View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11732_high_23 (Length: 312)
Name: NF11732_high_23
Description: NF11732
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11732_high_23 |
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Alignment Details
Target: chr2 (Bit Score: 251; Significance: 1e-139; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 24 - 303
Target Start/End: Original strand, 37169129 - 37169408
Alignment:
| Q |
24 |
tctcaaaccaatttctgttatgtcattgtatctacagtggtcctgtcaaaacgtgccacttgtgcggccatgcacgaatagacatagttgatcacgcctg |
123 |
Q |
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| T |
37169129 |
tctcaaaccaatttctgttatgtcattgtatctacagtgatcctgtcaaaacgtgccacttgtgcggccatgcacgaatagacatagttgatcacgcctg |
37169228 |
T |
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| Q |
124 |
ggaagcaaacagtggaagaagatgctacataatactcgaacctgtggagttattgagcttttctttgcaaacataagtccatgtgttaaataatttcaat |
223 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37169229 |
ggaagcaaacagtggaagaagatgctacataatactcgaacctgtggagttattgagcttttctttgcaaacataagtccatgtgttaaataatttcaat |
37169328 |
T |
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| Q |
224 |
gtatggtcatcctccataatcctgcacctcacgcttcatcctatcctttcnnnnnnnccctataattatttgatgtccat |
303 |
Q |
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|||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
37169329 |
gtattgtcatcctccataatcctgcacctcacgcttcatcctatcctttcattttttccctataattatttgatgtccat |
37169408 |
T |
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