr3 (235-311)||(9627712-9627788)
chr3 (149-209)||(35417998-35418058)
chr3 (145-189)||(43956471-43956515)
[»] chr6 (38 HSPs)
chr6 (145-319)||(12221913-12222085)
chr6 (145-315)||(29355854-29356022)
chr6 (144-319)||(1354755-1354923)
chr6 (145-319)||(1346931-1347098)
chr6 (145-310)||(9161099-9161260)
chr6 (145-318)||(2166409-2166579)
chr6 (145-318)||(2178042-2178212)
chr6 (157-319)||(3815088-3815245)
chr6 (144-227)||(12885967-12886050)
chr6 (184-317)||(6024202-6024332)
chr6 (145-226)||(12892064-12892145)
chr6 (149-319)||(13904984-13905146)
chr6 (146-231)||(7947371-7947455)
chr6 (242-319)||(8409210-8409287)
chr6 (168-316)||(14553482-14553626)
chr6 (145-208)||(6808468-6808531)
chr6 (144-207)||(23930125-23930188)
chr6 (157-219)||(3116140-3116202)
chr6 (242-319)||(14975171-14975248)
chr6 (148-315)||(15866041-15866201)
chr6 (146-206)||(10734905-10734965)
chr6 (145-209)||(13267797-13267861)
chr6 (146-294)||(17432332-17432483)
chr6 (145-231)||(26097210-26097294)
chr6 (176-319)||(24734600-24734749)
chr6 (258-319)||(33922935-33922996)
chr6 (146-206)||(11395836-11395895)
chr6 (166-209)||(24097649-24097692)
chr6 (145-231)||(25557775-25557859)
chr6 (242-316)||(12063437-12063511)
chr6 (157-219)||(14975101-14975163)
chr6 (242-319)||(20400634-20400711)
chr6 (284-316)||(8417442-8417474)
chr6 (146-310)||(12889402-12889562)
chr6 (284-319)||(19649300-19649335)
chr6 (166-209)||(32579497-32579540)
chr6 (190-231)||(2755466-2755507)
chr6 (146-225)||(383760-383837)
[»] chr1 (73 HSPs)
chr1 (144-319)||(30395724-30395896)
chr1 (145-319)||(18944633-18944805)
chr1 (144-319)||(34725096-34725264)
chr1 (160-311)||(27201645-27201793)
chr1 (145-315)||(46247952-46248117)
chr1 (158-319)||(32632569-32632724)
chr1 (144-319)||(10668210-10668387)
chr1 (144-316)||(20004088-20004257)
chr1 (144-315)||(27474275-27474440)
chr1 (165-319)||(11596504-11596651)
chr1 (145-319)||(38478281-38478448)
chr1 (158-319)||(47214501-47214655)
chr1 (157-316)||(46991797-46991951)
chr1 (157-319)||(18741968-18742129)
chr1 (146-310)||(35117765-35117927)
chr1 (144-319)||(14617028-14617198)
chr1 (160-317)||(23768334-23768486)
chr1 (145-313)||(6925096-6925259)
chr1 (144-293)||(35005139-35005285)
chr1 (157-319)||(45402085-45402243)
chr1 (149-319)||(18724549-18724712)
chr1 (144-311)||(19414437-19414597)
chr1 (142-315)||(41319802-41319970)
chr1 (176-319)||(19932783-19932920)
chr1 (157-319)||(45812548-45812703)
chr1 (144-319)||(9939450-9939624)
chr1 (144-311)||(6983809-6983969)
chr1 (157-319)||(2435797-2435954)
chr1 (146-231)||(4349713-4349796)
chr1 (145-319)||(12126836-12127003)
chr1 (181-319)||(22930104-22930235)
chr1 (157-295)||(35253198-35253329)
chr1 (157-231)||(42304218-42304292)
chr1 (145-219)||(50606488-50606562)
chr1 (145-316)||(8197036-8197202)
chr1 (145-309)||(19701570-19701730)
chr1 (145-311)||(20036218-20036379)
chr1 (148-277)||(22324925-22325049)
chr1 (176-319)||(25290153-25290300)
chr1 (160-310)||(17470361-17470505)
chr1 (195-319)||(33222974-33223093)
chr1 (148-311)||(15511150-15511311)
chr1 (168-309)||(25468285-25468421)
chr1 (157-231)||(31442400-31442473)
chr1 (145-319)||(50811930-50812099)
chr1 (149-231)||(10378738-10378818)
chr1 (145-227)||(15505643-15505722)
chr1 (145-268)||(31382213-31382330)
chr1 (265-319)||(40424732-40424786)
chr1 (165-309)||(44485128-44485267)
chr1 (144-231)||(20999848-20999933)
chr1 (145-209)||(30555210-30555274)
chr1 (145-231)||(1517310-1517394)
chr1 (145-231)||(23796540-23796624)
chr1 (145-231)||(43768214-43768298)
chr1 (144-206)||(33594129-33594191)
chr1 (145-307)||(22327101-22327255)
chr1 (254-319)||(34714613-34714678)
chr1 (157-209)||(4587574-4587626)
chr1 (165-209)||(30682907-30682951)
chr1 (144-231)||(19974072-19974158)
chr1 (209-319)||(4430087-4430194)
chr1 (149-231)||(39214961-39215042)
chr1 (158-219)||(45264411-45264471)
chr1 (242-310)||(2435984-2436052)
chr1 (176-228)||(6358199-6358250)
chr1 (210-310)||(50760288-50760385)
chr1 (145-231)||(35019305-35019388)
chr1 (146-200)||(25554742-25554796)
chr1 (176-204)||(3060003-3060031)
chr1 (145-201)||(16120819-16120875)
chr1 (287-315)||(21723658-21723686)
chr1 (145-193)||(50760239-50760287)
[»] chr4 (87 HSPs)
chr4 (145-319)||(5648226-5648394)
chr4 (147-319)||(6430627-6430793)
chr4 (144-319)||(16911529-16911701)
chr4 (145-319)||(16408600-16408771)
chr4 (145-319)||(30639347-30639515)
chr4 (145-319)||(30352579-30352759)
chr4 (146-313)||(44363130-44363294)
chr4 (145-319)||(48598824-48598991)
chr4 (146-319)||(20224951-20225117)
chr4 (176-319)||(5306694-5306831)
chr4 (145-319)||(23501760-23501925)
chr4 (145-316)||(47528529-47528693)
chr4 (145-319)||(11054147-11054314)
chr4 (145-306)||(54175043-54175201)
chr4 (156-319)||(54730216-54730377)
chr4 (157-313)||(40915802-40915952)
chr4 (157-319)||(21646931-21647090)
chr4 (144-214)||(47482848-47482918)
chr4 (145-269)||(20639657-20639777)
chr4 (145-310)||(35567146-35567306)
chr4 (145-316)||(13256398-13256562)
chr4 (148-294)||(29207900-29208039)
chr4 (166-306)||(17043414-17043549)
chr4 (146-231)||(20225126-20225211)
chr4 (145-308)||(9832312-9832468)
chr4 (157-311)||(19027823-19027972)
chr4 (145-308)||(23580207-23580365)
chr4 (157-319)||(47441541-47441697)
chr4 (145-231)||(20908635-20908720)
chr4 (149-311)||(25343162-25343321)
chr4 (145-219)||(33836486-33836560)
chr4 (242-319)||(14590804-14590881)
chr4 (160-317)||(20405062-20405210)
chr4 (146-308)||(30690176-30690340)
chr4 (144-231)||(51865036-51865121)
chr4 (144-314)||(14983806-14983971)
chr4 (156-319)||(30496332-30496488)
chr4 (147-268)||(7909281-7909397)
chr4 (165-300)||(25463108-25463238)
chr4 (146-208)||(38755908-38755970)
chr4 (145-311)||(47443928-47444093)
chr4 (160-316)||(37494821-37494972)
chr4 (235-319)||(17315382-17315466)
chr4 (146-317)||(55766466-55766632)
chr4 (146-209)||(11394924-11394987)
chr4 (146-209)||(11404651-11404714)
chr4 (145-231)||(25629101-25629185)
chr4 (165-308)||(32478810-32478942)
chr4 (166-307)||(49938613-49938746)
chr4 (147-319)||(8473621-8473788)
chr4 (145-207)||(32484307-32484369)
chr4 (166-319)||(10660371-10660520)
chr4 (166-319)||(10874516-10874665)
chr4 (146-207)||(40553937-40553998)
chr4 (167-231)||(49796849-49796911)
chr4 (159-227)||(21489143-21489210)
chr4 (145-229)||(36816383-36816466)
chr4 (145-209)||(38786681-38786745)
chr4 (157-305)||(39077807-39077948)
chr4 (159-303)||(41018807-41018945)
chr4 (235-319)||(42164232-42164315)
chr4 (148-310)||(487128-487294)
chr4 (145-208)||(50555655-50555718)
chr4 (146-208)||(25388249-25388311)
chr4 (149-210)||(36589815-36589876)
chr4 (166-310)||(39029080-39029220)
chr4 (165-309)||(3580859-3580994)
chr4 (169-303)||(7385499-7385628)
chr4 (157-228)||(16494272-16494343)
chr4 (145-196)||(35532077-35532128)
chr4 (149-319)||(54966989-54967151)
chr4 (170-301)||(32629293-32629418)
chr4 (145-206)||(19027986-19028047)
chr4 (166-219)||(30581485-30581537)
chr4 (166-207)||(44718641-44718682)
chr4 (145-209)||(28494223-28494287)
chr4 (145-231)||(9987833-9987917)
chr4 (265-319)||(5313108-5313162)
chr4 (144-298)||(7038041-7038189)
chr4 (289-319)||(18969708-18969738)
chr4 (166-227)||(2813181-2813242)
chr4 (177-226)||(35894492-35894540)
chr4 (245-310)||(43035224-43035289)
chr4 (242-319)||(54640430-54640506)
chr4 (176-208)||(8820581-8820613)
chr4 (246-310)||(12257688-12257752)
chr4 (259-319)||(50856344-50856403)
[»] scaffold0168 (1 HSPs)
scaffold0168 (145-319)||(30546-30713)
[»] scaffold0258 (1 HSPs)
scaffold0258 (145-319)||(13023-13191)
[»] scaffold0049 (1 HSPs)
scaffold0049 (146-316)||(58947-59114)
[»] scaffold0057 (4 HSPs)
scaffold0057 (145-319)||(46798-46967)
scaffold0057 (160-319)||(24786-24935)
scaffold0057 (144-231)||(43709-43795)
scaffold0057 (166-210)||(46727-46771)
[»] scaffold0311 (1 HSPs)
scaffold0311 (159-316)||(10780-10932)
[»] scaffold0187 (4 HSPs)
scaffold0187 (176-317)||(10080-10214)
scaffold0187 (176-317)||(20408-20542)
scaffold0187 (267-319)||(8912-8964)
scaffold0187 (267-319)||(19240-19292)
[»] scaffold1176 (1 HSPs)
scaffold1176 (158-317)||(1599-1751)
[»] scaffold0223 (1 HSPs)
scaffold0223 (158-319)||(11099-11252)
[»] scaffold0254 (1 HSPs)
scaffold0254 (183-318)||(4125-4258)
[»] scaffold0005 (1 HSPs)
scaffold0005 (242-319)||(226497-226574)
[»] scaffold0015 (1 HSPs)
scaffold0015 (144-231)||(48632-48717)
[»] scaffold0018 (1 HSPs)
scaffold0018 (158-319)||(72879-73029)
[»] scaffold0180 (1 HSPs)
scaffold0180 (157-231)||(24144-24216)
[»] scaffold0031 (1 HSPs)
scaffold0031 (239-318)||(43097-43176)
[»] scaffold0036 (1 HSPs)
scaffold0036 (177-316)||(35048-35184)
[»] scaffold0954 (1 HSPs)
scaffold0954 (146-231)||(3596-3679)
[»] scaffold0024 (1 HSPs)
scaffold0024 (267-319)||(83842-83894)
[»] scaffold0116 (1 HSPs)
scaffold0116 (239-312)||(8865-8938)
[»] scaffold0167 (1 HSPs)
scaffold0167 (165-209)||(23671-23715)


Alignment Details
Target: chr7 (Bit Score: 281; Significance: 1e-157; HSPs: 67)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 15 - 311
Target Start/End: Complemental strand, 39124161 - 39123865
Alignment:
Q  15 ggtactatgtgattcaaaataaggagaaagagacacggtatatttggacttaaaaccagccagctatgagtattgccataatatactgttaactcttcaa 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||    
T  39124161 ggtactatgtgattcaaaataaggagaaagagacacggtatatttggacttaaaaccagcctgccatgagtattgccataatatactgttaactcttcaa 39124062  T
Q  115 gagcataaatacacaacaccacatgggcctaaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggt 214  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39124061 gagcataaatacacaacaccacatgggcctaaaagggcagcttggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggt 39123962  T
Q  215 gtattttacgcagccttccctaccctgtttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttacca 311  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  39123961 gtattttacgcagccttccctaccctgtttttacacaagagaccgtttctaggacttgaacccgtgtcgtttcagtcacatgacaacaactttacca 39123865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 144 - 319
Target Start/End: Complemental strand, 40464013 - 40463844
Alignment:
Q  144 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtt 243  Q
    |||||||||| ||||||||||  |||||||| ||||||||||||||| ||||||||||||||||||  |||||||| |||||||||||    |||| |||    
T  40464013 taaaagggcaactcggtgcactgaagctcccgcatacgcagggtccgagaaggggtcccaccattt--ggtgtattatacgcagcctt----acccagtt 40463920  T
Q  244 tttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    |||||||||||||| ||||||| |||||| ||||||| | || |||||||||||||||||||||||| ||||||||    
T  40463919 tttacacaagagactgtttctatgacttgaacccgtgaccttacagtcacatgacaacaactttaccggttgcgcc 40463844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 144 - 319
Target Start/End: Original strand, 21172007 - 21172175
Alignment:
Q  144 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtt 243  Q
    |||||||||| | |||||||| | ||||||| |||| |||||||||||||||||||||||||||||  |||||||| |||||||||||    ||||||||    
T  21172007 taaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccattt--ggtgtattgtacgcagcctt----accctgtt 21172100  T
Q  244 tttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    || ||||||||| | ||||| |||||||| ||||||| | ||||||| ||||||||||||||||||||||||||||    
T  21172101 tt-acacaagaggctgtttccaggacttgaacccgtgacctttcagttacatgacaacaactttaccagttgcgcc 21172175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 145 - 319
Target Start/End: Complemental strand, 42805662 - 42805491
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-tt 243  Q
    ||||||||| | |||||||| ||||||||| |||| || ||||||||||||||||||||||||| |||||||||| ||| ||||||    ||||||| ||    
T  42805662 aaaagggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacacagcct----taccctgttt 42805567  T
Q  244 tttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    |||||||||||| | ||||| |||||||| ||||||| | || |||||||||||||||||||||||||||| ||||    
T  42805566 tttacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttacgcc 42805491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 146 - 315
Target Start/End: Complemental strand, 47716596 - 47716430
Alignment:
Q  146 aaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-ttt 244  Q
    |||||||| | |||||||||||||||||| |||| || ||||||||||||||||||||||||| |||||||||| ||||||||||    ||||||| |||    
T  47716596 aaagggcaacccggtgcaccaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagcct----taccctgtttt 47716501  T
Q  245 ttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttg 315  Q
    ||||||||||| | ||||| |||||||| ||||||| | || |||||||||| |||||||||| |||||||    
T  47716500 ttacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacatggcaacaacttttccagttg 47716430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 145 - 319
Target Start/End: Complemental strand, 32758395 - 32758228
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttt 244  Q
    ||||||||| | |||||||| | ||||||| |||| |||||||||||||||||||||||||||||  |||||||| ||| |||||||    |||||||||    
T  32758395 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccattt--ggtgtattgtacacagcctt----accctgttt 32758302  T
Q  245 ttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    | ||||||||| | ||||| |||||||| ||| ||| | ||||||||||||||||||||||||||||||||||||    
T  32758301 t-acacaagaggctgtttccaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 32758228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 145 - 317
Target Start/End: Complemental strand, 43557611 - 43557441
Alignment:
Q  145 aaaagggcagctcggtgcaccaaa-gctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-t 242  Q
    ||||||||| | |||||||| ||| |||||| ||||||||| |||||||| |||||||||||||| |||||||||| ||||||||||    ||| ||| |    
T  43557611 aaaagggcaacccggtgcactaaaagctcccgcatacgcagagtccgggagggggtcccaccattattggtgtattgtacgcagcct----tactctgtt 43557516  T
Q  243 ttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcg 317  Q
    ||||||||||||| | ||||| |||||||| |||| || | ||||||||||||||||||||||||||||||||||    
T  43557515 ttttacacaagaggctgtttccaggacttgaacccatgacctttcagtcacatgacaacaactttaccagttgcg 43557441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 157 - 319
Target Start/End: Original strand, 2541030 - 2541188
Alignment:
Q  157 cggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-tttttacacaagag 255  Q
    |||||||| ||||||||| ||||||||||| |||||||||||||||||||  ||||||||||  ||||||||||    ||||||| ||||||||||||||    
T  2541030 cggtgcactaaagctcccgcatacgcagggaccgggaaggggtcccacca--tttggtgtatagtacgcagcct----taccctgttttttacacaagag 2541123  T
Q  256 accgtttctaggacttggacccgtgtcgttt-cagtcacatgacaacaactttaccagttgcgcc 319  Q
     | ||||| |||||||| ||||||| | ||| |||||||||||||||||||||||||||||||||    
T  2541124 gctgtttccaggacttgaacccgtgacctttccagtcacatgacaacaactttaccagttgcgcc 2541188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 146 - 319
Target Start/End: Original strand, 10693073 - 10693239
Alignment:
Q  146 aaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttt 245  Q
    |||||||| | | |||||| | ||||||| |||| ||||||||||||||||||||||||||  ||||||||||| ||||||||||    ||||||  |||    
T  10693073 aaagggcaacccagtgcactagagctcccgcatatgcagggtccgggaaggggtcccacca--tttggtgtattgtacgcagcct----taccct-cttt 10693165  T
Q  246 tacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    |||||||||| | ||||| |||||||| ||||||| | |||||||||||||||||||||||||| |||||||||    
T  10693166 tacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttactagttgcgcc 10693239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 145 - 319
Target Start/End: Complemental strand, 27629770 - 27629601
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttt 244  Q
    ||||||||| | ||||||||  ||||| || |||| |||||| ||||||||||||||||||||||  ||||||||||||||| ||||    |||||||||    
T  27629770 aaaagggcaacccggtgcactgaagctaccgcatatgcagggcccgggaaggggtcccaccattt--ggtgtattttacgcaacctt----accctgttt 27629677  T
Q  245 tt-acacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    || ||||||||| | ||||| |||||||| ||||||| | |||| |||| ||||||||||||||||||||||||||    
T  27629676 tttacacaagaggctgtttccaggacttgaacccgtgacctttcggtcaaatgacaacaactttaccagttgcgcc 27629601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 145 - 319
Target Start/End: Complemental strand, 42798805 - 42798636
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-tt 243  Q
    ||||||||| | || ||||| | ||||||| |||| |||||||||||||| |||||||||||  ||||||||||| ||||||||||    |||| || ||    
T  42798805 aaaagggcaacccgatgcactatagctcccgcatatgcagggtccgggaaagggtcccacca--tttggtgtattgtacgcagcct----taccttgttt 42798712  T
Q  244 tttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    |||||||||||||| ||||| | |||||| ||||||| | || |||||||||||||||||||||||||||||||||    
T  42798711 tttacacaagagactgtttccaagacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgcc 42798636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 146 - 319
Target Start/End: Original strand, 48735122 - 48735289
Alignment:
Q  146 aaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttt 245  Q
    |||||||| | |||||||| | ||||||| |||| ||||||||||||||||||||||||||  ||||||||||| ||||||||||    |||| || |||    
T  48735122 aaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccacca--tttggtgtattgtacgcagcct----taccgtg-ttt 48735214  T
Q  246 tacacaagagaccgttt-ctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    ||||||||||   |||| | |||||||| ||||||| | ||||||||||||||||||||||||||||||||||||    
T  48735215 tacacaagaggttgtttccaaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgcc 48735289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 147 - 319
Target Start/End: Original strand, 11617589 - 11617756
Alignment:
Q  147 aagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttt- 245  Q
    ||||||| | |||||||| |||| |||  |||||||||||||| |||||||||||||||||||  |||||||| ||||||| |||    ||||||||||     
T  11617589 aagggcaacccggtgcactaaaggtcctgcatacgcagggtccaggaaggggtcccaccattt--ggtgtattgtacgcagtctt----accctgttttt 11617682  T
Q  246 tacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    ||||||||||   ||||| |||||||| ||| ||| | ||||||||||||||||||||||||||||||||||||    
T  11617683 tacacaagaggttgtttccaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 11617756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 157 - 317
Target Start/End: Original strand, 22698978 - 22699136
Alignment:
Q  157 cggtgcaccaaagctccctcatacgcagggtccgggaag-gggtcccaccatttttggtgtattttacgcagccttccctaccctgtttt-tacacaaga 254  Q
    |||||||| | ||||||| ||||| |||||||||||||  |||||||||||||||||||||||| ||||||| |||    |||||||||| |||||||||    
T  22698978 cggtgcactatagctcccgcatacacagggtccgggaaaagggtcccaccatttttggtgtattgtacgcagtctt----accctgttttttacacaaga 22699073  T
Q  255 gaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcg 317  Q
    |||  |||| |||||||| |||| |  | ||||||||||||||||||||||||||||||||||    
T  22699074 gactatttccaggacttgaacccataacctttcagtcacatgacaacaactttaccagttgcg 22699136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 145 - 318
Target Start/End: Original strand, 34626207 - 34626374
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttt 244  Q
    ||||||||| | || || || ||||||||| |||||||||||||||||||||| |||||||||||  ||||||||  ||||||||||    |||||||||    
T  34626207 aaaagggcaacccgatgaactaaagctcccgcatacgcagggtccgggaagggatcccaccattt--ggtgtattgaacgcagcctt----accctgttt 34626300  T
Q  245 ttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgc 318  Q
    ||||||| ||| | ||||| |||||||| | | ||| | ||||| |||||||||||||||||||||||||||||    
T  34626301 ttacacaggaggctgtttccaggacttgaatctgtggcctttcaatcacatgacaacaactttaccagttgcgc 34626374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 145 - 304
Target Start/End: Original strand, 42391099 - 42391251
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttt 244  Q
    ||||||||| | |||||||| | ||||||| |||| ||||||||||||||||||||||||||  ||||||||||| ||||||||||    ||||||| ||    
T  42391099 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccacca--tttggtgtattgtacgcagcct----taccctg-tt 42391191  T
Q  245 ttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaac 304  Q
    ||||||||||  | ||||| |||||||| ||||||| | |||||||||||||||||||||    
T  42391192 ttacacaagaagctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaac 42391251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 184 - 319
Target Start/End: Complemental strand, 46354293 - 46354161
Alignment:
Q  184 gggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttttt-acacaagagaccgtttctaggacttggacccgtgtc 282  Q
    ||||||||||||||||||||||||| |||||||||| |||||||||||    ||||||||||| |||||||||   ||||| |||||||| ||||||| |    
T  46354293 gggtccgggaaggggtcccaccattattggtgtattgtacgcagcctt----accctgttttttacacaagaggttgtttccaggacttgaacccgtgac 46354198  T
Q  283 gtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
     || || ||||||||||||||||||||||||||||||    
T  46354197 cttccaatcacatgacaacaactttaccagttgcgcc 46354161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 158 - 312
Target Start/End: Original strand, 33871922 - 33872070
Alignment:
Q  158 ggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttttacacaagagac 257  Q
    ||||||| ||||||| | ||||| ||||||| ||||||||||||||||||||  |||||||| |||||||||||    | ||||||||||||||||||      
T  33871922 ggtgcactaaagctctcgcatacacagggtctgggaaggggtcccaccattt--ggtgtattgtacgcagcctt----atcctgtttttacacaagaggt 33872015  T
Q  258 cgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccag 312  Q
     ||||| |||||||| ||||| | | |||||||||||||||||||||||||||||    
T  33872016 tgtttccaggacttgaacccgcgacctttcagtcacatgacaacaactttaccag 33872070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 145 - 319
Target Start/End: Complemental strand, 19265949 - 19265783
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttt 244  Q
    ||||||||||| |||||||| ||||||||| |||| | ||| |||||||||||||||||||||||  |||||||| |||||||||||    ||||| |||    
T  19265949 aaaagggcagcccggtgcactaaagctcccacatatgtagg-tccgggaaggggtcccaccattt--ggtgtattgtacgcagcctt----accctcttt 19265857  T
Q  245 ttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    ||||||||| | | || || | |||||| ||||||| | |||||||||| |||||||||||||||| ||||||||    
T  19265856 ttacacaagcggctgtatccaagacttgaacccgtgacctttcagtcacgtgacaacaactttacc-gttgcgcc 19265783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 157 - 319
Target Start/End: Original strand, 35334827 - 35334982
Alignment:
Q  157 cggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttttacacaagaga 256  Q
    |||||||| ||||||||  |||||||||||||||||||||||||||||||||   |||||||| ||| ||| |||    |||||||||||  ||| ||||    
T  35334827 cggtgcactaaagctcctgcatacgcagggtccgggaaggggtcccaccattc--ggtgtattgtacacagtctt----accctgtttttt-acacgaga 35334919  T
Q  257 ccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    | ||||| |||||||| || |||| | || |||||||||||||||||||||||||||||||||    
T  35334920 ctgtttccaggacttgaactcgtgaccttccagtcacatgacaacaactttaccagttgcgcc 35334982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 145 - 319
Target Start/End: Original strand, 19426889 - 19427057
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttt 244  Q
    ||||||||| | ||||||||  |||||| | |||| |||||||||| |||||| |||||||||||  |||||||| ||||||| |||    ||||| |||    
T  19426889 aaaagggcaacccggtgcactgaagctctcgcatatgcagggtccgagaaggg-tcccaccattt--ggtgtattgtacgcagtctt----accctattt 19426981  T
Q  245 t-tacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    | |||||||||| | ||||| |||||||| ||||||| | |||| |||||||||||||||||||||||||||||||    
T  19426982 tttacacaagaggctgtttccaggacttgaacccgtgacctttcggtcacatgacaacaactttaccagttgcgcc 19427057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 145 - 234
Target Start/End: Original strand, 27889315 - 27889402
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccc 234  Q
    ||||||||| | ||||| |||||||||||| |||||||||||||||||||||||||||||||  ||||||||||| ||||||||||||||    
T  27889315 aaaagggcaacccggtgtaccaaagctcccgcatacgcagggtccgggaaggggtcccacca--tttggtgtattgtacgcagccttccc 27889402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 157 - 319
Target Start/End: Original strand, 47077866 - 47078021
Alignment:
Q  157 cggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttttacacaagaga 256  Q
    |||||||| | ||||||| |||| | |||||  |||||||||||||||||||||  ||||||| |||||| | ||    || || |||| ||||||||||    
T  47077866 cggtgcactagagctcccgcatatgtagggtttgggaaggggtcccaccatttt--gtgtattgtacgcaacttt----actctatttt-acacaagaga 47077958  T
Q  257 ccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    | ||||| |||||||| ||||||| | ||||||||||||||||||||||||||||||||||||    
T  47077959 ctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgcc 47078021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 165 - 319
Target Start/End: Original strand, 28362164 - 28362312
Alignment:
Q  165 caaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttttacacaagagaccgtttct 264  Q
    |||||||||| |||| ||| |||| ||||||||||||||||||||  |||||||| ||||||||||| || |     |||||||||||||| | ||||||    
T  28362164 caaagctcccacatatgcaaggtctgggaaggggtcccaccattt--ggtgtattgtacgcagccttaccaagt---tttttacacaagaggcagtttct 28362258  T
Q  265 aggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    |||||||| ||| ||| | |||||| |||||||||||||||||||| ||||||||    
T  28362259 aggacttgaacctgtgacctttcagccacatgacaacaactttacc-gttgcgcc 28362312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 145 - 280
Target Start/End: Complemental strand, 7879774 - 7879644
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-tt 243  Q
    ||||||||| | ||||||||  |||||||| |||||||||||||||||||||||||||||||  ||||||||||| ||||||||||    |||| || ||    
T  7879774 aaaagggcaacccggtgcactgaagctcccgcatacgcagggtccgggaaggggtcccacca--tttggtgtattgtacgcagcct----taccttgttt 7879681  T
Q  244 tttacacaagagaccgtttctaggacttggacccgtg 280  Q
    |||||||||||||  ||||| |||||||| |||||||    
T  7879680 tttacacaagagattgtttccaggacttgaacccgtg 7879644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 147 - 310
Target Start/End: Complemental strand, 29907552 - 29907393
Alignment:
Q  147 aagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttttt 246  Q
    ||||||| | |||||||| ||||||||| |||||  ||||||||||| |||||||||||||||| ||||||||  |||||||||| |  ||  | |||||    
T  29907552 aagggcaacccggtgcactaaagctcccgcatac--agggtccgggatggggtcccaccatttt-ggtgtattgaacgcagccttac--actat-ttttt 29907459  T
Q  247 acacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatg--acaacaactttacc 310  Q
    ||||||||| | |||||||||||||| ||||||| | |||||||||||||  ||||||||||||||    
T  29907458 acacaagaggctgtttctaggacttgaacccgtgacctttcagtcacatgatacaacaactttacc 29907393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 161 - 319
Target Start/End: Original strand, 3469190 - 3469346
Alignment:
Q  161 gcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg---tttttacacaagagac 257  Q
    |||| ||||||||| ||||| |||||||  |||||||||||| |||||||||||||||| ||||||     || |||||||   |||||||||||||||     
T  3469190 gcactaaagctcccgcatacacagggtctaggaaggggtcccgccatttttggtgtattgtacgca----accgtaccctgttttttttacacaagagaa 3469285  T
Q  258 cgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
     ||||||||||||||   | ||| | ||||||||||||||||||||||||||| ||||||||    
T  3469286 tgtttctaggacttgagtctgtgacctttcagtcacatgacaacaactttacc-gttgcgcc 3469346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 157 - 319
Target Start/End: Original strand, 14732832 - 14732990
Alignment:
Q  157 cggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttttt-acacaagag 255  Q
    |||||||| ||||||||| ||||  |||||| |||||||| ||  ||||||||||||||||||  ||||||||||    ||||||||||| |||   |||    
T  14732832 cggtgcactaaagctcccgcataaacagggttcgggaaggagtttcaccatttttggtgtattg-acgcagcctt----accctgttttttacatgggag 14732926  T
Q  256 accgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
     | ||||| |||||||| |||| || | ||||||||||||||||||||||||||||||||||||    
T  14732927 gctgtttccaggacttgaacccatgacttttcagtcacatgacaacaactttaccagttgcgcc 14732990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 165 - 311
Target Start/End: Complemental strand, 13805217 - 13805077
Alignment:
Q  165 caaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttttacacaagagaccgtttct 264  Q
    |||||||||| |||||||||||||| ||||| |||||||||||||  |||||||| ||| ||||||| ||   |||||||| |||| |||| |  ||||     
T  13805217 caaagctcccgcatacgcagggtccaggaagtggtcccaccattt--ggtgtattgtacacagccttacc---cctgtttt-acaccagaggctatttcc 13805124  T
Q  265 aggacttggacccgtgtcgtttcagtcacatgacaacaactttacca 311  Q
    |||||||| ||||||  | ||||||||||||||||||||||||||||    
T  13805123 aggacttgaacccgttacctttcagtcacatgacaacaactttacca 13805077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 159 - 280
Target Start/End: Original strand, 18512466 - 18512581
Alignment:
Q  159 gtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttttacacaagagacc 258  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||  || |||||||| ||||||||||    |||||| |||||||||||||        
T  18512466 gtgcaccaaagctcccgcatacgcagggtccgggaaggggtcccacca--ttcggtgtattgtacgcagcct----taccctatttttacacaagatgtt 18512559  T
Q  259 gtttctaggacttggacccgtg 280  Q
    ||||| |||||||| |||||||    
T  18512560 gtttccaggacttgaacccgtg 18512581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 235 - 319
Target Start/End: Original strand, 42495919 - 42496003
Alignment:
Q  235 taccctgtttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    ||||||||||||| ||||||| | ||||| |||||||| ||||||| | ||||||||| ||||||||||||||||||||||||||    
T  42495919 taccctgtttttatacaagaggctgtttccaggacttgaacccgtgacctttcagtcatatgacaacaactttaccagttgcgcc 42496003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 147 - 310
Target Start/End: Complemental strand, 16341413 - 16341254
Alignment:
Q  147 aagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-tttt 245  Q
    ||||||||| |||||||||||||||||| |||| |   ||||||||||| || ||||||| |||||||||||| |||| |||||    ||||||| ||||    
T  16341413 aagggcagcccggtgcaccaaagctcccgcatatgataggtccgggaagagggcccacca-ttttggtgtattgtacgtagcct----taccctgttttt 16341319  T
Q  246 tacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttacc 310  Q
    |||||||||| | |||||||| ||||| ||||||| | |||||   |||||| ||||||||||||    
T  16341318 tacacaagaggctgtttctagaacttgaacccgtgacctttcaaatacatgataacaactttacc 16341254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 166 - 319
Target Start/End: Original strand, 28078152 - 28078299
Alignment:
Q  166 aaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttttacacaagagaccgtttcta 265  Q
    ||||||| | |||| ||||| | |||||||||||||||||||||  ||||||||  | ||| ||||    |||||||||||  ||| ||||| |||||||    
T  28078152 aaagctctcgcatatgcaggattcgggaaggggtcccaccattt--ggtgtattgcatgcaacctt----accctgtttttttacacgagactgtttcta 28078245  T
Q  266 ggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    ||||||| ||||||| | || |||||||||||||||||||| || |||||||||    
T  28078246 ggacttgaacccgtgaccttacagtcacatgacaacaacttcacgagttgcgcc 28078299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 158 - 319
Target Start/End: Complemental strand, 42476994 - 42476840
Alignment:
Q  158 ggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttttacacaagagac 257  Q
    ||||||| | ||||||| |||| |||| | |  ||||||||||||||||  ||||||||||| ||||||||||    |||| || |||||||||||||||    
T  42476994 ggtgcactagagctcccgcatatgcagagcctaggaaggggtcccacca--tttggtgtattgtacgcagcct----taccttg-ttttacacaagagac 42476902  T
Q  258 cgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
     ||||| || ||||| | ||||| | ||| ||||||||||||||||||||||||||| ||||    
T  42476901 tgtttccagaacttgaatccgtgaccttttagtcacatgacaacaactttaccagttacgcc 42476840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 235 - 319
Target Start/End: Complemental strand, 18327085 - 18327001
Alignment:
Q  235 taccctgtttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    ||||||||||||||||||||| | |||||  ||||||| ||||||| | ||  ||||||||||||||||||||||||||||||||    
T  18327085 taccctgtttttacacaagaggctgtttccgggacttgaacccgtgaccttcaagtcacatgacaacaactttaccagttgcgcc 18327001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 147 - 300
Target Start/End: Complemental strand, 18747621 - 18747472
Alignment:
Q  147 aagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg--ttt 244  Q
    ||||||||| |||||||| ||||||||| |||||||||||| | |||||||||||||||| ||  |||||||| |||||||||||    ||||||  |||    
T  18747621 aagggcagcccggtgcactaaagctcccgcatacgcagggttcaggaaggggtcccaccaatt--ggtgtattatacgcagcctt----accctgctttt 18747528  T
Q  245 ttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaa 300  Q
    |||||||| || | ||||| | ||||||  |||||| | |||||||||| ||||||    
T  18747527 ttacacaaaaggctgtttccaagacttgatcccgtgacctttcagtcacgtgacaa 18747472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 146 - 319
Target Start/End: Original strand, 23419674 - 23419841
Alignment:
Q  146 aaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttt 245  Q
    |||||||||| || ||||| ||||| ||| || ||||| ||||  |||||||||||||||||||  |||||||| ||||||| |||    ||||||||||    
T  23419674 aaagggcagcccgatgcactaaagcccccgcacacgcaaggtctaggaaggggtcccaccattt--ggtgtattgtacgcagtctt----accctgtttt 23419767  T
Q  246 -tacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
     |||||||||| | ||||| || ||||| ||| ||| | ||| |||||||||||| |||||||||| ||||||||    
T  23419768 ttacacaagaggctgtttccagaacttgaacctgtgaccttttagtcacatgacagcaactttacc-gttgcgcc 23419841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 145 - 303
Target Start/End: Original strand, 32233134 - 32233286
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttt 244  Q
    ||||||||||| ||||||||  ||||||||||||| |||||||  |||||||  ||||||||  ||||||||| | ||||| ||||    ||||||||||    
T  32233134 aaaagggcagcccggtgcactgaagctccctcatatgcagggtttgggaaggaatcccacca--tttggtgtaatatacgctgcct----taccctgttt 32233227  T
Q  245 ttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaa 303  Q
    |||||||||||   ||||| |||||||| |||| || | |||||||||  |||||||||    
T  32233228 ttacacaagaggttgtttccaggacttgaacccatgacctttcagtcaggtgacaacaa 32233286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 158 - 233
Target Start/End: Original strand, 45018935 - 45019012
Alignment:
Q  158 ggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccacca--tttttggtgtattttacgcagccttcc 233  Q
    ||||||| ||||||||| |||||||||||||||||||||||| ||||||  |||||||| |||| |||||||||||||    
T  45018935 ggtgcactaaagctcccgcatacgcagggtccgggaaggggttccaccagttttttggtatattgtacgcagccttcc 45019012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 166 - 255
Target Start/End: Complemental strand, 38604641 - 38604558
Alignment:
Q  166 aaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttttacacaagag 255  Q
    ||||||||| |||||||||||||||| |||||||| |||||  ||||||||||| ||||||||||    |||||||||||||||||||||    
T  38604641 aaagctcccgcatacgcagggtccggaaaggggtctcacca--tttggtgtattgtacgcagcct----taccctgtttttacacaagag 38604558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 167 - 310
Target Start/End: Complemental strand, 19266564 - 19266426
Alignment:
Q  167 aagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-tttttacacaagagaccgtttcta 265  Q
    |||||||| |||||||||||||||||||||| |||||| |  ||||||||||| ||||||||||    ||||||| ||||||| |||| | |  |||  |    
T  19266564 aagctcccgcatacgcagggtccgggaagggatcccacaa--tttggtgtattgtacgcagcct----taccctgttttttacgcaagtggctattttca 19266471  T
Q  266 ggacttggacccgtgtcgtttcagtcacatgacaacaactttacc 310  Q
    ||||||| ||||  | | |||||||||||||||||||||||||||    
T  19266470 ggacttgaacccacgacctttcagtcacatgacaacaactttacc 19266426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 193 - 317
Target Start/End: Original strand, 5180202 - 5180323
Alignment:
Q  193 aaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttttt-acacaagagaccgtttctaggacttggacccgtgtcgtttcagtc 291  Q
    ||||||||| | |||||||||||| || ||| ||| |||    ||||||||||| ||||||||| | ||||| || | ||| |||| || | ||||||||    
T  5180202 aaggggtccaatcatttttggtgtgttgtacacagtctt----accctgtttttgacacaagaggctgtttccagaagttgaacccttgacctttcagtc 5180297  T
Q  292 acatgacaacaactttaccagttgcg 317  Q
    ||||||||||||||||||||||||||    
T  5180298 acatgacaacaactttaccagttgcg 5180323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 242 - 318
Target Start/End: Original strand, 7794597 - 7794673
Alignment:
Q  242 tttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgc 318  Q
    |||||||| ||||| | ||||| |||||||| ||||||| | || ||||||||| ||||||||||||||||||||||    
T  7794597 tttttacataagaggctgtttccaggacttgaacccgtgaccttccagtcacataacaacaactttaccagttgcgc 7794673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 145 - 209
Target Start/End: Original strand, 13792149 - 13792213
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccattt 209  Q
    |||||||||||||||||||| ||||||||  |||||||||||| || ||||||||||| ||||||    
T  13792149 aaaagggcagctcggtgcacaaaagctccagcatacgcagggttcgagaaggggtcccgccattt 13792213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 157 - 233
Target Start/End: Complemental strand, 21566560 - 21566485
Alignment:
Q  157 cggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttcc 233  Q
    |||||||| ||||||||| |||| ||||||| ||||||||||||| |||| |||||||||||| ||||||| |||||    
T  21566560 cggtgcactaaagctcccgcatatgcagggttcgggaaggggtcctacca-ttttggtgtattgtacgcagtcttcc 21566485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 144 - 231
Target Start/End: Original strand, 31591107 - 31591192
Alignment:
Q  144 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt 231  Q
    |||||||||| | |||||||| | ||||||| |||| ||| ||||||||||||||||||||||||| |  |||||| |||||||||||    
T  31591107 taaaagggcaacccggtgcactagagctcccgcatatgcaaggtccgggaaggggtcccaccatttat--tgtattgtacgcagcctt 31591192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 171 - 227
Target Start/End: Complemental strand, 33500625 - 33500569
Alignment:
Q  171 tccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcag 227  Q
    |||| |||||||||||||||||||||||||||||||||||| ||||||  |||||||    
T  33500625 tcccgcatacgcagggtccgggaaggggtcccaccattttttgtgtatagtacgcag 33500569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 244 - 319
Target Start/End: Complemental strand, 7193127 - 7193052
Alignment:
Q  244 tttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    ||||||||||||   ||||| |||||||| ||||||| | |||||||||||||||||||||||||| |||| ||||    
T  7193127 tttacacaagaggttgtttcgaggacttgaacccgtgacctttcagtcacatgacaacaactttacaagttacgcc 7193052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 176 - 310
Target Start/End: Original strand, 14099036 - 14099165
Alignment:
Q  176 catacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-tttttacacaagagaccgtttctaggacttgga 274  Q
    |||||| ||||| ||||||||||||||||||  ||||||||||| ||||||| ||    || |||| ||||||||||| || |  |||| |||||||  |    
T  14099036 catacgtagggttcgggaaggggtcccacca--tttggtgtattgtacgcagtct----taacctgttttttacacaaaaggctatttccaggacttcaa 14099129  T
Q  275 cccgtgtcgtttcagtcacatgacaacaactttacc 310  Q
    ||| || | |||||||||||||||||||||||||||    
T  14099130 cccatgacctttcagtcacatgacaacaactttacc 14099165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 176 - 310
Target Start/End: Original strand, 14409053 - 14409182
Alignment:
Q  176 catacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-tttttacacaagagaccgtttctaggacttgga 274  Q
    |||||| ||||| ||||||||||||||||||  ||||||||||| ||||||| ||    || |||| ||||||||||| || |  |||| |||||||  |    
T  14409053 catacgtagggttcgggaaggggtcccacca--tttggtgtattgtacgcagtct----taacctgttttttacacaaaaggctatttccaggacttcaa 14409146  T
Q  275 cccgtgtcgtttcagtcacatgacaacaactttacc 310  Q
    ||| || | |||||||||||||||||||||||||||    
T  14409147 cccatgacctttcagtcacatgacaacaactttacc 14409182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 144 - 255
Target Start/End: Original strand, 35787267 - 35787372
Alignment:
Q  144 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtt 243  Q
    |||||||||| | |||||||   |||||||| |||||||| |||||||||||||||||| |||  ||||||||||| |||||| |||    |||| ||||    
T  35787267 taaaagggcaacccggtgcattgaagctcccgcatacgcaaggtccgggaaggggtcccgcca--tttggtgtattgtacgcaacct----taccatgtt 35787360  T
Q  244 tttacacaagag 255  Q
    ||||||||||||    
T  35787361 tttacacaagag 35787372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 146 - 231
Target Start/End: Complemental strand, 23231692 - 23231609
Alignment:
Q  146 aaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt 231  Q
    |||||| | |||||||||| |||||| || |||||||||||| ||||||||||||||| ||  || |||||||| |||||||||||    
T  23231692 aaagggaaactcggtgcactaaagctgccgcatacgcagggttcgggaaggggtcccatca--ttcggtgtattatacgcagcctt 23231609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 242 - 319
Target Start/End: Original strand, 1424001 - 1424078
Alignment:
Q  242 tttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    ||||||||||| |||| ||||| |||| ||| | ||||| | || ||||||||| |||||||||||||||||||||||    
T  1424001 tttttacacaacagactgtttccaggatttgaatccgtgaccttccagtcacataacaacaactttaccagttgcgcc 1424078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 171 - 311
Target Start/End: Complemental strand, 7645066 - 7644931
Alignment:
Q  171 tccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttttt-acacaagagaccgtttctaggac 269  Q
    |||| ||||||||||||| || |||||||||||| ||||| |||||||| |||||   |||    ||||||||||| ||||||||| | ||||| |||||    
T  7645066 tcccgcatacgcagggtcagg-aaggggtcccacaatttt-ggtgtattgtacgctatctt----accctgttttttacacaagaggctgtttccaggac 7644973  T
Q  270 ttggacccgtgtcgtttcagtcacatgacaacaactttacca 311  Q
    ||| ||||||| | |||||||||| | ||||||| |||||||    
T  7644972 ttgaacccgtgacctttcagtcacgttacaacaaatttacca 7644931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 147 - 307
Target Start/End: Complemental strand, 11741927 - 11741774
Alignment:
Q  147 aagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttttt 246  Q
    ||||||| | |||||||| | ||||||| |||  ||||  ||||||||||| ||||||||  ||||||||||| ||||||||||    ||||||  ||||    
T  11741927 aagggcaacccggtgcactagagctcccgcatgtgcagaatccgggaagggatcccacca--tttggtgtattgtacgcagcct----taccct-atttt 11741835  T
Q  247 acacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttt 307  Q
    |||| |||  | ||||  |||||||| |||| || | ||||||||||||||||||||||||    
T  11741834 acactagaagctgttttcaggacttgaacccatgacctttcagtcacatgacaacaacttt 11741774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 164 - 319
Target Start/End: Original strand, 48123502 - 48123651
Alignment:
Q  164 ccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtt-tttacacaagagaccgttt 262  Q
    ||||| ||||| |||| ||| ||||| | |||||||||||||||||  |||||||| || ||||  ||    |||||||| |||||||||||| | ||||    
T  48123502 ccaaacctcccgcatatgcatggtccagaaaggggtcccaccattt--ggtgtattgtatgcagtttt----accctgttatttacacaagaggctgttt 48123595  T
Q  263 ctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    | |||||||| |||| || | |||||| ||||||| |||||||||||| ||||||||    
T  48123596 ccaggacttgaacccatgacctttcagacacatgataacaactttacc-gttgcgcc 48123651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 146 - 309
Target Start/End: Complemental strand, 6737022 - 6736867
Alignment:
Q  146 aaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttt 245  Q
    |||||||||| |||||||| |||| ||| || |||||| |||||||||| || ||| |||||||  |||||||| || |||| ||| |||    ||||||    
T  6737022 aaagggcagcccggtgcac-aaaggtccttcgtacgcaaggtccgggaaaggctcc-accattt--ggtgtattgtatgcagtcttacct----tgtttt 6736931  T
Q  246 tacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttac 309  Q
    || |||||||   ||||  |||||||| ||||||| | |||||||| |||||||||||||||||    
T  6736930 tatacaagaggttgttttgaggacttgaacccgtgacctttcagtcgcatgacaacaactttac 6736867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 157 - 295
Target Start/End: Original strand, 38262207 - 38262340
Alignment:
Q  157 cggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt-ccctaccctgtttttacacaagag 255  Q
    |||||||| ||||||||| ||||||||| || ||||||||||||||| ||  ||||||||||| || ||| | || || ||     ||||||||||||||    
T  38262207 cggtgcactaaagctcccgcatacgcagtgttcgggaaggggtcccatca--tttggtgtattgtatgcaacattaccata----ttttttacacaagag 38262300  T
Q  256 accgtttctaggacttggacccgtgtcgtttcagtcacat 295  Q
    || ||||| |||||||| ||||||| | || |||||||||    
T  38262301 actgtttccaggacttgaacccgtgaccttccagtcacat 38262340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 166 - 280
Target Start/End: Complemental strand, 35203556 - 35203445
Alignment:
Q  166 aaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-tttttacacaagagaccgtttct 264  Q
    ||||||||| |||||| || || | ||||||| |||||||||||||||| |||| ||||||| ||    || |||| |||||||||||||||  |||||     
T  35203556 aaagctcccgcatacgtagagttcaggaagggatcccaccatttttggtatattgtacgcagtct----tatcctgttttttacacaagagaatgtttcc 35203461  T
Q  265 aggacttggacccgtg 280  Q
    |||||||| |||||||    
T  35203460 aggacttgaacccgtg 35203445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 176 - 209
Target Start/End: Complemental strand, 1408562 - 1408529
Alignment:
Q  176 catacgcagggtccgggaaggggtcccaccattt 209  Q
    ||||||||||||||||||||||||||||||||||    
T  1408562 catacgcagggtccgggaaggggtcccaccattt 1408529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 144 - 189
Target Start/End: Complemental strand, 25434157 - 25434112
Alignment:
Q  144 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtcc 189  Q
    ||||||| ||||||||||||| ||||||||| ||||||||||||||    
T  25434157 taaaaggacagctcggtgcactaaagctcccgcatacgcagggtcc 25434112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 319
Target Start/End: Complemental strand, 12473380 - 12473271
Alignment:
Q  207 tttttggtgtattttacgcagccttccctaccctgttttt-acacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaact 305  Q
    ||||||||||||| |||||| ||||    ||||||||||| |||||||||   ||||  |||||||| |||| || | ||||||  ||||||||||||||    
T  12473380 tttttggtgtattgtacgcatcctt----accctgtttttgacacaagaggttgtttgcaggacttgaacccatgacctttcagatacatgacaacaact 12473285  T
Q  306 ttaccagttgcgcc 319  Q
    ||||| ||||||||    
T  12473284 ttaccggttgcgcc 12473271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 284 - 319
Target Start/End: Original strand, 29140493 - 29140528
Alignment:
Q  284 tttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    ||||||| ||||||||||||||||||||||||||||    
T  29140493 tttcagttacatgacaacaactttaccagttgcgcc 29140528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 197
Target Start/End: Original strand, 42495874 - 42495913
Alignment:
Q  158 ggtgcaccaaagctccctcatacgcagggtccgggaaggg 197  Q
    ||||||| ||||||||| ||||||||||||||||||||||    
T  42495874 ggtgcactaaagctcccgcatacgcagggtccgggaaggg 42495913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 235 - 310
Target Start/End: Original strand, 44123705 - 44123780
Alignment:
Q  235 taccctgtttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttacc 310  Q
    |||| |||||||||||||||| | ||||| || ||||| ||||||    |||||||||||||||| ||||||||||    
T  44123705 taccttgtttttacacaagaggctgtttccagtacttgaacccgtaatctttcagtcacatgacaccaactttacc 44123780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 316
Target Start/End: Original strand, 28685267 - 28685299
Alignment:
Q  284 tttcagtcacatgacaacaactttaccagttgc 316  Q
    ||||||||||||||||||||||||| |||||||    
T  28685267 tttcagtcacatgacaacaactttaacagttgc 28685299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 193
Target Start/End: Complemental strand, 36602583 - 36602535
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccggga 193  Q
    ||||||||| | |||||||| ||||||||| ||||||||||||| ||||    
T  36602583 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtctggga 36602535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 106; Significance: 5e-53; HSPs: 64)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 146 - 319
Target Start/End: Complemental strand, 10543835 - 10543665
Alignment:
Q  146 aaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-ttt 244  Q
    |||||||| | |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||    ||||||| |||    
T  10543835 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttttggtgtattgtacgcagcct----taccctgtttt 10543740  T
Q  245 ttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    ||||||||||| ||||||| |||||||| ||||||| | ||||||||||||||||||||||||| ||||||||||    
T  10543739 ttacacaagaggccgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttatcagttgcgcc 10543665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 146 - 319
Target Start/End: Complemental strand, 14530455 - 14530285
Alignment:
Q  146 aaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-ttt 244  Q
    |||||||| | |||||||| ||||||||| ||||||||||||||||||||||||||||||||| |||||||||| |||| |||||    ||||||| |||    
T  14530455 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgtagcct----taccctgtttt 14530360  T
Q  245 ttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    ||| ||||||| | ||||| |||||||| ||||||| | ||||||||||||||||||||||||||||||||||||    
T  14530359 ttatacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgcc 14530285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 145 - 316
Target Start/End: Original strand, 24200622 - 24200790
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-tt 243  Q
    ||||||||| | |||||||| ||||||| | ||||| |||||||||||||||| ||||||||||||||||||||| ||||||||||    ||||||| ||    
T  24200622 aaaagggcaacccggtgcactaaagctctcacatactcagggtccgggaagggttcccaccatttttggtgtattgtacgcagcct----taccctgttt 24200717  T
Q  244 tttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgc 316  Q
    |||||||||||| | ||||| |||||||| ||||||| | |||||||||||||||||||||||||||||||||    
T  24200718 tttacacaagaggctgtttccaggacttgaacccgtgacttttcagtcacatgacaacaactttaccagttgc 24200790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 144 - 319
Target Start/End: Original strand, 8455314 - 8455484
Alignment:
Q  144 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgt- 242  Q
    |||||||||| | |||||||| ||||||||  ||||||||||||||||||||||||||||||||||  |||||||| |||||||||||    |||||||     
T  8455314 taaaagggcaacccggtgcactaaagctccggcatacgcagggtccgggaaggggtcccaccattt--ggtgtattgtacgcagcctt----accctgtg 8455407  T
Q  243 ttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    ||||||||||||| | ||||| |||||||| ||||||| | || |||||||||||||||||||||||||||||||||    
T  8455408 ttttacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgcc 8455484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 177 - 319
Target Start/End: Original strand, 12023950 - 12024086
Alignment:
Q  177 atacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttttacacaagagaccgtttctaggacttggacc 276  Q
    ||||||||||||||||| |||||||||||||||  |||||||| |||||||||||    |||||||||||||||||||| | ||||| |||||||| |||    
T  12023950 atacgcagggtccgggagggggtcccaccattt--ggtgtattgtacgcagcctt----accctgtttttacacaagaggctgtttccaggacttgaacc 12024043  T
Q  277 cgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    |||| | ||||||||||||||||||||||||||||||||||||    
T  12024044 cgtgacctttcagtcacatgacaacaactttaccagttgcgcc 12024086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 143 - 319
Target Start/End: Complemental strand, 9671317 - 9671147
Alignment:
Q  143 ctaaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgt 242  Q
    ||||||||||| | |||||||| ||||||||| |||||||||||||||||||||||||||||||  ||||||||||| ||||||||||    |||||||     
T  9671317 ctaaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccacca--tttggtgtattgtacgcagcct----taccctg- 9671225  T
Q  243 ttttacacaagagaccgtttctaggacttggacccgtgtcgttt-cagtcacatgacaacaactttaccagttgcgcc 319  Q
    ||||||||||||| | ||||| |||| ||| ||||||| | ||| |||||||||||||||||||||||| ||||||||    
T  9671224 ttttacacaagaggctgtttccaggatttgaacccgtgacatttccagtcacatgacaacaactttaccggttgcgcc 9671147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 145 - 319
Target Start/End: Original strand, 25249737 - 25249905
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttt 244  Q
    ||||||||| | |||||||| ||||||| | |||||||||||| ||||||||| |||||||||||  |||||||| |||||||||||    |||||||||    
T  25249737 aaaagggcaacccggtgcactaaagctcacgcatacgcagggttcgggaagggatcccaccattt--ggtgtattgtacgcagcctt----accctgttt 25249830  T
Q  245 ttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
     |||||||||||| ||||| | |||||| ||||||| | || ||||||||||||||||||||||||| |||||||    
T  25249831 gtacacaagagactgtttccatgacttgaacccgtgaccttacagtcacatgacaacaactttaccaattgcgcc 25249905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 145 - 317
Target Start/End: Complemental strand, 17896396 - 17896228
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt-ccctaccctgtt 243  Q
    ||||||||| |||| ||||| ||||||||| ||||||||||||||| |||||||||||||||  |||||| |||| ||||||||||| |||||   | ||    
T  17896396 aaaagggcaactcgatgcactaaagctcccacatacgcagggtccgagaaggggtcccacca--tttggtatattgtacgcagccttacccta---tttt 17896302  T
Q  244 tttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcg 317  Q
    ||||||||||||   |||||||||||||| | ||||| | |||| |||||||||||||||||||||||||||||    
T  17896301 tttacacaagaggttgtttctaggacttgaatccgtgacctttcggtcacatgacaacaactttaccagttgcg 17896228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 144 - 319
Target Start/End: Original strand, 21779259 - 21779427
Alignment:
Q  144 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtt 243  Q
    |||||||||| | |||||||| | ||||||| |||| |||||||||||||||||||||||||||||  |||||||| |||||| ||||    ||||||||    
T  21779259 taaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccattt--ggtgtattgtacgcaacctt----accctgtt 21779352  T
Q  244 tttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    || ||||||||| | || || |||||||| ||||||| | ||||||||||||||||||||||| ||||||||||||    
T  21779353 tt-acacaagaggctgtctccaggacttgaacccgtgacctttcagtcacatgacaacaacttcaccagttgcgcc 21779427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 142 - 308
Target Start/End: Complemental strand, 5841169 - 5841006
Alignment:
Q  142 cctaaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt-ccctaccct 240  Q
    |||||||||||| |||||||||| ||||||||| |||| || ||||||||||||||||||||||||| ||| |||||| |||||| |||| |||||        
T  5841169 cctaaaagggcaactcggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattgatgtattgtacgcatccttacccta---- 5841074  T
Q  241 gtttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 308  Q
     ||||||||||| || | |||||||||||||| ||||||| | || ||||||||||||||||||||||    
T  5841073 ttttttacacaaaaggctgtttctaggacttgaacccgtgaccttccagtcacatgacaacaacttta 5841006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 146 - 319
Target Start/End: Original strand, 25079717 - 25079886
Alignment:
Q  146 aaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttt 245  Q
    |||||||| | |||||||| |||||||   |||||||||||||||||||||||||||||||  || |||||||| |||||| |||| |||    | ||||    
T  25079717 aaagggcaacccggtgcactaaagctcttgcatacgcagggtccgggaaggggtcccacca--ttcggtgtattgtacgcatccttacct--tgtttttt 25079812  T
Q  246 tacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    ||||||||||   ||||||| |||||| ||||||| | || |||||||||||||||||||||||||||||||||    
T  25079813 tacacaagaggttgtttctaagacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgcc 25079886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 145 - 310
Target Start/End: Original strand, 21377073 - 21377232
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-tt 243  Q
    |||||||||||||||||||| ||||||||| |||||||||||| ||||||||||||||||||  ||||||| ||| ||| ||||||    ||||||| ||    
T  21377073 aaaagggcagctcggtgcac-aaagctcccacatacgcagggttcgggaaggggtcccacca--tttggtgcattgtacccagcct----taccctgttt 21377165  T
Q  244 tttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttacc 310  Q
    ||||||||||||   ||||||| |||||| || |||  | |||||||||||||||||||||||||||    
T  21377166 tttacacaagaggatgtttctatgacttgaactcgtaacctttcagtcacatgacaacaactttacc 21377232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 158 - 315
Target Start/End: Complemental strand, 7214659 - 7214505
Alignment:
Q  158 ggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgt-ttttacacaagaga 256  Q
    ||||||| ||| ||| | ||||||||| ||||| |||||| || |||||||||| ||||||| |||||||||||    ||||||| ||||||||||||||    
T  7214659 ggtgcactaaaactctcgcatacgcagtgtccgagaagggatctcaccattttttgtgtattgtacgcagcctt----accctgtattttacacaagaga 7214564  T
Q  257 ccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttg 315  Q
    | ||||| | |||||| |||| || | ||||||||||||||||||||||||||||||||    
T  7214563 ctgtttccaagacttgaacccatgacctttcagtcacatgacaacaactttaccagttg 7214505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 144 - 319
Target Start/End: Complemental strand, 11514572 - 11514403
Alignment:
Q  144 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtt 243  Q
    ||||||||||   |||||||| ||||||||| ||||||||||||| |||||||| |||||||||||  |||||||| ||||||||||| | |    ||||    
T  11514572 taaaagggcaatccggtgcactaaagctcccgcatacgcagggtctgggaaggg-tcccaccattt--ggtgtattgtacgcagccttactt----tgtt 11514480  T
Q  244 ttt-acacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    ||| ||||||||| | ||||| |||| ||| ||||||| | || |||||||||||||||||||||||||||||||||    
T  11514479 ttttacacaagaggctgtttccaggagttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgcc 11514403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 145 - 315
Target Start/End: Complemental strand, 17668138 - 17667973
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-tt 243  Q
    ||||||||| | |||||||| |||||||||  ||||||||||| || |||||||| |||||||||  |||||||| |||||||||||    |||||| ||    
T  17668138 aaaagggcaacccggtgcactaaagctcccatatacgcagggttcgagaaggggttccaccattt--ggtgtattgtacgcagcctt----accctgatt 17668045  T
Q  244 tttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttg 315  Q
    ||||||||||||    |||| |||||||| ||||||| | || |||||||||||||||||||||||||||||    
T  17668044 tttacacaagaggttctttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttg 17667973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 145 - 295
Target Start/End: Complemental strand, 14444864 - 14444720
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttt 244  Q
    ||||||||| |  ||||||| ||||||||| |||||||||||||||||||||||||||||||  ||||||||||  ||| ||||||    ||||||||||    
T  14444864 aaaagggcaacctggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccacca--tttggtgtatcgtacacagcct----taccctgttt 14444771  T
Q  245 ttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacat 295  Q
    ||||||||||| | ||||| |||||||| ||||||| | || |||||||||    
T  14444770 ttacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacat 14444720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 146 - 316
Target Start/End: Complemental strand, 23397899 - 23397736
Alignment:
Q  146 aaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttt 245  Q
    |||||||| | |||||||| | ||||||| |||| | |||||||| |||||||||||||||  ||||||||||| |||| |||||    ||||||  |||    
T  23397899 aaagggcaacccggtgcactagagctcccgcatatgtagggtccgagaaggggtcccacca--tttggtgtattgtacgtagcct----taccct-attt 23397807  T
Q  246 tacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgc 316  Q
    |||||||||| | ||||| |||||||| |||| || | |||||||||||||||||||||||||||||||||    
T  23397806 tacacaagaggctgtttccaggacttgaacccatgacctttcagtcacatgacaacaactttaccagttgc 23397736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 145 - 295
Target Start/End: Complemental strand, 10546299 - 10546153
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg--t 242  Q
    ||||||||| | |||||||| ||||||||| |||||||||||||||||||||||||||||||  ||||||||||| ||||||||||    |||||||  |    
T  10546299 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccacca--tttggtgtattgtacgcagcct----taccctgttt 10546206  T
Q  243 ttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacat 295  Q
    ||||| |||||||   ||||| |||||||| ||||||| | ||||||||||||    
T  10546205 ttttatacaagaggatgtttccaggacttgaacccgtgacctttcagtcacat 10546153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 146 - 319
Target Start/End: Complemental strand, 14544201 - 14544030
Alignment:
Q  146 aaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttt 245  Q
    |||||||| || ||||||| ||||||||| |||||||||||||| ||||||||||| ||||||||| |  ||||  |||||| ||    |||||||||||    
T  14544201 aaagggcaacttggtgcactaaagctcccgcatacgcagggtcccggaaggggtccgaccattttttggttattgcacgcagtct----taccctgtttt 14544106  T
Q  246 --tacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
      |||||||||| | ||||| || || |||||| ||  | |||||||||||||||||||||||||||| |||||||    
T  14544105 tctacacaagaggctgtttccagtacctggacctgtaacctttcagtcacatgacaacaactttaccaattgcgcc 14544030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 145 - 315
Target Start/End: Complemental strand, 17623700 - 17623535
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-tt 243  Q
    ||||||||| | | |||||| |||||| || |||||||||| | ||||||||||| |||||||||  |||||||| |||||||||||    |||||| ||    
T  17623700 aaaagggcaacccagtgcactaaagcttccacatacgcaggattcgggaaggggttccaccattt--ggtgtattgtacgcagcctt----accctgatt 17623607  T
Q  244 tttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttg 315  Q
    ||||||||||||   ||||| |||||||| ||||||| | || ||||| |||||||||||||||||||||||    
T  17623606 tttacacaagaggttgtttcgaggacttgaacccgtgaccttccagtcgcatgacaacaactttaccagttg 17623535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 177 - 315
Target Start/End: Complemental strand, 22371158 - 22371028
Alignment:
Q  177 atacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttttacacaagagaccgtttctaggacttggacc 276  Q
    |||| ||||||||||||||||||||||||||||  |||||||| |||||||||||    |||||||||||||||  ||| | ||||| |||||||| |||    
T  22371158 atacacagggtccgggaaggggtcccaccattt--ggtgtattgtacgcagcctt----accctgtttttacac--gaggctgtttccaggacttgaacc 22371067  T
Q  277 cgtgtcgtttcagtcacatgacaacaactttaccagttg 315  Q
    |||| | |  |||||||||||||||||||||||||||||    
T  22371066 cgtgacctcccagtcacatgacaacaactttaccagttg 22371028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 145 - 270
Target Start/End: Complemental strand, 36871627 - 36871509
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttt 244  Q
    ||||||||| | |||||||| ||||||||| |||||||||| ||||||||||||||||||||  ||||||||||| ||||||||||    ||||||||||    
T  36871627 aaaagggcaacccggtgcactaaagctcccgcatacgcagg-tccgggaaggggtcccacca--tttggtgtattgtacgcagcct----taccctgttt 36871535  T
Q  245 ttacacaagagaccgtttctaggact 270  Q
    | ||||||||| | ||||| ||||||    
T  36871534 tcacacaagaggctgtttccaggact 36871509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 149 - 319
Target Start/End: Original strand, 4516354 - 4516518
Alignment:
Q  149 gggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-ttttta 247  Q
    ||||||| |||| ||| |||||| || |||||||||||||||||||||||||||||||   |||||||||| |||||||| |    | ||||| ||||||    
T  4516354 gggcagcccggtacactaaagcttccacatacgcagggtccgggaaggggtcccacca--attggtgtattgtacgcagcgt----tgccctgtttttta 4516447  T
Q  248 cacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    |||||||| | |||||||| ||||| |   ||| | |||||||||| |||||||||||||||| ||||||||    
T  4516448 cacaagaggctgtttctagaacttgaatatgtgacctttcagtcacgtgacaacaactttacc-gttgcgcc 4516518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 157 - 319
Target Start/End: Original strand, 24859999 - 24860154
Alignment:
Q  157 cggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttttacacaagaga 256  Q
    |||||||| ||||||||| ||||||||||||||| |||||||| | |||||||  |||||||| ||||||||||     ||| ||||||||||| ||||     
T  24859999 cggtgcactaaagctcccgcatacgcagggtccgagaaggggttctaccattt--ggtgtattgtacgcagcct-----accatgtttttacaccagagg 24860091  T
Q  257 ccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
      ||||| ||| |||  ||||||  | || ||||||||||||||||| |||||||||||||||    
T  24860092 ttgtttccagggcttaaacccgtaaccttccagtcacatgacaacaattttaccagttgcgcc 24860154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 145 - 319
Target Start/End: Complemental strand, 27573756 - 27573588
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttt 244  Q
    ||||||||| | || ||||| ||||||||| ||||| ||||||  |||||  ||| |||||||||  |||||||| |||||||||||    ||| |||||    
T  27573756 aaaagggcaacccgatgcactaaagctcccacatacacagggtttgggaaatggttccaccattt--ggtgtattgtacgcagcctt----accatgttt 27573663  T
Q  245 ttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
     |||||||||| | ||| |  ||||||| |||  || | ||||||||||||||||||||||||||||||||||||    
T  27573662 atacacaagaggctgttgcccggacttgaaccaatgacctttcagtcacatgacaacaactttaccagttgcgcc 27573588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 166 - 309
Target Start/End: Original strand, 99285 - 99421
Alignment:
Q  166 aaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttttacacaagagaccgtttcta 265  Q
    ||||||||| ||||| ||||||| | |||||||| |||||||||  |||||||| ||||||||||| ||     |||||||  ||||||| | |||||||    
T  99285 aaagctcccgcatacacagggtctgagaaggggttccaccattt--ggtgtattgtacgcagccttgcca----tgtttttt-acaagaggctgtttcta 99377  T
Q  266 ggacttggacccgtgtcgtttcagtcacatgacaacaactttac 309  Q
    ||||||| ||||||| | |||||||||| |||||||||||||||    
T  99378 ggacttgaacccgtgacctttcagtcacgtgacaacaactttac 99421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 144 - 219
Target Start/End: Complemental strand, 23488620 - 23488545
Alignment:
Q  144 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtatt 219  Q
    |||||| ||| | |||||||| ||||||| | |||||||||||||||||||||||||||||||||||| |||||||    
T  23488620 taaaagagcaacccggtgcactaaagctctcgcatacgcagggtccgggaaggggtcccaccattttttgtgtatt 23488545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 166 - 308
Target Start/End: Original strand, 31158459 - 31158598
Alignment:
Q  166 aaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-tttttacacaagagaccgtttct 264  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||||||| |||| || |||  ||    ||||||| ||||||| |||||| | ||||      
T  31158459 aaagctcccgcatacgcagggtctgggaaggggtcccaccatttttggtttattgtatgcaatct----taccctgttttttacgcaagaggctgttttg 31158554  T
Q  265 aggacttggacccgtgtcgtttcagtcacatgacaacaacttta 308  Q
    | |||||  |||| || | |||||||||||||||||||||||||    
T  31158555 aagactttaacccttgacctttcagtcacatgacaacaacttta 31158598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 144 - 319
Target Start/End: Original strand, 39914304 - 39914474
Alignment:
Q  144 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtt 243  Q
    |||||||||| | || ||||| ||||||||| ||||||||||||| || ||||||||||||||||   |||||||| ||| || ||||    ||||||||    
T  39914304 taaaagggcaacccgatgcactaaagctcccgcatacgcagggtcagg-aaggggtcccaccattc--ggtgtattgtacacatcctt----accctgtt 39914396  T
Q  244 tt--tacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    ||  ||||||||||   ||||| || |||||  |||||| | || |||||||||||||||||||||||||| ||||||    
T  39914397 tttttacacaagaggttgtttccagtacttgatcccgtgaccttccagtcacatgacaacaactttaccagatgcgcc 39914474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 144 - 311
Target Start/End: Complemental strand, 44643660 - 44643497
Alignment:
Q  144 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-- 241  Q
    |||||||||||| |||||||| || |||||| ||||||||||||| |||||||||||||||||  ||||||  ||| ||||||||||    ||| |||      
T  44643660 taaaagggcagcccggtgcactaaggctcccgcatacgcagggtctgggaaggggtcccacca--tttggtacattgtacgcagcct----tactctgtt 44643567  T
Q  242 tttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttacca 311  Q
    |||||||  ||||| |  ||||||| ||||| || |||| | ||||||||||||||  ||||||||||||    
T  44643566 tttttacggaagaggctctttctagaacttgaacacgtgacctttcagtcacatgatgacaactttacca 44643497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 208 - 310
Target Start/End: Original strand, 29419945 - 29420048
Alignment:
Q  208 ttttggtgtattttacgcagccttccctaccctgtttt-tacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactt 306  Q
    |||||||||||| ||||||||||| | ||||||||||| ||||||||||   ||||| |||||||| || |||| | |||||||||  ||||||||||||    
T  29419945 ttttggtgtattgtacgcagccttacttaccctgttttttacacaagaggttgtttccaggacttgaactcgtgacctttcagtcatgtgacaacaactt 29420044  T
Q  307 tacc 310  Q
    ||||    
T  29420045 tacc 29420048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 158 - 319
Target Start/End: Original strand, 19977726 - 19977882
Alignment:
Q  158 ggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttc-cctaccctgtttttacacaagaga 256  Q
    ||||||| ||||||||| ||||| || ||| ||||||||| |||||||||||  |||||||| |||||| ||||  ||||     |||||||| |||||     
T  19977726 ggtgcactaaagctcccgcatacacaaggttcgggaagggatcccaccattt--ggtgtattgtacgcaaccttatcctat----tttttacaaaagagg 19977819  T
Q  257 ccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    | ||||| || ||||| ||||||| | |||| |||||||||||||||||| ||||||| ||||    
T  19977820 ctgtttccagaacttgaacccgtgacctttcggtcacatgacaacaacttcaccagttccgcc 19977882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 146 - 231
Target Start/End: Original strand, 40762234 - 40762317
Alignment:
Q  146 aaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt 231  Q
    |||||||| | |||||||| ||||||||| |||||||||||||| |||| |||||||||||  ||||||||||| |||| ||||||    
T  40762234 aaagggcaacccggtgcactaaagctcccacatacgcagggtccaggaaagggtcccacca--tttggtgtattgtacgtagcctt 40762317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 183 - 308
Target Start/End: Complemental strand, 5450384 - 5450263
Alignment:
Q  183 agggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg--tttttacacaagagaccgtttctaggacttggacccgtg 280  Q
    ||||||| ||||||||||||||| |||  |||||||| ||||||||||    |||| ||  ||||||||||||||   ||||| |||| ||| |||||||    
T  5450384 agggtccaggaaggggtcccacccttt--ggtgtattgtacgcagcct----taccatgtttttttacacaagaggttgtttccaggaattgaacccgtg 5450291  T
Q  281 tcgtttcagtcacatgacaacaacttta 308  Q
     | |||||||||||||||||||||||||    
T  5450290 acctttcagtcacatgacaacaacttta 5450263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 146 - 306
Target Start/End: Original strand, 17380238 - 17380391
Alignment:
Q  146 aaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttt 245  Q
    |||||| ||| |||||||| ||||||||| ||| |||||||||| ||||||||| ||| |||||  ||||||||  || || ||||    |||||||||     
T  17380238 aaagggaagcccggtgcac-aaagctcccgcatccgcagggtccaggaaggggttccatcattt--ggtgtattgcacacaacctt----accctgttta 17380330  T
Q  246 tacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactt 306  Q
    ||||||||||   ||||| | |||||| ||||||| | |||| ||||||||||||||||||    
T  17380331 tacacaagaggttgtttccaagacttgaacccgtgacctttcggtcacatgacaacaactt 17380391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 244 - 316
Target Start/End: Complemental strand, 17705537 - 17705465
Alignment:
Q  244 tttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgc 316  Q
    |||||||||||| | ||||| |||||||| ||||||| | ||  |||||||||||||||||||||||||||||    
T  17705537 tttacacaagaggcggtttccaggacttgaacccgtgaccttctagtcacatgacaacaactttaccagttgc 17705465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 157 - 301
Target Start/End: Complemental strand, 25641625 - 25641487
Alignment:
Q  157 cggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttttacacaagaga 256  Q
    |||| ||| ||||||| | |||||||||| | |||||||||||||||| ||||  |||||||| |||||| | ||    |||||||||| |||||| |      
T  25641625 cggttcactaaagctctcgcatacgcaggattcgggaaggggtcccacaattt--ggtgtattgtacgcaacttt----accctgttttcacacaaaatg 25641532  T
Q  257 ccgtttctaggacttggacccgtgtcgtttcagtcacatgacaac 301  Q
    | ||||| |||||||| ||||||| | ||||||||||||||||||    
T  25641531 ctgtttccaggacttgaacccgtgacctttcagtcacatgacaac 25641487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 165 - 310
Target Start/End: Complemental strand, 33795401 - 33795261
Alignment:
Q  165 caaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattt-tacgcagccttccctaccctg-tttttacacaagagaccgttt 262  Q
    |||||||||| ||||| ||||||| |||||||||||||||||   | ||||||||| ||||||||||    ||||||| ||||||| ||||||   ||||    
T  33795401 caaagctcccgcatacacagggtctgggaaggggtcccacca---taggtgtatttgtacgcagcct----taccctgttttttacccaagaggttgttt 33795309  T
Q  263 ctaggacttggacccgtgtcgtttcagtcacatgacaacaactttacc 310  Q
    |  ||||||| ||||||| | ||||| |||| ||||||||||||||||    
T  33795308 ccgggacttgaacccgtgacctttcaatcacgtgacaacaactttacc 33795261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 147 - 207
Target Start/End: Original strand, 40579750 - 40579810
Alignment:
Q  147 aagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccat 207  Q
    ||||||| | |||||||| ||||||||| ||||| ||||||||||||||||||||||||||    
T  40579750 aagggcaacccggtgcactaaagctcccgcatactcagggtccgggaaggggtcccaccat 40579810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 149 - 309
Target Start/End: Original strand, 45235820 - 45235976
Alignment:
Q  149 gggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt-ccctaccctgttttta 247  Q
    ||||| || ||| ||| ||||||||  |||||| |||||| || ||||||||||||||||||  |||||||  ||| |||||| |||||   |  |||||    
T  45235820 gggcaacttggtacactaaagctcctgcatacgtagggtctggtaaggggtcccaccatttt--gtgtattacacgtagccttacccta---ttatttta 45235914  T
Q  248 cacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttac 309  Q
    || ||||||| |||||||||||||| || ||||   |||||||||||||| |||||||||||    
T  45235915 cagaagagactgtttctaggacttgaactcgtgatctttcagtcacatgagaacaactttac 45235976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 158 - 297
Target Start/End: Complemental strand, 19615116 - 19614981
Alignment:
Q  158 ggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-tttttacacaagaga 256  Q
    ||||||| ||||||||  |||||||||||| ||||||||||| |||| ||| ||||| |||| ||||||| ||    ||||||| |||||| |||||||     
T  19615116 ggtgcactaaagctcctgcatacgcagggttcgggaaggggt-ccactattattggtatattgtacgcagtct----taccctgttttttatacaagagg 19615022  T
Q  257 ccgtttctaggacttggacccgtgtcgtttcagtcacatga 297  Q
      ||||| |||||||| ||||||| | ||||||||||||||    
T  19615021 atgtttcaaggacttgaacccgtgacctttcagtcacatga 19614981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 235 - 314
Target Start/End: Complemental strand, 44604905 - 44604826
Alignment:
Q  235 taccctgtttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagtt 314  Q
    |||||||||||||||||||||   ||||| |||||||| ||| ||| | || |||||||||||||||||||||| |||||    
T  44604905 taccctgtttttacacaagaggttgtttccaggacttgaacctgtgaccttccagtcacatgacaacaactttagcagtt 44604826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 145 - 231
Target Start/End: Original strand, 15296405 - 15296490
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt 231  Q
    |||||||||||  || ||||||||||| || ||||||||||||||| |||||| |||||| | ||||||| |||| |||||||||||    
T  15296405 aaaagggcagcctggcgcaccaaagcttccacatacgcagggtccgagaagggatcccacta-ttttggtatattgtacgcagcctt 15296490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 157 - 318
Target Start/End: Original strand, 26684631 - 26684789
Alignment:
Q  157 cggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt-ccctaccctgtttttacacaaga- 254  Q
    |||||||  ||||||||| |||||||||||| ||||||| ||||||||||  ||| || |||| ||||||||||| || ||   | |||||||||||||     
T  26684631 cggtgcattaaagctcccgcatacgcagggttcgggaagaggtcccacca--tttagtatattgtacgcagccttaccata---tttttttacacaagag 26684725  T
Q  255 gaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgc 318  Q
    | | ||||  |||||||  |||  || | ||||| |||||||||||||||||||||||||||||    
T  26684726 gtctgttttcaggacttaaacctttgacctttcaatcacatgacaacaactttaccagttgcgc 26684789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 144 - 206
Target Start/End: Complemental strand, 34080238 - 34080176
Alignment:
Q  144 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccacca 206  Q
    |||||||||| | |||||||| ||| ||||| |||| ||||||||||||||||||||||||||    
T  34080238 taaaagggcaacccggtgcactaaaactcccgcatatgcagggtccgggaaggggtcccacca 34080176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 160 - 206
Target Start/End: Complemental strand, 34766376 - 34766330
Alignment:
Q  160 tgcaccaaagctccctcatacgcagggtccgggaaggggtcccacca 206  Q
    ||||| ||||||||| |||||||||||||||||||||||||||||||    
T  34766376 tgcactaaagctcccgcatacgcagggtccgggaaggggtcccacca 34766330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 159 - 231
Target Start/End: Complemental strand, 24890533 - 24890463
Alignment:
Q  159 gtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt 231  Q
    |||||| ||||||||  |||||||||||||||||||||||||||||||   |||||||||| || ||||||||    
T  24890533 gtgcactaaagctcctgcatacgcagggtccgggaaggggtcccacca--attggtgtattgtatgcagcctt 24890463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 170 - 231
Target Start/End: Original strand, 44449407 - 44449467
Alignment:
Q  170 ctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt 231  Q
    ||||| || |||||||||||||||||||||||||| | |||||||||||| |||||||||||    
T  44449407 ctcccacaaacgcagggtccgggaaggggtcccacta-ttttggtgtattgtacgcagcctt 44449467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 166 - 226
Target Start/End: Original strand, 19185763 - 19185823
Alignment:
Q  166 aaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgca 226  Q
    ||||||||| |||||||||||||| ||||||||| ||||||||||| ||| ||| ||||||    
T  19185763 aaagctcccgcatacgcagggtccaggaaggggttccaccattttttgtgcattgtacgca 19185823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 158 - 201
Target Start/End: Complemental strand, 8576018 - 8575975
Alignment:
Q  158 ggtgcaccaaagctccctcatacgcagggtccgggaaggggtcc 201  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||    
T  8576018 ggtgcactaaagctcccacatacgcagggtccgggaaggggtcc 8575975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 284 - 319
Target Start/End: Original strand, 27466263 - 27466298
Alignment:
Q  284 tttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    ||||||||||||||||||||||||||||||||||||    
T  27466263 tttcagtcacatgacaacaactttaccagttgcgcc 27466298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 165 - 227
Target Start/End: Original strand, 32781307 - 32781367
Alignment:
Q  165 caaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcag 227  Q
    |||||||||| ||||| ||||||| |||||||||||||||||  ||||||||||| |||||||    
T  32781307 caaagctcccgcatacacagggtctgggaaggggtcccacca--tttggtgtattgtacgcag 32781367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 148 - 207
Target Start/End: Complemental strand, 41409995 - 41409936
Alignment:
Q  148 agggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccat 207  Q
    |||||| | ||||||||  |||||||| |||| |||||||||||||||||||||||||||    
T  41409995 agggcaacccggtgcactgaagctcccgcatatgcagggtccgggaaggggtcccaccat 41409936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 200
Target Start/End: Original strand, 3633708 - 3633762
Alignment:
Q  146 aaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtc 200  Q
    |||||||| |||||||||| ||||||||| |||| || |||||||||||||||||    
T  3633708 aaagggcaactcggtgcactaaagctcccgcatatgcggggtccgggaaggggtc 3633762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 144 - 194
Target Start/End: Complemental strand, 22371249 - 22371199
Alignment:
Q  144 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaa 194  Q
    |||||||||| | |||||||| ||||||||| |||||||||||||||||||    
T  22371249 taaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaa 22371199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 231
Target Start/End: Complemental strand, 25632644 - 25632561
Alignment:
Q  146 aaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt 231  Q
    |||||||| | |||||||| ||||||||| |||||| | ||| ||||||||  ||||||||  ||||||||||| |||||||||||    
T  25632644 aaagggcaacccggtgcactaaagctcccgcatacgtaaggttcgggaaggaatcccacca--tttggtgtattgtacgcagcctt 25632561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 166 - 207
Target Start/End: Original strand, 24059016 - 24059057
Alignment:
Q  166 aaagctccctcatacgcagggtccgggaaggggtcccaccat 207  Q
    ||||||||| |||||||||||||||| |||||||||||||||    
T  24059016 aaagctcccacatacgcagggtccggaaaggggtcccaccat 24059057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 319
Target Start/End: Original strand, 39189556 - 39189589
Alignment:
Q  286 tcagtcacatgacaacaactttaccagttgcgcc 319  Q
    ||||||||||||||||||||||||||||||||||    
T  39189556 tcagtcacatgacaacaactttaccagttgcgcc 39189589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 184 - 310
Target Start/End: Original strand, 23145736 - 23145857
Alignment:
Q  184 gggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-tttttacacaagagaccgtttctaggacttggacccgtgtc 282  Q
    ||||||||||| |||||||||||   |||||||||| ||||||||||    ||| ||| |||||||||||||| | ||||  | |||||| ||||||| |    
T  23145736 gggtccgggaaagggtcccacca--attggtgtattgtacgcagcct----tacactgttttttacacaagagtctgttttcaagacttgaacccgtgac 23145829  T
Q  283 gtttcagtcacatgacaacaactttacc 310  Q
     ||||||||||   ||||||||||||||    
T  23145830 ctttcagtcacgctacaacaactttacc 23145857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 184 - 310
Target Start/End: Original strand, 23557526 - 23557647
Alignment:
Q  184 gggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-tttttacacaagagaccgtttctaggacttggacccgtgtc 282  Q
    ||||||||||| |||||||||||   |||||||||| ||||||||||    ||| ||| |||||||||||||| | ||||  | |||||| ||||||| |    
T  23557526 gggtccgggaaagggtcccacca--attggtgtattgtacgcagcct----tacactgttttttacacaagagtctgttttcaagacttgaacccgtgac 23557619  T
Q  283 gtttcagtcacatgacaacaactttacc 310  Q
     ||||||||||   ||||||||||||||    
T  23557620 ctttcagtcacgctacaacaactttacc 23557647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 311
Target Start/End: Original strand, 40416871 - 40417031
Alignment:
Q  146 aaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttt 245  Q
    |||||||| | |||||||| ||||||| | |||| |||||||||   || |||||||| || ||  |||||||| ||| ||||||| ||    |||||||    
T  40416871 aaagggcaacccggtgcactaaagctctcgcatatgcagggtccaaaaaagggtcccatcaatt--ggtgtattgtacacagcctttcc----ctgtttt 40416964  T
Q  246 t-acacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttacca 311  Q
    | | |||||||   ||||| | |||||| ||||||| | || |||||||||||||||||||||||||    
T  40416965 ttatacaagaggttgtttccatgacttgaacccgtgaccttccagtcacatgacaacaactttacca 40417031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 194
Target Start/End: Original strand, 124925 - 124962
Alignment:
Q  157 cggtgcaccaaagctccctcatacgcagggtccgggaa 194  Q
    |||||||| ||||||||| |||||||||||||||||||    
T  124925 cggtgcactaaagctcccgcatacgcagggtccgggaa 124962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 193
Target Start/End: Complemental strand, 760114 - 760066
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccggga 193  Q
    |||||| ||||  ||||||||||||||||| |||||||||||| |||||    
T  760114 aaaaggacagcctggtgcaccaaagctcccacatacgcagggttcggga 760066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 193
Target Start/End: Original strand, 23052964 - 23053012
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccggga 193  Q
    ||||||||||| |||||||| ||||||||  ||||||||||||| ||||    
T  23052964 aaaagggcagcccggtgcacaaaagctcctgcatacgcagggtctggga 23053012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 100; Significance: 2e-49; HSPs: 58)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 144 - 319
Target Start/End: Complemental strand, 38879720 - 38879548
Alignment:
Q  144 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-t 242  Q
    |||||||||| | |||||||| ||||||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||    ||||||| |    
T  38879720 taaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagcct----taccctgtt 38879625  T
Q  243 ttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    ||||| ||||||| | ||||| |||||||| ||||||| | ||||||||||||||||||||||||||||||||||||    
T  38879624 ttttatacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgcc 38879548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 145 - 319
Target Start/End: Complemental strand, 43334340 - 43334169
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttt 244  Q
    ||||||||| | |||||||| ||||||||| ||| |||||||||||||||||||||||||||||||||||||||| |||||||||||    |||||||||    
T  43334340 aaaagggcaacccggtgcactaaagctcccgcat-cgcagggtccgggaaggggtcccaccatttttggtgtattgtacgcagcctt----accctgttt 43334246  T
Q  245 tt--acacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    ||  ||||| ||| | ||||| |||||||| ||||||| | ||||||||||||||||||||||||||||||||||||    
T  43334245 ttttacacaggaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgcc 43334169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 144 - 319
Target Start/End: Complemental strand, 41014455 - 41014286
Alignment:
Q  144 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtt 243  Q
    |||||||||| | |||||||| ||||||||| |||| || |||||| |||||||||||||||||||  |||||||| |||||||||||    ||||||||    
T  41014455 taaaagggcaacccggtgcactaaagctcccgcatatgcggggtccaggaaggggtcccaccattt--ggtgtattgtacgcagcctt----accctgtt 41014362  T
Q  244 tttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    |||||||||||| | ||||| |||||||| ||||||| | || |||||||||||||||||||||||||||||||||    
T  41014361 tttacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgcc 41014286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 144 - 319
Target Start/End: Original strand, 4619102 - 4619274
Alignment:
Q  144 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-t 242  Q
    |||||||||| | |||||||| ||||||| | |||| || ||||||||||||||||||||||||| |||||||||| ||||||||||    ||||||| |    
T  4619102 taaaagggcaacccggtgcactaaagctctcgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagcct----taccctgtt 4619197  T
Q  243 ttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    ||||||||||||| |  |||| |||||||| ||||||| | || |||||||||||||||||||||||||||||||||    
T  4619198 ttttacacaagaggctatttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgcc 4619274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 166 - 317
Target Start/End: Complemental strand, 27328869 - 27328721
Alignment:
Q  166 aaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-tttttacacaagagaccgtttct 264  Q
    ||||||||| |||||||||||| |||||||||||||||||||| |||||||||| ||||||||||    ||||||| |||||||||||||||| |||||     
T  27328869 aaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcct----taccctgttttttacacaagagactgtttcc 27328774  T
Q  265 aggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcg 317  Q
    |||||||| ||| ||| | |||||||||||||||||||||||||||| |||||    
T  27328773 aggacttgaacctgtgacctttcagtcacatgacaacaactttaccaattgcg 27328721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 145 - 319
Target Start/End: Complemental strand, 24449026 - 24448857
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt-ccctaccctgtt 243  Q
    ||||||||| | |||||||| ||||||||  |||||||||||||||||||||||||||||||  ||||||||||| ||||||||||| |||||     ||    
T  24449026 aaaagggcaacccggtgcactaaagctcctgcatacgcagggtccgggaaggggtcccacca--tttggtgtattgtacgcagccttacccta----ttt 24448933  T
Q  244 tttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    ||||||||| || | ||||| |||||||| ||||||| | || |||||||||||||||||||||||||||||||||    
T  24448932 tttacacaaaaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgcc 24448857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 145 - 319
Target Start/End: Original strand, 8169983 - 8170150
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttt 244  Q
    ||||||||| | ||||||||  || ||||| |||| |||||||||||||||||||||||||||||  |||||||| |||||||||||    |||||||||    
T  8169983 aaaagggcaacccggtgcactgaaactcccgcatatgcagggtccgggaaggggtcccaccattt--ggtgtattgtacgcagcctt----accctgttt 8170076  T
Q  245 ttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    | |||||| || | ||||| |||||||| ||||||| | |||| |||||||||||||||||||||||||||||||    
T  8170077 t-acacaaaaggctgtttccaggacttgaacccgtgacctttcggtcacatgacaacaactttaccagttgcgcc 8170150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 143 - 299
Target Start/End: Complemental strand, 32703560 - 32703411
Alignment:
Q  143 ctaaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgt 242  Q
    ||||||||||| | |||||||| | ||||||| |||| ||||||||||||||||||||||||||  ||||||||||| ||||||||||    |||||||     
T  32703560 ctaaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccacca--tttggtgtattgtacgcagcct----taccctg- 32703468  T
Q  243 ttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgaca 299  Q
    ||||||||||||| | ||||| |||||||| ||||||| | ||||||||||||||||    
T  32703467 ttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgaca 32703411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 145 - 319
Target Start/End: Complemental strand, 35710447 - 35710280
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttt 244  Q
    ||||||||| | |||||||| | ||||||| |||| ||| | ||||||||||||||||||||  |||||||||||  |||||||||    ||||||  ||    
T  35710447 aaaagggcaacccggtgcactagagctcccgcatatgcatgttccgggaaggggtcccacca--tttggtgtattgaacgcagcct----taccct-att 35710355  T
Q  245 ttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    ||||||||||| | ||||| |||||||| ||||||| | ||||||| ||||||||||||||||||||||||||||    
T  35710354 ttacacaagaggctgtttccaggacttgaacccgtgacctttcagttacatgacaacaactttaccagttgcgcc 35710280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 145 - 311
Target Start/End: Original strand, 19142942 - 19143102
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttt 244  Q
    ||||||||||  | |||||| ||| ||||| |||||||| ||||||||||||||||||||||  ||||||||| | ||||||||||    ||||||||||    
T  19142942 aaaagggcaggccagtgcactaaatctcccgcatacgcatggtccgggaaggggtcccacca--tttggtgtactgtacgcagcct----taccctgttt 19143035  T
Q  245 ttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttacca 311  Q
    |||||||||||   ||||| |||||||| ||| ||| | ||| |||||| ||||||||| |||||||    
T  19143036 ttacacaagaggttgtttccaggacttgaacctgtggcattttagtcacgtgacaacaattttacca 19143102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 160 - 319
Target Start/End: Complemental strand, 2838899 - 2838745
Alignment:
Q  160 tgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttttacacaagagaccg 259  Q
    |||||| | |||||| ||||||||||||||| |||||| ||||||||  ||||||||||| ||||||||||    ||||||||||||||||||||  | |    
T  2838899 tgcaccgatgctcccgcatacgcagggtccgagaagggatcccacca--tttggtgtattgtacgcagcct----taccctgtttttacacaagatgctg 2838806  T
Q  260 tttctaggacttggacccgtgtcgttt-cagtcacatgacaacaactttaccagttgcgcc 319  Q
    |||||  ||||||  | |||| | ||| |||||||||||||||||||||||| ||||||||    
T  2838805 tttctgagacttgacctcgtgacctttacagtcacatgacaacaactttaccggttgcgcc 2838745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 146 - 226
Target Start/End: Original strand, 12575660 - 12575739
Alignment:
Q  146 aaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgca 226  Q
    |||||||||| |||||||||||||||||  |||||||||||||| |||||||||||||||| |||||||||||| ||||||    
T  12575660 aaagggcagcccggtgcaccaaagctcctgcatacgcagggtccaggaaggggtcccacca-ttttggtgtattgtacgca 12575739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 146 - 277
Target Start/End: Original strand, 13801767 - 13801895
Alignment:
Q  146 aaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-ttt 244  Q
    |||||||| | |||||||| ||||||| | |||| || ||||||||||||||||||||||||| |||||||||| ||||||||||    ||||||| |||    
T  13801767 aaagggcaacccggtgcactaaagctctcgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagcct----taccctgtttt 13801862  T
Q  245 ttacacaagagaccgtttctaggacttggaccc 277  Q
    ||||||||||| | | ||| |||||||| ||||    
T  13801863 ttacacaagaggctgcttccaggacttgaaccc 13801895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 146 - 319
Target Start/End: Complemental strand, 1565566 - 1565398
Alignment:
Q  146 aaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttt 245  Q
    |||||||| | |||||||| || |||||| |||| |||||||||||||||||||||| ||||||  |||| ||| |||||||||||   ||   | ||||    
T  1565566 aaagggcaacccggtgcactaa-gctcccacatatgcagggtccgggaaggggtcccgccattt--ggtgcattgtacgcagccttaa-tatgtt-tttt 1565472  T
Q  246 tacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    ||| ||||||   ||||| |||||||| ||||| | | ||||||||||||||||||||||||||||||||||||    
T  1565471 tactcaagaggttgtttccaggacttgaacccgcgacctttcagtcacatgacaacaactttaccagttgcgcc 1565398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 157 - 319
Target Start/End: Complemental strand, 39301247 - 39301091
Alignment:
Q  157 cggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttt-tacacaagag 255  Q
    |||||||| ||| ||||| |||||| ||||||||||||||||||||||| ||||||||| ||| ||||||    ||| ||||||||||| ||||||||||    
T  39301247 cggtgcactaaa-ctcccacatacggagggtccgggaaggggtcccacc-tttttggtgcattatacgca----tccttaccctgttttatacacaagag 39301154  T
Q  256 accgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
       ||| | | |||||| ||||||| | ||||||| ||||||||||||||||||| ||||||||    
T  39301153 gttgttcccaagacttgaacccgtgacctttcagtaacatgacaacaactttacc-gttgcgcc 39301091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 144 - 310
Target Start/End: Original strand, 208925 - 209086
Alignment:
Q  144 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtt 243  Q
    |||||| || || |||||||| |||||||   ||||| |||||||| |||||||||||||||| ||||||||||||  | |||||||    |||||||||    
T  208925 taaaagtgccgcccggtgcactaaagctcttgcatacccagggtccaggaaggggtcccacca-ttttggtgtattgaatgcagcct----taccctgtt 209019  T
Q  244 tttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttacc 310  Q
    ||||||||||||   ||| | |||||||| ||  ||| | ||| |||||||||||||||||||||||    
T  209020 tttacacaagaggttgttgccaggacttgaacttgtgaccttttagtcacatgacaacaactttacc 209086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 146 - 255
Target Start/End: Original strand, 7097760 - 7097863
Alignment:
Q  146 aaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttt 245  Q
    ||||||||||  ||||||| ||||||||| |||||||||||| |||||||||||| |||||  ||||||||||| |||||| |||    |||||||||||    
T  7097760 aaagggcagcatggtgcactaaagctcccgcatacgcagggttcgggaaggggtctcacca--tttggtgtattgtacgcaacct----taccctgtttt 7097853  T
Q  246 tacacaagag 255  Q
    ||||||||||    
T  7097854 tacacaagag 7097863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 147 - 319
Target Start/End: Original strand, 12006329 - 12006498
Alignment:
Q  147 aagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt-ccctaccctgtttt 245  Q
    ||||||| | |||||||| ||||||||| |||| |||||||| ||||||||||||||||||| |||||||||| || | |||||| |||||     ||||    
T  12006329 aagggcaacacggtgcactaaagctcccgcataggcagggtctgggaaggggtcccaccattattggtgtattgtatggagccttacccta----ttttt 12006424  T
Q  246 tacacaagagaccgtttctaggacttgga-cccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    |||| |||||   ||||| | |||||| | |||||| | ||||||||||||||||||||||| | ||||||||||    
T  12006425 tacataagaggttgtttcca-gacttgaaccccgtgacctttcagtcacatgacaacaacttgagcagttgcgcc 12006498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 144 - 209
Target Start/End: Complemental strand, 16957451 - 16957386
Alignment:
Q  144 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccattt 209  Q
    |||||||||| | |||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  16957451 taaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattt 16957386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 166 - 314
Target Start/End: Complemental strand, 22600569 - 22600426
Alignment:
Q  166 aaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgt-ttttacacaagagaccgtttct 264  Q
    ||||||||| |||||||||| ||||||||||| ||||||||  ||||||||||| ||| ||||||    |||||||| |||||||||| | |  |||||     
T  22600569 aaagctcccgcatacgcaggatccgggaagggatcccacca--tttggtgtattgtacacagcct----taccctgtgttttacacaaaatattgtttcc 22600476  T
Q  265 aggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagtt 314  Q
    |||||||| ||||||  | || ||||||||||| ||||||||||||||||    
T  22600475 aggacttgaacccgtaaccttccagtcacatgataacaactttaccagtt 22600426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 243 - 316
Target Start/End: Original strand, 37024646 - 37024719
Alignment:
Q  243 ttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgc 316  Q
    ||||||||||||| | ||||| |||||||| ||||||| | |||||||||||||||||||||||||||||||||    
T  37024646 ttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgc 37024719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 157 - 217
Target Start/End: Complemental strand, 25622584 - 25622524
Alignment:
Q  157 cggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgta 217  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  25622584 cggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgta 25622524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 157 - 272
Target Start/End: Complemental strand, 43574730 - 43574620
Alignment:
Q  157 cggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttt-tacacaagag 255  Q
    |||||| | ||||||||| |||||||||||||||||||||||||||||||  |||||| |||| ||||||||||    ||||||||||| ||||||||||    
T  43574730 cggtgctctaaagctcccgcatacgcagggtccgggaaggggtcccacca--tttggtatattgtacgcagcct----taccctgttttctacacaagag 43574637  T
Q  256 accgtttctaggacttg 272  Q
    |  ||||| ||||||||    
T  43574636 attgtttccaggacttg 43574620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 144 - 231
Target Start/End: Complemental strand, 29334533 - 29334447
Alignment:
Q  144 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt 231  Q
    |||||||||||| |||||||  |||| |||| ||||||||||||||||||| ||||||||||| || ||||||||| |||||||||||    
T  29334533 taaaagggcagcccggtgcattaaagatcccacatacgcagggtccgggaatgggtcccacca-ttctggtgtattgtacgcagcctt 29334447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 144 - 315
Target Start/End: Original strand, 22861667 - 22861830
Alignment:
Q  144 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtt 243  Q
    ||||||||||  ||||||||| | ||||||| |||| ||||||| || ||||||||||||||||||  | |||||| |  |||| ||| | |       |    
T  22861667 taaaagggcaattcggtgcactagagctcccgcatatgcagggttcgagaaggggtcccaccattt--gatgtattgtgagcagtcttacttg------t 22861758  T
Q  244 tttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttg 315  Q
    |||||||||||||| | |||||||||||| | ||||| | ||||||||||||||||||||||||| ||||||    
T  22861759 tttacacaagagactgcttctaggacttgaatccgtgacctttcagtcacatgacaacaactttatcagttg 22861830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 147 - 231
Target Start/End: Complemental strand, 20135740 - 20135656
Alignment:
Q  147 aagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt 231  Q
    ||||||| | ||||||||  |||||||  |||| || ||||||||||||||||||||||||| |||||||||| |||||||||||    
T  20135740 aagggcaacccggtgcactgaagctcctgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagcctt 20135656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 144 - 206
Target Start/End: Complemental strand, 3771476 - 3771414
Alignment:
Q  144 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccacca 206  Q
    |||||||||||| |||||||| ||||||||| ||||| ||| |||||||||||||||||||||    
T  3771476 taaaagggcagcccggtgcactaaagctcccacatacacagagtccgggaaggggtcccacca 3771414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 157 - 271
Target Start/End: Complemental strand, 7368520 - 7368413
Alignment:
Q  157 cggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttttacacaagaga 256  Q
    |||||||| | ||||||| |||| ||||||||||||||||||||||||||   |||||||||| ||||||||||    ||||||| |||||||||||||     
T  7368520 cggtgcactagagctcccacatatgcagggtccgggaaggggtcccacca--attggtgtattgtacgcagcct----taccctg-ttttacacaagagg 7368428  T
Q  257 ccgtttctaggactt 271  Q
    | ||||| |||||||    
T  7368427 ctgtttccaggactt 7368413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 145 - 231
Target Start/End: Original strand, 12477119 - 12477204
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt 231  Q
    |||||||||| | ||||||| |||||||   |||||||||  |||||||||||||||||||| |||||||||||| |||||||||||    
T  12477119 aaaagggcagttgggtgcactaaagctcttgcatacgcagaatccgggaaggggtcccacca-ttttggtgtattgtacgcagcctt 12477204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 146 - 231
Target Start/End: Original strand, 34154814 - 34154897
Alignment:
Q  146 aaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt 231  Q
    |||||||| | |||||||| | |||| || |||| ||||||||||||||||||||||||||  ||||||||||| |||||||||||    
T  34154814 aaagggcaacccggtgcactagagctaccgcatatgcagggtccgggaaggggtcccacca--tttggtgtattgtacgcagcctt 34154897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 166 - 219
Target Start/End: Original strand, 10306494 - 10306546
Alignment:
Q  166 aaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtatt 219  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||||||||||    
T  10306494 aaagctcccgcatacgcagggtccgggaaggggtcccacca-ttttggtgtatt 10306546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 149 - 210
Target Start/End: Original strand, 21784335 - 21784396
Alignment:
Q  149 gggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttt 210  Q
    ||||| |||||||||| ||| ||||| |||||||||||||||| ||||||||||||||||||    
T  21784335 gggcaactcggtgcactaaacctcccgcatacgcagggtccggaaaggggtcccaccatttt 21784396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 145 - 310
Target Start/End: Original strand, 28516432 - 28516593
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttt 244  Q
    ||||||||| |  ||| ||| ||||||||  ||| ||||||||| ||||| ||||||||||||||| | |||||| |||||||||    ||| |||||||    
T  28516432 aaaagggcaacctggtccactaaagctcctgcatgcgcagggtctgggaatgggtcccaccatttt-gatgtattgtacgcagcc----ctagcctgttt 28516526  T
Q  245 t-tacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttacc 310  Q
    | ||||||||||   ||||| | |||||| ||||||| | |||||| ||| ||||||||||||||||    
T  28516527 tttacacaagaggatgtttccaagacttgaacccgtgacctttcagccacctgacaacaactttacc 28516593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 231
Target Start/End: Original strand, 16880658 - 16880730
Alignment:
Q  157 cggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt 231  Q
    |||||||| ||||||||| |||||||| ||||||||||| |||| |||||  ||||||||||| |||||||||||    
T  16880658 cggtgcactaaagctcccgcatacgcatggtccgggaagtggtcacacca--tttggtgtattgtacgcagcctt 16880730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 302
Target Start/End: Complemental strand, 1850763 - 1850624
Alignment:
Q  157 cggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttttacacaagaga 256  Q
    |||||||| |||||| || ||| |||||||||| ||||| ||||||||||  |||| |||||| |||||| |||    ||  |||||||||||||||||     
T  1850763 cggtgcactaaagcttccgcatccgcagggtccaggaagtggtcccacca--tttgatgtattgtacgcaccct----tattctgtttttacacaagagg 1850670  T
Q  257 ccgtttctaggacttggacccgtgtcgtttcagtcacatgacaaca 302  Q
       ||||  ||||||| ||||||| | |||||||||||||||||||    
T  1850669 ttatttccgggacttgaacccgtgacctttcagtcacatgacaaca 1850624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 145 - 210
Target Start/End: Complemental strand, 19093949 - 19093884
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttt 210  Q
    ||||||||||| |||||||| ||||||||  ||||||||||||||||| |||||||  ||||||||    
T  19093949 aaaagggcagcccggtgcactaaagctccaacatacgcagggtccgggtaggggtcataccatttt 19093884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 242 - 319
Target Start/End: Complemental strand, 22187329 - 22187252
Alignment:
Q  242 tttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    |||||||||||||| | ||||| |||||||  ||| ||| | ||||||||| |||||||||||||||| |||||||||    
T  22187329 tttttacacaagaggctgtttccaggacttaaaccggtgacctttcagtcaaatgacaacaactttactagttgcgcc 22187252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 242 - 319
Target Start/End: Complemental strand, 23974824 - 23974748
Alignment:
Q  242 tttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    ||||||||||||||   ||||| |||||||| ||||||| | || |||||||||||||||||||||||| ||||||||    
T  23974824 tttttacacaagaggttgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttacc-gttgcgcc 23974748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 145 - 205
Target Start/End: Original strand, 16028623 - 16028683
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccacc 205  Q
    ||||||||| | |||||||| | ||||||| |||| |||||||||||||||||||||||||    
T  16028623 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccacc 16028683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 146 - 205
Target Start/End: Original strand, 30877564 - 30877623
Alignment:
Q  146 aaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccacc 205  Q
    |||||||| | |||||||| | ||||||| |||| |||||||||||||||||||||||||    
T  30877564 aaagggcaacccggtgcactagagctcccacatatgcagggtccgggaaggggtcccacc 30877623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 143 - 206
Target Start/End: Complemental strand, 39801654 - 39801591
Alignment:
Q  143 ctaaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccacca 206  Q
    |||||| |||| | |||||||| ||||||||| |||||| |||||| |||||||||||||||||    
T  39801654 ctaaaatggcaacccggtgcactaaagctcccgcatacgtagggtctgggaaggggtcccacca 39801591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 231
Target Start/End: Original strand, 11657698 - 11657783
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt 231  Q
    ||||||||||| ||||| || |||| |||| | |  ||||||| |||||||||||||||||| |||||||||||| || ||||||||    
T  11657698 aaaagggcagcccggtgaactaaagttcccgcgtgtgcagggttcgggaaggggtcccacca-ttttggtgtattgtatgcagcctt 11657783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 145 - 202
Target Start/End: Original strand, 10943844 - 10943900
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtccc 202  Q
    ||||||||||| |||||||| ||||||||| |||  ||||||||||||||||||||||    
T  10943844 aaaagggcagcccggtgcactaaagctcccgcat-tgcagggtccgggaaggggtccc 10943900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 168 - 209
Target Start/End: Original strand, 21542489 - 21542530
Alignment:
Q  168 agctccctcatacgcagggtccgggaaggggtcccaccattt 209  Q
    ||||||| ||||||||| ||||||||||||||||||||||||    
T  21542489 agctcccgcatacgcagagtccgggaaggggtcccaccattt 21542530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 239 - 316
Target Start/End: Complemental strand, 31299679 - 31299602
Alignment:
Q  239 ctgtttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgc 316  Q
    ||||||| | ||||||| | |||||||||||||| ||  ||| | | | |||||||||||||||||||||||||||||    
T  31299679 ctgttttaatacaagaggctgtttctaggacttgaactagtgacctgtaagtcacatgacaacaactttaccagttgc 31299602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 144 - 197
Target Start/End: Complemental strand, 32354264 - 32354211
Alignment:
Q  144 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggg 197  Q
    |||||||||| | |||||||| ||||||||| ||||| ||||||||||||||||    
T  32354264 taaaagggcaacccggtgcactaaagctcccgcatacacagggtccgggaaggg 32354211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 194 - 301
Target Start/End: Original strand, 22907913 - 22908014
Alignment:
Q  194 aggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcac 293  Q
    ||||||||||||||||  |||||||| || ||| ||||    || ||||||||||||||||| | |||||| ||||||| |||| || | ||||||||||    
T  22907913 aggggtcccaccattt--ggtgtattgtatgcaacctt----actctgtttttacacaagaggctgtttcttggacttgaacccttgacctttcagtcac 22908006  T
Q  294 atgacaac 301  Q
    || |||||    
T  22908007 ataacaac 22908014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 152 - 210
Target Start/End: Original strand, 4654421 - 4654479
Alignment:
Q  152 cagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttt 210  Q
    ||||| ||||||| ||||||||| |||| ||||||| || |||||| ||||||||||||    
T  4654421 cagcttggtgcactaaagctcccgcatatgcagggttcgagaagggatcccaccatttt 4654479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 197
Target Start/End: Complemental strand, 13774998 - 13774949
Alignment:
Q  148 agggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggg 197  Q
    |||| ||| |||||||| ||||||||| |||||||||||||||| |||||    
T  13774998 agggtagcccggtgcactaaagctcccgcatacgcagggtccggaaaggg 13774949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 206
Target Start/End: Original strand, 24903695 - 24903756
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccacca 206  Q
    |||||| |||| ||||||||||||| |||| | || |||| ||||||||||||||| |||||    
T  24903695 aaaaggacagcccggtgcaccaaagttcccgcgtatgcagtgtccgggaaggggtctcacca 24903756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 219
Target Start/End: Original strand, 39079755 - 39079823
Alignment:
Q  150 ggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtatt 219  Q
    |||||| | |||||| ||| |||||  |||| || |||||||||||||||||||||| ||||||||||||    
T  39079755 ggcagccctgtgcactaaaactcccgtatacacatggtccgggaaggggtcccacca-ttttggtgtatt 39079823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 231
Target Start/End: Original strand, 42924841 - 42924917
Alignment:
Q  157 cggtgcaccaaagctccctcatacgcagggt--ccgggaaggggtcccaccatttttggtgtattttacgcagcctt 231  Q
    |||||||| |||||| || ||||||||||||  | |||||||| | ||| ||||||||||||||| |||||| ||||    
T  42924841 cggtgcactaaagcttccgcatacgcagggtgtctgggaagggattccatcatttttggtgtattgtacgcaacctt 42924917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 259 - 319
Target Start/End: Original strand, 10634254 - 10634313
Alignment:
Q  259 gtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    |||||||||||||| |||| || | |||||||||| |||||||||||| ||| ||||||||    
T  10634254 gtttctaggacttgaacccatgacctttcagtcacttgacaacaacttcacc-gttgcgcc 10634313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 144 - 219
Target Start/End: Original strand, 24313570 - 24313645
Alignment:
Q  144 taaaagggcagctcggtgcaccaaagctccctcatacgcagggt-ccgggaaggggtcccaccatttttggtgtatt 219  Q
    |||||||||||| |||||||| |||||| |  ||||| || ||  ||||||||||||||||||| ||||||||||||    
T  24313570 taaaagggcagcccggtgcactaaagctacagcatacacatggcgccgggaaggggtcccacca-ttttggtgtatt 24313645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 144 - 219
Target Start/End: Original strand, 24355907 - 24355982
Alignment:
Q  144 taaaagggcagctcggtgcaccaaagctccctcatacgcagggt-ccgggaaggggtcccaccatttttggtgtatt 219  Q
    |||||||||||| |||||||| |||||| |  ||||| || ||  ||||||||||||||||||| ||||||||||||    
T  24355907 taaaagggcagcccggtgcactaaagctacagcatacacatggcgccgggaaggggtcccacca-ttttggtgtatt 24355982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 157 - 209
Target Start/End: Complemental strand, 30006449 - 30006397
Alignment:
Q  157 cggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccattt 209  Q
    |||||||| ||||||||| |||||  |||  ||||||||||||||||||||||    
T  30006449 cggtgcactaaagctcccgcatacataggccccgggaaggggtcccaccattt 30006397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 306
Target Start/End: Original strand, 34074653 - 34074717
Alignment:
Q  242 tttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactt 306  Q
    |||||||||||||| | |||||||||||||| ||  ||| | |||||||||  ||||||||||||    
T  34074653 tttttacacaagaggctgtttctaggacttgaacttgtgacctttcagtcatgtgacaacaactt 34074717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 319
Target Start/End: Original strand, 39079882 - 39079933
Alignment:
Q  267 gacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    |||||| ||||||| | |||| |||||||||||||||||||||| ||||||||    
T  39079882 gacttgaacccgtgacctttctgtcacatgacaacaactttacc-gttgcgcc 39079933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 94; Significance: 8e-46; HSPs: 57)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 146 - 319
Target Start/End: Complemental strand, 13160836 - 13160669
Alignment:
Q  146 aaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttt 245  Q
    |||||||| | ||| ||||  |||||||| ||||||||||||||||||||||||||||||||||  |||||||| |||||||||||    ||||||||||    
T  13160836 aaagggcaacccggcgcactgaagctcccgcatacgcagggtccgggaaggggtcccaccattt--ggtgtattgtacgcagcctt----accctgtttt 13160743  T
Q  246 tacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    |||||||||| | |||||||||||||| ||||||| | || |||||||||||||||||||||||||||||||||    
T  13160742 tacacaagaggctgtttctaggacttgaacccgtgaccttacagtcacatgacaacaactttaccagttgcgcc 13160669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 144 - 319
Target Start/End: Original strand, 39460992 - 39461164
Alignment:
Q  144 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-t 242  Q
    |||||||||| | |||||||| ||||||||| ||||||||||||||||||||||||| ||||||| |||||||||| ||||||||||    ||| ||| |    
T  39460992 taaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtctcaccattattggtgtattgtacgcagcct----tactctgtt 39461087  T
Q  243 ttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    ||||||||||||| | ||||| |||||||| ||||||| | |||||||| |||||||||||||||||||||||||||    
T  39461088 ttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtctcatgacaacaactttaccagttgcgcc 39461164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 145 - 319
Target Start/End: Complemental strand, 35261815 - 35261646
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttt 244  Q
    ||||||||| | |||||||| ||||||||| |||||||||||||| |||||||||||||||||||  |||||||| |||||| ||||    |||||||||    
T  35261815 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtccaggaaggggtcccaccattt--ggtgtattgtacgcaacctt----accctgttt 35261722  T
Q  245 tt-acacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    || ||||||||||| ||||| ||| |||| ||||||| | || |||||||||||||||||||||||||||||||||    
T  35261721 tttacacaagagactgtttccagggcttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgcc 35261646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 157 - 319
Target Start/End: Original strand, 12670261 - 12670416
Alignment:
Q  157 cggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttttacacaagaga 256  Q
    |||||||| | ||||||| |||| |||||||||||||||||||||||||||||  |||||||| |||||||||||    |||||||||| |||||||||     
T  12670261 cggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccattt--ggtgtattgtacgcagcctt----accctgtttt-acacaagagg 12670353  T
Q  257 ccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    | ||||| |||||||| ||||||| | ||||||||||||||||||||||||||||||||||||    
T  12670354 ctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgcc 12670416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 157 - 317
Target Start/End: Original strand, 21070708 - 21070868
Alignment:
Q  157 cggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttttacacaagaga 256  Q
    |||||||| ||| ||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| ||     | |||||| |||||||     
T  21070708 cggtgcactaaaactcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctttttttttttatacaagagg 21070807  T
Q  257 ccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcg 317  Q
    | ||||| |||||||| ||||||| | ||||||||||||||||||||||||||| ||||||    
T  21070808 ctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacccgttgcg 21070868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 145 - 316
Target Start/End: Original strand, 28817625 - 28817791
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttt 244  Q
    ||||||||| | || ||||| ||||||||| |||||||||||||||||||||||||||||||||   |||||||| |||||||||||    |||||||||    
T  28817625 aaaagggcaacccgatgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattg--ggtgtattgtacgcagcctt----accctgttt 28817718  T
Q  245 t-tacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgc 316  Q
    | |||||||||| | ||||| |||||||| ||||||| | || ||||||||||||||||||||||||||||||    
T  28817719 tttacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgc 28817791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 144 - 319
Target Start/End: Complemental strand, 36720933 - 36720763
Alignment:
Q  144 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtt 243  Q
    |||||||||| |  ||||||| |||||| || ||||||||||||||||||||||||||||||||||  |||||||| |||||||||||    ||||||||    
T  36720933 taaaagggcaaccgggtgcactaaagcttccgcatacgcagggtccgggaaggggtcccaccattt--ggtgtattgtacgcagcctt----accctgtt 36720840  T
Q  244 ttt-acacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    ||| ||||||||| | ||||| |||||||| ||||||| | || |||||||||||||||||||||||||||| ||||    
T  36720839 ttttacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttacgcc 36720763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 157 - 319
Target Start/End: Original strand, 7136538 - 7136697
Alignment:
Q  157 cggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccct-gtttttacacaagag 255  Q
    |||||||| ||||||||| |||| || ||||||||||||||||||||||||| |||||||||| ||||||||||    |||||| |||||||||||||||    
T  7136538 cggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagcct----taccctggtttttacacaagag 7136633  T
Q  256 accgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
       ||||| |||||||| |||| || | || |||||||||||||||||||||||||||||||||    
T  7136634 gttgtttccaggacttgaacccatgaccttccagtcacatgacaacaactttaccagttgcgcc 7136697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 157 - 317
Target Start/End: Original strand, 20284080 - 20284239
Alignment:
Q  157 cggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt-ccctaccctgtttttacacaagag 255  Q
    |||||||| ||| ||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| ||||    | |||||| |||||||    
T  20284080 cggtgcactaaaactcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccct--tttttttttatacaagag 20284177  T
Q  256 accgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcg 317  Q
     | ||||| |||||||| ||||||| | ||||||||||||||||||||||||||| ||||||    
T  20284178 gctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacccgttgcg 20284239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 145 - 319
Target Start/End: Original strand, 30454096 - 30454263
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttt 244  Q
    ||||||||| | |||||||| | ||||||| |||| ||||||||||||||||||||||||||  ||||||||||  ||||||||||    |||| || ||    
T  30454096 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccacca--tttggtgtatcgtacgcagcct----taccttg-tt 30454188  T
Q  245 ttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    ||||||||||| | ||||| |||||||| ||||||| | ||||||||||||||||||||||||||||||||||||    
T  30454189 ttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgcc 30454263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 145 - 319
Target Start/End: Complemental strand, 6760960 - 6760789
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-tt 243  Q
    ||||||||| | |||||||| ||||||||| |||| || ||||||| ||||||||||||||||| |||||||||| |||| |||||    ||||||| ||    
T  6760960 aaaagggcaacccggtgcactaaagctcccgcatatgcggggtccgagaaggggtcccaccattattggtgtattgtacgaagcct----taccctgttt 6760865  T
Q  244 tttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    |||||||||||| | ||||| |||||||| ||||||| | ||  ||||| ||||||||||||||||||||||||||    
T  6760864 tttacacaagaggctgtttccaggacttgaacccgtgaccttctagtcatatgacaacaactttaccagttgcgcc 6760789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 147 - 313
Target Start/End: Complemental strand, 45071398 - 45071238
Alignment:
Q  147 aagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttttt 246  Q
    ||||||| | ||||||||  |||||||| |||||||| |||||||||||||||||||||||||  |||||||| |||||||||||    |||||||||||    
T  45071398 aagggcaacccggtgcactgaagctcccgcatacgcaaggtccgggaaggggtcccaccattt--ggtgtattgtacgcagcctt----accctgttttt 45071305  T
Q  247 acacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagt 313  Q
    ||||||||| | ||||| || ||||| ||||||| | || || ||||||||||||||||||||||||    
T  45071304 acacaagaggctgtttccagaacttgaacccgtgaccttacaatcacatgacaacaactttaccagt 45071238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 146 - 319
Target Start/End: Complemental strand, 17823711 - 17823543
Alignment:
Q  146 aaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-ttt 244  Q
    |||||||| | |||||||| ||||||||  |||| ||||||| ||||||||||| |||||||||  |||||||||||||||| |||    | |||| |||    
T  17823711 aaagggcaacccggtgcactaaagctcctgcatatgcagggttcgggaaggggttccaccattt--ggtgtattttacgcagtctt----atcctggttt 17823618  T
Q  245 ttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    ||||||||||| | ||||| |||||||| ||||||| | |||| |||||||||||||||||||||||||||||||    
T  17823617 ttacacaagaggctgtttccaggacttgaacccgtgacctttcggtcacatgacaacaactttaccagttgcgcc 17823543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 144 - 319
Target Start/End: Complemental strand, 44530286 - 44530116
Alignment:
Q  144 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-t 242  Q
    ||||||| || | |||||||| ||||||||| |||||||||||||| ||||||||||||||||  ||||||||||| ||||||||||    ||||||| |    
T  44530286 taaaaggtcaacccggtgcactaaagctcccgcatacgcagggtccaggaaggggtcccacca--tttggtgtattgtacgcagcct----taccctgtt 44530193  T
Q  243 ttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    |||||||||||||   ||||| | |||||| ||||||| | ||  |||||||||||| |||||||||||||||||||    
T  44530192 ttttacacaagaggttgtttccaagacttgaacccgtgaccttctagtcacatgacagcaactttaccagttgcgcc 44530116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 165 - 309
Target Start/End: Original strand, 24365078 - 24365218
Alignment:
Q  165 caaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg--tttttacacaagagaccgttt 262  Q
    |||||||||| |||||||||||||||||||||||||||||||  ||||||||||| | ||||||||    |||||||  |||||||||||||| | ||||    
T  24365078 caaagctcccacatacgcagggtccgggaaggggtcccacca--tttggtgtattgttcgcagcct----taccctgattttttacacaagaggctgttt 24365171  T
Q  263 ctaggacttggacccgtgtcgtttcagtcacatgacaacaactttac 309  Q
    ||||| |||| ||||||| | ||| ||||||||||||||||||||||    
T  24365172 ctagggcttgaacccgtgacattttagtcacatgacaacaactttac 24365218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 148 - 319
Target Start/End: Original strand, 44781506 - 44781673
Alignment:
Q  148 agggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgt-tttt 246  Q
    |||||||| | |||||| ||||||||| ||||||||||||| |||| ||||||||| ||||||||||||||| ||| ||||||    |||||||| ||||    
T  44781506 agggcagcacagtgcactaaagctcccgcatacgcagggtctgggacggggtcccaacatttttggtgtattgtacacagcct----taccctgtctttt 44781601  T
Q  247 acacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    |||||||||   ||||| |||||||| |||||||   |||||||||| |||||||||||||||| ||||||||    
T  44781602 acacaagaggttgtttccaggacttgaacccgtgaactttcagtcacgtgacaacaactttacc-gttgcgcc 44781673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 157 - 319
Target Start/End: Original strand, 18164771 - 18164927
Alignment:
Q  157 cggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttttacacaagaga 256  Q
    |||||||| ||||||||| |||||||||||||||||||  |||| || |   ||||||||||| |||||| |||    |||||||||||||||||||||     
T  18164771 cggtgcactaaagctcccgcatacgcagggtccgggaaatggtcacatc--ctttggtgtattgtacgcaacct----taccctgtttttacacaagagg 18164864  T
Q  257 ccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    | ||||| |||||||| ||||||| | ||||||||||||||||||||||| ||| ||||||||    
T  18164865 ctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaacttcaccggttgcgcc 18164927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 169 - 319
Target Start/End: Original strand, 20869523 - 20869664
Alignment:
Q  169 gctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttttacacaagagaccgtttctagga 268  Q
    |||||| |||| |||||||||||||||||||| ||||    |||||||||| ||| |||||||    |||||||||| ||||||||| | ||||| ||||    
T  20869523 gctcccgcatatgcagggtccgggaaggggtctcacc----ttggtgtattgtacacagcctt----accctgtttt-acacaagaggctgtttccagga 20869613  T
Q  269 cttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    |||| ||||||| | ||||||||||||||||||||||||||||||||||||    
T  20869614 cttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgcc 20869664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 157 - 319
Target Start/End: Original strand, 29521696 - 29521853
Alignment:
Q  157 cggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttttt-acacaagag 255  Q
    |||||||| ||||||||| ||||||||||||| |||| ||| |||||||||||  |||||||| |||||||||||    ||||||||||| | |||||||    
T  29521696 cggtgcactaaagctcccgcatacgcagggtctgggatgggttcccaccattt--ggtgtattgtacgcagcctt----accctgttttttaaacaagag 29521789  T
Q  256 accgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
     | ||||| |||||||| ||||||| | || |||||||| ||||||||||||| ||||||||||    
T  29521790 gctgtttccaggacttgaacccgtgaccttccagtcacacgacaacaactttatcagttgcgcc 29521853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 144 - 311
Target Start/End: Complemental strand, 26954272 - 26954107
Alignment:
Q  144 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-- 241  Q
    |||||||||| | | |||||| ||||||||| |||| ||  |||| ||||||||||||||||||| |||||||||| ||||||||||    |||||||      
T  26954272 taaaagggcaacccagtgcactaaagctcccgcatatgcgaggtctgggaaggggtcccaccattattggtgtattgtacgcagcct----taccctgtt 26954177  T
Q  242 tttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttacca 311  Q
    |||||||||||||| | ||||| |||||||| ||||||| | ||  | ||||||||||||||||||||||    
T  26954176 tttttacacaagaggctgtttccaggacttgaacccgtgaccttctaatcacatgacaacaactttacca 26954107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 158 - 319
Target Start/End: Complemental strand, 2626645 - 2626486
Alignment:
Q  158 ggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttttacacaagagac 257  Q
    |||||||  |||||||| |||| |||||||| |||||||||||||| ||  ||||||||||| ||||||| ||| ||     | |||||||||||||| |    
T  2626645 ggtgcactgaagctcccgcatatgcagggtctgggaaggggtcccatca--tttggtgtattgtacgcagtcttaccctgtttttttttacacaagaggc 2626548  T
Q  258 cgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
     ||||| |||||||| ||||||| | |||| ||||||||||||||||||||||| |||||||    
T  2626547 tgtttccaggacttgaacccgtgacctttcggtcacatgacaacaactttaccaattgcgcc 2626486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 145 - 315
Target Start/End: Complemental strand, 25250660 - 25250493
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcc-ttccctaccctgtt 243  Q
    ||||||||| | |||||||| ||| ||||| |||| || |||| |||||||||||||||||||| |||||||||| ||||||||| | |||||     ||    
T  25250660 aaaagggcaacccggtgcactaaatctcccgcatatgcggggttcgggaaggggtcccaccattattggtgtattgtacgcagccatacccta----ttt 25250565  T
Q  244 tttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttg 315  Q
    ||||||||| || | ||||| |||||||| ||  ||| | || |||||||||||||||||||||||||||||    
T  25250564 tttacacaataggctgtttccaggacttgaacatgtgaccttccagtcacatgacaacaactttaccagttg 25250493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 144 - 317
Target Start/End: Complemental strand, 12626027 - 12625858
Alignment:
Q  144 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-- 241  Q
    |||||||||| | |||||||| ||||||||| |||||||||||||||||| ||||||||||||  ||||||||||| || |||| ||    |||||||      
T  12626027 taaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggagggggtcccacca--tttggtgtattgtatgcagtct----taccctgtt 12625934  T
Q  242 tttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcg 317  Q
    ||||||||||||||   ||||| ||||||||  |||||| | |   ||||||| ||||||||||||||||||||||    
T  12625933 tttttacacaagaggttgtttccaggacttgagcccgtgacctacaagtcacacgacaacaactttaccagttgcg 12625858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 166 - 316
Target Start/End: Complemental strand, 24245564 - 24245421
Alignment:
Q  166 aaagctccctcatacgcagggtccgggaaggggtcccaccattttt-ggtgtattttacgcagccttccctaccctgtttttacacaagagaccgtttct 264  Q
    ||||||||| |||||||||||||| |||||||||||||| |||||| |||| ||| |||| || |||    ||||||||   ||| ||||||| |||||     
T  24245564 aaagctcccgcatacgcagggtccaggaaggggtcccacaattttttggtgcattgtacgtagtctt----accctgtt---acataagagac-gtttcc 24245473  T
Q  265 aggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgc 316  Q
    |||||||| ||||||| | |||||||||||||||||||||||||||||||||    
T  24245472 aggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgc 24245421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 235 - 319
Target Start/End: Complemental strand, 28407467 - 28407383
Alignment:
Q  235 taccctgtttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    ||||||||||||||||||||| | ||||| |||||||| ||||||| | || |||||||||||||||||||||||||||||||||    
T  28407467 taccctgtttttacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgcc 28407383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 145 - 268
Target Start/End: Complemental strand, 20870061 - 20869941
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-tt 243  Q
    ||||||||| | |||||||| ||||||||| |||| || |||||| |||||||||||||||||| |||||||||| ||||||||||    ||||||| ||    
T  20870061 aaaagggcaacccggtgcactaaagctcccgcatatgcggggtcctggaaggggtcccaccattattggtgtattgtacgcagcct----taccctgttt 20869966  T
Q  244 tttacacaagagaccgtttctagga 268  Q
    |||||||||||||| ||||| ||||    
T  20869965 tttacacaagagactgtttccagga 20869941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 145 - 280
Target Start/End: Original strand, 5135289 - 5135418
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttt 244  Q
    ||||||||||| |||||||| ||||||||  |||||||||||||||||||||||||||||||  ||||||||||| ||| ||||||| ||  | || |||    
T  5135289 aaaagggcagcccggtgcac-aaagctcctgcatacgcagggtccgggaaggggtcccacca--tttggtgtattgtacacagccttacc--ctct-ttt 5135382  T
Q  245 ttacacaagagaccgtttctaggacttggacccgtg 280  Q
    ||||||||||| | ||||| |||||||| |||||||    
T  5135383 ttacacaagaggctgtttccaggacttgaacccgtg 5135418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 145 - 315
Target Start/End: Original strand, 8897763 - 8897928
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt-ccctaccctgtt 243  Q
    ||||||||| |  ||||||  ||||||||| |||| ||||||||||||||||||||||||||  ||||||||||| |||| |||||| |||||     ||    
T  8897763 aaaagggcaaccgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccacca--tttggtgtattgtacgtagccttacccta----ttt 8897856  T
Q  244 tttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttg 315  Q
    |||||||||| |   ||||| |||||||  ||||||| | || | |||||||||||||||||||||||||||    
T  8897857 tttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacatgacaacaactttaccagttg 8897928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 147 - 319
Target Start/End: Original strand, 42083699 - 42083866
Alignment:
Q  147 aagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttttt 246  Q
    ||||||||| |  ||||| ||||||||| | ||| |||||| |||||||||||||||||||||| ||| || | ||||||||||| ||   ||  |||||    
T  42083699 aagggcagcccaatgcactaaagctcccacgtacacagggttcgggaaggggtcccaccatttt-ggtatactgtacgcagccttgcc---ccatttttt 42083794  T
Q  247 acacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    |||||| || | ||||| |||||||| ||||||| | |||||||||| ||||||||| |||||| ||||||||    
T  42083795 acacaaaaggctgtttccaggacttgaacccgtgacctttcagtcacgtgacaacaattttacc-gttgcgcc 42083866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 148 - 231
Target Start/End: Complemental strand, 29877227 - 29877146
Alignment:
Q  148 agggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt 231  Q
    ||||||||  ||||||| || |||||| |||||||||||||||||||||||||||||||  ||||||||||| |||||||||||    
T  29877227 agggcagcctggtgcactaacgctcccgcatacgcagggtccgggaaggggtcccacca--tttggtgtattgtacgcagcctt 29877146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 159 - 231
Target Start/End: Original strand, 17250888 - 17250960
Alignment:
Q  159 gtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt 231  Q
    |||||| |||||||| ||||||||||||| |||||| ||||||||||||| |||||||||| ||||| |||||    
T  17250888 gtgcactaaagctccttcatacgcagggttcgggaaagggtcccaccattattggtgtattgtacgctgcctt 17250960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 157 - 227
Target Start/End: Complemental strand, 16225145 - 16225075
Alignment:
Q  157 cggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcag 227  Q
    |||||||| ||||||||| |||| || |||||||||||||| |||||||||| |||||||||| |||||||    
T  16225145 cggtgcactaaagctcccgcatatgcggggtccgggaagggatcccaccattattggtgtattgtacgcag 16225075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 157 - 226
Target Start/End: Complemental strand, 16013580 - 16013511
Alignment:
Q  157 cggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgca 226  Q
    |||||||| ||||||||| |||| |||||||| ||||||||||| |||||||||| ||||||| ||||||    
T  16013580 cggtgcactaaagctcccgcataggcagggtctgggaaggggtcgcaccatttttagtgtattgtacgca 16013511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 145 - 202
Target Start/End: Complemental strand, 40444902 - 40444845
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtccc 202  Q
    |||||||||||||||||||| ||||||||  |||||||||||||||| ||||||||||    
T  40444902 aaaagggcagctcggtgcactaaagctccaacatacgcagggtccggcaaggggtccc 40444845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 176 - 316
Target Start/End: Complemental strand, 11748406 - 11748269
Alignment:
Q  176 catacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-tttttacacaagagaccgtttctaggacttgga 274  Q
    |||| ||||| | ||||||||||||| ||||||||| || |||| ||||| | ||    ||||||| |||||||| ||||| | ||||| | |||||| |    
T  11748406 catatgcaggattcgggaaggggtcctaccattttttgtatattgtacgctgtct----taccctgctttttacaaaagaggctgtttccaagacttgaa 11748311  T
Q  275 cccgtgtcgtttcagtcacatgacaacaactttaccagttgc 316  Q
    |||||| | |||||||||||||||||||| || |||||||||    
T  11748310 cccgtgacatttcagtcacatgacaacaatttcaccagttgc 11748269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 145 - 209
Target Start/End: Complemental strand, 26102653 - 26102589
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccattt 209  Q
    ||||||||| | |||||||| | ||||||| |||| |||||||||||||||||||||||||||||    
T  26102653 aaaagggcaacccggtgcactagagctcccgcataagcagggtccgggaaggggtcccaccattt 26102589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 144 - 304
Target Start/End: Complemental strand, 31457309 - 31457155
Alignment:
Q  144 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtt 243  Q
    ||||||||||   |||||||| | ||||||| ||||||||||||  |||||||||||| ||||  |||| |||||| ||||||||||    |  ||| ||    
T  31457309 taaaagggcaatccggtgcactagagctcccgcatacgcagggtttgggaaggggtcctacca--tttgatgtattgtacgcagcct----tttcctatt 31457216  T
Q  244 tttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaac 304  Q
    ||||||||||||   ||||  |||||||| ||||||| | |||||| ||||||||||||||    
T  31457215 tttacacaagaggttgtttacaggacttgaacccgtgacctttcagccacatgacaacaac 31457155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 231
Target Start/End: Complemental strand, 5689755 - 5689683
Alignment:
Q  157 cggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt 231  Q
    |||||||| ||||||||| |||||||| ||| ||||||||||| ||||||  ||||||||||| |||||||||||    
T  5689755 cggtgcactaaagctcccacatacgcatggttcgggaaggggttccacca--tttggtgtattgtacgcagcctt 5689683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 209
Target Start/End: Complemental strand, 28407538 - 28407475
Alignment:
Q  146 aaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccattt 209  Q
    |||||||| | |||||||  ||||||||| |||||| |||||||||||||||||||||||||||    
T  28407538 aaagggcaacccggtgcagtaaagctcccgcatacgtagggtccgggaaggggtcccaccattt 28407475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 206
Target Start/End: Complemental strand, 27508034 - 27507985
Alignment:
Q  157 cggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccacca 206  Q
    |||||||| ||||||||| |||||||||||| ||||||||||||||||||    
T  27508034 cggtgcactaaagctcccgcatacgcagggttcgggaaggggtcccacca 27507985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 43942417 - 43942376
Alignment:
Q  190 gggaaggggtcccaccatttttggtgtattttacgcagcctt 231  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  43942417 gggaaggggtcccaccatttttggtgtattgtacgcagcctt 43942376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 145 - 209
Target Start/End: Original strand, 35107310 - 35107374
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccattt 209  Q
    ||||||||| | |||||||| |||||| || ||||| ||| ||||||||||||||||||||||||    
T  35107310 aaaagggcaacccggtgcactaaagcttccgcatacacagcgtccgggaaggggtcccaccattt 35107374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 157 - 231
Target Start/End: Original strand, 8483949 - 8484021
Alignment:
Q  157 cggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt 231  Q
    |||||| | ||||||||| ||||||||||||| |||| ||||||||||||   |||||||||| |||||||||||    
T  8483949 cggtgccctaaagctcccgcatacgcagggtctgggatggggtcccacca--attggtgtattgtacgcagcctt 8484021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 187 - 300
Target Start/End: Original strand, 23000260 - 23000365
Alignment:
Q  187 tccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttttacacaagagaccgtttctaggacttggacccgtgtcgttt 286  Q
    |||||||||||||||||||||||  |||||||| || | | ||||    ||| |||||||||||||||| | ||||| |||||||  ||||||| | |||    
T  23000260 tccgggaaggggtcccaccattt--ggtgtattgtatggaacctt----accgtgtttttacacaagaggctgtttccaggactt--acccgtgaccttt 23000351  T
Q  287 cagtcacatgacaa 300  Q
    ||||||||||||||    
T  23000352 cagtcacatgacaa 23000365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 195
Target Start/End: Original strand, 27468091 - 27468141
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaag 195  Q
    ||||||||| | |||||||| ||||||||| ||||||||||||||||||||    
T  27468091 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaag 27468141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 157 - 231
Target Start/End: Original strand, 44742529 - 44742602
Alignment:
Q  157 cggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt 231  Q
    |||||||| || |||||| ||| || |||||||  ||||||||||||||| |||||||||||| |||||||||||    
T  44742529 cggtgcactaatgctcccgcatccgtagggtccaagaaggggtcccacca-ttttggtgtattgtacgcagcctt 44742602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 159 - 231
Target Start/End: Complemental strand, 19729462 - 19729392
Alignment:
Q  159 gtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt 231  Q
    |||||| | |||||||  ||| ||||||||||||||||||||||||||  ||||||||||| ||| |||||||    
T  19729462 gtgcactagagctcccgtatatgcagggtccgggaaggggtcccacca--tttggtgtattgtacacagcctt 19729392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 158 - 310
Target Start/End: Complemental strand, 22598279 - 22598133
Alignment:
Q  158 ggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttttt-acacaagaga 256  Q
    ||||||| |||| |||| |||||||| |||||||||| ||||| ||||| ||  |||||||| |||  ||||||    ||||||||||| |||||||||     
T  22598279 ggtgcactaaag-tcccgcatacgcaaggtccgggaaagggtctcaccaatt--ggtgtattgtacatagcctt----accctgttttttacacaagagg 22598187  T
Q  257 ccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttacc 310  Q
      ||||| |||| ||| ||||||| | |||||||||  ||||||||||||||||    
T  22598186 ttgtttccaggatttgaacccgtgacctttcagtcatgtgacaacaactttacc 22598133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 183 - 307
Target Start/End: Complemental strand, 35106022 - 35105902
Alignment:
Q  183 agggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttttacacaagagaccgtttctaggacttggacccgtgtc 282  Q
    ||||||| ||||| |||||||||||| | |||||||| ||||||||||| |  || || |||| |||||||||   ||||| |||||||| ||||||| |    
T  35106022 agggtccaggaagaggtcccaccattct-ggtgtattgtacgcagccttac--actctctttt-acacaagaggttgtttccaggacttgaacccgtgac 35105927  T
Q  283 gtttcagtcacatgacaacaacttt 307  Q
     |||||| ||| |||||||||||||    
T  35105926 ctttcagccacgtgacaacaacttt 35105902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 231
Target Start/End: Complemental strand, 26457851 - 26457781
Alignment:
Q  157 cggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt 231  Q
    |||||||| |||||||||||||||||| |||| ||  |||||||||||||   |||||||||| |||||||||||    
T  26457851 cggtgcactaaagctccctcatacgcaaggtcagg--aggggtcccacca--attggtgtattgtacgcagcctt 26457781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 319
Target Start/End: Original strand, 14018003 - 14018136
Alignment:
Q  181 gcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttt-tacacaagagaccgtttctaggacttggacccgt 279  Q
    ||||||||| ||||| |||||||||| ||| | |||||| ||||||| ||     |||||||||| |||||||||||| ||||| | |||||| |||| |    
T  14018003 gcagggtccaggaagtggtcccaccaatttag-tgtattgtacgcagtctc----accctgttttttacacaagagactgtttccaagacttgaacccat 14018097  T
Q  280 gtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    | | ||||| |||| |||||||||| ||||| ||||||||    
T  14018098 gacctttcaatcacgtgacaacaacattacc-gttgcgcc 14018136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 213
Target Start/End: Complemental strand, 18595959 - 18595906
Alignment:
Q  160 tgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttgg 213  Q
    ||||| ||| ||||| ||||| |||||||||||||||||||| | |||||||||    
T  18595959 tgcactaaaactcccgcatacacagggtccgggaaggggtcctatcatttttgg 18595906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 307
Target Start/End: Original strand, 30962864 - 30962929
Alignment:
Q  242 tttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttt 307  Q
    |||||||||||||| | ||||| |||||||| |  |||| | ||||| ||||||||||||||||||    
T  30962864 tttttacacaagaggctgtttccaggacttgaagtcgtgacctttcaatcacatgacaacaacttt 30962929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 319
Target Start/End: Original strand, 40605044 - 40605073
Alignment:
Q  290 tcacatgacaacaactttaccagttgcgcc 319  Q
    ||||||||||||||||||||||||||||||    
T  40605044 tcacatgacaacaactttaccagttgcgcc 40605073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 157 - 280
Target Start/End: Complemental strand, 389769 - 389649
Alignment:
Q  157 cggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttttt---acacaag 253  Q
    |||||||| ||||||| | ||||||||||||| || ||||| ||||| ||  ||||||||||| |||||| |||    ||||||||||||   |||||||    
T  389769 cggtgcactaaagctctcgcatacgcagggtcaggaaagggatcccatca--tttggtgtattgtacgcaacct----taccctgtttttttgacacaag 389676  T
Q  254 agaccgtttctaggacttggacccgtg 280  Q
    ||   ||||| |||||||| |||||||    
T  389675 agggtgtttccaggacttgaacccgtg 389649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 317
Target Start/End: Original strand, 23286431 - 23286459
Alignment:
Q  289 gtcacatgacaacaactttaccagttgcg 317  Q
    |||||||||||||||||||||||||||||    
T  23286431 gtcacatgacaacaactttaccagttgcg 23286459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 147 - 207
Target Start/End: Original strand, 36486567 - 36486627
Alignment:
Q  147 aagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccat 207  Q
    ||||||| | ||| |||| ||||||||  |||||||| ||||||||||| |||||||||||    
T  36486567 aagggcaacccggggcactaaagctcctgcatacgcaaggtccgggaagaggtcccaccat 36486627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 93; Significance: 3e-45; HSPs: 66)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 144 - 315
Target Start/End: Original strand, 13628788 - 13628957
Alignment:
Q  144 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtt 243  Q
    |||||||||| | |||||||| ||||||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||    |||||||||    
T  13628788 taaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagcct----taccctgtt 13628883  T
Q  244 t-ttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaac-tttaccagttg 315  Q
    | ||||||||||| | ||||| |||||||| ||||||| | ||||||||||||||||||||| |||||||||||    
T  13628884 tcttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaacttttaccagttg 13628957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 145 - 319
Target Start/End: Complemental strand, 26869864 - 26869696
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttt 244  Q
    ||||||||| | |||||||||||||||||| |||||||| ||||||| |||||||||||||||||  |||||||| |||||||||||    |||||||||    
T  26869864 aaaagggcaacccggtgcaccaaagctcccgcatacgcatggtccggcaaggggtcccaccattt--ggtgtattgtacgcagcctt----accctgttt 26869771  T
Q  245 ttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    |||||| |||| | ||||| |||||||| ||| ||| | ||||||||||||||||||||||||||||||||||||    
T  26869770 ttacaccagaggctgtttccaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 26869696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 166 - 319
Target Start/End: Original strand, 46421055 - 46421205
Alignment:
Q  166 aaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-tttttacacaagagaccgtttct 264  Q
    ||||||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||    ||||||| |||||||||||||| | |||||     
T  46421055 aaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagcct----taccctgttttttacacaagaggctgtttcc 46421150  T
Q  265 aggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    |||||||| ||||||| | ||| ||||||||||||||||||||||||||||||||    
T  46421151 aggacttgaacccgtgacctttaagtcacatgacaacaactttaccagttgcgcc 46421205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 143 - 319
Target Start/End: Original strand, 29366717 - 29366890
Alignment:
Q  143 ctaaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg- 241  Q
    ||||||||||| | | |||||| ||||||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||    |||||||     
T  29366717 ctaaaagggcaacccagtgcactaaagctcccacatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagcct----taccctgt 29366812  T
Q  242 tttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    |||||| ||||||| | ||||| |||||||| ||||||| | ||| ||||||||||||||||||||||||||| ||||    
T  29366813 tttttatacaagaggctgtttccaggacttgaacccgtgaccttttagtcacatgacaacaactttaccagttacgcc 29366890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 145 - 319
Target Start/End: Original strand, 13730601 - 13730772
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-tt 243  Q
    ||||||||| | |||||||| ||||||||| |||| || ||||||||||||||||||||||||| |||||||||| ||| ||||||    ||||||| ||    
T  13730601 aaaagggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacacagcct----taccctgttt 13730696  T
Q  244 tttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    |||||||||||| | ||||| |||||||| ||||||| | || |||||||||||||||||||||||||||||||||    
T  13730697 tttacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgcc 13730772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 166 - 319
Target Start/End: Original strand, 8247707 - 8247857
Alignment:
Q  166 aaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttt-tacacaagagaccgtttct 264  Q
    ||||||||| ||||||||||||||||||||| ||||||||||| |||||||||| |||||| ||||    |||||||||| |||||||||| | |||||     
T  8247707 aaagctcccgcatacgcagggtccgggaaggagtcccaccattattggtgtattgtacgcaacctt----accctgttttttacacaagaggctgtttcc 8247802  T
Q  265 aggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    |||||||| ||||||| | ||||||||||||||||||||||||||||||||||||    
T  8247803 aggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgcc 8247857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 145 - 319
Target Start/End: Original strand, 40272811 - 40272980
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-tt 243  Q
    ||||||||| | |||||||| ||||||||| |||||||||||||||||||||||||||||||  ||||||||||| ||||||||||    ||||||| ||    
T  40272811 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccacca--tttggtgtattgtacgcagcct----taccctgttt 40272904  T
Q  244 tttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    ||||||||||||   ||||| |||||||| |||| || | || |||||||||||||||||||||||||||||||||    
T  40272905 tttacacaagaggttgtttccaggacttgaacccatgaccttccagtcacatgacaacaactttaccagttgcgcc 40272980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 144 - 319
Target Start/End: Complemental strand, 16735599 - 16735430
Alignment:
Q  144 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtt 243  Q
    |||||||||| | | ||||||  ||||| || ||||||||| ||||||||||||||||||||||||  |||||||| |||||||||||    ||||||||    
T  16735599 taaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccattt--ggtgtattgtacgcagcctt----accctgtt 16735506  T
Q  244 tttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    |||  ||||||| | ||||| |||||||| ||||||| |||| |||||||||||||||||||||||||||||||||    
T  16735505 tttctacaagaggctgtttcgaggacttgaacccgtgacgttacagtcacatgacaacaactttaccagttgcgcc 16735430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 145 - 319
Target Start/End: Complemental strand, 1217246 - 1217079
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttt 244  Q
    ||||||||| | |||||||| | ||||||| |||| |||||||||||||||||||||| ||||||  |||||||| |||||||||||    |||||||||    
T  1217246 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccgccattt--ggtgtattgtacgcagcctt----accctgttt 1217153  T
Q  245 ttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    | ||||||||| | ||||| |||||||| ||||||| | ||||||| ||||||| ||||||||||||||||||||    
T  1217152 t-acacaagaggctgtttccaggacttgaacccgtgacctttcagtgacatgactacaactttaccagttgcgcc 1217079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 147 - 319
Target Start/End: Original strand, 22122918 - 22123083
Alignment:
Q  147 aagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttttt 246  Q
    ||||||| | |||||||| | ||||| | |||| |||||||||||||||||||||||||||||  |||||||| |||||||||||    ||||||||||     
T  22122918 aagggcaacccggtgcactagagctctcgcatatgcagggtccgggaaggggtcccaccattt--ggtgtattgtacgcagcctt----accctgtttt- 22123010  T
Q  247 acacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    ||||||||||| ||||| |||||||| ||||| | | |||||||||||||||||||| ||||||||| |||||    
T  22123011 acacaagagactgtttccaggacttgaacccgcgacctttcagtcacatgacaacaaatttaccagtggcgcc 22123083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 147 - 319
Target Start/End: Complemental strand, 22609921 - 22609756
Alignment:
Q  147 aagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttttt 246  Q
    ||||||| | ||||||||  |||||||| |||||||| |||||||||||||||||||||||||  |||||||| |||||||||||    |||||||||||    
T  22609921 aagggcaacccggtgcactgaagctcccgcatacgcaaggtccgggaaggggtcccaccattt--ggtgtattgtacgcagcctt----accctgttttt 22609828  T
Q  247 acacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    ||||||||| | ||||| | |||||| ||||||  | || |||||||||||||||||||||||| ||||||||    
T  22609827 acacaagaggctgtttccaagacttgaacccgttaccttacagtcacatgacaacaactttacc-gttgcgcc 22609756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 145 - 309
Target Start/End: Original strand, 34420642 - 34420802
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-tt 243  Q
    |||||||||||   |||||| ||||||||| |||||||| |||||||||||||||||||||| |||||||||||  ||||||||||    ||||||| ||    
T  34420642 aaaagggcagccatgtgcactaaagctcccacatacgcaaggtccgggaaggggtcccacca-ttttggtgtatggtacgcagcct----taccctgttt 34420736  T
Q  244 tttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttac 309  Q
    |||||||||||| | ||||| |||||||| ||||||| | |||||||||| |||||||||||||||    
T  34420737 tttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacgtgacaacaactttac 34420802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 145 - 319
Target Start/End: Original strand, 5173718 - 5173889
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttt 244  Q
    ||||||||| | |||||||| ||||||||| |||||||| |||||||||||||| ||||||||||||||||||||  | ||| |||    |||  |||||    
T  5173718 aaaagggcaacccggtgcactaaagctcccgcatacgcaaggtccgggaaggggccccaccatttttggtgtattgcatgcaacct----tactttgttt 5173813  T
Q  245 ttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaac-tttaccagttgcgcc 319  Q
    |||||||||||   ||||| |||||||| ||||||| | ||||||||||||||||||||| ||||| |||||||||    
T  5173814 ttacacaagaggttgtttccaggacttgaacccgtgacctttcagtcacatgacaacaacttttacgagttgcgcc 5173889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 146 - 315
Target Start/End: Complemental strand, 39203671 - 39203509
Alignment:
Q  146 aaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttt 245  Q
    |||||||| | |||||||| ||||||||| |||| ||| |||||||||||||||||||||||||  |||||||| |||||| ||||    ||||||||||    
T  39203671 aaagggcaacccggtgcactaaagctcccgcatatgcaaggtccgggaaggggtcccaccattt--ggtgtattgtacgcaacctt----accctgtttt 39203578  T
Q  246 tacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttg 315  Q
     ||||||||| | ||||| |||||||| ||| ||| | |||||||||||||||||||||||||| |||||    
T  39203577 -acacaagaggctgtttcaaggacttgaacctgtgacctttcagtcacatgacaacaactttacaagttg 39203509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 156 - 317
Target Start/End: Original strand, 6411832 - 6411987
Alignment:
Q  156 tcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttttacacaagag 255  Q
    ||||||||| ||||||||| |||||||| |||| |||||||||||||| |||||  |||||||| |||||||||||    ||||||||||||||||||||    
T  6411832 tcggtgcactaaagctcccgcatacgcaaggtctgggaaggggtcccatcattt--ggtgtattgtacgcagcctt----accctgtttttacacaagag 6411925  T
Q  256 accgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcg 317  Q
     | ||||  | |||||| |||| || | | ||||| ||||||||||||||||||||||||||    
T  6411926 gctgtttacaagacttgaacccatgacctatcagttacatgacaacaactttaccagttgcg 6411987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 145 - 300
Target Start/End: Complemental strand, 516570 - 516417
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccacca-tttttggtgtattttacgcagccttccctaccctg-t 242  Q
    ||||||||| | |||||||| ||||||||| ||||||||||||| ||||||||||||| ||| |||||||| |||| | ||||||||    ||||||| |    
T  516570 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtcggggaaggggtcccgccattttttggtttattgtgcgcagcct----taccctgtt 516475  T
Q  243 ttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaa 300  Q
    ||||||||||||| | ||||| |||||||| ||||||| | |||||||||||||||||    
T  516474 ttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaa 516417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 148 - 319
Target Start/End: Complemental strand, 26573282 - 26573117
Alignment:
Q  148 agggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttttt- 246  Q
    ||||||||  ||||||| ||||||| | |||||||||||||||||| |||||||||||| ||  |||||||| |||||||||||    |||||||||||     
T  26573282 agggcagcctggtgcactaaagctcacgcatacgcagggtccgggatggggtcccaccaatt--ggtgtattgtacgcagcctt----accctgtttttt 26573189  T
Q  247 acacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    ||||| ||| | ||||| |||||||| ||||||| | |||||||||| |||||||||||||||| ||||||||    
T  26573188 acacaggaggctgtttccaggacttgaacccgtgacctttcagtcacgtgacaacaactttacc-gttgcgcc 26573117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 158 - 280
Target Start/End: Original strand, 10795435 - 10795554
Alignment:
Q  158 ggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgt-ttttacacaagaga 256  Q
    |||||||  |||||||| |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||    |||||||| |||||||||||||     
T  10795435 ggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagcct----taccctgtcttttacacaagagg 10795530  T
Q  257 ccgtttctaggacttggacccgtg 280  Q
    | ||||| |||||||| |||||||    
T  10795531 ctgtttccaggacttgaacccgtg 10795554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 145 - 319
Target Start/End: Original strand, 52926218 - 52926378
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttt 244  Q
    ||||||||| | |||||| | ||||||||| ||||||||||||||||||||| |||||||||  ||||||||||| ||||||||||| |               
T  52926218 aaaagggcaacccggtgcgctaaagctcccgcatacgcagggtccgggaaggtgtcccacca--tttggtgtattgtacgcagccttac----------- 52926304  T
Q  245 ttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
     |||||||||| | ||||| |||||||| ||||||| | || |||||||||||||||||||||||||||||||||    
T  52926305 -tacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgcc 52926378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 166 - 319
Target Start/End: Complemental strand, 9607342 - 9607192
Alignment:
Q  166 aaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttttt-acacaagagaccgtttct 264  Q
    ||||||||| |||| || ||||| |||||||||||||| |||| |||||||||| |||||||||||    ||||||||||| || |||||| | |||||     
T  9607342 aaagctcccgcatatgcggggtctgggaaggggtcccaacattattggtgtattctacgcagcctt----accctgttttttacgcaagaggctgtttcc 9607247  T
Q  265 aggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    |||||||| |||  || | |||||||||||||||||||||||||| |||||||||    
T  9607246 aggacttgaaccgatgacctttcagtcacatgacaacaactttacaagttgcgcc 9607192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 217 - 319
Target Start/End: Original strand, 10870021 - 10870119
Alignment:
Q  217 attttacgcagccttccctaccctgtttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgc 316  Q
    |||||||||||||||    |||||||||||||||||||| | ||||| |||||||| ||||||| | |||||||||||||||||||||||||||||||||    
T  10870021 attttacgcagcctt----accctgtttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgc 10870116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 145 - 310
Target Start/End: Original strand, 53996564 - 53996725
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-tt 243  Q
    ||||||||||| |||||||| ||||||||| ||||||||| ||| ||||||||||||||||| |||||||||||| || |||||||    ||||||| ||    
T  53996564 aaaagggcagcccggtgcactaaagctcccacatacgcagtgtcagggaaggggtcccacca-ttttggtgtattgtaagcagcct----taccctgttt 53996658  T
Q  244 tttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttacc 310  Q
    ||||||||||||   ||||| | |||||| || |||| | ||||||||| |||||||||| ||||||    
T  53996659 tttacacaagaggttgtttccacgacttgaacacgtgacctttcagtcaaatgacaacaaatttacc 53996725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 157 - 319
Target Start/End: Original strand, 7696903 - 7697053
Alignment:
Q  157 cggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttttacacaagaga 256  Q
    |||||||| | ||||||| |||| |||| |||||||||||||     ||||||  |||||||| |||||||||||    |||||||||| ||||||||||    
T  7696903 cggtgcactagagctcccacatatgcagtgtccgggaagggg-----ccattt--ggtgtattgtacgcagcctt----accctgtttt-acacaagaga 7696990  T
Q  257 ccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    | ||||| |||||||| ||||||| | ||| ||||||||||||||||||||||||||||||||    
T  7696991 ctgtttccaggacttgaacccgtgaccttttagtcacatgacaacaactttaccagttgcgcc 7697053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 145 - 309
Target Start/End: Complemental strand, 25944628 - 25944468
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttt 244  Q
    |||||||||||  ||||| | ||||||||| ||||||||||||| ||||||||||||||||| |||||||||||| ||| ||||||| |   ||   |||    
T  25944628 aaaagggcagcctggtgcgctaaagctcccacatacgcagggtcagggaaggggtcccacca-ttttggtgtattgtactcagccttgc---ccagtttt 25944533  T
Q  245 ttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttac 309  Q
    |||||| |||| | ||||| |||||||| |||| || | |||||||||| |||||||||||||||    
T  25944532 ttacacgagaggcggtttccaggacttgaacccatgacctttcagtcacgtgacaacaactttac 25944468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 143 - 319
Target Start/End: Original strand, 12914032 - 12914203
Alignment:
Q  143 ctaaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgt 242  Q
    ||||||||||| | |||||||   |||||||| |||| |||||||| ||||||||||| ||||||||  |||||||| ||||| |||||    |||||||    
T  12914032 ctaaaagggcaacccggtgcattgaagctcccgcatatgcagggtctgggaaggggtctcaccattt--ggtgtattgtacgccgcctt----accctgt 12914125  T
Q  243 ttt-tacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    ||| |||||||||| | ||||| |||||||| ||  ||| | |||| ||||||| |||||||||||||||||||||||    
T  12914126 tttttacacaagaggctgtttccaggacttgaacttgtgacctttcggtcacattacaacaactttaccagttgcgcc 12914203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 146 - 231
Target Start/End: Original strand, 45786214 - 45786299
Alignment:
Q  146 aaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt 231  Q
    |||||||| | |||||||| ||||||||  ||| |||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  45786214 aaagggcaacccggtgcactaaagctccagcattcgcagggtccgggaaggggtcccaccatttttggtgtattgtacgcagcctt 45786299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 145 - 231
Target Start/End: Complemental strand, 54484849 - 54484765
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt 231  Q
    ||||||||| | |||||||| ||||||||| |||||||||||||||||||||||||||||||  ||||||||||| |||||||||||    
T  54484849 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccacca--tttggtgtattgtacgcagcctt 54484765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 148 - 231
Target Start/End: Original strand, 353351 - 353434
Alignment:
Q  148 agggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt 231  Q
    |||||| | |||||||| ||||||||| |||| || ||||||||||||||||||||||||| |||||||||| |||||||||||    
T  353351 agggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagcctt 353434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 157 - 272
Target Start/End: Complemental strand, 14987105 - 14986993
Alignment:
Q  157 cggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-tttttacacaagag 255  Q
    |||||||| ||||||||| |||| ||| |||||||||| ||||||||||||| |||||||||| ||||||||||    ||||||| ||||||||||||||    
T  14987105 cggtgcactaaagctcccgcatatgcaaggtccgggaatgggtcccaccattattggtgtattgtacgcagcct----taccctgttttttacacaagag 14987010  T
Q  256 accgtttctaggacttg 272  Q
     | ||||| ||||||||    
T  14987009 gctgtttccaggacttg 14986993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 145 - 231
Target Start/End: Original strand, 34771363 - 34771447
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt 231  Q
    ||||||||||| |||||||| | ||||||| |||| ||||||||||||||||||||||||||  ||||||||||| |||||||||||    
T  34771363 aaaagggcagcccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccacca--tttggtgtattgtacgcagcctt 34771447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 165 - 306
Target Start/End: Original strand, 30928166 - 30928302
Alignment:
Q  165 caaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-tttttacacaagagaccgtttc 263  Q
    |||||||||| |||| |||||||||||||||||||||| |||   |||||||||||||| || |||    |||| || |||||||||||||| | |||||    
T  30928166 caaagctcccacatatgcagggtccgggaaggggtcccgcca--attggtgtattttacacaacct----taccttgttttttacacaagaggctgtttc 30928259  T
Q  264 taggacttggacccgtgtcgtttcagtcacatgacaacaactt 306  Q
     |||||||| ||||||| | ||||||||||||||||| |||||    
T  30928260 caggacttgaacccgtgacctttcagtcacatgacaagaactt 30928302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 147 - 297
Target Start/End: Original strand, 45139479 - 45139624
Alignment:
Q  147 aagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgt-ttt 245  Q
    ||||||||| |||||||| |||| |||| |||||||||| || |||||||||||||||||||||||||||||| || |||||||    |||||||| |||    
T  45139479 aagggcagcccggtgcac-aaagttcccgcatacgcagg-tctgggaaggggtcccaccatttttggtgtattgtatgcagcct----taccctgtgttt 45139572  T
Q  246 tacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatga 297  Q
    ||||||||||   ||||| |  ||||| ||||||| | ||||||||||||||    
T  45139573 tacacaagaggttgtttccaaaacttgaacccgtgacctttcagtcacatga 45139624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 145 - 231
Target Start/End: Original strand, 49013472 - 49013558
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt 231  Q
    ||||||||| | |||||||| ||||||||| | || || ||||||||||||||||||||||||| |||||||||| |||||||||||    
T  49013472 aaaagggcaacccggtgcactaaagctcccgcgtatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagcctt 49013558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 146 - 279
Target Start/End: Complemental strand, 31593004 - 31592878
Alignment:
Q  146 aaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttt 245  Q
    |||||||| | |||||||| | ||||||| |||| |||||||||||||||| |||||||||  ||||||||||| ||||||||||    ||||||| |||    
T  31593004 aaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggagtcccacca--tttggtgtattgtacgcagcct----taccctg-ttt 31592912  T
Q  246 tacacaagagaccgtttctaggacttggacccgt 279  Q
    |||||||||| | ||||| |||||||| ||||||    
T  31592911 tacacaagaggctgtttccaggacttgaacccgt 31592878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 145 - 231
Target Start/End: Complemental strand, 15797378 - 15797294
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt 231  Q
    ||||||||| | |||||||| | ||||||| |||| ||||||||||||||||||||||||||  ||||||||||| |||||||||||    
T  15797378 aaaagggcaacccggtgcactagagctcccacatatgcagggtccgggaaggggtcccacca--tttggtgtattgtacgcagcctt 15797294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 143 - 229
Target Start/End: Original strand, 25517167 - 25517251
Alignment:
Q  143 ctaaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcc 229  Q
    ||||||||||| | |||||||| ||||||||  |||||||||| ||||||||||||||||||||||||  ||||||| |||||||||    
T  25517167 ctaaaagggcaacccggtgcactaaagctccagcatacgcaggatccgggaaggggtcccaccatttt--gtgtattgtacgcagcc 25517251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 166 - 297
Target Start/End: Complemental strand, 33926220 - 33926094
Alignment:
Q  166 aaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttttacacaagagaccgtttcta 265  Q
    ||||||| | |||| ||||||||| |||||||||||||||||| | |||||||| ||| |||||||    |||||||||||||||||||| |  |||| |    
T  33926220 aaagctctcgcatatgcagggtccaggaaggggtcccaccattat-ggtgtattgtacacagcctt----accctgtttttacacaagaggctatttcca 33926126  T
Q  266 ggacttggacccgtgtcgtttcagtcacatga 297  Q
    ||||||| |||| || | ||||||||||||||    
T  33926125 ggacttgaacccatgacctttcagtcacatga 33926094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 196 - 318
Target Start/End: Original strand, 4495714 - 4495831
Alignment:
Q  196 gggtcccaccatttttggtgtattttacgcagccttccctaccctgttttt-acacaagagaccgtttctaggacttggacccgtgtcgtttcagtcaca 294  Q
    ||||||||||||||  |||||||| |||||||||||    ||||||||||| |||||| || |  |||  |||||||| ||||||| | || ||||||||    
T  4495714 gggtcccaccattt--ggtgtattgtacgcagcctt----accctgttttttacacaataggctattttcaggacttgaacccgtgaccttccagtcaca 4495807  T
Q  295 tgacaacaactttaccagttgcgc 318  Q
    ||||||||||||||||||||||||    
T  4495808 tgacaacaactttaccagttgcgc 4495831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 177 - 255
Target Start/End: Complemental strand, 47624167 - 47624095
Alignment:
Q  177 atacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttttacacaagag 255  Q
    |||| |||||||||||||||||||||||||  ||||||||||| ||||||||||    |||||||||||||||||||||    
T  47624167 atacacagggtccgggaaggggtcccacca--tttggtgtattgtacgcagcct----taccctgtttttacacaagag 47624095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 145 - 231
Target Start/End: Original strand, 54374344 - 54374429
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt 231  Q
    |||| ||||||  |||| || ||||||||| |||| |||||||||||||||||||||||||| |||||||| ||| |||||||||||    
T  54374344 aaaatggcagcctggtgaactaaagctcccgcatatgcagggtccgggaaggggtcccacca-ttttggtggattgtacgcagcctt 54374429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 157 - 226
Target Start/End: Original strand, 829453 - 829521
Alignment:
Q  157 cggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgca 226  Q
    |||||||| ||||||||  |||||||||||| |||||||||||||||||| |||||||||||| ||||||    
T  829453 cggtgcactaaagctcctgcatacgcagggttcgggaaggggtcccacca-ttttggtgtattgtacgca 829521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 145 - 209
Target Start/End: Original strand, 24851300 - 24851364
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccattt 209  Q
    ||||||||| | |||||||| ||||||||| |||| ||||| |||||||||||||||||||||||    
T  24851300 aaaagggcaacccggtgcactaaagctcccgcatatgcaggatccgggaaggggtcccaccattt 24851364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 157 - 319
Target Start/End: Original strand, 45948849 - 45949008
Alignment:
Q  157 cggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt-ccctaccctgtttttacacaagag 255  Q
    |||||||| ||||||||| ||||||||||||||| |||||||||||||||   |||||||||| || |||||||| |||||     ||||||||||||||    
T  45948849 cggtgcactaaagctcccgcatacgcagggtccgagaaggggtcccacca--attggtgtattgtatgcagccttacccta----ttttttacacaagag 45948942  T
Q  256 accgtttctaggacttggacccgtgtcgt---ttcagtcacatgacaacaactttaccagttgcgcc 319  Q
       ||||| |||| ||| ||||||| | |   ||||||||||||| |||||||| ||| ||||||||    
T  45948943 gttgtttccaggaattgaacccgtgaccttccttcagtcacatgaaaacaacttcacc-gttgcgcc 45949008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 167 - 319
Target Start/End: Complemental strand, 12525543 - 12525399
Alignment:
Q  167 aagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-tttttacacaagagaccgtttcta 265  Q
    ||||||||  |||| |||||||  |||||| |||||||||||||||||||| ||  ||||||||    ||||||| |||||||||||||| | ||||| |    
T  12525543 aagctcccgtatacacagggtctaggaaggtgtcccaccatttttggtgtactt--cgcagcct----taccctgatttttacacaagaggctgtttcca 12525450  T
Q  266 ggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    ||||| | ||| ||| | ||||||||| |||   ||||||||||||||||||||    
T  12525449 ggactcgaacctgtgacctttcagtcatatg---acaactttaccagttgcgcc 12525399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 210 - 319
Target Start/End: Original strand, 45620890 - 45620996
Alignment:
Q  210 ttggtgtattttacgcagccttccctaccctgtttt--tacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttt 307  Q
    |||||||||| |||||||||||    ||||||||||  |||||||||| | ||||| || ||||| ||||||| | |||||||||| |||||||||||||    
T  45620890 ttggtgtattgtacgcagcctt----accctgtttttttacacaagaggctgtttccagaacttgaacccgtgacctttcagtcacgtgacaacaacttt 45620985  T
Q  308 accagttgcgcc 319  Q
    ||| ||||||||    
T  45620986 acc-gttgcgcc 45620996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 144 - 206
Target Start/End: Complemental strand, 30452954 - 30452892
Alignment:
Q  144 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccacca 206  Q
    |||||||||| | |||||||| | ||||||| |||| ||||||||||||||||||||||||||    
T  30452954 taaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccacca 30452892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 144 - 201
Target Start/End: Original strand, 10484614 - 10484671
Alignment:
Q  144 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcc 201  Q
    |||||||||| | |||||||| ||||||||| |||||||||||||| |||||||||||    
T  10484614 taaaagggcaacccggtgcactaaagctcccgcatacgcagggtccaggaaggggtcc 10484671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 145 - 210
Target Start/End: Original strand, 44403554 - 44403619
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttt 210  Q
    |||| |||||| |||||||| |||||| |  |||||| ||||||||||||||||||||||||||||    
T  44403554 aaaaaggcagcccggtgcactaaagcttcagcatacgtagggtccgggaaggggtcccaccatttt 44403619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 150 - 227
Target Start/End: Complemental strand, 55401330 - 55401254
Alignment:
Q  150 ggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcag 227  Q
    |||||| |||||||  ||||||||| |||||| | |||||| ||||||||||||||| |||||||||||| |||||||    
T  55401330 ggcagcccggtgcaaaaaagctcccgcatacggaaggtccgagaaggggtcccacca-ttttggtgtattatacgcag 55401254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 235 - 310
Target Start/End: Complemental strand, 53062112 - 53062036
Alignment:
Q  235 taccctgttttt-acacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttacc 310  Q
    |||||||||||| ||||| ||| | ||||| |||||||| || |||| | |||||||||||||||||||||||||||    
T  53062112 taccctgtttttgacacaggaggctgtttccaggacttgaacacgtgacctttcagtcacatgacaacaactttacc 53062036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 159 - 305
Target Start/End: Complemental strand, 7943134 - 7942993
Alignment:
Q  159 gtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-tttttacacaagagac 257  Q
    |||||| ||||||||| |||||||| |||| || ||||| ||||||||  |||| |||||| ||||||| ||    ||||||| |||||| ||||||  |    
T  7943134 gtgcactaaagctcccgcatacgcatggtctggaaagggatcccacca--tttgatgtattgtacgcagtct----taccctgttttttagacaagatgc 7943041  T
Q  258 cgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaact 305  Q
     ||||| |||||||| | ||||| | || |||||||||||||||||||    
T  7943040 tgtttccaggacttgaatccgtgaccttccagtcacatgacaacaact 7942993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 144 - 210
Target Start/End: Complemental strand, 40968677 - 40968611
Alignment:
Q  144 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttt 210  Q
    ||||||||||||||| ||||| ||||||||| |||| | ||||||  |||||||||| |||||||||    
T  40968677 taaaagggcagctcgatgcactaaagctcccgcatatgtagggtctaggaaggggtctcaccatttt 40968611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 145 - 194
Target Start/End: Complemental strand, 47624257 - 47624208
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaa 194  Q
    ||||||||| | |||||||| ||||||||| |||||||||||||||||||    
T  47624257 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaa 47624208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 145 - 206
Target Start/End: Original strand, 50624952 - 50625013
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccacca 206  Q
    ||||||||||| |||||||| ||||||||| | ||||||||| || |||||| |||||||||    
T  50624952 aaaagggcagcccggtgcactaaagctcccacttacgcagggcccaggaaggcgtcccacca 50625013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 319
Target Start/End: Original strand, 25517309 - 25517341
Alignment:
Q  287 cagtcacatgacaacaactttaccagttgcgcc 319  Q
    |||||||||||||||||||||||||||||||||    
T  25517309 cagtcacatgacaacaactttaccagttgcgcc 25517341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 286 - 317
Target Start/End: Complemental strand, 21875042 - 21875011
Alignment:
Q  286 tcagtcacatgacaacaactttaccagttgcg 317  Q
    ||||||||||||||||||||||||||||||||    
T  21875042 tcagtcacatgacaacaactttaccagttgcg 21875011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 242 - 317
Target Start/End: Complemental strand, 26782432 - 26782357
Alignment:
Q  242 tttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcg 317  Q
    |||||||||||||||  ||||| |||||||| | ||||| | ||||| || |||||||| |||||||||| |||||    
T  26782432 tttttacacaagagattgtttcaaggacttgaatccgtgacctttcaatcgcatgacaataactttaccaattgcg 26782357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 144 - 199
Target Start/End: Original strand, 45416932 - 45416986
Alignment:
Q  144 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggt 199  Q
    |||||||||||| |||||||| |||||| |  ||||||||||||||||||||||||    
T  45416932 taaaagggcagcccggtgcac-aaagcttctgcatacgcagggtccgggaaggggt 45416986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 166 - 231
Target Start/End: Complemental strand, 9276400 - 9276338
Alignment:
Q  166 aaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt 231  Q
    |||| |||| ||||||||||||||||||| |||| ||||||  ||||||||||| |||||||||||    
T  9276400 aaagttcccgcatacgcagggtccgggaaagggt-ccacca--tttggtgtattgtacgcagcctt 9276338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 209
Target Start/End: Original strand, 46169988 - 46170030
Alignment:
Q  167 aagctccctcatacgcagggtccgggaaggggtcccaccattt 209  Q
    |||||||| |||| ||||||||||||||||||||| |||||||    
T  46169988 aagctcccacatatgcagggtccgggaaggggtcctaccattt 46170030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 143 - 189
Target Start/End: Original strand, 54032568 - 54032614
Alignment:
Q  143 ctaaaagggcagctcggtgcaccaaagctccctcatacgcagggtcc 189  Q
    ||||||||||| | |||||||| ||||||||| ||||||||||||||    
T  54032568 ctaaaagggcaacccggtgcactaaagctcccgcatacgcagggtcc 54032614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 310
Target Start/End: Complemental strand, 19731155 - 19731000
Alignment:
Q  150 ggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-tttttac 248  Q
    |||||| |||||||| ||||||||  ||||| ||| ||| ||||| |||||||||||   | |||||||| |||||| |||    |||| || |||||||    
T  19731155 ggcagcccggtgcactaaagctcctgcatacacagagtctgggaaagggtcccacca--ataggtgtattgtacgcaacct----taccttgttttttac 19731062  T
Q  249 acaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttacc 310  Q
    ||||||| |  |||| |||||||| | ||||| | ||||| |||| ||||||||| ||||||    
T  19731061 acaagaggctatttccaggacttgcatccgtgacctttcaatcacgtgacaacaaatttacc 19731000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 319
Target Start/End: Complemental strand, 35417982 - 35417906
Alignment:
Q  242 tttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    |||||||||||||| | ||||| |||| ||| || |||| | | |||||||||||| |||||||||||| ||||||||    
T  35417982 tttttacacaagaggctgtttccaggatttgaactcgtgacctctcagtcacatgataacaactttacc-gttgcgcc 35417906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 311
Target Start/End: Complemental strand, 9627788 - 9627712
Alignment:
Q  235 taccctgtttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttacca 311  Q
    |||||| |||||||||||||| | |||||||||||||  |||| |  | |||||||||| ||||| |||| ||||||    
T  9627788 taccctatttttacacaagagtctgtttctaggacttaaacccataccctttcagtcacgtgacaccaacgttacca 9627712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 149 - 209
Target Start/End: Complemental strand, 35418058 - 35417998
Alignment:
Q  149 gggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccattt 209  Q
    ||||||| || ||||| ||||||| | |||  || ||||||||||||||||||||||||||    
T  35418058 gggcagcccgatgcactaaagctctcgcatttgcggggtccgggaaggggtcccaccattt 35417998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 189
Target Start/End: Original strand, 43956471 - 43956515
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtcc 189  Q
    ||||||||||| |||||||| ||||||||| ||||||| ||||||    
T  43956471 aaaagggcagcccggtgcactaaagctcccgcatacgctgggtcc 43956515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 92; Significance: 1e-44; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 145 - 319
Target Start/End: Original strand, 12221913 - 12222085
Alignment:
Q  145 aaaagggcagctcggtgcaccaaa-gctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-t 242  Q
    ||||||||| | |||||||| ||| |||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||    ||||||| |    
T  12221913 aaaagggcaacccggtgcactaaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagcct----taccctgtt 12222008  T
Q  243 ttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    ||||||||||||| | ||||| | |||||| ||||||| | ||||||||||||||||||||||||||||||||||||    
T  12222009 ttttacacaagaggctgtttccaagacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgcc 12222085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 145 - 315
Target Start/End: Original strand, 29355854 - 29356022
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttt 244  Q
    ||||||||| | |||||||| ||||||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||    ||||||||||    
T  29355854 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagcct----taccctgttt 29355949  T
Q  245 -ttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaa-ctttaccagttg 315  Q
     ||||||||||| | ||||| |||||||| ||||||| | ||||||||||||||||||||  |||||||||||    
T  29355950 cttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaatttttaccagttg 29356022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 144 - 319
Target Start/End: Original strand, 1354755 - 1354923
Alignment:
Q  144 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtt 243  Q
    |||||||||| | |||||||| | ||||||| |||| |||||||||||||||||||||||||||||  |||||||| |||||||||||    ||||||||    
T  1354755 taaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccattt--ggtgtattgtacgcagcctt----accctgtt 1354848  T
Q  244 tttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    || ||||||||| | ||||| |||||||| ||| ||| | ||||||||||||||||||||||||||||||||||||    
T  1354849 tt-acacaagaggctgtttccaggacttgaaccagtgacctttcagtcacatgacaacaactttaccagttgcgcc 1354923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 145 - 319
Target Start/End: Complemental strand, 1347098 - 1346931
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttt 244  Q
    ||||||||| | |||||||| | ||||||| |||| |||||||||||||||||||||||||||||  |||||||| |||||||||||    |||||||||    
T  1347098 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccattt--ggtgtattgtacgcagcctt----accctgttt 1347005  T
Q  245 ttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    | ||||||| | | ||||| |||||||| ||||||| | ||||||||||||||||||||||||||||||||||||    
T  1347004 t-acacaagtggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgcc 1346931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 145 - 310
Target Start/End: Complemental strand, 9161260 - 9161099
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttt 244  Q
    ||||||||| |  ||||||| |||||| || ||||||||||||||| ||||||||||||||||| ||| |||||| ||||||||||    ||| ||||||    
T  9161260 aaaagggcaacctggtgcactaaagcttccgcatacgcagggtccgagaaggggtcccaccattattgatgtattgtacgcagcct----tactctgttt 9161165  T
Q  245 ttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttacc 310  Q
    ||||||||||| | ||||| |||||||| ||| ||| | |||||||||||||||||||||||||||    
T  9161164 ttacacaagaggctgtttccaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 9161099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 145 - 318
Target Start/End: Original strand, 2166409 - 2166579
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgt-t 243  Q
    ||||||||| | |||||||| |||||||||  |||   |||||||||||||||||||||||||| |||||||||| |||||| |||    || ||||| |    
T  2166409 aaaagggcaacccggtgcactaaagctcccgaatatatagggtccgggaaggggtcccaccattattggtgtattgtacgcaacct----tatcctgtat 2166504  T
Q  244 tttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgc 318  Q
    ||||||||||||   ||||| |||||||| ||||||| | |||||||||||| ||||||||||||| ||||||||    
T  2166505 tttacacaagaggttgtttccaggacttgaacccgtgacctttcagtcacataacaacaactttactagttgcgc 2166579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 145 - 318
Target Start/End: Original strand, 2178042 - 2178212
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgt-t 243  Q
    ||||||||| | |||||||| |||||||||  |||   |||||||||||||||||||||||||| |||||||||| |||||| |||    || ||||| |    
T  2178042 aaaagggcaacccggtgcactaaagctcccgaatatatagggtccgggaaggggtcccaccattattggtgtattgtacgcaacct----tatcctgtat 2178137  T
Q  244 tttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgc 318  Q
    ||||||||||||   ||||| |||||||| ||||||| | |||||||||||| ||||||||||||| ||||||||    
T  2178138 tttacacaagaggttgtttccaggacttgaacccgtgacctttcagtcacataacaacaactttactagttgcgc 2178212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 157 - 319
Target Start/End: Original strand, 3815088 - 3815245
Alignment:
Q  157 cggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccc-taccctgtttttacacaagag 255  Q
    |||||||| |||||| || |||||| ||||| |||||| ||||||||||||||  |||||||| ||||||| | | || ||     ||||||||||| ||    
T  3815088 cggtgcactaaagcttccgcatacgtagggttcgggaaagggtcccaccattt--ggtgtattgtacgcagtcgtaccatat----tttttacacaatag 3815181  T
Q  256 accgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
     | ||||| |||||||| ||||||| | ||||||||||||||||||||||||||||||||||||    
T  3815182 tctgtttccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 3815245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 144 - 227
Target Start/End: Complemental strand, 12886050 - 12885967
Alignment:
Q  144 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcag 227  Q
    |||||||||| | |||||||| ||||||||| ||||||||||||| |||||||||||||||||||||| ||||||| |||||||    
T  12886050 taaaagggcaacccggtgcactaaagctcccacatacgcagggtctgggaaggggtcccaccattttttgtgtattgtacgcag 12885967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 184 - 317
Target Start/End: Complemental strand, 6024332 - 6024202
Alignment:
Q  184 gggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-tttttacacaagagaccgtttctaggacttggacccgtgtc 282  Q
    |||||||||||| ||||||| |||| |||||||||| ||||||| ||    |||| || |||||||||||||| | |||||||||| ||| | ||||| |    
T  6024332 gggtccgggaagaggtcccatcattattggtgtattgtacgcagtct----taccatgttttttacacaagaggctgtttctaggatttgaaaccgtgac 6024237  T
Q  283 gtttcagtcacatgacaacaactttaccagttgcg 317  Q
     || || ||||||||||||||||||||||||||||    
T  6024236 cttccaatcacatgacaacaactttaccagttgcg 6024202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 145 - 226
Target Start/End: Complemental strand, 12892145 - 12892064
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgca 226  Q
    ||||||||| | |||||||| ||||||||| |||| || ||||||||||||||||||||||||| |||||||||| ||||||    
T  12892145 aaaagggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattatacgca 12892064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 149 - 319
Target Start/End: Original strand, 13904984 - 13905146
Alignment:
Q  149 gggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttt-ta 247  Q
    ||||||| |||||||| |||||||| | ||||||||||| |||||| |||||| |||||||  |||| ||| || ||||||||    |||||||||| ||    
T  13904984 gggcagcccggtgcac-aaagctccgtgatacgcagggttcgggaaagggtcc-accattt--ggtgaattgtatgcagcctt----accctgtttttta 13905075  T
Q  248 cacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    ||||||||  |||||  ||||||||  |||||| | ||||||||||||||||||||||||||| ||||||||    
T  13905076 cacaagaggtcgttttcaggacttgagcccgtgacctttcagtcacatgacaacaactttacc-gttgcgcc 13905146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 146 - 231
Target Start/End: Original strand, 7947371 - 7947455
Alignment:
Q  146 aaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt 231  Q
    ||||||||||   |||||| ||||||||| |||||||| |||||||||||||| ||||||| |||||||||||| |||||||||||    
T  7947371 aaagggcagccaagtgcactaaagctcccacatacgcaaggtccgggaagggggcccacca-ttttggtgtattgtacgcagcctt 7947455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 242 - 319
Target Start/End: Complemental strand, 8409287 - 8409210
Alignment:
Q  242 tttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    |||||||||||||| | ||||| |||||||| | ||||| | |||||||||||| |||||||||||||||||||||||    
T  8409287 tttttacacaagaggcagtttccaggacttgaatccgtgacctttcagtcacattacaacaactttaccagttgcgcc 8409210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 168 - 316
Target Start/End: Complemental strand, 14553626 - 14553482
Alignment:
Q  168 agctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt-ccctaccctgtttttacacaagagaccgtttctag 266  Q
    ||||||| ||||| |||||||   ||||||||||||||| |||||||||||| ||| ||||||| |||||     |||||||||||||  |  |||| ||    
T  14553626 agctcccgcatacacagggtctacgaaggggtcccaccagttttggtgtattatacacagccttacccta----ttttttacacaagaagctatttccag 14553531  T
Q  267 gacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgc 316  Q
    |||||| ||| ||| | ||| |||||||||||||||||||||||||||||    
T  14553530 gacttgaacctgtgaccttt-agtcacatgacaacaactttaccagttgc 14553482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 145 - 208
Target Start/End: Complemental strand, 6808531 - 6808468
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatt 208  Q
    ||||||||| | |||||||| ||||||||| ||||| |||||||||||||||||||||||||||    
T  6808531 aaaagggcaacccggtgcactaaagctcccgcatacacagggtccgggaaggggtcccaccatt 6808468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 144 - 207
Target Start/End: Original strand, 23930125 - 23930188
Alignment:
Q  144 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccat 207  Q
    |||||||||| |||||||||| ||||||||| |||| |||||||||| ||||||||||||||||    
T  23930125 taaaagggcaactcggtgcactaaagctcccgcataagcagggtccgtgaaggggtcccaccat 23930188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 157 - 219
Target Start/End: Original strand, 3116140 - 3116202
Alignment:
Q  157 cggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtatt 219  Q
    ||||| || ||||||||| |||||||| |||||| ||||||||||||||||||||||||||||    
T  3116140 cggtgtactaaagctcccgcatacgcaaggtccgagaaggggtcccaccatttttggtgtatt 3116202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 242 - 319
Target Start/End: Original strand, 14975171 - 14975248
Alignment:
Q  242 tttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    |||||||||||||| | ||||| |||||||| | ||||| | || |||||||||||||||||||||||| ||||||||    
T  14975171 tttttacacaagaggctgtttccaggacttgaatccgtgaccttccagtcacatgacaacaactttaccggttgcgcc 14975248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 148 - 315
Target Start/End: Original strand, 15866041 - 15866201
Alignment:
Q  148 agggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttttt- 246  Q
    |||||| ||| |||||| | || |||| || |||||||||||||||||||||||||||||||  ||||||||  ||||||| ||    |||||||||||     
T  15866041 agggcaactcagtgcactatagatcccgcaaacgcagggtccgggaaggggtcccaccattt--ggtgtatt--acgcagcttt----accctgtttttt 15866132  T
Q  247 acacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttg 315  Q
    ||  ||||| | ||||| |||| ||| |||| || | ||||| ||||||| ||||||||||||||||||    
T  15866133 acttaagaggctgtttccaggaattgaacccatgacctttcaatcacatgccaacaactttaccagttg 15866201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 146 - 206
Target Start/End: Original strand, 10734905 - 10734965
Alignment:
Q  146 aaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccacca 206  Q
    |||||||||| ||||| || ||||||||| ||||||||||||||||||||||| |||||||    
T  10734905 aaagggcagcccggtggactaaagctcccgcatacgcagggtccgggaagggggcccacca 10734965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 145 - 209
Target Start/End: Complemental strand, 13267861 - 13267797
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccattt 209  Q
    ||||||||| | ||||||||  |||||||| |||||||||||||| |||||||||||||||||||    
T  13267861 aaaagggcaacccggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 13267797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 146 - 294
Target Start/End: Complemental strand, 17432483 - 17432332
Alignment:
Q  146 aaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccc--taccctgtt 243  Q
    |||||||| | |||||||| ||||||||| ||| | |||| ||||||||  |||| |||||||||| ||||||| ||| ||||||| ||  |||||||||    
T  17432483 aaagggcaacccggtgcactaaagctcccgcatgcacaggatccgggaaaaggtctcaccatttttagtgtattgtacacagccttacccttaccctgtt 17432384  T
Q  244 ttt-acacaagagaccgtttctaggacttggacccgtgtcgtttcagtcaca 294  Q
    ||| ||||||||    ||||| |||||||| ||| ||| | |||||||||||    
T  17432383 ttttacacaagatgttgtttccaggacttgaacctgtgacctttcagtcaca 17432332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 145 - 231
Target Start/End: Complemental strand, 26097294 - 26097210
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt 231  Q
    ||||||||| | |||||||| | ||||||| |||| ||||||||||||||||||||||  ||  ||||||||||| |||||||||||    
T  26097294 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccttca--tttggtgtattgtacgcagcctt 26097210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 176 - 319
Target Start/End: Complemental strand, 24734749 - 24734600
Alignment:
Q  176 catacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccc------taccctgtttttacacaagagaccgtttctaggac 269  Q
    |||||||||| ||||||||||||||||||| |||||| |||||| |||||| |||| ||      |    | ||||||||||||||   ||||| ||||     
T  24734749 catacgcaggatccgggaaggggtcccaccttttttgttgtattgtacgcaaccttaccctgtttttttttttttttacacaagaggttgtttcaaggat 24734650  T
Q  270 ttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    ||| ||   || | ||||||||||||||||||||||||||||||||||||    
T  24734649 ttgaacttttgacctttcagtcacatgacaacaactttaccagttgcgcc 24734600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 258 - 319
Target Start/End: Original strand, 33922935 - 33922996
Alignment:
Q  258 cgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    ||||||||||||||| ||| ||| | ||||||||| ||||||||||||||||| ||||||||    
T  33922935 cgtttctaggacttgaacctgtgacttttcagtcaaatgacaacaactttaccggttgcgcc 33922996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 146 - 206
Target Start/End: Complemental strand, 11395895 - 11395836
Alignment:
Q  146 aaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccacca 206  Q
    |||||||||| ||||| || ||||||||| |||||||||| ||||||||||||||||||||    
T  11395895 aaagggcagc-cggtggactaaagctcccgcatacgcaggatccgggaaggggtcccacca 11395836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 166 - 209
Target Start/End: Complemental strand, 24097692 - 24097649
Alignment:
Q  166 aaagctccctcatacgcagggtccgggaaggggtcccaccattt 209  Q
    |||||| || ||||||||||||||||||||||||||||||||||    
T  24097692 aaagcttccgcatacgcagggtccgggaaggggtcccaccattt 24097649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 145 - 231
Target Start/End: Complemental strand, 25557859 - 25557775
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt 231  Q
    ||||||||| | |||||||| | ||||||| |||| ||||||||||||||||||| ||  ||  ||||||||||| |||||||||||    
T  25557859 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggttccttca--tttggtgtattgtacgcagcctt 25557775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 242 - 316
Target Start/End: Complemental strand, 12063511 - 12063437
Alignment:
Q  242 tttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgc 316  Q
    |||||| ||||||| |  ||||||||||||| ||||||| | |||||||| ||||| |||||||||| |||||||    
T  12063511 tttttatacaagaggctatttctaggacttgaacccgtgacctttcagtctcatgataacaactttatcagttgc 12063437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 157 - 219
Target Start/End: Original strand, 14975101 - 14975163
Alignment:
Q  157 cggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtatt 219  Q
    |||||||| ||| ||||| |||| || |||| |||||||||||||||||||| ||||||||||    
T  14975101 cggtgcactaaaactcccgcatatgcggggttcgggaaggggtcccaccattattggtgtatt 14975163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 319
Target Start/End: Complemental strand, 20400711 - 20400634
Alignment:
Q  242 tttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    |||||||||||||||  ||||| |  ||||| ||| ||| | |||||||||||||||||||||| ||||| |||||||    
T  20400711 tttttacacaagagattgtttccataacttgaacctgtgacctttcagtcacatgacaacaactataccaattgcgcc 20400634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 316
Target Start/End: Complemental strand, 8417474 - 8417442
Alignment:
Q  284 tttcagtcacatgacaacaactttaccagttgc 316  Q
    |||||||||||||||||||||||||||||||||    
T  8417474 tttcagtcacatgacaacaactttaccagttgc 8417442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 146 - 310
Target Start/End: Complemental strand, 12889562 - 12889402
Alignment:
Q  146 aaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttt 245  Q
    |||||||||| || ||||| ||||||||| || ||  ||||||||| ||||||||||| |  ||| |||||||| || |||||||    | |||||||||    
T  12889562 aaagggcagcccgatgcactaaagctcccacacacagagggtccggaaaggggtcccatc-gtttaggtgtattgtatgcagcct----tgccctgtttt 12889468  T
Q  246 t-acacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttacc 310  Q
    | ||||||||| | ||||  | |||||| ||| ||| | ||||| |||| ||||||||||||||||    
T  12889467 taacacaagaggctgttttcaagacttgaacctgtgacctttcactcacgtgacaacaactttacc 12889402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 284 - 319
Target Start/End: Original strand, 19649300 - 19649335
Alignment:
Q  284 tttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    ||||||||||||||||||||||||| ||||||||||    
T  19649300 tttcagtcacatgacaacaactttatcagttgcgcc 19649335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 166 - 209
Target Start/End: Complemental strand, 32579540 - 32579497
Alignment:
Q  166 aaagctccctcatacgcagggtccgggaaggggtcccaccattt 209  Q
    ||||||||| |||| |||||||| ||||||||||||||||||||    
T  32579540 aaagctcccgcatatgcagggtctgggaaggggtcccaccattt 32579497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 231
Target Start/End: Original strand, 2755466 - 2755507
Alignment:
Q  190 gggaaggggtcccaccatttttggtgtattttacgcagcctt 231  Q
    |||||||  ||||||||||||||||||||| |||||||||||    
T  2755466 gggaaggactcccaccatttttggtgtattgtacgcagcctt 2755507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 146 - 225
Target Start/End: Original strand, 383760 - 383837
Alignment:
Q  146 aaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgc 225  Q
    |||||||| | ||||| ||  |||||||| ||||||||||||| | ||||||||||||| |  ||||||||||| |||||    
T  383760 aaagggcaacccggtggactgaagctcccgcatacgcagggtctgagaaggggtcccacaa--tttggtgtattgtacgc 383837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 92; Significance: 1e-44; HSPs: 73)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 144 - 319
Target Start/End: Original strand, 30395724 - 30395896
Alignment:
Q  144 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-t 242  Q
    |||||||||| |||||||||| ||||||||| |||| || ||||||||||||||||||||||||| |||||||||| ||||||||||    ||||||| |    
T  30395724 taaaagggcaactcggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagcct----taccctgtt 30395819  T
Q  243 ttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    ||||||||||||| | ||||| |||||||| ||||||| | ||  ||||||||||||||||||||||||||||||||    
T  30395820 ttttacacaagaggctgtttccaggacttgaacccgtgaccttaaagtcacatgacaacaactttaccagttgcgcc 30395896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 145 - 319
Target Start/End: Complemental strand, 18944805 - 18944633
Alignment:
Q  145 aaaagggcagctcggtgcaccaaa-gctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-t 242  Q
    ||||||||| | |||||||| ||| |||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||    ||||||| |    
T  18944805 aaaagggcaacccggtgcactaaaagctcccgcatacgcagggtccgggaaggggtcccaccattgttggtgtattgtacgcagcct----taccctgtt 18944710  T
Q  243 ttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    ||||||||||||| | ||||| ||| |||| ||| ||| | ||||||||||||||||||||||||||||||||||||    
T  18944709 ttttacacaagaggctgtttccaggccttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 18944633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 144 - 319
Target Start/End: Original strand, 34725096 - 34725264
Alignment:
Q  144 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtt 243  Q
    |||||||||| | |||||||| | ||||||| |||| |||||||||||||||||||||||||||||   ||||||| |||||||||||    ||||||||    
T  34725096 taaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccattta--gtgtattgtacgcagcctt----accctgtt 34725189  T
Q  244 tttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    || ||||||||| | ||||| |||||||| ||||||| | ||||||||||||||||||||||||||||||||||||    
T  34725190 tt-acacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgcc 34725264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 160 - 311
Target Start/End: Complemental strand, 27201793 - 27201645
Alignment:
Q  160 tgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttt-ttacacaagagacc 258  Q
    ||||| ||||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||    |||||||||| | ||||||||| |     
T  27201793 tgcactaaagctcccgcatacgcaaggtccgggaaggggtcccaccatttttggtgtattgtacgcagcct----taccctgtttctgacacaagaggct 27201698  T
Q  259 gtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttacca 311  Q
    ||||| |||||||| |||| || | ||||||||||||||||||||||||||||    
T  27201697 gtttccaggacttgaacccatgacctttcagtcacatgacaacaactttacca 27201645  T

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Target: chr1; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 145 - 315
Target Start/End: Original strand, 46247952 - 46248117
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttt 244  Q
    ||||||||| | |||| ||| ||||||||| ||||||||||||||||||||||||||||||||||  |||||||| ||||||| |||    |||||||||    
T  46247952 aaaagggcaacccggtacactaaagctcccgcatacgcagggtccgggaaggggtcccaccattt--ggtgtattgtacgcagtctt----accctgttt 46248045  T
Q  245 t-tacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttg 315  Q
    | |||||||||| | ||||| | |||||| ||||||| | ||||||||||||||||||||||||||||||||    
T  46248046 tttacacaagaggctgtttccaagacttgaacccgtgacatttcagtcacatgacaacaactttaccagttg 46248117  T

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Target: chr1; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 158 - 319
Target Start/End: Original strand, 32632569 - 32632724
Alignment:
Q  158 ggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttttacacaagagac 257  Q
    |||||||  |||||||| |||| |||||||  ||||||||||||||||||||  |||||||| |||||||||||    |||||||||||||||||||| |    
T  32632569 ggtgcactcaagctcccgcatatgcagggtttgggaaggggtcccaccattt--ggtgtattgtacgcagcctt----accctgtttttacacaagaggc 32632662  T
Q  258 cgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
     ||||| |||||||| ||||||| | ||||||||| ||||||||||||||||||||||||||    
T  32632663 tgtttccaggacttgaacccgtgacctttcagtcatatgacaacaactttaccagttgcgcc 32632724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 144 - 319
Target Start/End: Complemental strand, 10668387 - 10668210
Alignment:
Q  144 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-t 242  Q
    |||||||||| | |||||||| ||||||||| ||||||||||| ||||||||||||||||||||| |||||||||| |||||| |||    |||| || |    
T  10668387 taaaagggcaacccggtgcactaaagctcccgcatacgcagggaccgggaaggggtcccaccattattggtgtattgtacgcaacct----taccttgtt 10668292  T
Q  243 ttttacacaagagaccgtttctaggacttggacccgtgtcgtttcag-----tcacatgacaacaactttaccagttgcgcc 319  Q
    ||||||||||||| | ||||| |||||||| ||||||| | ||||||     ||||||||||||||||||||||||||||||    
T  10668291 ttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatcacatgacaacaactttaccagttgcgcc 10668210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 144 - 316
Target Start/End: Original strand, 20004088 - 20004257
Alignment:
Q  144 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-t 242  Q
    |||||||||| | |||||||| ||||||||| |||| || ||||| ||||||||||||||||||| |||||||||| ||||||||||    |||| || |    
T  20004088 taaaagggcaacccggtgcactaaagctcccgcatatgcggggtctgggaaggggtcccaccattattggtgtattgtacgcagcct----taccttgtt 20004183  T
Q  243 ttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgc 316  Q
    |||||||| |||| | ||||| |||||||| ||||||| | || ||||||||||||||||||||||||||||||    
T  20004184 ttttacacgagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgc 20004257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 144 - 315
Target Start/End: Complemental strand, 27474440 - 27474275
Alignment:
Q  144 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtt 243  Q
    ||||||||||   |||||||| ||||||||| |||||||||||||||||||||||||||||||||    ||||||| |||||||| || ||    |||||    
T  27474440 taaaagggcaatccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattca--gtgtattgtacgcagctttgcc----ctgtt 27474347  T
Q  244 tttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttg 315  Q
    |||||||||||||| ||||| | |||||| ||| ||| | ||||||||||||||||||||||||||||||||    
T  27474346 tttacacaagagactgtttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccagttg 27474275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 165 - 319
Target Start/End: Complemental strand, 11596651 - 11596504
Alignment:
Q  165 caaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttttacacaagagaccgtttct 264  Q
    |||||||||| |||||||||||||| |||||||||||||||||||  |||||||| |||||||||||    ||||||||||||||||||||   ||||||    
T  11596651 caaagctcccgcatacgcagggtccaggaaggggtcccaccattt--ggtgtattatacgcagcctt----accctgtttttacacaagaggttgtttct 11596558  T
Q  265 aggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    |||||||| ||||||| | |||||||||||||||| | |||||||| ||||||||    
T  11596557 aggacttgaacccgtgacatttcagtcacatgacagccactttacc-gttgcgcc 11596504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 145 - 319
Target Start/End: Original strand, 38478281 - 38478448
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttt 244  Q
    ||||||||| | |||||||| | ||||||| |||| |||||||||| |||||||| |||||||||  |||||||| |||||||||||    |||||||||    
T  38478281 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgagaaggggttccaccattt--ggtgtattgtacgcagcctt----accctgttt 38478374  T
Q  245 ttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    | ||||||||| | |||||||||||||| ||||||| | |||||||||||||||||||| ||||| |||||||||    
T  38478375 t-acacaagaggctgtttctaggacttgaacccgtgacctttcagtcacatgacaacaagtttactagttgcgcc 38478448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 158 - 319
Target Start/End: Complemental strand, 47214655 - 47214501
Alignment:
Q  158 ggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttttacacaagagac 257  Q
    ||||||| | ||||||| |||| |||||||| ||||||||||||||||||||  |||||||| |||||| ||||    |||||||||| | |||||||||    
T  47214655 ggtgcactagagctcccgcatatgcagggtctgggaaggggtcccaccattt--ggtgtattgtacgcaacctt----accctgttttaa-acaagagac 47214563  T
Q  258 cgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
     ||||| |||||||| ||||||| | ||||||||||||||||||||||||||||||||||||    
T  47214562 tgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgcc 47214501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 157 - 316
Target Start/End: Complemental strand, 46991951 - 46991797
Alignment:
Q  157 cggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-tttttacacaagag 255  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||||||  || |||||||| ||| ||||||    ||||||| ||||||||||||||    
T  46991951 cggtgcactaaagctcccacatacgcagggtccgggaaggggtcccacca--ttcggtgtattgtacacagcct----taccctgttttttacacaagag 46991858  T
Q  256 accgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgc 316  Q
       ||||| |||||||| ||||||| | || ||||||||||||||||||||||||||||||    
T  46991857 gttgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgc 46991797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 157 - 319
Target Start/End: Original strand, 18741968 - 18742129
Alignment:
Q  157 cggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg--tttttacacaaga 254  Q
    |||||||| ||||||| | ||||||||||||| |||||||||||||||||||||||||||||| ||||||||||    |||||||  |||||| |||| |    
T  18741968 cggtgcactaaagctctcgcatacgcagggtctgggaaggggtcccaccatttttggtgtattgtacgcagcct----taccctgtttttttatacaaaa 18742063  T
Q  255 gaccgttt-ctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    ||| |||| | | || ||| |||| || | ||||||||||||||||||||||||||||||||||||    
T  18742064 gactgtttcccaagatttgaacccttgacctttcagtcacatgacaacaactttaccagttgcgcc 18742129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 146 - 310
Target Start/End: Original strand, 35117765 - 35117927
Alignment:
Q  146 aaagggcagctcggtgcaccaaagctccctcat-acgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgt-t 243  Q
    |||||| ||| |||||||| ||||||||  ||| ||||||||||||||||||||||||| ||||||||||||||| ||| ||||||    |||||||| |    
T  35117765 aaagggaagcccggtgcactaaagctcctgcattacgcagggtccgggaaggggtcccatcatttttggtgtattgtacacagcct----taccctgtat 35117860  T
Q  244 tttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttacc 310  Q
    |||||||||||| |  |||| |||||||| ||||||| | |||||||||| ||||||||||||||||    
T  35117861 tttacacaagaggctatttccaggacttgaacccgtgacctttcagtcacgtgacaacaactttacc 35117927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 144 - 319
Target Start/End: Complemental strand, 14617198 - 14617028
Alignment:
Q  144 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtt 243  Q
    |||||||| | | |||||||| ||||||||| |||| ||||||||||||||||| |||||||||||  |||||||| |||||| |||| |||    ||||    
T  14617198 taaaagggtaacccggtgcactaaagctcccgcatatgcagggtccgggaagggatcccaccattt--ggtgtattgtacgcaaccttacct----tgtt 14617105  T
Q  244 -tttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
     |||||||||||| | ||||| |||||||| || |||| | ||||||||||||||||||||||||||| ||||||||    
T  14617104 atttacacaagaggctgtttccaggacttgaactcgtgacctttcagtcacatgacaacaactttaccggttgcgcc 14617028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 160 - 317
Target Start/End: Original strand, 23768334 - 23768486
Alignment:
Q  160 tgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttt-tacacaagagacc 258  Q
    ||||| ||||||||| ||||||||||||| ||||||| ||||||||||||  |||||||| |||||||||||    |||||||||| |||||||||| |     
T  23768334 tgcactaaagctcccgcatacgcagggtctgggaaggtgtcccaccattt--ggtgtattgtacgcagcctt----accctgttttttacacaagaggct 23768427  T
Q  259 gtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcg 317  Q
    ||||| | |||||| ||| ||| | || |||||||||||||||||||||||||||||||    
T  23768428 gtttccatgacttgaacctgtgaccttacagtcacatgacaacaactttaccagttgcg 23768486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 145 - 313
Target Start/End: Complemental strand, 6925259 - 6925096
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt-ccctaccctgtt 243  Q
    |||| |||| |||||||||| ||||||||| ||||||||||| |||||||||||||||||||  || |||||||| | ||||||||| |||||     ||    
T  6925259 aaaaaggcaactcggtgcactaaagctcccgcatacgcagggaccgggaaggggtcccacca--ttcggtgtattgtccgcagccttacccta----ttt 6925166  T
Q  244 tttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagt 313  Q
    |||||||||||| |  |||| |||||||| ||||||| | || |||||||||||||||||||||||||||    
T  6925165 tttacacaagaggctatttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagt 6925096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 144 - 293
Target Start/End: Complemental strand, 35005285 - 35005139
Alignment:
Q  144 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-t 242  Q
    |||||||||| | |||||||| ||||| ||| |||||||||||||||||||||||||||||||||||||||||||| || |||||||    ||||||| |    
T  35005285 taaaagggcaacccggtgcactaaagcgcccgcatacgcagggtccgggaaggggtcccaccatttttggtgtattgtatgcagcct----taccctgtt 35005190  T
Q  243 ttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcac 293  Q
    ||||||||||||| | ||||  | |||||| ||||||| | ||||||||||    
T  35005189 ttttacacaagaggctgttttcaagacttgaacccgtgacctttcagtcac 35005139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 157 - 319
Target Start/End: Complemental strand, 45402243 - 45402085
Alignment:
Q  157 cggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagc-cttccctaccctgtttttacacaagag 255  Q
    |||||||| ||||||||| ||||||||||||| ||||||||||||||||||||  |||||||| |||||||  |||    ||||||||||||||||||||    
T  45402243 cggtgcactaaagctcccgcatacgcagggtctgggaaggggtcccaccattt--ggtgtattgtacgcagaacttga--accctgtttttacacaagag 45402148  T
Q  256 accgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
     | ||||| |||||||| ||||||  | || || ||||||||||||||||||||||||||||||    
T  45402147 gctgtttccaggacttgaacccgttaccttcca-tcacatgacaacaactttaccagttgcgcc 45402085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 149 - 319
Target Start/End: Original strand, 18724549 - 18724712
Alignment:
Q  149 gggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttt-ta 247  Q
    |||||||| ||||||| ||||||||| |||| | |||||||||||||||||||||  ||||  |||||||| ||| |||||||    |||||||||| ||    
T  18724549 gggcagcttggtgcac-aaagctcccgcatatgtagggtccgggaaggggtcccaagattt--ggtgtattgtacacagcctt----accctgtttttta 18724641  T
Q  248 cacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    |||||||| | ||||| |||||||| ||||||| | ||||||||||||||||||||||||||| ||||||||    
T  18724642 cacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacc-gttgcgcc 18724712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 144 - 311
Target Start/End: Complemental strand, 19414597 - 19414437
Alignment:
Q  144 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtt 243  Q
    |||||||||| | |||||||| | ||||||| |||| ||||||| ||||||||||||||||||  ||||||||||| ||||||||||    || |||| |    
T  19414597 taaaagggcaacccggtgcactagagctcccgcatatgcagggtacgggaaggggtcccacca--tttggtgtattgtacgcagcct----taacctg-t 19414505  T
Q  244 tttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttacca 311  Q
    |||||| ||||| |  ||||||||||||| ||||||| | ||||||||| ||||||||||||||||||    
T  19414504 tttacataagaggctctttctaggacttgaacccgtgacctttcagtcatatgacaacaactttacca 19414437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 142 - 315
Target Start/End: Original strand, 41319802 - 41319970
Alignment:
Q  142 cctaaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg 241  Q
    |||||||||||| | | ||||||  || ||||| |||| | ||||| ||||||||||||||| |||||  |||||||| |||||||||||    ||||||    
T  41319802 cctaaaagggcaacccagtgcactgaaactcccgcatatgaagggttcgggaaggggtcccatcattt--ggtgtattgtacgcagcctt----accctg 41319895  T
Q  242 tttt-tacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttg 315  Q
    |||| |||||||||||| ||||| |||||||  ||| ||| | ||||||||||||||||||||||||||||||||    
T  41319896 ttttttacacaagagactgtttccaggacttaaacctgtgacctttcagtcacatgacaacaactttaccagttg 41319970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 176 - 319
Target Start/End: Original strand, 19932783 - 19932920
Alignment:
Q  176 catacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-tttttacacaagagaccgtttctaggacttgga 274  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||    ||||||| ||||||||||| ||   || || |  ||||| |    
T  19932783 catacgcagggtccgggaaggggtcccaccatttttggtgtattgtacgcagcct----taccctgttttttacacaa-aggttgtatcca--acttgaa 19932875  T
Q  275 cccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    ||| || | ||||||||||||||||||||||||||||||||||||    
T  19932876 cccatgacctttcagtcacatgacaacaactttaccagttgcgcc 19932920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 157 - 319
Target Start/End: Original strand, 45812548 - 45812703
Alignment:
Q  157 cggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttttacacaagaga 256  Q
    |||||||| | ||||||| |||| |||||||  |||||||||||||||||  ||||||||||| || |||||||    ||||||  ||||||||||||||    
T  45812548 cggtgcactagagctcccgcatatgcagggtttgggaaggggtcccacca--tttggtgtattgtatgcagcct----taccct-cttttacacaagaga 45812640  T
Q  257 ccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    | ||||  |||||||| ||| ||| | ||||||||||||||||||||||||| ||||||||||    
T  45812641 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttatcagttgcgcc 45812703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 144 - 319
Target Start/End: Complemental strand, 9939624 - 9939450
Alignment:
Q  144 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaa-ggggtcccaccatttttggtgtattttacgcagccttccctaccctgt 242  Q
    |||||||| | | |||||||| ||||||||| ||||||||||||||| ||| |||||||||||||||||||||||||  ||||| |||    |||| |||    
T  9939624 taaaagggtaacccggtgcactaaagctcccgcatacgcagggtccgagaagggggtcccaccatttttggtgtattgcacgcaacct----taccatgt 9939529  T
Q  243 tt-ttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaac-tttaccagttgcgcc 319  Q
    || ||| |||||||   ||||| |||||||| || |||| | ||||||||||||||||||||| |||||| ||||||||    
T  9939528 ttcttaaacaagaggttgtttccaggacttgaactcgtgacctttcagtcacatgacaacaacttttaccggttgcgcc 9939450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 144 - 311
Target Start/End: Original strand, 6983809 - 6983969
Alignment:
Q  144 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtt 243  Q
    |||||||||||| |||||||||||||||||  | |||||||||||||| ||||||||||||||  ||||||||||| ||||||    | | |||||||||    
T  6983809 taaaagggcagcccggtgcaccaaagctcctgcctacgcagggtccggaaaggggtcccacca--tttggtgtattgtacgca----tacttaccctgtt 6983902  T
Q  244 tttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttacca 311  Q
    |||  | | ||| | ||||| |||||||| ||| ||| | |||||||||| |||||||||||||||||    
T  6983903 ttt-tatacgaggctgtttccaggacttgaacctgtgacctttcagtcacgtgacaacaactttacca 6983969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 157 - 319
Target Start/End: Original strand, 2435797 - 2435954
Alignment:
Q  157 cggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttttt-acacaagag 255  Q
    |||||||| ||||||||| ||| || ||||| ||| |||||||||||||||||| |||||||| ||||||| |||    ||||| ||||| ||||| |||    
T  2435797 cggtgcactaaagctcccgcatgcggagggtacggaaaggggtcccaccatttt-ggtgtattgtacgcaggctt----accctatttttcacacaggag 2435891  T
Q  256 accgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
     | ||||| |||||||| ||||||| | |||||||||| |||||||||||||||| ||||||||    
T  2435892 gctgtttccaggacttgaacccgtgacctttcagtcacgtgacaacaactttacc-gttgcgcc 2435954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 146 - 231
Target Start/End: Complemental strand, 4349796 - 4349713
Alignment:
Q  146 aaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt 231  Q
    |||||||| | |||||||| ||||||||| |||||||||||||||||||||||||||||||  ||||||||||| |||||||||||    
T  4349796 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccacca--tttggtgtattgtacgcagcctt 4349713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 145 - 319
Target Start/End: Original strand, 12126836 - 12127003
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttt 244  Q
    ||||||||| | | |||||| | ||||||| |||| |||||||||||||||||||||||| |  ||||||||||| ||||||||||    ||||||| ||    
T  12126836 aaaagggcaacgcagtgcactacagctcccgcatatgcagggtccgggaaggggtcccacaa--tttggtgtattgtacgcagcct----taccctg-tt 12126928  T
Q  245 ttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    ||||||||||  | ||||| || ||||  ||||||| | ||||| | |||||||||||||||||| |||||||||    
T  12126929 ttacacaagaagctgtttccagaacttaaacccgtgacctttcaattacatgacaacaactttacgagttgcgcc 12127003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 181 - 319
Target Start/End: Original strand, 22930104 - 22930235
Alignment:
Q  181 gcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttttacacaagagaccgtttctaggacttggacccgtg 280  Q
    ||||||||| |||||||||||||||||||  |||||||| | | || ||||    ||||||||||||||||| || | ||||| |||||||| |||| ||    
T  22930104 gcagggtccaggaaggggtcccaccattt--ggtgtattgt-cacaacctt----accctgtttttacacaaaaggctgtttccaggacttgaacccatg 22930196  T
Q  281 tcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
     | ||||||||||||||||||||||||||||||||||||    
T  22930197 acctttcagtcacatgacaacaactttaccagttgcgcc 22930235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 157 - 295
Target Start/End: Original strand, 35253198 - 35253329
Alignment:
Q  157 cggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttttacacaagaga 256  Q
    |||||||| | ||||||| |||| ||||||||||||||||||||||||||  ||||||||||| ||||||||||    ||||||| |||||||||||||     
T  35253198 cggtgcactagagctcccgcatatgcagggtccgggaaggggtcccacca--tttggtgtattgtacgcagcct----taccctg-ttttacacaagagg 35253290  T
Q  257 ccgtttctaggacttggacccgtgtcgtttcagtcacat 295  Q
    | ||||| |||||||| |||||||   ||||||||||||    
T  35253291 ctgtttcgaggacttgaacccgtgatctttcagtcacat 35253329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 157 - 231
Target Start/End: Original strand, 42304218 - 42304292
Alignment:
Q  157 cggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt 231  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||    
T  42304218 cggtgcactaaagctcccacatacgcagggtccgggaaggggtcccaccattttttgtgtattgtacgcaacctt 42304292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 145 - 219
Target Start/End: Complemental strand, 50606562 - 50606488
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtatt 219  Q
    ||||||||| | |||||||| ||||||||| |||| |||||||||||||||||||||||||||||||||||||||    
T  50606562 aaaagggcaacccggtgcactaaagctcccgcatatgcagggtccgggaaggggtcccaccatttttggtgtatt 50606488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 145 - 316
Target Start/End: Complemental strand, 8197202 - 8197036
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttt 244  Q
    ||||||||| | |||| ||| ||||||||  ||||||||||||||| |||||||||| |||||||  |||||| | |||| ||||||    ||| |||||    
T  8197202 aaaagggcaacccggtacactaaagctccaacatacgcagggtccgagaaggggtcctaccattt--ggtgtactgtacgtagcctt----accatgttt 8197109  T
Q  245 tt-acacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgc 316  Q
    || ||||||||| |  || | |||||||| ||||||| | ||||||||||||||||||||||| |||||||||    
T  8197108 tttacacaagaggcaattaccaggacttgaacccgtgacctttcagtcacatgacaacaacttgaccagttgc 8197036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 145 - 309
Target Start/End: Complemental strand, 19701730 - 19701570
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttt 244  Q
    ||||||| |||  ||||||| ||||||||| ||||||||||||||||||||||| ||||||| |||||||||||| ||| || |||| || |     |||    
T  19701730 aaaagggtagcctggtgcactaaagctcccgcatacgcagggtccgggaaggggccccacca-ttttggtgtattgtacccatccttaccaa---gtttt 19701635  T
Q  245 ttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttac 309  Q
    ||||||||||| | ||||  | |||||  ||||||| | ||||||||||| ||||||||||||||    
T  19701634 ttacacaagaggctgttttcatgacttaaacccgtgacatttcagtcacacgacaacaactttac 19701570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 145 - 311
Target Start/End: Complemental strand, 20036379 - 20036218
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttt 244  Q
    ||||| ||||| |||||||| ||| ||||  |||||||||||||||||||||||| |||||||||  ||||||||  |||||  ||| ||  |  | | |    
T  20036379 aaaagagcagcccggtgcacaaaa-ctcctgcatacgcagggtccgggaaggggttccaccattt--ggtgtattgaacgcaatcttacc--ctttctct 20036285  T
Q  245 ttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttacca 311  Q
    |||||||||||   ||||| |||||||| ||||||| | ||||||||||||||||||||||||||||    
T  20036284 ttacacaagagtttgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacca 20036218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 148 - 277
Target Start/End: Complemental strand, 22325049 - 22324925
Alignment:
Q  148 agggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttttta 247  Q
    ||||||||  ||||||| ||||||||| |||||||||||| ||||| ||||  ||||||||||||||||||| || |||||||    |||||||||||||    
T  22325049 agggcagcctggtgcactaaagctcccgcatacgcagggt-cgggacggggctccaccatttttggtgtattgtatgcagcct----taccctgttttta 22324955  T
Q  248 cacaagagaccgtttctaggacttggaccc 277  Q
    |||||||| | ||||| | |||||| ||||    
T  22324954 cacaagaggctgtttccaagacttgaaccc 22324925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 176 - 319
Target Start/End: Complemental strand, 25290300 - 25290153
Alignment:
Q  176 catacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccct-accctgttttt-acacaagagaccgt--ttctaggactt 271  Q
    |||| |||| ||| |||||||||||| | ||||||||||||||| ||| || |||| ||| ||||||||||| ||||||||| | ||  ||| | |||||    
T  25290300 catatgcagagtctgggaaggggtcctatcatttttggtgtattgtacacaaccttgccttaccctgttttttacacaagaggctgtgtttccaagactt 25290201  T
Q  272 ggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    | || |||| | ||||||||||||||||||||||||||| ||||||||    
T  25290200 gaacacgtgacctttcagtcacatgacaacaactttacctgttgcgcc 25290153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 160 - 310
Target Start/End: Original strand, 17470361 - 17470505
Alignment:
Q  160 tgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttt-tacacaagagacc 258  Q
    ||||| ||||||||| ||||||||||   | |||| ||||||||| ||||| |||||||| |||||||||||    |||||||||| |||||||||| |     
T  17470361 tgcactaaagctcccacatacgcaggt--caggaacgggtcccactatttt-ggtgtattgtacgcagcctt----accctgttttttacacaagaggct 17470453  T
Q  259 gtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttacc 310  Q
    |||||||||||||| |||| || |  ||||||||| ||||||||||||||||    
T  17470454 gtttctaggacttgaacccatgaccattcagtcacgtgacaacaactttacc 17470505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 195 - 319
Target Start/End: Complemental strand, 33223093 - 33222974
Alignment:
Q  195 ggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcaca 294  Q
    |||||||||||||||| |||||||| |||||| |||| ||    ||||||||||||||||| | ||||| | |||||  | ||||| | |||||||||||    
T  33223093 ggggtcccaccatttt-ggtgtattgtacgcaacctttcc----ctgtttttacacaagaggctgtttccatgacttaaatccgtgacctttcagtcaca 33222999  T
Q  295 tgacaacaactttaccagttgcgcc 319  Q
    |||||||||||||||| ||||||||    
T  33222998 tgacaacaactttaccggttgcgcc 33222974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 148 - 311
Target Start/End: Original strand, 15511150 - 15511311
Alignment:
Q  148 agggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtatttta--cgcagccttccctaccctg-ttt 244  Q
    |||||||| |||||||| ||||||| | |||||||||||||| ||||||||| |||||| |||||||||||| ||  ||||||||    ||||||| |||    
T  15511150 agggcagcccggtgcactaaagctcacacatacgcagggtccaggaaggggtaccacca-ttttggtgtattgtatccgcagcct----taccctgtttt 15511244  T
Q  245 ttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttacca 311  Q
    ||||||||||| | ||||| |||||||  |   ||| | |||||| ||||| |||||||||||||||    
T  15511245 ttacacaagaggcggtttccaggacttcaatatgtgacctttcagccacattacaacaactttacca 15511311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 168 - 309
Target Start/End: Original strand, 25468285 - 25468421
Alignment:
Q  168 agctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-tttttacacaagagaccgtttctag 266  Q
    ||||||| ||||||||||||| |||||| ||||| |||||||  |||||||| |||||| ||||    |||||| ||||||||||||||   ||||| ||    
T  25468285 agctcccgcatacgcagggtctgggaagaggtccaaccattt--ggtgtattgtacgcaacctt----accctgatttttacacaagaggttgtttccag 25468378  T
Q  267 gacttggacccgtgtcgtttcagtcacatgacaacaactttac 309  Q
    |||||| |||| || | ||||| ||||||||||||||||||||    
T  25468379 gacttgaacccatgacctttcaatcacatgacaacaactttac 25468421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 157 - 231
Target Start/End: Original strand, 31442400 - 31442473
Alignment:
Q  157 cggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt 231  Q
    |||||||||||||||||| ||||| ||| ||||||||||||||||||||| |||||||||||| |||||| ||||    
T  31442400 cggtgcaccaaagctcccacatacacagtgtccgggaaggggtcccacca-ttttggtgtattgtacgcatcctt 31442473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 145 - 319
Target Start/End: Complemental strand, 50812099 - 50811930
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg--t 242  Q
    ||||||||||| | |||||  ||||||||| |||||||||||  ||||||||||| |||||| |||||||||||| |||||| |||    |||||||  |    
T  50812099 aaaagggcagcccagtgcattaaagctcccgcatacgcagggcgcgggaaggggt-ccacca-ttttggtgtattgtacgcaacct----taccctgttt 50812006  T
Q  243 ttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    ||||||||||||  | ||||| ||||| ||   ||||| | |||||||||| |||||||||||||||| ||||||||    
T  50812005 ttttacacaagaagctgtttccaggacatgattccgtgacctttcagtcacgtgacaacaactttacc-gttgcgcc 50811930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 149 - 231
Target Start/End: Original strand, 10378738 - 10378818
Alignment:
Q  149 gggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt 231  Q
    ||||||| |||||||| ||||||||| |||| |||||||||  |||||||||||||||  ||||||||||| |||||||||||    
T  10378738 gggcagcccggtgcactaaagctcccgcatatgcagggtccaagaaggggtcccacca--tttggtgtattgtacgcagcctt 10378818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 145 - 227
Target Start/End: Complemental strand, 15505722 - 15505643
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcag 227  Q
    |||| ||||| ||||||||| ||||||||| |||||||||||| ||||||||||||||||||  ||||||||||| |||||||    
T  15505722 aaaaaggcagttcggtgcac-aaagctcccgcatacgcagggttcgggaaggggtcccacca--tttggtgtattgtacgcag 15505643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 145 - 268
Target Start/End: Original strand, 31382213 - 31382330
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttt 244  Q
    ||||||||| | |||| ||  ||||||||| |||| ||||||||| ||||||||||||||||  ||||||||||| ||||||||||    || |||||||    
T  31382213 aaaagggcaacccggtacagtaaagctcccgcatatgcagggtccaggaaggggtcccacca--tttggtgtattgtacgcagcct----tatcctgttt 31382306  T
Q  245 ttacacaagagaccgtttctagga 268  Q
    ||||||||||| | ||||| ||||    
T  31382307 ttacacaagaggctgtttccagga 31382330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 265 - 319
Target Start/End: Complemental strand, 40424786 - 40424732
Alignment:
Q  265 aggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    |||||||| ||||||| | ||||||||||||||||||||||||||||||||||||    
T  40424786 aggacttgaacccgtggcctttcagtcacatgacaacaactttaccagttgcgcc 40424732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 165 - 309
Target Start/End: Original strand, 44485128 - 44485267
Alignment:
Q  165 caaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgt-ttttacacaagagaccgtttc 263  Q
    |||||||||| |||||| ||| ||||||||||||||| ||||  ||||||||||| ||||||||||    |||| ||| ||||||||||| |   |||||    
T  44485128 caaagctcccgcatacgtaggatccgggaaggggtccaacca--tttggtgtattgtacgcagcct----taccatgtcttttacacaagtggttgtttc 44485221  T
Q  264 taggacttggacccgtgtcgtttcagtcacatgacaacaactttac 309  Q
     ||||||   ||||||| | ||||| ||||||||||||||||||||    
T  44485222 caggactataacccgtgacctttcaatcacatgacaacaactttac 44485267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 144 - 231
Target Start/End: Original strand, 20999848 - 20999933
Alignment:
Q  144 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt 231  Q
    |||||||||||| |||||||| ||||||||| | |||||||||| | |||||||| |||| ||  ||||||||||| |||||||||||    
T  20999848 taaaagggcagcccggtgcactaaagctcccgcgtacgcagggtgccggaaggggccccatca--tttggtgtattgtacgcagcctt 20999933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 145 - 209
Target Start/End: Complemental strand, 30555274 - 30555210
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccattt 209  Q
    |||||| |||| |||||||| ||||||| | ||||||||||||||| ||||||||||||||||||    
T  30555274 aaaaggtcagcccggtgcactaaagctctcgcatacgcagggtccgtgaaggggtcccaccattt 30555210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 145 - 231
Target Start/End: Original strand, 1517310 - 1517394
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt 231  Q
    ||||||||| | |||||||| ||||||||  ||||||||||||| | |||||||||||||||   |||||||||| |||||||||||    
T  1517310 aaaagggcaacccggtgcactaaagctcctgcatacgcagggtctgagaaggggtcccacca--attggtgtattgtacgcagcctt 1517394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 145 - 231
Target Start/End: Complemental strand, 23796624 - 23796540
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt 231  Q
    ||||||||||| |||||||| ||||||||  |||| |||||||| ||||||||||| |||||  ||||||||||| |||||| ||||    
T  23796624 aaaagggcagcccggtgcactaaagctccagcatatgcagggtctgggaaggggtctcacca--tttggtgtattgtacgcaacctt 23796540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 145 - 231
Target Start/End: Complemental strand, 43768298 - 43768214
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt 231  Q
    ||||||||||| |||||||  |||||||||  |||||||||||| |||||||||||||||||   |||||||||| || ||||||||    
T  43768298 aaaagggcagcccggtgcattaaagctcccgtatacgcagggtctgggaaggggtcccacca--attggtgtattgtaggcagcctt 43768214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 144 - 206
Target Start/End: Original strand, 33594129 - 33594191
Alignment:
Q  144 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccacca 206  Q
    |||||||| ||| | |||||| ||||||||| ||||||||||||| |||||||||||||||||    
T  33594129 taaaagggtagcccagtgcactaaagctcccgcatacgcagggtctgggaaggggtcccacca 33594191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 145 - 307
Target Start/End: Complemental strand, 22327255 - 22327101
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttt 244  Q
    |||| |||||| |||||||||||||||||| ||||| ||| || ||||||     ||||||||||| |||| ||  ||| |||||||    |||||||||    
T  22327255 aaaaaggcagcccggtgcaccaaagctcccgcatacacagagttcgggaac----cccaccatttt-ggtgcatcgtacacagcctt----accctgttt 22327165  T
Q  245 tt-acacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttt 307  Q
    || |||||||||   ||||| |||||||| ||||| | | ||||||||||||||||||||||||    
T  22327164 tttacacaagaggttgtttccaggacttgaacccgcgacctttcagtcacatgacaacaacttt 22327101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 254 - 319
Target Start/End: Complemental strand, 34714678 - 34714613
Alignment:
Q  254 agaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    |||| ||||| | |||||| ||||||| | ||||| ||||||||||||||||||||||||||||||    
T  34714678 agactgtttccatgacttgaacccgtgacctttcaatcacatgacaacaactttaccagttgcgcc 34714613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 157 - 209
Target Start/End: Original strand, 4587574 - 4587626
Alignment:
Q  157 cggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccattt 209  Q
    ||||||||  |||||||| |||| |||||||||||||||||||||||||||||    
T  4587574 cggtgcactgaagctcccgcataggcagggtccgggaaggggtcccaccattt 4587626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 165 - 209
Target Start/End: Complemental strand, 30682951 - 30682907
Alignment:
Q  165 caaagctccctcatacgcagggtccgggaaggggtcccaccattt 209  Q
    |||||||||| |||||||| |||||||||||||||||||||||||    
T  30682951 caaagctcccgcatacgcacggtccgggaaggggtcccaccattt 30682907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 144 - 231
Target Start/End: Original strand, 19974072 - 19974158
Alignment:
Q  144 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt 231  Q
    |||||||||||| | |||||| ||||||||| |||||  || ||||||||| |||||||| || |||||||||||| |||||| ||||    
T  19974072 taaaagggcagccccgtgcactaaagctcccgcatacatagagtccgggaatgggtcccatca-ttttggtgtattgtacgcaacctt 19974158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 209 - 319
Target Start/End: Original strand, 4430087 - 4430194
Alignment:
Q  209 tttggtgtattttacgcagccttccctaccctgtttt-tacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttt 307  Q
    ||||||||||| ||||||| |||    |||||||||| ||||||||| || ||||  | |||||  ||||||| | || |||||||||||||||||||||    
T  4430087 tttggtgtattgtacgcagtctt----accctgttttttacacaagatactgttttcaagacttaaacccgtgaccttccagtcacatgacaacaacttt 4430182  T
Q  308 accagttgcgcc 319  Q
    ||||| ||||||    
T  4430183 accagctgcgcc 4430194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 149 - 231
Target Start/End: Original strand, 39214961 - 39215042
Alignment:
Q  149 gggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt 231  Q
    ||||||| |||||||| |||||| || ||||||||||||  ||||||||| ||||||| ||||||  |||| |||||||||||    
T  39214961 gggcagcccggtgcactaaagcttccacatacgcagggtttgggaaggggacccacca-ttttggaatattgtacgcagcctt 39215042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 158 - 219
Target Start/End: Original strand, 45264411 - 45264471
Alignment:
Q  158 ggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtatt 219  Q
    ||||||| ||||||||| |||| |||||||| | ||||||||||||||| ||||||||||||    
T  45264411 ggtgcactaaagctcccgcatatgcagggtctgagaaggggtcccacca-ttttggtgtatt 45264471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 310
Target Start/End: Original strand, 2435984 - 2436052
Alignment:
Q  242 tttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttacc 310  Q
    |||||||||| |||   ||||| |||||||| ||||||| | |||||||||| ||||||||||||||||    
T  2435984 tttttacacaggaggttgtttccaggacttgaacccgtgacctttcagtcacgtgacaacaactttacc 2436052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 228
Target Start/End: Complemental strand, 6358250 - 6358199
Alignment:
Q  176 catacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagc 228  Q
    ||||||||||||| ||||||||||||||||| ||||||||| || ||||||||    
T  6358250 catacgcagggtctgggaaggggtcccacca-ttttggtgttttgtacgcagc 6358199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 310
Target Start/End: Original strand, 50760288 - 50760385
Alignment:
Q  210 ttggtgtattttacgcagccttccctaccctgtttt-tacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 308  Q
    |||||||||| |||||||||||    |||| ||||| |||||||||| | ||||  |||||||| ||||||| | | |||||||||||||||| ||||||    
T  50760288 ttggtgtattatacgcagcctt----acccagttttatacacaagaggctgttttcaggacttgaacccgtgacctctcagtcacatgacaactacttta 50760383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 145 - 231
Target Start/End: Complemental strand, 35019388 - 35019305
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt 231  Q
    |||| |||||| |||||||| ||||||| | ||||||||||||| ||| |||||||||||||   |||||||||| || ||||||||    
T  35019388 aaaatggcagcccggtgcactaaagctctcgcatacgcagggtctggg-aggggtcccacca--attggtgtattgtatgcagcctt 35019305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 200
Target Start/End: Original strand, 25554742 - 25554796
Alignment:
Q  146 aaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtc 200  Q
    |||||||||  |||||||| || |||||| |||||||||||| ||||||||||||    
T  25554742 aaagggcagtccggtgcactaatgctcccgcatacgcagggttcgggaaggggtc 25554796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 176 - 204
Target Start/End: Original strand, 3060003 - 3060031
Alignment:
Q  176 catacgcagggtccgggaaggggtcccac 204  Q
    |||||||||||||||||||||||||||||    
T  3060003 catacgcagggtccgggaaggggtcccac 3060031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 201
Target Start/End: Complemental strand, 16120875 - 16120819
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcc 201  Q
    |||||||||||  ||||||  ||||||||| |||| |||||| ||||||||||||||    
T  16120875 aaaagggcagcctggtgcattaaagctcccgcatatgcaggggccgggaaggggtcc 16120819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 315
Target Start/End: Complemental strand, 21723686 - 21723658
Alignment:
Q  287 cagtcacatgacaacaactttaccagttg 315  Q
    |||||||||||||||||||||||||||||    
T  21723686 cagtcacatgacaacaactttaccagttg 21723658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 193
Target Start/End: Original strand, 50760239 - 50760287
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccggga 193  Q
    ||||||||||| |||||||  ||||||||| |||||||||||| |||||    
T  50760239 aaaagggcagcccggtgcattaaagctcccgcatacgcagggttcggga 50760287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 91; Significance: 5e-44; HSPs: 87)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 145 - 319
Target Start/End: Complemental strand, 5648394 - 5648226
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttt 244  Q
    ||||||||| | | ||||||  |||||||| ||||||||||||||||||||||||||||||||||  |||||||| |||||||||||    |||||||||    
T  5648394 aaaagggcaacccagtgcactgaagctcccgcatacgcagggtccgggaaggggtcccaccattt--ggtgtattgtacgcagcctt----accctgttt 5648301  T
Q  245 ttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    ||||||||||| | ||||| |||||||| ||||||| | || |||||||||||||||||||||||||||||||||    
T  5648300 ttacacaagaggctgtttccaggacttgaacccgtgaccttacagtcacatgacaacaactttaccagttgcgcc 5648226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 147 - 319
Target Start/End: Original strand, 6430627 - 6430793
Alignment:
Q  147 aagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttttt 246  Q
    ||||||| | |||||| | ||||||||| |||||||||||||||||||| |||||||||||||  |||||||| |||||||||||    |||||||||||    
T  6430627 aagggcaacccggtgcgctaaagctcccgcatacgcagggtccgggaagtggtcccaccattt--ggtgtattgtacgcagcctt----accctgttttt 6430720  T
Q  247 acacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    ||||||||| | ||||| | |||||| ||||||| | ||||||||||||||||||||||||||||||||||||    
T  6430721 acacaagaggctgtttccatgacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgcc 6430793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 144 - 319
Target Start/End: Complemental strand, 16911701 - 16911529
Alignment:
Q  144 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-t 242  Q
    |||||||||| | ||||  || ||||||||| | ||||||||||||||||||||||||||||||| |||||||||| ||||||||||    ||||||| |    
T  16911701 taaaagggcaacccggtaaactaaagctcccgcgtacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagcct----taccctgat 16911606  T
Q  243 ttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    || |||||||||| | |||||||||||||| ||||||| | ||| ||||||||||||||||||||||||||||||||    
T  16911605 ttgtacacaagaggctgtttctaggacttgaacccgtgacctttaagtcacatgacaacaactttaccagttgcgcc 16911529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 145 - 319
Target Start/End: Original strand, 16408600 - 16408771
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttt 244  Q
    ||||||||| | |||||||| ||||||||| |||| || |||||||||||||||| |||||||| |||||||||| ||||||| |||    |||||||||    
T  16408600 aaaagggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggttccaccattattggtgtattgtacgcagtctt----accctgttt 16408695  T
Q  245 t-tacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    | |||||||||| | ||||| |||||||| ||||||| | || |||||||||||||||||||||||||||||||||    
T  16408696 tttacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgcc 16408771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 145 - 319
Target Start/End: Complemental strand, 30639515 - 30639347
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttt 244  Q
    ||||||||| | | |||||| ||||||||| |||| |||||||||||||||||||| ||||||||  |||||||| |||||||||||    |||||||||    
T  30639515 aaaagggcaacccagtgcactaaagctcccgcatatgcagggtccgggaaggggtctcaccattt--ggtgtattgtacgcagcctt----accctgttt 30639422  T
Q  245 ttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    ||||||||||| | ||||| |||||||| ||| ||| | ||||||||||| ||||||||||||||||||||||||    
T  30639421 ttacacaagagtctgtttccaggacttgaaccagtgacctttcagtcacaagacaacaactttaccagttgcgcc 30639347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 145 - 319
Target Start/End: Original strand, 30352579 - 30352759
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg--- 241  Q
    ||||||||| | |||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||||||| |||||||| || | |||||||       
T  30352579 aaaagggcaacacggtgcactaaagctcccgcatacgcagggtccgagaaggggtcccaccatttttggtgtattgtacgcagctttacttaccctgttt 30352678  T
Q  242 ---tttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
       |||||||||||||| | ||||| ||||||   ||||||| | |||| ||||| |||||||||||||||||||||||||    
T  30352679 ttttttttacacaagaggctgtttccaggactctaacccgtgacctttcggtcacttgacaacaactttaccagttgcgcc 30352759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 146 - 313
Target Start/End: Original strand, 44363130 - 44363294
Alignment:
Q  146 aaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-ttt 244  Q
    |||||||| | |||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||  || |||||||    |||||||||| |||    
T  44363130 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttttggtgcgttgtacgcag----ccctaccctgtttt 44363225  T
Q  245 ttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagt 313  Q
    ||||||| ||| | ||||  |||||||| || |||| | ||||||||||||||||||||||||||||||    
T  44363226 ttacacacgaggctgttttcaggacttgaactcgtgacctttcagtcacatgacaacaactttaccagt 44363294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 145 - 319
Target Start/End: Original strand, 48598824 - 48598991
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttt 244  Q
    ||||||||| | |||||||| | ||||||  |||| ||| |||||||||||||||||||||||||  |||||||| |||||||||||    |||||||||    
T  48598824 aaaagggcaacccggtgcactagagctccggcatatgcatggtccgggaaggggtcccaccattt--ggtgtattgtacgcagcctt----accctgttt 48598917  T
Q  245 ttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    | ||||||||| | ||||| |||||||| ||||||| | ||||||||||||||||||||||||||||||||||||    
T  48598918 t-acacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgcc 48598991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 146 - 319
Target Start/End: Complemental strand, 20225117 - 20224951
Alignment:
Q  146 aaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttt 245  Q
    |||||||| | |||||||| | ||||||| |||| |||||||||||||||||||||||||||||  |||||||| |||||||||||    ||||||||||    
T  20225117 aaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccattt--ggtgtattgtacgcagcctt----accctgtttt 20225024  T
Q  246 tacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
     |||||||||   ||||| |||||||| |||| || | ||||||||||||||||||||||||||||||||||||    
T  20225023 -acacaagaggttgtttccaggacttgaacccatgacctttcagtcacatgacaacaactttaccagttgcgcc 20224951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 176 - 319
Target Start/End: Original strand, 5306694 - 5306831
Alignment:
Q  176 catacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttttacacaagagaccgtttctaggacttggac 275  Q
    ||||||||||||||||||||||||||||||||||  |||||||| |||||| ||||    |||||| ||||||||||||| | ||||| |||||||| ||    
T  5306694 catacgcagggtccgggaaggggtcccaccattt--ggtgtattgtacgcaacctt----accctgattttacacaagaggctgtttccaggacttgaac 5306787  T
Q  276 ccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    ||||| | |||||||||||||||| |||||||||||||||||||    
T  5306788 ccgtgacctttcagtcacatgacatcaactttaccagttgcgcc 5306831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 145 - 319
Target Start/End: Complemental strand, 23501925 - 23501760
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-tt 243  Q
    ||||||||| | |||||||| ||||||||| |||| |||||||||||||||||||||||||||| |||||||||| |||||| |||    ||||||| ||    
T  23501925 aaaagggcaacccggtgcactaaagctcccgcatatgcagggtccgggaaggggtcccaccattattggtgtattgtacgcaacct----taccctgttt 23501830  T
Q  244 tttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    |||||||||||| | ||      |||||| ||||||| | ||||||||||||||||||||||||||||||||||||    
T  23501829 tttacacaagaggctgt------gacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgcc 23501760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 145 - 316
Target Start/End: Original strand, 47528529 - 47528693
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttt 244  Q
    ||||||||| | |||||||| | ||||||| ||||  ||||||||||||||||||||||||||||  |||||||| |||||||||||    |||||||||    
T  47528529 aaaagggcaacccggtgcactagagctcccacatattcagggtccgggaaggggtcccaccattt--ggtgtattgtacgcagcctt----accctgttt 47528622  T
Q  245 ttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgc 316  Q
    | ||||||||| | ||||| |||||||| ||| ||| | |||||||||||||||||||||||||||||||||    
T  47528623 t-acacaagaggctgtttccaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgc 47528693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 145 - 319
Target Start/End: Original strand, 11054147 - 11054314
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttt 244  Q
    ||||||||| | |||||||| | ||||||| |||| ||||||||||||||||||| || ||||||  |||||||| ||||||| |||    |||||||||    
T  11054147 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggttccgccattt--ggtgtattgtacgcagtctt----accctgttt 11054240  T
Q  245 ttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    | ||||||||||| ||||  |||||||| ||||||| | ||||||||||||||||||||||||||||||||||||    
T  11054241 t-acacaagagactgttttcaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgcc 11054314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 145 - 306
Target Start/End: Complemental strand, 54175201 - 54175043
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtcc-gggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtt 243  Q
    ||||||||||| |||||||| ||||||||| |||| ||||||||| ||||||||||||||||| |||||||||||| ||||||||||    |||||||||    
T  54175201 aaaagggcagcccggtgcactaaagctcccgcatatgcagggtccggggaaggggtcccacca-ttttggtgtattgtacgcagcct----taccctgtt 54175107  T
Q  244 tttacacaagagaccg-tttctaggacttggacccgtgtcgtttcagtcacatgacaacaactt 306  Q
    |||||||||||| | | |||| |||||||| | ||||| | |||||||||||||||||||||||    
T  54175106 tttacacaagaggctgttttccaggacttgaatccgtgacatttcagtcacatgacaacaactt 54175043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 156 - 319
Target Start/End: Complemental strand, 54730377 - 54730216
Alignment:
Q  156 tcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt-ccctaccctgtttttacacaaga 254  Q
    ||||||||| ||||||||| |||||||||||||||||||||||| ||| |||| |||||||||| |||||||||||  ||||   | |||||||||||||    
T  54730377 tcggtgcactaaagctcccgcatacgcagggtccgggaaggggttccatcattattggtgtattatacgcagccttatccta---tttttttacacaaga 54730281  T
Q  255 gaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    | | |||||||||||||| ||||||| | |||  ||||||||||||||||||||||  |||||||    
T  54730280 ggctgtttctaggacttgaacccgtgaccttttggtcacatgacaacaactttaccgattgcgcc 54730216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 157 - 313
Target Start/End: Complemental strand, 40915952 - 40915802
Alignment:
Q  157 cggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttttacacaagaga 256  Q
    ||||||||  |||||||| |||||||||||||||||||||| |||||||||||  |||||||| ||||||||||| |||    ||||||||||||||||     
T  40915952 cggtgcactgaagctcccgcatacgcagggtccgggaagggctcccaccattt--ggtgtattgtacgcagccttacct----tgtttttacacaagagg 40915859  T
Q  257 ccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagt 313  Q
    | ||||| |||||||| ||||||| | ||  ||||||||||||||||||||||||||    
T  40915858 ctgtttccaggacttgaacccgtgaccttatagtcacatgacaacaactttaccagt 40915802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 157 - 319
Target Start/End: Complemental strand, 21647090 - 21646931
Alignment:
Q  157 cggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt-ccctaccctgtttttacacaagag 255  Q
    |||||||| ||||||||| |||| || ||||| ||||||||||||||||||| ||||| |||| ||||||||||| |||||     ||||||||||||||    
T  21647090 cggtgcactaaagctcccgcatatgcggggtctgggaaggggtcccaccattattggtatattgtacgcagccttacccta----ttttttacacaagag 21646995  T
Q  256 accgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
     | ||||| |||||||| ||| ||| | || |||||||||||||||||||||||||||||||||    
T  21646994 gctgtttccaggacttgaacctgtgaccttccagtcacatgacaacaactttaccagttgcgcc 21646931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 144 - 214
Target Start/End: Original strand, 47482848 - 47482918
Alignment:
Q  144 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggt 214  Q
    ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  47482848 taaaagggcagctcgttgcaccaaagctcccgcatacgcagggtccgggaaggggtcccaccatttttggt 47482918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 145 - 269
Target Start/End: Original strand, 20639657 - 20639777
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-tt 243  Q
    ||||||||| | |||||||| ||||||||| ||||||||||||||||||||||||||||||| |||||||||||| ||||||||||    ||||||| ||    
T  20639657 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccacca-ttttggtgtattgtacgcagcct----taccctgttt 20639751  T
Q  244 tttacacaagagaccgtttctaggac 269  Q
    |||||||||||| | ||||| |||||    
T  20639752 tttacacaagaggctgtttccaggac 20639777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 145 - 310
Target Start/End: Complemental strand, 35567306 - 35567146
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-tt 243  Q
    ||||||||||| |||||||| ||||||||| || ||||||||| ||||||||||||||||||  |||||||| || ||| ||||||    ||||||| ||    
T  35567306 aaaagggcagcccggtgcactaaagctcccgcagacgcagggttcgggaaggggtcccacca--tttggtgtgttgtacacagcct----taccctgttt 35567213  T
Q  244 tttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttacc 310  Q
    |||||||||| | | ||||| | |||||| |||| || | ||||||| |||||||||||||||||||    
T  35567212 tttacacaagtggctgtttccaagacttgaacccatgacctttcagttacatgacaacaactttacc 35567146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 145 - 316
Target Start/End: Original strand, 13256398 - 13256562
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-tt 243  Q
    ||||||||| | |||||||| ||||||||| || | || |||| |||||||||||||||| ||| |||||||||| ||||||||||    ||||||| ||    
T  13256398 aaaagggcaacccggtgcactaaagctcccgcagatgcggggttcgggaaggggtcccactattattggtgtattgtacgcagcct----taccctgttt 13256493  T
Q  244 tttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgc 316  Q
    |||||||||||| |    || |||||||| |||  || | || ||||||||||||||||||||||||||||||    
T  13256494 tttacacaagaggc----tccaggacttgaacctatgaccttccagtcacatgacaacaactttaccagttgc 13256562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 148 - 294
Target Start/End: Original strand, 29207900 - 29208039
Alignment:
Q  148 agggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttttta 247  Q
    |||||| | |||||||| | ||||||| |||| ||||||||||||||||||||||||||  ||||||||||| ||||||||||    ||||||| |||||    
T  29207900 agggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccacca--tttggtgtattgtacgcagcct----taccctg-tttta 29207992  T
Q  248 cacaagagaccgtttctaggacttggacccgtgtcgtttcagtcaca 294  Q
    |||||||| |  |||| |||||||| ||||||| | |||||||||||    
T  29207993 cacaagaggcaatttccaggacttgaacccgtgacctttcagtcaca 29208039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 166 - 306
Target Start/End: Original strand, 17043414 - 17043549
Alignment:
Q  166 aaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgt-ttttacacaagagaccgtttct 264  Q
    ||||||||  |||| |||||||| ||||||||||||||||||||  |||||||| |||||||||||    ||||||| ||||||||||||| | |||||     
T  17043414 aaagctccagcatatgcagggtctgggaaggggtcccaccattt--ggtgtattgtacgcagcctt----accctgtattttacacaagaggctgtttcc 17043507  T
Q  265 aggacttggacccgtgtcgtttcagtcacatgacaacaactt 306  Q
    |||||||| ||| ||| | |||||||||| ||||||||||||    
T  17043508 aggacttgaacctgtgacctttcagtcacttgacaacaactt 17043549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 146 - 231
Target Start/End: Complemental strand, 20225211 - 20225126
Alignment:
Q  146 aaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt 231  Q
    |||||||| | |||||||| ||||||||| |||| || ||||||||||||||||||||||||| |||||||||| |||||||||||    
T  20225211 aaagggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagcctt 20225126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 145 - 308
Target Start/End: Original strand, 9832312 - 9832468
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttt 244  Q
    ||||||||| | |||||||| | || |||  |||| ||||||||||||||||||||||||||  ||||||||||| ||||||||||    ||||||| ||    
T  9832312 aaaagggcaacccggtgcactagagttcctgcatatgcagggtccgggaaggggtcccacca--tttggtgtattgtacgcagcct----taccctg-tt 9832404  T
Q  245 ttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 308  Q
    ||||||||||| | ||||  |||||||| ||||||| | ||||||||| || ||||||| ||||    
T  9832405 ttacacaagaggctgttttcaggacttgaacccgtgacctttcagtcagatcacaacaatttta 9832468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 157 - 311
Target Start/End: Complemental strand, 19027972 - 19027823
Alignment:
Q  157 cggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-tttttacacaagag 255  Q
    |||||||| ||||||||| ||||||||| ||| || ||||||||||||||   |||||||||| ||||||||||    ||||||| |||||||||||||     
T  19027972 cggtgcactaaagctcccacatacgcagagtctggaaaggggtcccacca--attggtgtattgtacgcagcct----taccctgttttttacacaagat 19027879  T
Q  256 accgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttacca 311  Q
       ||||| |||||||| ||||||| | |||||||||| ||||||||||| |||||    
T  19027878 gttgtttccaggacttgaacccgtgacctttcagtcacgtgacaacaactctacca 19027823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 145 - 308
Target Start/End: Original strand, 23580207 - 23580365
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttt 244  Q
    |||||||||||||||||||| ||||||||| ||||| |||| |||  ||||||||| | ||||||| |||||||  ||||||| ||||||    ||||||    
T  23580207 aaaagggcagctcggtgcactaaagctcccacatacacagg-tccaagaaggggtctcgccatttt-ggtgtatcctacgcagtcttccc----ctgttt 23580300  T
Q  245 t-tacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 308  Q
    | |||||||||| |  ||||||| ||||| ||||||| | |||||||||| ||||||||||||||    
T  23580301 tttacacaagaggctctttctagaacttgaacccgtgacctttcagtcacgtgacaacaacttta 23580365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 157 - 319
Target Start/End: Original strand, 47441541 - 47441697
Alignment:
Q  157 cggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-tttttacacaagag 255  Q
    ||||| || ||||||||  | ||| |||||||||||||||||||| |||||||  |||||||| ||| |||||||    |||||| |||||||| |||||    
T  47441541 cggtggacgaaagctcctgcttactcagggtccgggaaggggtccaaccattt--ggtgtattgtacacagcctt----accctgatttttacaaaagag 47441634  T
Q  256 accgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    || |||||| ||||||| ||| ||| | |||||||||| |||||||||||||||| ||||||||    
T  47441635 actgtttcttggacttgaacctgtgacctttcagtcacgtgacaacaactttacc-gttgcgcc 47441697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 145 - 231
Target Start/End: Original strand, 20908635 - 20908720
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt 231  Q
    |||||||||||   |||||| ||||||||| |||||||||||| |||||||||||||||||| |||||||||||| |||||||||||    
T  20908635 aaaagggcagccttgtgcactaaagctcccgcatacgcagggttcgggaaggggtcccacca-ttttggtgtattgtacgcagcctt 20908720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 149 - 311
Target Start/End: Complemental strand, 25343321 - 25343162
Alignment:
Q  149 gggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-ttttta 247  Q
    |||||||  ||||| | ||||||| | |||||||||| ||  ||||||||||| ||| ||||||||||||| ||||||||||    ||||||| ||||||    
T  25343321 gggcagccgggtgctctaaagctctcacatacgcaggatctaggaaggggtccaaccctttttggtgtattgtacgcagcct----taccctgtttttta 25343226  T
Q  248 cacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttacca 311  Q
    ||||||||||  |||| || ||||| ||| ||| | | |||||||| |||||||||||||||||    
T  25343225 cacaagagactatttccagaacttgaacctgtgacctatcagtcacgtgacaacaactttacca 25343162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 145 - 219
Target Start/End: Original strand, 33836486 - 33836560
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtatt 219  Q
    ||||||||| | || ||||| ||||||||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  33836486 aaaagggcaacccgttgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtatt 33836560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 242 - 319
Target Start/End: Complemental strand, 14590881 - 14590804
Alignment:
Q  242 tttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    |||||| ||||||| | |||||||||||||| | ||||| | ||||||||||||||||||||||||||||||||||||    
T  14590881 tttttagacaagaggctgtttctaggacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgcc 14590804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 160 - 317
Target Start/End: Complemental strand, 20405210 - 20405062
Alignment:
Q  160 tgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg--tttttacacaagagac 257  Q
    ||||| ||||||||| |||| || ||||||||||||||||||||||||| || ||||||| ||||||  ||    |||||||  |||||||||||||| |    
T  20405210 tgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattagtgtattgtacgcaatct----taccctgtttttttacacaagaggc 20405115  T
Q  258 cgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcg 317  Q
     |||||||||       |||||| | || |||||||||||||||||||||||||||||||    
T  20405114 tgtttctagg-------cccgtgaccttccagtcacatgacaacaactttaccagttgcg 20405062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 146 - 308
Target Start/End: Original strand, 30690176 - 30690340
Alignment:
Q  146 aaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt-ccctaccct---g 241  Q
    ||||||||||  ||||||| ||||||||| |||||||||||||||||||||||||||||||   |||||||||| || |||||||| ||||    |        
T  30690176 aaagggcagcctggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccacca--attggtgtattgtatgcagccttaccctgttttttat 30690273  T
Q  242 tttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 308  Q
    |||||||||||||| |  |||| |||||||| ||||||| | |||||||||| ||||||| ||||||    
T  30690274 tttttacacaagaggctttttccaggacttgaacccgtgacctttcagtcacttgacaaccacttta 30690340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 144 - 231
Target Start/End: Original strand, 51865036 - 51865121
Alignment:
Q  144 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt 231  Q
    |||||||||||  |||||||  ||||||||| ||||||||||||||||||||||| |||||||  ||||||||||| |||||||||||    
T  51865036 taaaagggcagtccggtgcaataaagctcccgcatacgcagggtccgggaaggggccccacca--tttggtgtattgtacgcagcctt 51865121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 144 - 314
Target Start/End: Complemental strand, 14983971 - 14983806
Alignment:
Q  144 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt-ccctaccctgt 242  Q
    |||||||||| |  ||| ||| ||||||||| |||||||||||||||||||||||||||||||  ||| ||||||| || ||| |||| |||||     |    
T  14983971 taaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggggtcccacca--tttagtgtattgtaggcaaccttacccta----tt 14983878  T
Q  243 ttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagtt 314  Q
    ||||||||||||| | ||||| | |||||| | ||||| | || || ||| |||||||||||||||||||||    
T  14983877 ttttacacaagaggctgtttcaaagacttgaatccgtgaccttccaatcatatgacaacaactttaccagtt 14983806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 156 - 319
Target Start/End: Original strand, 30496332 - 30496488
Alignment:
Q  156 tcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttttacacaagag 255  Q
    ||||||||| |||||||| ||||| ||| |||||||||||| ||||| |||  ||||||||||| || |||||||    ||||| || ||||||||||||    
T  30496332 tcggtgcactaaagctccatcataagcacggtccgggaaggagtcccccca--tttggtgtattgtatgcagcct----taccc-gtgtttacacaagag 30496424  T
Q  256 accgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
     | ||||| | |||||| || |||| | |||||||||| |||||||||||||  ||||||||||    
T  30496425 gctgtttccatgacttgaacacgtgacctttcagtcacgtgacaacaacttttacagttgcgcc 30496488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 147 - 268
Target Start/End: Original strand, 7909281 - 7909397
Alignment:
Q  147 aagggcagctcggtgcaccaaagctccct-catacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttt 245  Q
    ||||||| | || ||||| |||||||||  |||||||||||| ||||||||||||||||||  ||||||||||| |||||| |||    |||||||||||    
T  7909281 aagggcaacccgatgcactaaagctccccgcatacgcagggttcgggaaggggtcccacca--tttggtgtattgtacgcaacct----taccctgtttt 7909374  T
Q  246 tacacaagagaccgtttctagga 268  Q
    |||||||||||| ||||| ||||    
T  7909375 tacacaagagactgtttccagga 7909397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 165 - 300
Target Start/End: Complemental strand, 25463238 - 25463108
Alignment:
Q  165 caaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttttacacaagagaccgtttct 264  Q
    |||||||||| |||| ||||||||||||||||||||||||||  |||||||| || |||||| ||||   | ||   ||||||||||||||   |||||     
T  25463238 caaagctcccgcatatgcagggtccgggaaggggtcccacca--tttggtgtgttgtacgcaacctt---tcccagttttttacacaagaggttgtttcc 25463144  T
Q  265 aggacttggacccgtgtcgtttcagtcacatgacaa 300  Q
    |||||||| ||||||| | |||||||||||||||||    
T  25463143 aggacttgaacccgtgacctttcagtcacatgacaa 25463108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 146 - 208
Target Start/End: Original strand, 38755908 - 38755970
Alignment:
Q  146 aaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatt 208  Q
    |||||||| | |||||||| ||||||||| |||||||||||||||||||||||||||||||||    
T  38755908 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatt 38755970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 145 - 311
Target Start/End: Complemental strand, 47444093 - 47443928
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-tt 243  Q
    ||||||||| | | ||||||  |||||||  |||| ||||||||||||||||||||||||||  ||||||||||| ||||||||||    ||||||| ||    
T  47444093 aaaagggcaacccagtgcactgaagctcctgcatatgcagggtccgggaaggggtcccacca--tttggtgtattgtacgcagcct----taccctgttt 47444000  T
Q  244 tttacacaagagaccgtttctaggacttggacccgtgtcgtt----tcagtcacatgacaacaactttacca 311  Q
    ||||| |||||| | ||||| |||||||| ||||||| | ||    || ||||||||| |||||||||||||    
T  47443999 tttacgcaagaggctgtttccaggacttgaacccgtgacctttcggtcggtcacatgagaacaactttacca 47443928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 160 - 316
Target Start/End: Complemental strand, 37494972 - 37494821
Alignment:
Q  160 tgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttttt-acacaagagacc 258  Q
    ||||| ||||||||  |||||||||||||| | |||||||||||||||||  ||| |||| || ||| ||||    ||||||||||| |||||||||       
T  37494972 tgcactaaagctcctgcatacgcagggtcccgaaaggggtcccaccattt--ggtatattgtatgcaacctt----accctgttttttacacaagaggtt 37494879  T
Q  259 gtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgc 316  Q
    ||||| |||||||| ||| ||| | |||||||| |||| |||||||||||||||||||    
T  37494878 gtttccaggacttgaacctgtgacctttcagtcgcatggcaacaactttaccagttgc 37494821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 235 - 319
Target Start/End: Original strand, 17315382 - 17315466
Alignment:
Q  235 taccctgtttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    |||| ||||||||||||||||   ||||| |||| ||| ||||||| | ||||||||||||||||||||||||||| ||||||||    
T  17315382 taccttgtttttacacaagaggttgtttcgaggaattgaacccgtgacctttcagtcacatgacaacaactttaccggttgcgcc 17315466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 146 - 317
Target Start/End: Original strand, 55766466 - 55766632
Alignment:
Q  146 aaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttt 245  Q
    |||||||| | |||||||| ||||||| | |||||||| ||||||||| ||||| ||||||||    ||||||| |||||||||||    |||||||||     
T  55766466 aaagggcatcccggtgcactaaagctctcgcatacgcaaggtccgggatggggttccaccattca--gtgtattgtacgcagcctt----accctgttta 55766559  T
Q  246 tacacaagagaccgtttctaggacttggaccc-gtgtcgtttcagtcacatgacaacaactttaccagttgcg 317  Q
     |||||||| || ||||| |  ||||| |||| ||| | || | |||||||||||||||||||||||||||||    
T  55766560 cacacaagaaactgtttccaaaacttgaaccccgtgaccttccggtcacatgacaacaactttaccagttgcg 55766632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 146 - 209
Target Start/End: Complemental strand, 11394987 - 11394924
Alignment:
Q  146 aaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccattt 209  Q
    |||||||| | |||||||| ||||||||| |||||||||||||||| |||||||||||||||||    
T  11394987 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccggaaaggggtcccaccattt 11394924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 146 - 209
Target Start/End: Complemental strand, 11404714 - 11404651
Alignment:
Q  146 aaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccattt 209  Q
    |||||||| | |||||||| ||||||||| |||||||||||||||| |||||||||||||||||    
T  11404714 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccggaaaggggtcccaccattt 11404651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 145 - 231
Target Start/End: Complemental strand, 25629185 - 25629101
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt 231  Q
    ||||||||| | |||||||| ||||||||| |||| | ||||||||||||||||||||||||  ||||||||||| ||| |||||||    
T  25629185 aaaagggcaacccggtgcactaaagctcccgcatatgtagggtccgggaaggggtcccacca--tttggtgtattgtacacagcctt 25629101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 165 - 308
Target Start/End: Original strand, 32478810 - 32478942
Alignment:
Q  165 caaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttttacacaagagaccgtttct 264  Q
    |||||||||| ||||||| |||||||||||||||||||||||  |||||||||||     ||||||    |||||||||||||||| ||||   |||||     
T  32478810 caaagctcccgcatacgctgggtccgggaaggggtcccacca--tttggtgtatt-----cagcct----taccctgtttttacactagaggttgtttcc 32478898  T
Q  265 aggacttggacccgtgtcgtttcagtcacatgacaacaacttta 308  Q
    |||||||| ||| ||| | | || ||||||||||||||||||||    
T  32478899 aggacttgaacctgtgacctctcggtcacatgacaacaacttta 32478942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 166 - 307
Target Start/End: Original strand, 49938613 - 49938746
Alignment:
Q  166 aaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttttacacaagagaccgtttcta 265  Q
    ||||||||| |||| |||||||  ||||||||||||||||||||| |||||||| ||| |       | ||||| ||||||||||||||| | ||||| |    
T  49938613 aaagctcccgcatatgcagggtatgggaaggggtcccaccatttt-ggtgtattgtacac-------cttaccccgtttttacacaagaggctgtttcca 49938704  T
Q  266 ggacttggacccgtgtcgtttcagtcacatgacaacaacttt 307  Q
    ||||||| ||| ||| | |||||||||| |||||||||||||    
T  49938705 ggacttgaacctgtgacctttcagtcacgtgacaacaacttt 49938746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 147 - 319
Target Start/End: Original strand, 8473621 - 8473788
Alignment:
Q  147 aagggcagctcggtgcaccaaagctccctcatacgcaggg-tccggg-aaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttt 244  Q
    ||||||| | |||||||| ||||||||| |||| |||||| |||||| ||||||||||||||  ||||||||||| || |||||||    ||||||| ||    
T  8473621 aagggcaacccggtgcactaaagctcccgcatatgcaggggtccggggaaggggtcccacca--tttggtgtattgtatgcagcct----taccctg-tt 8473713  T
Q  245 ttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
      ||||||||| | ||||| |||||||| |||||   | || | |||| ||||||||||||||||||||||||||    
T  8473714 aaacacaagaggctgtttccaggacttgaacccgcaaccttccggtcatatgacaacaactttaccagttgcgcc 8473788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 145 - 207
Target Start/End: Complemental strand, 32484369 - 32484307
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccat 207  Q
    ||||||||| | |||||||| ||||||||| |||| |||||||||||||||||||||||||||    
T  32484369 aaaagggcaacccggtgcactaaagctcccgcatatgcagggtccgggaaggggtcccaccat 32484307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 166 - 319
Target Start/End: Complemental strand, 10660520 - 10660371
Alignment:
Q  166 aaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttttt-acacaagagaccgtttct 264  Q
    ||||||||| |||||||||| ||  |||||||||| ||||||| |||||||||| || |||||| |    ||||| ||||| ||| |||||   |||||     
T  10660520 aaagctcccgcatacgcagg-tcttggaaggggtctcaccattattggtgtattgtatgcagccat----accctattttttacataagaggttgtttcc 10660426  T
Q  265 aggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    |||||||| ||  ||  | ||||||||||||||||||||||||||||||||||||    
T  10660425 aggacttgaacatgtaacctttcagtcacatgacaacaactttaccagttgcgcc 10660371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 166 - 319
Target Start/End: Complemental strand, 10874665 - 10874516
Alignment:
Q  166 aaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttttt-acacaagagaccgtttct 264  Q
    ||||||||| |||||||||| ||  |||||||||| ||||||| |||||||||| || |||||| |    ||||| ||||| ||| |||||   |||||     
T  10874665 aaagctcccgcatacgcagg-tcttggaaggggtctcaccattattggtgtattgtatgcagccat----accctattttttacataagaggttgtttcc 10874571  T
Q  265 aggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    |||||||| ||  ||  | ||||||||||||||||||||||||||||||||||||    
T  10874570 aggacttgaacatgtaacctttcagtcacatgacaacaactttaccagttgcgcc 10874516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 146 - 207
Target Start/End: Original strand, 40553937 - 40553998
Alignment:
Q  146 aaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccat 207  Q
    |||||||| | |||||||| ||||||||| ||||||||||||||||||||||||| ||||||    
T  40553937 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcacaccat 40553998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 167 - 231
Target Start/End: Complemental strand, 49796911 - 49796849
Alignment:
Q  167 aagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt 231  Q
    |||||||| |||||||||||| ||||||||||||||||||  ||||||||||| |||||||||||    
T  49796911 aagctcccgcatacgcagggttcgggaaggggtcccacca--tttggtgtattgtacgcagcctt 49796849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 159 - 227
Target Start/End: Complemental strand, 21489210 - 21489143
Alignment:
Q  159 gtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcag 227  Q
    |||||| ||||||||| |||||||||||| |||||||||||||||||| |||||||| ||| |||||||    
T  21489210 gtgcacgaaagctcccgcatacgcagggttcgggaaggggtcccacca-ttttggtgcattgtacgcag 21489143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 145 - 229
Target Start/End: Original strand, 36816383 - 36816466
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcc 229  Q
    ||||||||| | |||| ||| ||||||||| ||||| |||||||| |||||| |||||||| ||||||||||||| |||||||||    
T  36816383 aaaagggcaacccggtacactaaagctcccgcatacacagggtccaggaaggagtcccacc-tttttggtgtattgtacgcagcc 36816466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 145 - 209
Target Start/End: Complemental strand, 38786745 - 38786681
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccattt 209  Q
    ||||||||| | |||||||| | ||||||| |||| |||||||||||||||||||||||||||||    
T  38786745 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccattt 38786681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 157 - 305
Target Start/End: Original strand, 39077807 - 39077948
Alignment:
Q  157 cggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttttacacaagaga 256  Q
    |||||||| | ||||||| |||| ||||||||||| |||  ||| ||||||||  ||| |||| |||||| ||||    |||||||||| |||||||||     
T  39077807 cggtgcactagagctcccgcatatgcagggtccggaaagatgtctcaccattt--ggtatattgtacgcaacctt----accctgtttt-acacaagagg 39077899  T
Q  257 ccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaact 305  Q
    | ||||| |||||||| ||||||| | ||||| ||||||||||||||||    
T  39077900 ctgtttccaggacttgaacccgtgacctttcaatcacatgacaacaact 39077948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 159 - 303
Target Start/End: Original strand, 41018807 - 41018945
Alignment:
Q  159 gtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttttacacaagagacc 258  Q
    |||||| ||||| ||  |||||||| |||| ||||||||||||||| ||||  |||||||| |||| ||||||    |||||  |||||||||||||       
T  41018807 gtgcactaaagcccctccatacgcaaggtctgggaaggggtcccactattt--ggtgtattgtacgtagcctt----accctaattttacacaagaggtt 41018900  T
Q  259 gtttctaggacttggacccgtgtcgtttcagtcacatgacaacaa 303  Q
    ||||| |||||||| ||||||| | |||||||||| |||||||||    
T  41018901 gtttccaggacttgaacccgtgacctttcagtcacgtgacaacaa 41018945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 235 - 319
Target Start/End: Original strand, 42164232 - 42164315
Alignment:
Q  235 taccctgtttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    |||||||||||||||||||||   ||||| | |||||| ||||||| | |||||||||||||||||||| |||||| ||||||||    
T  42164232 taccctgtttttacacaagaggttgtttccaagacttgaacccgtgacctttcagtcacatgacaacaattttacc-gttgcgcc 42164315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 148 - 310
Target Start/End: Original strand, 487128 - 487294
Alignment:
Q  148 agggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccat-------ttttggtgtattttacgcagccttccctaccct 240  Q
    ||||| || |||||||| ||||||||| ||| |||||  |||||||||||||||| ||||       |||| ||||||| |||||||| || |||    |    
T  487128 agggctgcccggtgcactaaagctcccgcattcgcagaatccgggaaggggtcccgccatcccaccattttagtgtattgtacgcagctttacct----t 487223  T
Q  241 gtttt-tacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttacc 310  Q
    ||||| ||||||||||   ||||| | |||||| ||||||| | |||||||||||||||||||||||||||    
T  487224 gttttatacacaagaggttgtttccaagacttgaacccgtgacctttcagtcacatgacaacaactttacc 487294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 145 - 208
Target Start/End: Original strand, 50555655 - 50555718
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatt 208  Q
    ||||||||||| |||||||| ||| ||||  |||||||||||||||||||||||| ||||||||    
T  50555655 aaaagggcagcccggtgcactaaaactcctgcatacgcagggtccgggaaggggttccaccatt 50555718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 146 - 208
Target Start/End: Complemental strand, 25388311 - 25388249
Alignment:
Q  146 aaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatt 208  Q
    |||||||| | |||||||| |||||||   |||||||||||||||||||||||||||||||||    
T  25388311 aaagggcaacccggtgcactaaagctcatgcatacgcagggtccgggaaggggtcccaccatt 25388249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 149 - 210
Target Start/End: Complemental strand, 36589876 - 36589815
Alignment:
Q  149 gggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttt 210  Q
    ||||||| |||||||||||||||||| |||||  ||||| | ||||||||||||||||||||    
T  36589876 gggcagcccggtgcaccaaagctcccgcatacatagggttcaggaaggggtcccaccatttt 36589815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 166 - 310
Target Start/End: Original strand, 39029080 - 39029220
Alignment:
Q  166 aaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-tttttacacaagagaccgtttct 264  Q
    ||||||||| |||| ||||||||||| ||| |||||||||| |||| ||||||| ||| ||||||    ||||||| |||||||||||||| | |||||     
T  39029080 aaagctcccgcatatgcagggtccggaaagtggtcccacca-ttttcgtgtattgtacacagcct----taccctgttttttacacaagaggctgtttcc 39029174  T
Q  265 aggacttggacccgtgtcgtttcagtcacatgacaacaactttacc 310  Q
    | | |||| |||  || | ||| ||||||| |||||||||||||||    
T  39029175 aaggcttgaacctatgaccttttagtcacacgacaacaactttacc 39029220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 165 - 309
Target Start/End: Original strand, 3580859 - 3580994
Alignment:
Q  165 caaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccct-gtttttacacaagagaccgtttc 263  Q
    |||||||||| |||| ||||||||||||||||||||| | ||  |||||||||||  || ||||||    |||| | |||||||||||||||   |||||    
T  3580859 caaagctcccacatatgcagggtccgggaaggggtcctagca--tttggtgtattgcacacagcct----taccatggtttttacacaagag---gtttc 3580949  T
Q  264 taggacttggacccgtgtcgtttcagtcacatgacaacaactttac 309  Q
     | |||||| || |||| | ||||||||||||||||||||||||||    
T  3580950 ca-gacttgaactcgtgacttttcagtcacatgacaacaactttac 3580994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 303
Target Start/End: Original strand, 7385499 - 7385628
Alignment:
Q  169 gctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttttt-acacaagagaccgtttctagg 267  Q
    |||||| ||||| ||||||||||||| ||||||||||||||  ||||||||  || || ||||    ||||| ||||| ||||| ||| | ||||| |||    
T  7385499 gctcccgcatacacagggtccgggaaagggtcccaccattt--ggtgtattgcacacaacctt----accctattttttacacatgaggctgtttccagg 7385592  T
Q  268 acttggacccgtgtcgtttcagtcacatgacaacaa 303  Q
     |||| ||||||| | ||||||||||||||||||||    
T  7385593 gcttgaacccgtgacctttcagtcacatgacaacaa 7385628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 157 - 228
Target Start/End: Complemental strand, 16494343 - 16494272
Alignment:
Q  157 cggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagc 228  Q
    |||| ||| |||||| || ||||| ||||||| ||||| |||||||||||||||||||||||| || |||||    
T  16494343 cggtacactaaagcttccgcatacacagggtctgggaaagggtcccaccatttttggtgtattgtatgcagc 16494272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 35532128 - 35532077
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaagg 196  Q
    ||||||||| | |||||||| ||||||||| |||||||||||||||||||||    
T  35532128 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaagg 35532077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 149 - 319
Target Start/End: Complemental strand, 54967151 - 54966989
Alignment:
Q  149 gggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-ttttta 247  Q
    ||||||| |||||||| ||||||||| |||| | ||||| ||||||||||||||||||  |||||| |||| || ||| |||    ||||||| ||||||    
T  54967151 gggcagcccggtgcac-aaagctcccgcatatgtagggtacgggaaggggtcccacca--tttggtatattgta-gcaacct----taccctgtttttta 54967060  T
Q  248 cacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    ||||||||    |||| || ||||| ||  ||| | ||||||||||||||||||||||||||| ||||||||    
T  54967059 cacaagaggttctttccagaacttgaacatgtgacctttcagtcacatgacaacaactttacc-gttgcgcc 54966989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 170 - 301
Target Start/End: Original strand, 32629293 - 32629418
Alignment:
Q  170 ctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttttacacaagagaccgtttctaggac 269  Q
    ||||| |||||||| |||||||||||||||||| ||| ||| ||||||| | | || |||||    |||||||||||  ||||||| | ||||| ||||     
T  32629293 ctcccacatacgcaaggtccgggaaggggtcccgccaattt-ggtgtatgt-aggcggcctt----accctgtttttttacaagaggctgtttcgaggat 32629386  T
Q  270 ttggacccgtgtcgtttcagtcacatgacaac 301  Q
    ||| ||||||| | ||||||||||||||||||    
T  32629387 ttgaacccgtgacctttcagtcacatgacaac 32629418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 145 - 206
Target Start/End: Complemental strand, 19028047 - 19027986
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccacca 206  Q
    ||||||||||| |||||||| ||||||||| |||| |  ||||||||||||| |||||||||    
T  19028047 aaaagggcagcccggtgcactaaagctcccgcataagtggggtccgggaaggagtcccacca 19027986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 166 - 219
Target Start/End: Original strand, 30581485 - 30581537
Alignment:
Q  166 aaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtatt 219  Q
    ||||||||  |||| |||||||||||||||||||||||||| ||||||||||||    
T  30581485 aaagctcctacatatgcagggtccgggaaggggtcccacca-ttttggtgtatt 30581537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 166 - 207
Target Start/End: Complemental strand, 44718682 - 44718641
Alignment:
Q  166 aaagctccctcatacgcagggtccgggaaggggtcccaccat 207  Q
    ||||||||| ||||||||||||| ||||||||||||||||||    
T  44718682 aaagctcccgcatacgcagggtctgggaaggggtcccaccat 44718641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 209
Target Start/End: Complemental strand, 28494287 - 28494223
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccattt 209  Q
    |||| |||||| |||||||| | ||||||| |||| ||||| || ||||||||||||||||||||    
T  28494287 aaaaaggcagcccggtgcactagagctcccgcatatgcaggatctgggaaggggtcccaccattt 28494223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 145 - 231
Target Start/End: Original strand, 9987833 - 9987917
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt 231  Q
    |||| |||||| |||||||  ||||||||| |||| ||| ||||  ||||||||||||||||  ||||||||||| || ||||||||    
T  9987833 aaaaaggcagcccggtgcattaaagctcccgcatatgcaaggtcaaggaaggggtcccacca--tttggtgtattgtatgcagcctt 9987917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 319
Target Start/End: Original strand, 5313108 - 5313162
Alignment:
Q  265 aggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    |||| ||| ||||||| | ||||| ||||||||||||||||||||||||| ||||    
T  5313108 aggaattgaacccgtgacctttcaatcacatgacaacaactttaccagttacgcc 5313162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 298
Target Start/End: Complemental strand, 7038189 - 7038041
Alignment:
Q  144 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt-ccctaccctgt 242  Q
    |||||||||| | | |||||| |||||||| | |||||||||||||||| ||| | ||||||| |||||||||||| |||| || ||| |||||     |    
T  7038189 taaaagggcaacccagtgcactaaagctccgt-atacgcagggtccgggtaggtgccccacca-ttttggtgtattgtacgaagtcttacccta----tt 7038096  T
Q  243 ttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgac 298  Q
    ||||||||||||  | ||||| |||||||| ||| ||| | |||||||||||||||    
T  7038095 ttttacacaagaagctgtttc-aggacttgaacctgtgacctttcagtcacatgac 7038041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 319
Target Start/End: Complemental strand, 18969738 - 18969708
Alignment:
Q  289 gtcacatgacaacaactttaccagttgcgcc 319  Q
    |||||||||||||||||||||||||||||||    
T  18969738 gtcacatgacaacaactttaccagttgcgcc 18969708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 227
Target Start/End: Complemental strand, 2813242 - 2813181
Alignment:
Q  166 aaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcag 227  Q
    ||||||||| ||||||||  || |||||| ||||||||||||| ||| |||||| |||||||    
T  2813242 aaagctcccgcatacgcatcgttcgggaaagggtcccaccattattgatgtattgtacgcag 2813181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 35894492 - 35894540
Alignment:
Q  177 atacgcagggtccgggaaggggtcccaccatttttggtgtattttacgca 226  Q
    ||||||| | |||||||||||||||||||| |||||||||||| ||||||    
T  35894492 atacgcatgatccgggaaggggtcccacca-ttttggtgtattgtacgca 35894540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 310
Target Start/End: Complemental strand, 43035289 - 43035224
Alignment:
Q  245 ttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttacc 310  Q
    |||||||||||   |||||  ||||||| ||||||| | |||||||||| ||||||||||||||||    
T  43035289 ttacacaagaggttgtttcctggacttgaacccgtgacctttcagtcacgtgacaacaactttacc 43035224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 319
Target Start/End: Original strand, 54640430 - 54640506
Alignment:
Q  242 tttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    |||||||||||||| | ||||| | |||||| ||||||| | |||||| ||| ||||||||| |||||| ||||||||    
T  54640430 tttttacacaagaggctgtttccaagacttgaacccgtgacctttcagccacgtgacaacaattttacc-gttgcgcc 54640506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 176 - 208
Target Start/End: Complemental strand, 8820613 - 8820581
Alignment:
Q  176 catacgcagggtccgggaaggggtcccaccatt 208  Q
    ||||||||||||| |||||||||||||||||||    
T  8820613 catacgcagggtctgggaaggggtcccaccatt 8820581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 246 - 310
Target Start/End: Original strand, 12257688 - 12257752
Alignment:
Q  246 tacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttacc 310  Q
    |||||||||  | |||||||||| ||| ||||||| | ||||| |||| ||||||||||||||||    
T  12257688 tacacaagacgctgtttctaggatttgaacccgtgacctttcaatcacgtgacaacaactttacc 12257752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 259 - 319
Target Start/End: Original strand, 50856344 - 50856403
Alignment:
Q  259 gtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    |||||||||||||| ||||||| | ||||| |||  |||||||||||||||| ||||||||    
T  50856344 gtttctaggacttgaacccgtgacctttcaatcatgtgacaacaactttacc-gttgcgcc 50856403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 83; Significance: 3e-39; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 145 - 319
Target Start/End: Complemental strand, 30713 - 30546
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttt 244  Q
    ||||||||| | |||||||| | ||||||| |||| |||||||||||||||||||||||||||||  |||||||| |||||||||    |||||||||||    
T  30713 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccattt--ggtgtattgtacgcagcc----ctaccctgttt 30620  T
Q  245 ttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    | ||||||||| | ||||| |||||||| ||| ||| | ||||||||||||||||||||||||||||||||||||    
T  30619 t-acacaagaggctgtttccaggacttgaaccggtgacctttcagtcacatgacaacaactttaccagttgcgcc 30546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 145 - 319
Target Start/End: Original strand, 13023 - 13191
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttt 244  Q
    ||||||||| | |||||||| ||||| ||| ||||||||||||| |||||||||||||||||||   |||||||| ||||||||||| |||    |||||    
T  13023 aaaagggcaacccggtgcactaaagcccccgcatacgcagggtctgggaaggggtcccaccattc--ggtgtattgtacgcagccttacct----tgttt 13116  T
Q  245 ttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    |||| |||||| | ||||| |||||||| ||| ||| | ||||||||||||||||||||||||||| ||||||||    
T  13117 ttacgcaagaggctgtttccaggacttgaaccggtgacctttcagtcacatgacaacaactttaccggttgcgcc 13191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 146 - 316
Target Start/End: Complemental strand, 59114 - 58947
Alignment:
Q  146 aaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-ttt 244  Q
    |||||||| | || ||||| ||||||||| ||||||||| ||| |||||||||||||||||||||||||||||| ||||||| ||    ||||||| |||    
T  59114 aaagggcaacccgatgcactaaagctcccgcatacgcagagtctgggaaggggtcccaccatttttggtgtattgtacgcagtct----taccctgtttt 59019  T
Q  245 ttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgc 316  Q
    ||| ||||||| | ||||| |||||||| ||||||| | ||||||||||||||||| || ||||||||||||    
T  59018 ttatacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaataagtttaccagttgc 58947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 68; Significance: 2e-30; HSPs: 4)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 145 - 319
Target Start/End: Complemental strand, 46967 - 46798
Alignment:
Q  145 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt-ccctaccctgtt 243  Q
    ||||||||| | |||||||| ||||||||| |||||||||||||||||||||||||||||||  ||||||||||| |||||| |||| |||||     ||    
T  46967 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccacca--tttggtgtattgtacgcaaccttacccta----ttt 46874  T
Q  244 tttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    ||||||||||||   ||||| || ||||| ||||||| | ||  |||||||||||||||||||||||| |||||||    
T  46873 tttacacaagaggttgtttccagcacttgaacccgtgaccttctagtcacatgacaacaactttaccaattgcgcc 46798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 160 - 319
Target Start/End: Original strand, 24786 - 24935
Alignment:
Q  160 tgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-tttttacacaagagacc 258  Q
    ||||| ||||||||| |||||||||||| ||||||||||||||||||  |||||||| || ||||||||||    ||||||| |||||||||||||| |     
T  24786 tgcactaaagctcccgcatacgcagggttcgggaaggggtcccacca--tttggtgtgttgtacgcagcct----taccctgttttttacacaagaggct 24879  T
Q  259 gtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    |||     |||||| |||| || | ||||||||||||||||||||||||||||||||||||    
T  24880 gtt-----gacttgaacccatgacctttcagtcacatgacaacaactttaccagttgcgcc 24935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 144 - 231
Target Start/End: Complemental strand, 43795 - 43709
Alignment:
Q  144 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaa-ggggtcccaccatttttggtgtattttacgcagcctt 231  Q
    |||||||||| ||| |||||| | ||||||| |||| |||||||||| ||| |||||||||||||||  |||||||| |||||||||||    
T  43795 taaaagggcaactcagtgcactagagctcccgcatatgcagggtccgagaaaggggtcccaccattt--ggtgtattgtacgcagcctt 43709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 166 - 210
Target Start/End: Original strand, 46727 - 46771
Alignment:
Q  166 aaagctccctcatacgcagggtccgggaaggggtcccaccatttt 210  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||    
T  46727 aaagctcccgcatacgcagggtctgggaaggggtcccaccatttt 46771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 159 - 316
Target Start/End: Complemental strand, 10932 - 10780
Alignment:
Q  159 gtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-tttttacacaagagac 257  Q
    |||||| ||||||||| |||||||||||||||||||||||||||||||  |||||||||||  ||||||    |||||||||| ||||||||||||||      
T  10932 gtgcactaaagctcccgcatacgcagggtccgggaaggggtcccacca--tttggtgtattggacgcag----ccctaccctgttttttacacaagaggt 10839  T
Q  258 cgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgc 316  Q
     ||||  ||  |||| ||||||| | || ||||||||||||||||||||||||||||||    
T  10838 tgttttcagaccttgaacccgtgaccttccagtcacatgacaacaactttaccagttgc 10780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 62; Significance: 9e-27; HSPs: 4)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 176 - 317
Target Start/End: Original strand, 10080 - 10214
Alignment:
Q  176 catacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttttacacaagagaccgtttctaggacttggac 275  Q
    |||| ||||||||||||||||||||||||  | ||||||||||| ||||||| ||    ||| ||| ||||||||||||| | ||||| |||||||| ||    
T  10080 catatgcagggtccgggaaggggtcccac--tatttggtgtattgtacgcagtct----tactctg-ttttacacaagaggctgtttccaggacttgaac 10172  T
Q  276 ccgtgtcgtttcagtcacatgacaacaactttaccagttgcg 317  Q
    ||||| | ||||||||||||||||||||||||||||||||||    
T  10173 ccgtgacctttcagtcacatgacaacaactttaccagttgcg 10214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #2
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 176 - 317
Target Start/End: Original strand, 20408 - 20542
Alignment:
Q  176 catacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttttacacaagagaccgtttctaggacttggac 275  Q
    |||| ||||||||||||||||||||||||  | ||||||||||| ||||||| ||    ||| ||| ||||||||||||| | ||||| |||||||| ||    
T  20408 catatgcagggtccgggaaggggtcccac--tatttggtgtattgtacgcagtct----tactctg-ttttacacaagaggctgtttccaggacttgaac 20500  T
Q  276 ccgtgtcgtttcagtcacatgacaacaactttaccagttgcg 317  Q
    ||||| | ||||||||||||||||||||||||||||||||||    
T  20501 ccgtgacctttcagtcacatgacaacaactttaccagttgcg 20542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 319
Target Start/End: Complemental strand, 8964 - 8912
Alignment:
Q  267 gacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    |||||| ||| ||| | ||||||||||||||||||||||| ||| ||||||||    
T  8964 gacttgaacctgtgacatttcagtcacatgacaacaacttcaccggttgcgcc 8912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 319
Target Start/End: Complemental strand, 19292 - 19240
Alignment:
Q  267 gacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    |||||| ||| ||| | ||||||||||||||||||||||| ||| ||||||||    
T  19292 gacttgaacctgtgacatttcagtcacatgacaacaacttcaccggttgcgcc 19240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1176 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold1176
Description:

Target: scaffold1176; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 158 - 317
Target Start/End: Original strand, 1599 - 1751
Alignment:
Q  158 ggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttttacacaagagac 257  Q
    ||||||| ||||||||| ||||||| |||||||||||||||||||| ||  ||||||||||| || |||||||    || |||| |||||||||||||      
T  1599 ggtgcactaaagctcccgcatacgccgggtccgggaaggggtcccatca--tttggtgtattgtatgcagcct----tatcctg-ttttacacaagaggt 1691  T
Q  258 cgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcg 317  Q
     ||||  |||||||| |||| || | |||||||||||||||||||||||||||| |||||    
T  1692 tgttttcaggacttgaacccatgacctttcagtcacatgacaacaactttaccaattgcg 1751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 158 - 319
Target Start/End: Complemental strand, 11252 - 11099
Alignment:
Q  158 ggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttttacacaagagac 257  Q
    ||||||| | ||||||| |||| |||||||||||||||| ||||||||||||  |||||||| || |||||||| | |    |||||| ||||||||| |    
T  11252 ggtgcactagagctcccgcatatgcagggtccgggaaggtgtcccaccattt--ggtgtattgtaagcagccttactt----tgtttt-acacaagaggc 11160  T
Q  258 cgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
     ||||| |||||||| ||||||| | |||||||||||| | |||||||||||||||||||||    
T  11159 tgtttccaggacttgaacccgtgacctttcagtcacat-agaacaactttaccagttgcgcc 11099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 183 - 318
Target Start/End: Complemental strand, 4258 - 4125
Alignment:
Q  183 agggtccgggaaggggtcccaccattt-ttggtgtattttacgcagccttccctaccctgt-ttttacacaagagaccgtttctaggacttggacccgtg 280  Q
    |||||||||||||||||||||||| || |||||||||| |||||| ||||    | ||||| |||||||||||||   ||||| |||||||| |||||||    
T  4258 agggtccgggaaggggtcccaccaattattggtgtattgtacgcaacctt----atcctgtattttacacaagaggttgtttccaggacttgaacccgtg 4163  T
Q  281 tcgtttcagtcacatgacaacaactttaccagttgcgc 318  Q
     | |||||||||||| ||||||||||||| ||||||||    
T  4162 acctttcagtcacataacaacaactttactagttgcgc 4125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 242 - 319
Target Start/End: Original strand, 226497 - 226574
Alignment:
Q  242 tttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    |||||| ||||||| | |||||||||||||| | ||||| | ||||||||||||||||||||||||||||||||||||    
T  226497 tttttagacaagaggctgtttctaggacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgcc 226574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 144 - 231
Target Start/End: Original strand, 48632 - 48717
Alignment:
Q  144 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt 231  Q
    |||||||||| | |||||||| | ||||||| |||| ||||||||||||||||||||||||||  ||||||||||| |||||||||||    
T  48632 taaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccacca--tttggtgtattgtacgcagcctt 48717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 158 - 319
Target Start/End: Original strand, 72879 - 73029
Alignment:
Q  158 ggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-tttttacacaagaga 256  Q
    ||||||| ||||||||| |||||||||| ||||||||||||| | ||||  ||||||||||| || |||||||    |||| || |||||||||||||||    
T  72879 ggtgcactaaagctcccgcatacgcaggttccgggaaggggtactacca--tttggtgtattgtaggcagcct----taccgtgttttttacacaagaga 72972  T
Q  257 c-cgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    |  |||||||||||||| |||||||       |  |||||||||||||||||||||||||||||    
T  72973 cttgtttctaggacttgaacccgtg-------acacacatgacaacaactttaccagttgcgcc 73029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 157 - 231
Target Start/End: Original strand, 24144 - 24216
Alignment:
Q  157 cggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt 231  Q
    |||||||| | ||||||| |||| ||||||||||||||||||||||||||  ||||||||||| |||||||||||    
T  24144 cggtgcactagagctcccgcatatgcagggtccgggaaggggtcccacca--tttggtgtattgtacgcagcctt 24216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 318
Target Start/End: Complemental strand, 43176 - 43097
Alignment:
Q  239 ctgtttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgc 318  Q
    ||||||||||||||||| | ||||||||||| || || |||| | ||||| ||||||||||| |||||||||||||||||    
T  43176 ctgtttttacacaagaggctgtttctaggacctgaactcgtgacctttcaatcacatgacaataactttaccagttgcgc 43097  T

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Target: scaffold0036 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 177 - 316
Target Start/End: Original strand, 35048 - 35184
Alignment:
Q  177 atacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttttacac--aagagaccgtttctaggacttgga 274  Q
    ||||||| | ||| |||| ||||||||||||||  |||||||| |||||||||||    |||||||||| ||||  ||||||| ||||  |||||||| |    
T  35048 atacgcaagatccaggaaagggtcccaccattt--ggtgtattgtacgcagcctt----accctgttttcacacacaagagactgttttcaggacttgaa 35141  T
Q  275 cccgtgtcgtttcagtcacatgacaa-caactttaccagttgc 316  Q
    |||||| | || ||||||||||||||  |||||||||||||||    
T  35142 cccgtgaccttacagtcacatgacaataaactttaccagttgc 35184  T

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Target: scaffold0954 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0954
Description:

Target: scaffold0954; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 146 - 231
Target Start/End: Complemental strand, 3679 - 3596
Alignment:
Q  146 aaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt 231  Q
    |||||| | |||||||||| |||||| || |||||||||||| ||||||||||||||| ||  || |||||||| |||||||||||    
T  3679 aaagggaaactcggtgcactaaagctgccgcatacgcagggttcgggaaggggtcccatca--ttcggtgtattatacgcagcctt 3596  T

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Target: scaffold0024 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 267 - 319
Target Start/End: Complemental strand, 83894 - 83842
Alignment:
Q  267 gacttggacccgtgtcgtttcagtcacatgacaacaactttaccagttgcgcc 319  Q
    |||||| ||||||| | |||||||||||||||||||||||||| |||||||||    
T  83894 gacttgaacccgtgacctttcagtcacatgacaacaactttactagttgcgcc 83842  T

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Target: scaffold0116 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 312
Target Start/End: Complemental strand, 8938 - 8865
Alignment:
Q  239 ctgtttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttaccag 312  Q
    ||||||||||||||||    ||||| |||| ||| ||| ||| | || ||||||||||||||||||||||||||    
T  8938 ctgtttttacacaagaagttgtttccaggaattgaacctgtgaccttacagtcacatgacaacaactttaccag 8865  T

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Target: scaffold0167 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 165 - 209
Target Start/End: Complemental strand, 23715 - 23671
Alignment:
Q  165 caaagctccctcatacgcagggtccgggaaggggtcccaccattt 209  Q
    |||||||||| ||||| || |||| ||||||||||||||||||||    
T  23715 caaagctcccacatactcaaggtctgggaaggggtcccaccattt 23671  T

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