View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11732_low_1 (Length: 945)

Name: NF11732_low_1
Description: NF11732
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11732_low_1
NF11732_low_1
[»] chr2 (48 HSPs)
chr2 (1-559)||(37335271-37335829)
chr2 (471-704)||(9293379-9293613)
chr2 (473-704)||(23267866-23268097)
chr2 (458-704)||(3989091-3989337)
chr2 (475-704)||(31174639-31174867)
chr2 (473-704)||(7475312-7475543)
chr2 (471-704)||(10661915-10662149)
chr2 (471-704)||(35160785-35161020)
chr2 (473-704)||(33380237-33380468)
chr2 (810-927)||(37335893-37336010)
chr2 (473-704)||(21393490-21393723)
chr2 (473-704)||(43330942-43331173)
chr2 (475-704)||(9723437-9723668)
chr2 (471-704)||(13354874-13355109)
chr2 (471-670)||(21936109-21936310)
chr2 (497-684)||(16767285-16767483)
chr2 (475-670)||(14941201-14941399)
chr2 (475-601)||(27847664-27847790)
chr2 (478-600)||(22591517-22591639)
chr2 (612-704)||(22592880-22592974)
chr2 (622-692)||(37335824-37335894)
chr2 (636-701)||(10661899-10661964)
chr2 (636-701)||(35160769-35160834)
chr2 (622-670)||(34320994-34321042)
chr2 (517-601)||(40262643-40262727)
chr2 (636-701)||(7475496-7475561)
chr2 (636-701)||(9293564-9293629)
chr2 (636-701)||(9723417-9723482)
chr2 (636-701)||(14941354-14941419)
chr2 (636-701)||(21393676-21393741)
chr2 (636-701)||(21936093-21936158)
chr2 (636-701)||(23268050-23268115)
chr2 (636-701)||(31174822-31174887)
chr2 (636-701)||(33380219-33380284)
chr2 (636-701)||(43330924-43330989)
chr2 (703-749)||(9154164-9154210)
chr2 (636-685)||(3989104-3989153)
chr2 (703-760)||(12457018-12457075)
chr2 (636-701)||(13354858-13354923)
chr2 (636-701)||(27847644-27847709)
chr2 (703-748)||(33810617-33810662)
chr2 (703-760)||(36887339-36887396)
chr2 (703-760)||(41877555-41877612)
chr2 (471-520)||(43331106-43331155)
chr2 (471-521)||(22592905-22592955)
chr2 (703-748)||(12890265-12890310)
chr2 (475-520)||(33380401-33380446)
chr2 (475-520)||(35160953-35160998)
[»] chr4 (64 HSPs)
chr4 (471-704)||(21802124-21802359)
chr4 (458-704)||(9088885-9089131)
chr4 (458-704)||(17655445-17655692)
chr4 (473-704)||(36073380-36073610)
chr4 (475-704)||(53123063-53123292)
chr4 (473-704)||(24128269-24128500)
chr4 (473-704)||(44893456-44893687)
chr4 (473-704)||(47290096-47290327)
chr4 (458-704)||(37219640-37219893)
chr4 (478-704)||(44893017-44893243)
chr4 (471-704)||(2624865-2625098)
chr4 (475-704)||(46441876-46442105)
chr4 (471-704)||(10442591-10442826)
chr4 (471-704)||(4751474-4751708)
chr4 (471-704)||(49387691-49387925)
chr4 (471-704)||(7744916-7745149)
chr4 (471-704)||(31078623-31078856)
chr4 (471-704)||(36072975-36073212)
chr4 (471-704)||(37934745-37934978)
chr4 (458-685)||(30563224-30563452)
chr4 (473-704)||(50156383-50156613)
chr4 (471-704)||(22199289-22199520)
chr4 (471-704)||(42671697-42671930)
chr4 (473-704)||(24392697-24392935)
chr4 (471-703)||(23964269-23964502)
chr4 (471-704)||(33530488-33530725)
chr4 (475-704)||(44744467-44744690)
chr4 (615-704)||(11314055-11314144)
chr4 (475-601)||(36073650-36073776)
chr4 (636-701)||(7745100-7745165)
chr4 (636-701)||(33530676-33530741)
chr4 (710-760)||(4473076-4473126)
chr4 (636-701)||(10442777-10442842)
chr4 (636-701)||(23964453-23964518)
chr4 (636-701)||(31078807-31078872)
chr4 (703-760)||(32564847-32564904)
chr4 (620-693)||(36073276-36073349)
chr4 (636-701)||(42671681-42671746)
chr4 (636-701)||(49387876-49387941)
chr4 (487-558)||(11314184-11314255)
chr4 (636-701)||(2624849-2624914)
chr4 (636-701)||(21802310-21802375)
chr4 (636-701)||(22199273-22199338)
chr4 (636-701)||(24392679-24392744)
chr4 (659-704)||(25063378-25063423)
chr4 (636-701)||(36072959-36073024)
chr4 (636-701)||(47290078-47290143)
chr4 (636-701)||(50156566-50156631)
chr4 (471-515)||(25063397-25063441)
chr4 (636-700)||(36073731-36073795)
chr4 (636-701)||(4751458-4751523)
chr4 (703-760)||(7209058-7209115)
chr4 (636-701)||(24128251-24128316)
chr4 (636-701)||(36073362-36073427)
chr4 (636-701)||(44893438-44893503)
chr4 (636-701)||(46441856-46441921)
chr4 (475-520)||(47290260-47290305)
chr4 (636-701)||(44893201-44893267)
chr4 (636-701)||(53123042-53123108)
chr4 (636-685)||(9088898-9088947)
chr4 (475-520)||(36073543-36073588)
chr4 (471-520)||(37219825-37219874)
chr4 (475-520)||(46442038-46442083)
chr4 (475-520)||(49387713-49387758)
[»] chr1 (50 HSPs)
chr1 (471-704)||(44094726-44094958)
chr1 (473-704)||(36966512-36966743)
chr1 (471-704)||(40215016-40215249)
chr1 (473-701)||(19015434-19015662)
chr1 (473-704)||(37821638-37821869)
chr1 (475-704)||(6883519-6883748)
chr1 (471-704)||(25973442-25973668)
chr1 (475-704)||(25463708-25463937)
chr1 (473-704)||(9910095-9910328)
chr1 (473-704)||(41876246-41876477)
chr1 (473-704)||(51737535-51737766)
chr1 (471-704)||(33786435-33786672)
chr1 (471-704)||(3559645-3559878)
chr1 (471-704)||(18404470-18404709)
chr1 (471-701)||(27523062-27523292)
chr1 (473-704)||(32000070-32000302)
chr1 (473-704)||(40273732-40273969)
chr1 (482-704)||(44690825-44691055)
chr1 (517-704)||(20304934-20305122)
chr1 (458-701)||(10167415-10167658)
chr1 (471-560)||(16045746-16045835)
chr1 (636-704)||(19722903-19722970)
chr1 (636-704)||(40273711-40273779)
chr1 (636-699)||(27523243-27523306)
chr1 (636-701)||(16045786-16045851)
chr1 (636-701)||(25463688-25463753)
chr1 (636-701)||(32000255-32000320)
chr1 (636-701)||(40215000-40215065)
chr1 (636-704)||(33786623-33786690)
chr1 (640-704)||(52064381-52064445)
chr1 (636-701)||(3559629-3559694)
chr1 (636-701)||(18404454-18404519)
chr1 (636-701)||(44094710-44094775)
chr1 (471-515)||(44690844-44690888)
chr1 (636-701)||(9910281-9910346)
chr1 (636-701)||(19015416-19015481)
chr1 (471-520)||(32000088-32000137)
chr1 (471-520)||(33786453-33786502)
chr1 (636-701)||(36966696-36966761)
chr1 (636-701)||(37821822-37821887)
chr1 (471-520)||(40273902-40273951)
chr1 (640-701)||(41876434-41876495)
chr1 (475-559)||(34519790-34519874)
chr1 (519-601)||(52329345-52329426)
chr1 (612-670)||(52329445-52329503)
chr1 (636-701)||(6883499-6883564)
chr1 (475-520)||(9910117-9910162)
chr1 (475-520)||(19015598-19015643)
chr1 (636-701)||(25973426-25973490)
chr1 (475-520)||(51737699-51737744)
[»] chr7 (48 HSPs)
chr7 (471-704)||(4974539-4974772)
chr7 (471-704)||(45637740-45637972)
chr7 (475-718)||(29737171-29737420)
chr7 (458-704)||(30848584-30848830)
chr7 (486-704)||(42696126-42696345)
chr7 (471-704)||(42611839-42612072)
chr7 (471-704)||(48880731-48880964)
chr7 (471-704)||(3962007-3962239)
chr7 (473-704)||(15238412-15238645)
chr7 (471-704)||(24395000-24395232)
chr7 (473-704)||(37476884-37477115)
chr7 (471-704)||(15329301-15329535)
chr7 (475-704)||(34482867-34483099)
chr7 (473-704)||(18037008-18037238)
chr7 (471-704)||(20009902-20010134)
chr7 (471-704)||(15577651-15577887)
chr7 (475-704)||(25167660-25167883)
chr7 (473-599)||(35444588-35444714)
chr7 (471-601)||(36790373-36790503)
chr7 (612-704)||(35445567-35445658)
chr7 (471-587)||(40880713-40880829)
chr7 (612-704)||(35876414-35876505)
chr7 (636-701)||(3961991-3962056)
chr7 (636-701)||(15329285-15329350)
chr7 (636-701)||(48880915-48880980)
chr7 (636-701)||(4974723-4974788)
chr7 (636-701)||(18036990-18037055)
chr7 (636-701)||(34482847-34482912)
chr7 (636-701)||(42611823-42611888)
chr7 (636-701)||(45637724-45637789)
chr7 (639-701)||(15577841-15577903)
chr7 (636-701)||(36790454-36790519)
chr7 (636-701)||(37477068-37477133)
chr7 (471-520)||(42696277-42696326)
chr7 (659-701)||(24394984-24395026)
chr7 (702-748)||(28885512-28885558)
chr7 (471-520)||(18037171-18037220)
chr7 (636-701)||(20010086-20010150)
chr7 (458-515)||(20953112-20953169)
chr7 (636-701)||(25167838-25167903)
chr7 (636-701)||(29737151-29737216)
chr7 (636-701)||(35444570-35444635)
chr7 (701-743)||(32553681-32553723)
chr7 (636-701)||(15238394-15238459)
chr7 (475-520)||(25167682-25167727)
chr7 (636-685)||(30848597-30848646)
chr7 (475-520)||(30848763-30848808)
chr7 (648-701)||(36790283-36790336)
[»] chr8 (80 HSPs)
chr8 (471-704)||(34665410-34665642)
chr8 (471-704)||(32064773-32065007)
chr8 (471-704)||(20091605-20091838)
chr8 (473-704)||(17841654-17841885)
chr8 (475-704)||(6108037-6108266)
chr8 (471-704)||(37985860-37986092)
chr8 (473-704)||(40779933-40780164)
chr8 (467-704)||(3596845-3597082)
chr8 (471-704)||(42754846-42755079)
chr8 (475-704)||(25581043-25581272)
chr8 (471-701)||(32393886-32394114)
chr8 (471-704)||(26041917-26042153)
chr8 (471-704)||(15187588-15187821)
chr8 (478-704)||(30834859-30835077)
chr8 (473-701)||(35353071-35353299)
chr8 (473-704)||(31347580-31347817)
chr8 (471-704)||(1645768-1646002)
chr8 (473-704)||(7022008-7022240)
chr8 (462-704)||(3890418-3890662)
chr8 (475-704)||(24844664-24844891)
chr8 (473-681)||(8453864-8454072)
chr8 (471-704)||(14128892-14129120)
chr8 (471-702)||(39772608-39772838)
chr8 (475-601)||(7017772-7017898)
chr8 (486-685)||(41819590-41819800)
chr8 (471-598)||(27782027-27782154)
chr8 (541-704)||(37132484-37132643)
chr8 (471-601)||(24211460-24211590)
chr8 (540-704)||(30055614-30055777)
chr8 (490-704)||(10044390-10044609)
chr8 (475-667)||(27835293-27835486)
chr8 (458-563)||(15972822-15972927)
chr8 (556-704)||(38017047-38017194)
chr8 (620-704)||(1503647-1503730)
chr8 (612-704)||(24211176-24211267)
chr8 (622-704)||(7017662-7017743)
chr8 (461-524)||(3817914-3817977)
chr8 (636-701)||(1645953-1646018)
chr8 (636-701)||(8453846-8453911)
chr8 (636-701)||(14128876-14128941)
chr8 (636-701)||(26042104-26042169)
chr8 (636-701)||(32064757-32064822)
chr8 (636-701)||(32393870-32393935)
chr8 (636-701)||(34665394-34665459)
chr8 (636-701)||(35353053-35353118)
chr8 (636-701)||(37986043-37986108)
chr8 (636-701)||(42755030-42755095)
chr8 (636-701)||(6108221-6108286)
chr8 (636-701)||(7021990-7022055)
chr8 (636-701)||(17841838-17841903)
chr8 (636-701)||(20091789-20091854)
chr8 (636-701)||(24844847-24844911)
chr8 (636-701)||(31347770-31347835)
chr8 (636-701)||(40780117-40780182)
chr8 (637-701)||(38016983-38017047)
chr8 (471-514)||(38016999-38017042)
chr8 (636-685)||(3817918-3817967)
chr8 (636-701)||(15187572-15187637)
chr8 (636-685)||(15972865-15972914)
chr8 (636-701)||(24211541-24211606)
chr8 (636-701)||(27782105-27782170)
chr8 (471-516)||(37132650-37132695)
chr8 (703-744)||(38125618-38125659)
chr8 (636-701)||(39772789-39772854)
chr8 (636-701)||(41819766-41819831)
chr8 (641-689)||(37132651-37132699)
chr8 (662-701)||(1886633-1886672)
chr8 (471-522)||(3890437-3890488)
chr8 (475-522)||(35353233-35353280)
chr8 (470-520)||(41819589-41819639)
chr8 (475-520)||(1503669-1503714)
chr8 (636-701)||(7017853-7017918)
chr8 (475-520)||(17841676-17841721)
chr8 (475-520)||(20091627-20091672)
chr8 (475-520)||(26041939-26041984)
chr8 (636-701)||(30835035-30835099)
chr8 (471-520)||(31347598-31347647)
chr8 (475-520)||(34665575-34665620)
chr8 (475-520)||(40779955-40780000)
chr8 (475-520)||(42754868-42754913)
[»] chr6 (43 HSPs)
chr6 (471-704)||(17705273-17705502)
chr6 (471-704)||(33696724-33696958)
chr6 (471-704)||(28675176-28675409)
chr6 (471-704)||(33695130-33695364)
chr6 (471-704)||(17175825-17176058)
chr6 (473-704)||(11548393-11548623)
chr6 (471-704)||(18365378-18365610)
chr6 (471-704)||(18370642-18370874)
chr6 (486-704)||(2309227-2309445)
chr6 (477-704)||(32702239-32702466)
chr6 (471-643)||(9752110-9752282)
chr6 (471-704)||(23290885-23291121)
chr6 (472-702)||(6031546-6031777)
chr6 (475-601)||(25986962-25987088)
chr6 (471-670)||(6127303-6127505)
chr6 (471-674)||(8515560-8515762)
chr6 (612-704)||(29693615-29693707)
chr6 (554-685)||(18889466-18889597)
chr6 (636-701)||(17705453-17705518)
chr6 (636-701)||(6127287-6127352)
chr6 (636-701)||(23291072-23291137)
chr6 (636-701)||(17176009-17176074)
chr6 (636-701)||(33695315-33695380)
chr6 (636-701)||(33696708-33696773)
chr6 (634-704)||(582531-582602)
chr6 (547-601)||(29693542-29693596)
chr6 (646-704)||(34238891-34238948)
chr6 (636-701)||(6031729-6031794)
chr6 (636-701)||(11548576-11548641)
chr6 (636-701)||(28675160-28675225)
chr6 (471-522)||(18889683-18889734)
chr6 (636-701)||(18365561-18365626)
chr6 (636-701)||(18370825-18370890)
chr6 (646-701)||(8515723-8515778)
chr6 (462-509)||(29693469-29693516)
chr6 (636-686)||(9752233-9752283)
chr6 (475-520)||(2309249-2309294)
chr6 (471-520)||(11548411-11548460)
chr6 (475-520)||(17175847-17175892)
chr6 (636-701)||(18889685-18889749)
chr6 (636-701)||(25986942-25987007)
chr6 (471-520)||(29693639-29693688)
chr6 (636-701)||(32702217-32702282)
[»] chr5 (48 HSPs)
chr5 (471-704)||(6043316-6043548)
chr5 (473-704)||(3521811-3522041)
chr5 (471-704)||(3362806-3363040)
chr5 (473-704)||(4892232-4892463)
chr5 (473-704)||(33584133-33584364)
chr5 (473-704)||(22912861-22913089)
chr5 (473-704)||(25398268-25398499)
chr5 (471-704)||(8145403-8145634)
chr5 (471-704)||(14138696-14138928)
chr5 (471-704)||(2477664-2477897)
chr5 (471-704)||(37321597-37321830)
chr5 (471-704)||(38899529-38899763)
chr5 (471-704)||(12850829-12851063)
chr5 (473-704)||(17545486-17545720)
chr5 (475-671)||(4433844-4434040)
chr5 (458-685)||(31640763-31640990)
chr5 (471-692)||(11360947-11361168)
chr5 (471-704)||(12614541-12614770)
chr5 (471-696)||(27481854-27482077)
chr5 (636-701)||(2477648-2477713)
chr5 (636-701)||(11361119-11361184)
chr5 (636-701)||(4892214-4892279)
chr5 (636-701)||(8145387-8145452)
chr5 (703-760)||(8564912-8564969)
chr5 (636-701)||(12614721-12614786)
chr5 (636-701)||(22913042-22913107)
chr5 (636-701)||(25398250-25398315)
chr5 (636-701)||(6043499-6043564)
chr5 (636-701)||(33584317-33584382)
chr5 (636-696)||(37321781-37321841)
chr5 (620-670)||(13664737-13664787)
chr5 (636-701)||(3362790-3362855)
chr5 (636-701)||(14138680-14138745)
chr5 (471-520)||(22912879-22912928)
chr5 (536-601)||(36880230-36880295)
chr5 (636-701)||(38899714-38899779)
chr5 (645-701)||(10458409-10458465)
chr5 (471-511)||(10458425-10458465)
chr5 (482-520)||(13664753-13664791)
chr5 (470-508)||(31640762-31640800)
chr5 (612-670)||(36880150-36880213)
chr5 (636-701)||(4433995-4434060)
chr5 (475-520)||(4892396-4892441)
chr5 (636-701)||(12850813-12850878)
chr5 (636-701)||(17545673-17545738)
chr5 (659-696)||(27481843-27481880)
chr5 (475-520)||(33584155-33584200)
chr5 (702-743)||(34547730-34547771)
[»] scaffold0228 (7 HSPs)
scaffold0228 (471-704)||(25964-26197)
scaffold0228 (471-704)||(16012-16245)
scaffold0228 (471-601)||(8430-8560)
scaffold0228 (636-701)||(8414-8479)
scaffold0228 (636-701)||(15996-16061)
scaffold0228 (636-701)||(25948-26013)
scaffold0228 (475-520)||(26130-26175)
[»] scaffold0085 (2 HSPs)
scaffold0085 (471-704)||(47878-48110)
scaffold0085 (636-700)||(47863-47927)
[»] scaffold0471 (2 HSPs)
scaffold0471 (473-704)||(12872-13103)
scaffold0471 (636-701)||(12854-12919)
[»] chr3 (67 HSPs)
chr3 (471-704)||(22426149-22426381)
chr3 (471-711)||(33839559-33839804)
chr3 (473-704)||(3137218-3137449)
chr3 (471-704)||(3456092-3456325)
chr3 (475-704)||(33113825-33114055)
chr3 (486-704)||(33145755-33145973)
chr3 (458-698)||(41883031-41883273)
chr3 (475-704)||(36864836-36865060)
chr3 (471-704)||(6041912-6042138)
chr3 (473-704)||(8361843-8362080)
chr3 (471-704)||(3574330-3574564)
chr3 (471-704)||(19650704-19650937)
chr3 (471-704)||(37216857-37217090)
chr3 (471-704)||(47738133-47738373)
chr3 (473-704)||(9796833-9797064)
chr3 (486-704)||(3089460-3089680)
chr3 (471-704)||(2754745-2754980)
chr3 (473-704)||(37522083-37522314)
chr3 (500-670)||(42297921-42298090)
chr3 (471-704)||(48160933-48161167)
chr3 (471-704)||(24343575-24343811)
chr3 (471-704)||(8320386-8320621)
chr3 (471-601)||(30385039-30385169)
chr3 (517-704)||(40327899-40328093)
chr3 (473-704)||(41224263-41224495)
chr3 (473-594)||(34482824-34482945)
chr3 (471-601)||(42297381-42297512)
chr3 (471-601)||(11347296-11347426)
chr3 (612-704)||(42921295-42921387)
chr3 (568-701)||(30385526-30385658)
chr3 (612-704)||(26612916-26613008)
chr3 (612-704)||(34482692-34482783)
chr3 (461-704)||(46918920-46919156)
chr3 (636-701)||(3574515-3574580)
chr3 (636-701)||(6041896-6041961)
chr3 (636-701)||(42297365-42297431)
chr3 (636-701)||(2754729-2754794)
chr3 (636-701)||(3456076-3456141)
chr3 (636-701)||(11347280-11347345)
chr3 (636-701)||(37217041-37217106)
chr3 (636-701)||(37522065-37522130)
chr3 (636-701)||(48160917-48160982)
chr3 (636-701)||(3137402-3137467)
chr3 (636-701)||(8320572-8320637)
chr3 (636-701)||(9797017-9797082)
chr3 (636-701)||(19650888-19650953)
chr3 (636-701)||(22426332-22426397)
chr3 (636-701)||(33839543-33839608)
chr3 (657-701)||(42921155-42921199)
chr3 (471-566)||(42921171-42921266)
chr3 (636-701)||(33113805-33113870)
chr3 (636-701)||(33145725-33145789)
chr3 (471-520)||(41224428-41224477)
chr3 (636-700)||(30385024-30385088)
chr3 (636-683)||(8362033-8362080)
chr3 (475-520)||(3137240-3137285)
chr3 (471-520)||(8361861-8361910)
chr3 (471-520)||(33839729-33839778)
chr3 (475-520)||(34482714-34482759)
chr3 (636-701)||(34482898-34482963)
chr3 (475-520)||(37216879-37216924)
chr3 (471-520)||(40328025-40328074)
chr3 (636-685)||(41883211-41883260)
chr3 (703-760)||(42380740-42380797)
chr3 (703-760)||(42409454-42409511)
chr3 (636-701)||(47738117-47738182)
chr3 (471-520)||(47738305-47738354)
[»] scaffold0204 (2 HSPs)
scaffold0204 (473-704)||(4426-4657)
scaffold0204 (636-701)||(4408-4473)
[»] scaffold0178 (2 HSPs)
scaffold0178 (471-704)||(11649-11882)
scaffold0178 (636-701)||(11633-11698)
[»] scaffold0096 (2 HSPs)
scaffold0096 (471-704)||(41039-41271)
scaffold0096 (636-701)||(41023-41088)
[»] scaffold0041 (1 HSPs)
scaffold0041 (471-587)||(85454-85570)
[»] scaffold0665 (2 HSPs)
scaffold0665 (471-601)||(3096-3221)
scaffold0665 (636-701)||(3080-3145)
[»] scaffold0001 (1 HSPs)
scaffold0001 (704-743)||(504626-504665)
[»] scaffold0009 (1 HSPs)
scaffold0009 (703-760)||(143351-143408)
[»] scaffold0064 (1 HSPs)
scaffold0064 (703-744)||(59434-59475)


Alignment Details
Target: chr2 (Bit Score: 479; Significance: 0; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 479; E-Value: 0
Query Start/End: Original strand, 1 - 559
Target Start/End: Original strand, 37335271 - 37335829
Alignment:
Q  1 agtgttttaatattgatataaagaccttttaaagccagtggctcaagtgcattggaaaatctctggggttcattcattgtgttggcgagttcttggtaca 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  37335271 agtgttttaatattgatataaagaccttttaaagccagtggctcaagtgcattggaaaatctctggggtccattcattgtgttggcgagttcttggtaca 37335370  T
Q  101 tgattagcaattggctggggatatctacgttacttcaaaatgaaggtctatcccacttagatctatttgaagtgctgatgggtagtgggagagtcttcct 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||    
T  37335371 tgattagcaattggctggggatatctacgttacttcaaaatgaaggtctatcccacttagatctatttgaagggctgataggtagtgggagagtcttcct 37335470  T
Q  201 aatagacgacatagtgtgatatggttcgtcggcatttgaaacatttggaaggcaaggaacatcaaactattcaataacagggaagttcacctgaaaaata 300  Q
    |||||| ||||||||||||||||||| ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  37335471 aatagaagacatagtgtgatatggtttgtcggcatttggaacatttggaaggcaaggaacaacaaactattcaataacagggaagttcacctgaaaaata 37335570  T
Q  301 tcaccgaatcggtaaaatgactttcttgaaattggttaagattcaagacaaatagcatgtattacaatgttattgggagaagattttatgtttttgctcg 400  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  37335571 tcaccgaatcggtaaaatgactttcttgaaattggttaagattcaagacaaatagcatgtattacaatgttattgggagaagattttctgtttttactcg 37335670  T
Q  401 atgaagcataaattgctggtttggtaatatgataagtgagtgttggtaataggttaggagcaatgatatatatcaagaaaaattcaagaatgacatggta 500  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||||||||||| |    
T  37335671 atgaagcataaattgctggtttggtaatatgataagtgagtgttggtaataggttaggagcaatgctatatattaagaaagattcaagaatgacatggca 37335770  T
Q  501 gaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaa 559  Q
    ||||||||||  ||| ||| |||||| ||||| |||||||||||||||||| |||||||    
T  37335771 gaataatcacttttagattgtatcaaaaaattgttctgatattaatgttagccaataaa 37335829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 130; E-Value: 7e-67
Query Start/End: Original strand, 471 - 704
Target Start/End: Complemental strand, 9293613 - 9293379
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctg 570  Q
    ||||||||||  |||||||||||||||| |||||||||||||||| |||||||||||||||| | |||| ||||||||||| |||||||||||||| |||    
T  9293613 tatcaagaaattttcaagaatgacatggcagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttagccaataaaatctcagcctg 9293514  T
Q  571 gctggaaatcatggggtggtgggtgttatg--tgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattc 668  Q
    || |||||||||||||||||||||||||||  |          ||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  9293513 gccggaaatcatggggtggtgggtgttatgtatttttttttttatgaaagattaataaatgagactgaaatctaagggtgattattgtgtcatgtcattc 9293414  T
Q  669 ttaaatttttcttgataaaatcattcttgatatcta 704  Q
    || ||| |||||| ||||||||||||||||||||||    
T  9293413 ttgaatctttctt-ataaaatcattcttgatatcta 9293379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 130; E-Value: 7e-67
Query Start/End: Original strand, 473 - 704
Target Start/End: Complemental strand, 23268097 - 23267866
Alignment:
Q  473 tcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctggc 572  Q
    ||||||||| |||||||||||||||| |||||||||||||||| |||||||||||||||  | |||| ||||||||||  ||||||||||||||||||||    
T  23268097 tcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagtctggc 23267998  T
Q  573 tggaaatcatggggtggtgggtgttatgt-gnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattctta 671  Q
     ||||||||||||||||||||||||||||           ||||||| |||||||||||||||||||||||| |||||||| |||| |||||||||||||    
T  23267997 cggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattctta 23267898  T
Q  672 aatttttcttgataaaatcattcttgatatcta 704  Q
    |||||||||| ||||||||||||||||||||||    
T  23267897 aatttttctt-ataaaatcattcttgatatcta 23267866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 125; E-Value: 7e-64
Query Start/End: Original strand, 458 - 704
Target Start/End: Original strand, 3989091 - 3989337
Alignment:
Q  458 gagcaatgatatatatcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaata 557  Q
    |||||||| ||||||||||||||| || ||||||||||||| |||||||||||||||| |||||||||||||||  |  ||| ||||||||||| |||||    
T  3989091 gagcaatgctatatatcaagaaaattttaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcttgaaattaatgttagccaata 3989190  T
Q  558 aaatctcagtctggctggaaatcatggggtggtgggtgttatgt-gnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgt 656  Q
    ||||||||||||||| ||||||||||||||||||||||||||||           ||||||| |||||||||||||||||||||||| ||| |||| |||    
T  3989191 aaatctcagtctggccggaaatcatggggtggtgggtgttatgtattttttttttatgaaagattaataaatgagactgaaatctaaaggttattattgt 3989290  T
Q  657 gtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 704  Q
    ||||||||||||||  || |||||| ||||||||||||||||||||||    
T  3989291 gtcatgtcattcttggatctttctt-ataaaatcattcttgatatcta 3989337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 119; E-Value: 3e-60
Query Start/End: Original strand, 475 - 704
Target Start/End: Complemental strand, 31174867 - 31174639
Alignment:
Q  475 aagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctggctg 574  Q
    ||||||| |||||||||||||||| |||||||||||||||| |||||||||||||||  | |||| ||||||||||| |||||||||||||||||| | |    
T  31174867 aagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttagccaataaaatctcagtctgaccg 31174768  T
Q  575 gaaatcatggggtggtgggtgttatgtgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaat 674  Q
    |||||||||||||||||||||||||||          ||||||| ||||||||||||| |||||||||| || | ||| ||||||||||||||||| |||    
T  31174767 gaaatcatggggtggtgggtgttatgtatttttttttatgaaagattaataaatgagattgaaatctaaaggagtttattgtgtcatgtcattcttgaat 31174668  T
Q  675 ttttcttgataaaatcattcttgatatcta 704  Q
     |||||| ||||||||||||||||||||||    
T  31174667 ctttctt-ataaaatcattcttgatatcta 31174639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 118; E-Value: 1e-59
Query Start/End: Original strand, 473 - 704
Target Start/End: Complemental strand, 7475543 - 7475312
Alignment:
Q  473 tcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctggc 572  Q
    ||||||||| ||||||||||||||| ||||||||||||||||| |||||||||||||||  | |||| ||||||||||  |||||||||||||| |||||    
T  7475543 tcaagaaaatttcaagaatgacatgatagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctggc 7475444  T
Q  573 tggaaatcatggggtggtgggtgttatgt-gnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattctta 671  Q
     ||||||||||||||||||||||||||||           ||||||| |||||||||||||||||||||||| |||||||| | |||||| ||||||||     
T  7475443 cggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattatgtcatatcattcttg 7475344  T
Q  672 aatttttcttgataaaatcattcttgatatcta 704  Q
    |||||||||| ||||||||||||||||||||||    
T  7475343 aatttttctt-ataaaatcattcttgatatcta 7475312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 118; E-Value: 1e-59
Query Start/End: Original strand, 471 - 704
Target Start/End: Original strand, 10661915 - 10662149
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctg 570  Q
    ||||||||||| || ||||||||||||| |||||||||||||||| |||||||||||||||  | |||| ||||||||||  |||||||||||||| |||    
T  10661915 tatcaagaaaattttaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctg 10662014  T
Q  571 gctggaaatcatggggtggtgggtgttatg--tgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattc 668  Q
    || ||||||||| |||||||||||||||||  |          ||||||| |||||||||||||||||||||||| |||||||| |||||||||||||||    
T  10662015 gccggaaatcatagggtggtgggtgttatgtatctttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattc 10662114  T
Q  669 ttaaatttttcttgataaaatcattcttgatatcta 704  Q
    || |||||||||| ||||||||||||||||||||||    
T  10662115 ttgaatttttctt-ataaaatcattcttgatatcta 10662149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 471 - 704
Target Start/End: Original strand, 35160785 - 35161020
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctg 570  Q
    ||||||||||| || ||||||||||||| |||||||||||||||| |||||||||||||||  | |||| ||||||||||  |||||||||||||| |||    
T  35160785 tatcaagaaaattttaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctg 35160884  T
Q  571 gctggaaatcatggggtggtgggtgttatgt---gnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcatt 667  Q
    || ||||||||||||||||||||||||||||             ||||||| |||||||||||||||||||||||| |||||||| |||| |||||||||    
T  35160885 gccggaaatcatggggtggtgggtgttatgtatcttttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcatt 35160984  T
Q  668 cttaaatttttcttgataaaatcattcttgatatcta 704  Q
    ||| |||||||||| ||||||||||||||||||||||    
T  35160985 cttgaatttttctt-ataaaatcattcttgatatcta 35161020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 114; E-Value: 3e-57
Query Start/End: Original strand, 473 - 704
Target Start/End: Original strand, 33380237 - 33380468
Alignment:
Q  473 tcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctggc 572  Q
    ||||||||| || |||||||||||||  ||||||||||||||| |||||||||||||||  | |||| ||||||||||  |||||||||||||| |||||    
T  33380237 tcaagaaaattttaagaatgacatggctgaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctggc 33380336  T
Q  573 tggaaatcatggggtggtgggtgttatgt-gnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattctta 671  Q
     ||||||||||||||||||||||||||||           ||||||| |||||||||||||||||||||||| |||||||| |||| ||||||||||||     
T  33380337 cggaaatcatggggtggtgggtgttatgtatctttttttaatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttg 33380436  T
Q  672 aatttttcttgataaaatcattcttgatatcta 704  Q
    |||||||||| ||||||||||||||||||||||    
T  33380437 aatttttctt-ataaaatcattcttgatatcta 33380468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 110; E-Value: 6e-55
Query Start/End: Original strand, 810 - 927
Target Start/End: Original strand, 37335893 - 37336010
Alignment:
Q  810 atgctttcaattgcattagcatagtccttgtgttttgtctcttacgtaagcaagcataattagtggaggactgtgtcgagaattgcacatatcagaatga 909  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37335893 atgctttgaattgcattagcatagtcctcgtgttttgtctcttacgtaagcaagcataattagtggaggactgtgtcgagaattgcacatatcagaatga 37335992  T
Q  910 attcatgagcagcatctt 927  Q
    ||||||||||||||||||    
T  37335993 attcatgagcagcatctt 37336010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 473 - 704
Target Start/End: Complemental strand, 21393723 - 21393490
Alignment:
Q  473 tcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctggc 572  Q
    |||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| | |||| ||||||||||  |||||||||||  ||| |||    
T  21393723 tcaagaaaaatttaagaatgacatggtagaataatcacccttagattttatcaagaaattgtactgaaattaatgttaaccaataaaatctatgtcgggc 21393624  T
Q  573 tggaaatcatggggtggtgggtgttatg------tgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcat 666  Q
     |||||||||||||||||||||||||||      |          ||||||||  |||||||||||||||||| |||||||||||| |||||||||||||    
T  21393623 cggaaatcatggggtggtgggtgttatgtattttttattttttttatgaaagg--aataaatgagactgaaatttaagggtgattattgtgtcatgtcat 21393526  T
Q  667 tcttaaatttttcttgataaaatcattcttgatatcta 704  Q
    |||| || |||||||||| |||||||||||||||||||    
T  21393525 tcttgaa-ttttcttgat-aaatcattcttgatatcta 21393490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 473 - 704
Target Start/End: Original strand, 43330942 - 43331173
Alignment:
Q  473 tcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctggc 572  Q
    |||| ||||||||||||||||||||| |||||||||||||||| |||||||||||||||| | |||| ||||||||||| ||||||||| || ||| |||    
T  43330942 tcaaaaaaaattcaagaatgacatggcagaataatcacccttagattttatcaagaaattgtactgaaattaatgttagccaataaaatttctgtcgggc 43331041  T
Q  573 tggaaatcatggggtggtgggtgttatg---tgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattct 669  Q
     |||||||||||||||||||||||||||   |          |||| |||  |||||||||||||||||||||| |||||||| |||  |||||||||||    
T  43331042 cggaaatcatggggtggtgggtgttatgtattttttttttttatgagagg--aataaatgagactgaaatctaaaggtgattattgtaccatgtcattct 43331139  T
Q  670 taaatttttcttgataaaatcattcttgatatcta 704  Q
    | ||| ||||||||| |||||||||||||||||||    
T  43331140 tgaatctttcttgat-aaatcattcttgatatcta 43331173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 98; E-Value: 9e-48
Query Start/End: Original strand, 475 - 704
Target Start/End: Original strand, 9723437 - 9723668
Alignment:
Q  475 aagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctggctg 574  Q
    |||||| ||| ||||||||||||  |||||||||||||||| |||||||||||||||| | | || |||||||||||  ||||||||||||| ||  | |    
T  9723437 aagaaagatttaagaatgacatgacagaataatcacccttaaattttatcaagaaattgtcccgaaattaatgttagctaataaaatctcagcctcaccg 9723536  T
Q  575 gaaatcatggggtggtgggtgttatg--tgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaa 672  Q
    ||||||||||||||||||||||||||  |          |||||| || ||||||| |||||||||||||| |||||||| | |||||||||||||||||    
T  9723537 gaaatcatggggtggtgggtgttatgtatttttttttttatgaaaagtgaataaataagactgaaatctaaaggtgattattctgtcatgtcattcttaa 9723636  T
Q  673 atttttcttgataaaatcattcttgatatcta 704  Q
    || ||||||||| |||||||||||||||||||    
T  9723637 atatttcttgatcaaatcattcttgatatcta 9723668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 471 - 704
Target Start/End: Original strand, 13354874 - 13355109
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctc-agtct 569  Q
    ||||||||||| ||||||||||| |||| |||||||| ||||||| |||||||||||||||  |  ||| ||||||||||| |||||||||||| || ||    
T  13354874 tatcaagaaaatttcaagaatgatatggcagaataattacccttagattttatcaagaaatagtcttgaaattaatgttagccaataaaatctctagcct 13354973  T
Q  570 ggctggaaatcatggggtggtgggtgttatg--tgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcatt 667  Q
    ||| ||||||||||| |||||||||||||||  |          ||||||| ||||||||||||||||||||||||  ||||||| |||| |||||||||    
T  13354974 ggccggaaatcatggagtggtgggtgttatgtatttttttttttatgaaagattaataaatgagactgaaatctaaaagtgattattgtgccatgtcatt 13355073  T
Q  668 cttaaatttttcttgataaaatcattcttgatatcta 704  Q
    |||  || |||||| ||||||||||||||||||||||    
T  13355074 cttggatctttctt-ataaaatcattcttgatatcta 13355109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 471 - 670
Target Start/End: Original strand, 21936109 - 21936310
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctc-agtct 569  Q
    ||||||||||| ||||||||||| |||| |||||||||||||||| |||||||||||||||  |  ||| ||||||||||| |||||||||||| || ||    
T  21936109 tatcaagaaaatttcaagaatgatatggcagaataatcacccttagattttatcaagaaatagtcttgaaattaatgttagccaataaaatctctagcct 21936208  T
Q  570 ggctggaaatcatggggtggtgggtgttatgt-gnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattc 668  Q
    ||| ||||||||||||||||||||||||||||           ||||||| ||||||||||| |||||||||||| |||||||| |||| ||||||||||    
T  21936209 ggccggaaatcatggggtggtgggtgttatgtattttttttttatgaaagattaataaatgaaactgaaatctaaaggtgattattgtgccatgtcattc 21936308  T
Q  669 tt 670  Q
    ||    
T  21936309 tt 21936310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 497 - 684
Target Start/End: Complemental strand, 16767483 - 16767285
Alignment:
Q  497 ggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctggctggaaatcatggggtggtgggtgt 596  Q
    |||||||||||||| |||| |||||||||||||||||| |||| ||||||||||| |||||||||||||||||||| ||||||||| |||||||||||||    
T  16767483 ggtagaataatcactcttaaattttatcaagaaattatcctgaaattaatgttagccaataaaatctcagtctggccggaaatcatagggtggtgggtgt 16767384  T
Q  597 tatg-----------tgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgat 684  Q
    ||||           |          ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||| |||||||||    
T  16767383 tatgtatttttattttattttattttatgaaaggttaataaatgagactgaaatctaagagtgattattgtgtcatgtcattcttgaatctttcttgat 16767285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 475 - 670
Target Start/End: Complemental strand, 14941399 - 14941201
Alignment:
Q  475 aagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctggctg 574  Q
    |||||| ||||||||||||||||| |||||||||||||||| |||||||||||||||| | |||| ||||||||||| |||| ||||||||| |||||      
T  14941399 aagaaagattcaagaatgacatggcagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttagccaat-aaatctcagcctggcca 14941301  T
Q  575 gaaatcatggggtggtgggtgttatg----tgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattctt 670  Q
    ||||||||| ||||||||||||||||    |          ||||||||||||||||| ||| |||||||||||| |||||| |||||||||||||||||    
T  14941300 gaaatcatgaggtggtgggtgttatgtattttttttattttatgaaaggttaataaataagattgaaatctaaggatgattattgtgtcatgtcattctt 14941201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 475 - 601
Target Start/End: Original strand, 27847664 - 27847790
Alignment:
Q  475 aagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctggctg 574  Q
    |||||| ||||||||||||||||  |||||||||||| ||| |||||||||| ||||| | |||| |||||||||||||||||||||||||| ||| |      
T  27847664 aagaaagattcaagaatgacatgacagaataatcaccgttagattttatcaaaaaattgtcctgaaattaatgttagtcaataaaatctcagcctgacca 27847763  T
Q  575 gaaatcatggggtggtgggtgttatgt 601  Q
    |||||||||||||||||||||||||||    
T  27847764 gaaatcatggggtggtgggtgttatgt 27847790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 478 - 600
Target Start/End: Original strand, 22591517 - 22591639
Alignment:
Q  478 aaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctggctggaa 577  Q
    |||||||||||||||| |||| ||||||||| |||||| ||||||| |||||||| | |||| ||||||||||| |||||||||||||| || || ||||    
T  22591517 aaaaattcaagaatgatatggcagaataatcccccttaaattttattaagaaattgtcctgaaattaatgttagccaataaaatctcagcctagcaggaa 22591616  T
Q  578 atcatggggtggtgggtgttatg 600  Q
    ||||||||||||||||| |||||    
T  22591617 atcatggggtggtgggtattatg 22591639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 612 - 704
Target Start/End: Original strand, 22592880 - 22592974
Alignment:
Q  612 atgaaaggttaataaatgagactgaaa--tctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 704  Q
    ||||||||||||||||| |||||||||  |||||||||||||| ||||||||||||||||| ||| |||||||||||||||||||||||||||||    
T  22592880 atgaaaggttaataaataagactgaaaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgatatcta 22592974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 622 - 692
Target Start/End: Original strand, 37335824 - 37335894
Alignment:
Q  622 aataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcat 692  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  37335824 aataaatgagactgaaatctaagggtgattactgtgtcatgtcattattaaatctttcttgataaaatcat 37335894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 636 - 701
Target Start/End: Complemental strand, 10661964 - 10661899
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    ||||||||||||||||| | || ||||||||||||||| |||||||||||||||| ||||||||||    
T  10661964 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatat 10661899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 636 - 701
Target Start/End: Complemental strand, 35160834 - 35160769
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    ||||||||||||||||| | || ||||||||||||||| |||||||||||||||| ||||||||||    
T  35160834 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatat 35160769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 622 - 670
Target Start/End: Complemental strand, 34321042 - 34320994
Alignment:
Q  622 aataaatgagactgaaatctaagggtgattactgtgtcatgtcattctt 670  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  34321042 aataaatgagactgaaatctaagggtgattattgtgccatgtcattctt 34320994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 517 - 601
Target Start/End: Complemental strand, 40262727 - 40262643
Alignment:
Q  517 attttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctggctggaaatcatggggtggtgggtgttatgt 601  Q
    |||||||||||||||| | | || |||||| |||| |||||||||||||  ||| | |||||| |||||||||||||||||||||    
T  40262727 attttatcaagaaattgtcccgaaattaatattagccaataaaatctcaccctgaccggaaattatggggtggtgggtgttatgt 40262643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 636 - 701
Target Start/End: Original strand, 7475496 - 7475561
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    ||||||||||||||||| | | ||||||||||||| || ||||||||| |||||| ||||||||||    
T  7475496 aaatctaagggtgattattctatcatgtcattcttgaaattttcttgaaaaaatctttcttgatat 7475561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 636 - 701
Target Start/End: Original strand, 9293564 - 9293629
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    ||||||||||||||||| | || |||||||||||| ||  ||||||||||||||| ||||||||||    
T  9293564 aaatctaagggtgattattctgccatgtcattcttgaaaatttcttgataaaatctttcttgatat 9293629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 636 - 701
Target Start/End: Complemental strand, 9723482 - 9723417
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    |||| |||||||||||| | ||||||||||||||||||| |||||| |||||||| ||||| ||||    
T  9723482 aaatttaagggtgattattctgtcatgtcattcttaaatctttcttaataaaatctttcttaatat 9723417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 636 - 701
Target Start/End: Original strand, 14941354 - 14941419
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    ||||||||||||||||| | || |||||||||||| ||| |||||| |||||||| ||||||||||    
T  14941354 aaatctaagggtgattattctgccatgtcattcttgaatctttcttaataaaatctttcttgatat 14941419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 636 - 701
Target Start/End: Original strand, 21393676 - 21393741
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    ||||||||||||||||| | |  ||||||||||||||||||||||||| |||||  ||||||||||    
T  21393676 aaatctaagggtgattattctaccatgtcattcttaaatttttcttgagaaaatttttcttgatat 21393741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 636 - 701
Target Start/End: Complemental strand, 21936158 - 21936093
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    ||||||||||||||||| | || ||| |||||||| || |||||||||||||||| ||||||||||    
T  21936158 aaatctaagggtgattattctgccatatcattcttgaaattttcttgataaaatctttcttgatat 21936093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 636 - 701
Target Start/End: Original strand, 23268050 - 23268115
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    ||||||||||||||||| | || |||||||||||| || ||||||||| |||||| ||||||||||    
T  23268050 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatat 23268115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 636 - 701
Target Start/End: Original strand, 31174822 - 31174887
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    ||||||||||||||||| | || |||||||||||| || ||||||| |||||||| ||||||||||    
T  31174822 aaatctaagggtgattattctgccatgtcattcttgaaattttcttaataaaatctttcttgatat 31174887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 636 - 701
Target Start/End: Complemental strand, 33380284 - 33380219
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    ||||||||||||||||| |  | ||||||||||||||| ||||||||| |||||| ||||||||||    
T  33380284 aaatctaagggtgattattcagccatgtcattcttaaaattttcttgaaaaaatctttcttgatat 33380219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 636 - 701
Target Start/End: Complemental strand, 43330989 - 43330924
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    ||||||||||||||||| | || |||||||||||| ||||||| |||| |||||| ||||||||||    
T  43330989 aaatctaagggtgattattctgccatgtcattcttgaattttttttgagaaaatctttcttgatat 43330924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 703 - 749
Target Start/End: Complemental strand, 9154210 - 9154164
Alignment:
Q  703 tactccctctgtccctatatgtaagcacctttttattagaggaaaag 749  Q
    ||||||||| |||||||||| |||||||| |||||||||||||||||    
T  9154210 tactccctccgtccctatatctaagcacccttttattagaggaaaag 9154164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 636 - 685
Target Start/End: Complemental strand, 3989153 - 3989104
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgata 685  Q
    ||||||||||||||||| | || ||||||||||||||| |||||||||||    
T  3989153 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgata 3989104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 703 - 760
Target Start/End: Original strand, 12457018 - 12457075
Alignment:
Q  703 tactccctctgtccctatatgtaagcacctttttattagaggaaaagattgcttacat 760  Q
    ||||||||| |||||||||| |||||||| |||||||||||| ||||  |||||||||    
T  12457018 tactccctccgtccctatatctaagcacccttttattagaggcaaagggtgcttacat 12457075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 636 - 701
Target Start/End: Complemental strand, 13354923 - 13354858
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    |||||||||||| |||| | || ||| |||||||| || |||||||||||||||| ||||||||||    
T  13354923 aaatctaagggtaattattctgccatatcattcttgaaattttcttgataaaatctttcttgatat 13354858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 636 - 701
Target Start/End: Complemental strand, 27847709 - 27847644
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    |||||||| |||||||| | ||||||||||||||| ||| |||||| |||||||| ||||| ||||    
T  27847709 aaatctaacggtgattattctgtcatgtcattcttgaatctttcttaataaaatctttctttatat 27847644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 703 - 748
Target Start/End: Original strand, 33810617 - 33810662
Alignment:
Q  703 tactccctctgtccctatatgtaagcacctttttattagaggaaaa 748  Q
    ||||||||  ||||||||||||||||||| ||||||||||||||||    
T  33810617 tactcccttcgtccctatatgtaagcacccttttattagaggaaaa 33810662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 703 - 760
Target Start/End: Complemental strand, 36887396 - 36887339
Alignment:
Q  703 tactccctctgtccctatatgtaagcacctttttattagaggaaaagattgcttacat 760  Q
    ||||||||| |||||||||||||| |||| |||||||| ||||||| | |||||||||    
T  36887396 tactccctccgtccctatatgtaaacaccattttattataggaaaaaaatgcttacat 36887339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 703 - 760
Target Start/End: Original strand, 41877555 - 41877612
Alignment:
Q  703 tactccctctgtccctatatgtaagcacctttttattagaggaaaagattgcttacat 760  Q
    |||||||| ||||||||||| |||||||  |||||||||| ||||||| |||||||||    
T  41877555 tactccctttgtccctatatctaagcacacttttattagaagaaaagagtgcttacat 41877612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 471 - 520
Target Start/End: Complemental strand, 43331155 - 43331106
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatattt 520  Q
    |||||||||| ||||||||||||||||||| |||||||||| ||| ||||    
T  43331155 tatcaagaaagattcaagaatgacatggtacaataatcacctttagattt 43331106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 471 - 521
Target Start/End: Complemental strand, 22592955 - 22592905
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatatttt 521  Q
    |||||||||| ||||||||||||||||  | |||||||||||||| |||||    
T  22592955 tatcaagaaagattcaagaatgacatgacacaataatcacccttagatttt 22592905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 703 - 748
Target Start/End: Original strand, 12890265 - 12890310
Alignment:
Q  703 tactccctctgtccctatatgtaagcacctttttattagaggaaaa 748  Q
    ||||||||| |||||||||| |||||| | ||||||||||||||||    
T  12890265 tactccctccgtccctatatctaagcatccttttattagaggaaaa 12890310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 475 - 520
Target Start/End: Complemental strand, 33380446 - 33380401
Alignment:
Q  475 aagaaaaattcaagaatgacatggtagaataatcacccttatattt 520  Q
    |||||||||||||||||||||||| | |||||||||| ||| ||||    
T  33380446 aagaaaaattcaagaatgacatggcacaataatcacctttagattt 33380401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 475 - 520
Target Start/End: Complemental strand, 35160998 - 35160953
Alignment:
Q  475 aagaaaaattcaagaatgacatggtagaataatcacccttatattt 520  Q
    |||||||||||||||||||||||| | |||||||||| ||| ||||    
T  35160998 aagaaaaattcaagaatgacatggcacaataatcacctttagattt 35160953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 136; Significance: 2e-70; HSPs: 64)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 136; E-Value: 2e-70
Query Start/End: Original strand, 471 - 704
Target Start/End: Complemental strand, 21802359 - 21802124
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctg 570  Q
    ||||||||||| |||||||||||||||| |||||||||||||||| |||||||||||||||| | |||| ||||||||||| ||||||||||||||||||    
T  21802359 tatcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttagccaataaaatctcagtctg 21802260  T
Q  571 gctggaaatcatggggtg---gtgggtgttatgtgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcatt 667  Q
    || |||||||||||||||   |||||||||||||          ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  21802259 gccggaaatcatggggtggtggtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaagggtgattattgtgtcatgtcatt 21802160  T
Q  668 cttaaatttttcttgataaaatcattcttgatatcta 704  Q
    ||| ||| |||||| ||||||||||||||||||||||    
T  21802159 cttgaatctttctt-ataaaatcattcttgatatcta 21802124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 129; E-Value: 3e-66
Query Start/End: Original strand, 458 - 704
Target Start/End: Original strand, 9088885 - 9089131
Alignment:
Q  458 gagcaatgatatatatcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaata 557  Q
    |||||||| ||||||||||||||| |||||||||||||||| |||||||||||||||| |||||||||||||||  | |||| ||||||||||  |||||    
T  9088885 gagcaatgctatatatcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaata 9088984  T
Q  558 aaatctcagtctggctggaaatcatggggtggtgggtgttatgt-gnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgt 656  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||           ||||||| |||||||||||||||||||||||| | |||||| |||    
T  9088985 aaatctcagcctggccggaaatcatggggtggtgggtgttatgtatcttttttgtatgaaagattaataaatgagactgaaatctaaagatgattattgt 9089084  T
Q  657 gtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 704  Q
    | |||||||||||| |||||||||| ||||||||||||||||||||||    
T  9089085 gccatgtcattcttgaatttttctt-ataaaatcattcttgatatcta 9089131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 129; E-Value: 3e-66
Query Start/End: Original strand, 458 - 704
Target Start/End: Original strand, 17655445 - 17655692
Alignment:
Q  458 gagcaatgatatatatcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaata 557  Q
    |||||||| ||||||| ||||||| |||||||||||||||| |||||||||||||||| |||||||||||||||  | |||| ||||||||||| |||||    
T  17655445 gagcaatgttatatattaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttagccaata 17655544  T
Q  558 aaatctcagtctggctggaaatcatggggtggtgggtgttatgtg-nnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgt 656  Q
    ||||||||| ||||| |||||||||||| || |||||||||| ||          |||||||||||||||||||||||||||||||| ||| |||| | |    
T  17655545 aaatctcagcctggccggaaatcatgggatgatgggtgttatatgtattttttttatgaaaggttaataaatgagactgaaatctaaaggtaattattat 17655644  T
Q  657 gtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 704  Q
    |||||||||||||||||| ||||||||||||||||||||| |||||||    
T  17655645 gtcatgtcattcttaaatctttcttgataaaatcattcttaatatcta 17655692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 122; E-Value: 4e-62
Query Start/End: Original strand, 473 - 704
Target Start/End: Original strand, 36073380 - 36073610
Alignment:
Q  473 tcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattc-tgatattaatgttagtcaataaaatctcagtctgg 571  Q
    ||||||||| |||||||||||||||| |||||||||||||||| |||||||||||||| ||||| ||| ||||||||||  |||||||||||||| |||     
T  36073380 tcaagaaaatttcaagaatgacatggcagaataatcacccttaaattttatcaagaaa-tattcatgaaattaatgttaaccaataaaatctcagcctga 36073478  T
Q  572 ctggaaatcatggggtggtgggtgttatgtgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattctta 671  Q
    | ||||||||||||||||||||||||||||          ||||||| |||||||||||||||||||||||| |||||||| |||| ||||||||||||     
T  36073479 ccggaaatcatggggtggtgggtgttatgtatctttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttg 36073578  T
Q  672 aatttttcttgataaaatcattcttgatatcta 704  Q
    |||||||||| ||||||||||||||||||||||    
T  36073579 aatttttctt-ataaaatcattcttgatatcta 36073610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 120; E-Value: 7e-61
Query Start/End: Original strand, 475 - 704
Target Start/End: Original strand, 53123063 - 53123292
Alignment:
Q  475 aagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctggctg 574  Q
    ||||||| |||||||||||||||| |||||||||||||||| |||||||||||||||  | |||| ||||||||||  |||||||||||||||||||| |    
T  53123063 aagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagtctggccg 53123162  T
Q  575 gaaatcatggggtggtgggtgttatgt-gnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaa 673  Q
    |||||||||||||||||||||||||||           ||||||| |||||||||||||||||||||||| | |||||| |||| |||||||||||| ||    
T  53123163 gaaatcatggggtggtgggtgttatgtatcttttttgtatgaaagattaataaatgagactgaaatctaaagatgattattgtgccatgtcattcttgaa 53123262  T
Q  674 tttttcttgataaaatcattcttgatatcta 704  Q
    |||||||| ||||||||||||||||||||||    
T  53123263 tttttctt-ataaaatcattcttgatatcta 53123292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 118; E-Value: 1e-59
Query Start/End: Original strand, 473 - 704
Target Start/End: Original strand, 24128269 - 24128500
Alignment:
Q  473 tcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctggc 572  Q
    ||||||||| |||||||||||||||| |||||||||| ||||| |||||||||||||||  | |||| ||||||||||  |||||||||||||| |||||    
T  24128269 tcaagaaaatttcaagaatgacatggcagaataatcatccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctggc 24128368  T
Q  573 tggaaatcatggggtggtgggtgttatgt-gnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattctta 671  Q
     ||||||||||||||||||| ||||||||           ||||||| |||||||||||||||||||||||| ||| |||| ||||||||||||||||||    
T  24128369 cggaaatcatggggtggtggatgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtaattattgtgtcatgtcattctta 24128468  T
Q  672 aatttttcttgataaaatcattcttgatatcta 704  Q
    |||||||||| ||||||||||||||||||||||    
T  24128469 aatttttctt-ataaaatcattcttgatatcta 24128500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 114; E-Value: 3e-57
Query Start/End: Original strand, 473 - 704
Target Start/End: Original strand, 44893456 - 44893687
Alignment:
Q  473 tcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctggc 572  Q
    |||| |||| |||||||||||||||| |||||||||||||||| |||||||||||||||  | |||| ||||||||||  |||||||||||||| |||||    
T  44893456 tcaaaaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctggc 44893555  T
Q  573 tggaaatcatggggtggtgggtgttatgt-gnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattctta 671  Q
     | |||||||||| |||||||||||||||           ||||||| |||||||||||||||||||||||| |||||||| |||| |||||||||||||    
T  44893556 cgaaaatcatgggatggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattctta 44893655  T
Q  672 aatttttcttgataaaatcattcttgatatcta 704  Q
    |||||||||| ||||||||||||||||||||||    
T  44893656 aatttttctt-ataaaatcattcttgatatcta 44893687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 114; E-Value: 3e-57
Query Start/End: Original strand, 473 - 704
Target Start/End: Original strand, 47290096 - 47290327
Alignment:
Q  473 tcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctggc 572  Q
    ||||||||| |||||||||||||||| |||||||||||||||| |||||||||||||||  | |||| ||||||||||  |||||||||||||| |||||    
T  47290096 tcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctggc 47290195  T
Q  573 tggaaatcatggggtggtgggtgttatgt-gnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattctta 671  Q
     ||||||||||||||||||||||||||||           |||||||  ||||||||||||||||||||||| |||||||| |||  ||||||||||||     
T  47290196 cggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagaataataaatgagactgaaatctaaaggtgattattgtaccatgtcattcttg 47290295  T
Q  672 aatttttcttgataaaatcattcttgatatcta 704  Q
    |||||||||| ||||||||||||||||||||||    
T  47290296 aatttttctt-ataaaatcattcttgatatcta 47290327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 113; E-Value: 1e-56
Query Start/End: Original strand, 458 - 704
Target Start/End: Original strand, 37219640 - 37219893
Alignment:
Q  458 gagcaatgatatatatcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaata 557  Q
    |||||||||||||||| |||||| ||| || |||||||||||| ||||||||| |||| |||||||||||||||| | |||| |||||||||||||||||    
T  37219640 gagcaatgatatatattaagaaatatttaaaaatgacatggtaaaataatcactcttaaattttatcaagaaattgtcctgaaattaatgttagtcaata 37219739  T
Q  558 aaatctcagtctggctggaaatcatggggtggtgggtgttatg-------tgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgat 650  Q
    ||||||||||||||| ||||||||| ||||| ||| |||||||       |          ||||||||||||||||| ||| |||||||||||| ||||    
T  37219740 aaatctcagtctggccggaaatcattgggtgatggatgttatgtatttttttttattttttatgaaaggttaataaataagattgaaatctaaggatgat 37219839  T
Q  651 tactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 704  Q
    || | || |||||||||||||||| |||||||||||||||||||||||||||||    
T  37219840 tattctgccatgtcattcttaaatctttcttgataaaatcattcttgatatcta 37219893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 113; E-Value: 1e-56
Query Start/End: Original strand, 478 - 704
Target Start/End: Complemental strand, 44893243 - 44893017
Alignment:
Q  478 aaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctggctggaa 577  Q
    |||| |||||||||||||||| |||||||||||||||| |||||||||||||||  | |||| ||||||||||  |||||||||||||| ||||| | ||    
T  44893243 aaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctggccgaaa 44893144  T
Q  578 atcatggggtggtgggtgttatgt-gnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaattt 676  Q
    |||||||| |||||||||||||||           ||||||| |||||||||||||||||||||||| |||||||| |||| ||||||||||||||||||    
T  44893143 atcatgggatggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaattt 44893044  T
Q  677 ttcttgataaaatcattcttgatatcta 704  Q
    ||||| ||||||||||||||||||||||    
T  44893043 ttctt-ataaaatcattcttgatatcta 44893017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 471 - 704
Target Start/End: Original strand, 2624865 - 2625098
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctg 570  Q
    ||||||||||| ||||||||||| |||| |||||||||||||||| ||||||||||||||| ||  ||| |||||||||| |||||||||||||||||||    
T  2624865 tatcaagaaaatttcaagaatgaaatggcagaataatcacccttagattttatcaagaaataatcatgaaattaatgttaatcaataaaatctcagtctg 2624964  T
Q  571 gctggaaatcatggggtggtgggtgttatgt-gnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattct 669  Q
    || ||||||||||| ||||||||||||||||           ||||||| |||||||||||||||||||||||| |||||||| ||||  |||||||| |    
T  2624965 gccggaaatcatggagtggtgggtgttatgtattttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgctatgtcatttt 2625064  T
Q  670 taaatttttcttgataaaatcattcttgatatcta 704  Q
    | ||| |||||| ||||||||||||||||||||||    
T  2625065 tgaatctttctt-ataaaatcattcttgatatcta 2625098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 475 - 704
Target Start/End: Original strand, 46441876 - 46442105
Alignment:
Q  475 aagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctggctg 574  Q
    ||||||| |||||||||||||||| | |||||||||||||| |||||||||||||||  | |||| ||||||||||  |||||||||||||  ||||| |    
T  46441876 aagaaaatttcaagaatgacatggcaaaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcaacctggccg 46441975  T
Q  575 gaaatcatggggtggtgggtgttatgt-gnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaa 673  Q
    |||||||||||||||||||||||||||           ||||||| |||||||||||||||||||||||| |||||||| |||| |||||||||||| ||    
T  46441976 gaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaa 46442075  T
Q  674 tttttcttgataaaatcattcttgatatcta 704  Q
    |||||||| ||||||||||||||||||||||    
T  46442076 tttttctt-ataaaatcattcttgatatcta 46442105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 471 - 704
Target Start/End: Complemental strand, 10442826 - 10442591
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctg 570  Q
    ||||||||||| |||||||||||||||| |||||||||||||||| |||||||||||||||  | |||| ||||||||||| |||||||||||||| |||    
T  10442826 tatcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttagccaataaaatctcagcctg 10442727  T
Q  571 gctggaaatcatggggtggtgggtgttatg--tgnnnnnnnnnatgaaaggtt-aataaatgagactgaaatctaagggtgattactgtgtcatgtcatt 667  Q
    || |||||||||||||||||||||||||||  |           |||||| || |||||||||||||||||||||| |||||||| |||| |||||||||    
T  10442726 gccggaaatcatggggtggtgggtgttatgtttttttttttttttgaaagattaaataaatgagactgaaatctaaaggtgattattgtgccatgtcatt 10442627  T
Q  668 cttaaatttttcttgataaaatcattcttgatatcta 704  Q
    ||| ||| |||||| ||||||||||||||||||||||    
T  10442626 cttgaatctttctt-ataaaatcattcttgatatcta 10442591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 110; E-Value: 6e-55
Query Start/End: Original strand, 471 - 704
Target Start/End: Original strand, 4751474 - 4751708
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctg 570  Q
    ||||||||||| | |||||||||||||| ||||||| |||||||| |||||||||||||||  | |||| ||||||||||  ||||||||||||||||||    
T  4751474 tatcaagaaaattccaagaatgacatggcagaataaccacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagtctg 4751573  T
Q  571 gctggaaatcatggggtggtgggtgttatg--tgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattc 668  Q
    |  |||||||||||||||||||||||||||  |          ||||||| |||||||||||||||||||||||| |||| ||| |||| ||||||||||    
T  4751574 gtcggaaatcatggggtggtgggtgttatgtattttcttttttatgaaagattaataaatgagactgaaatctaaaggtggttattgtgccatgtcattc 4751673  T
Q  669 ttaaatttttcttgataaaatcattcttgatatcta 704  Q
    ||||||||||||| ||||||| ||||||||||||||    
T  4751674 ttaaatttttctt-ataaaattattcttgatatcta 4751708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 110; E-Value: 6e-55
Query Start/End: Original strand, 471 - 704
Target Start/End: Complemental strand, 49387925 - 49387691
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctg 570  Q
    ||||||||||| |||||||||||||||| |||||||||||||||| |||||||||||||||  | |||| ||||||||||  |||||||||||||| ||     
T  49387925 tatcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagccta 49387826  T
Q  571 gctggaaatcatggggtggtgggtgttatg--tgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattc 668  Q
    || ||||||||||||||||||| |||||||  |          ||||||| |||||||||||||||||||||||| |||||||| |||| ||||||||||    
T  49387825 gccggaaatcatggggtggtggatgttatgtatctttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattc 49387726  T
Q  669 ttaaatttttcttgataaaatcattcttgatatcta 704  Q
    || |||||||||| |||||||||| |||||||||||    
T  49387725 ttgaatttttctt-ataaaatcatccttgatatcta 49387691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 108; E-Value: 1e-53
Query Start/End: Original strand, 471 - 704
Target Start/End: Complemental strand, 7745149 - 7744916
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctg 570  Q
    ||||||||||| || ||||||||||||| |||||||||||||||| |||||||||||||||  | |||| ||||||||||| |||||||||||||| |||    
T  7745149 tatcaagaaaattttaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttagccaataaaatctcagcctg 7745050  T
Q  571 gctggaaatcatggggtggtgggtgttatgt-gnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattct 669  Q
    || ||||||||||||||||||||||||||||           ||||||  ||||||||||||| |||||||||| |||||||| ||||  ||||||||||    
T  7745049 gccggaaatcatggggtggtgggtgttatgtattttttttttatgaaatattaataaatgagattgaaatctaaaggtgattattgtgcaatgtcattct 7744950  T
Q  670 taaatttttcttgataaaatcattcttgatatcta 704  Q
    | ||| |||||| ||||||||||||||||||||||    
T  7744949 tgaatctttctt-ataaaatcattcttgatatcta 7744916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 108; E-Value: 1e-53
Query Start/End: Original strand, 471 - 704
Target Start/End: Complemental strand, 31078856 - 31078623
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctg 570  Q
    ||||||||||| |||||||||||||||| |||||||||||||||| |||||||||||||||  | |||| ||||||||||  |||||||||||||| |||    
T  31078856 tatcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctg 31078757  T
Q  571 gctggaaatcatggggtggtgggtgttatgt-gnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattct 669  Q
    || ||||||||||||||| ||||||||||||           ||||||| ||||||||||||| |||||||||| | |||||| |||| |||||||||||    
T  31078756 gccggaaatcatggggtgatgggtgttatgtatcttttttttatgaaagattaataaatgagattgaaatctaaagatgattattgtgccatgtcattct 31078657  T
Q  670 taaatttttcttgataaaatcattcttgatatcta 704  Q
    | ||||||| || ||||||||||||||||||||||    
T  31078656 tgaattttt-tttataaaatcattcttgatatcta 31078623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 108; E-Value: 1e-53
Query Start/End: Original strand, 471 - 704
Target Start/End: Original strand, 36072975 - 36073212
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctg 570  Q
    ||||||||||| |||||||||||||||| ||||||| |||||||| |||||||||||||||  | |||| ||||||||||  ||||||||||||||||||    
T  36072975 tatcaagaaaatttcaagaatgacatggcagaataaccacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagtctg 36073074  T
Q  571 gctggaaatcatggggtggtgggtgttatg-----tgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtca 665  Q
    || |||||||||||||||||||||||||||     |          ||||||| |||||||||||||||||||||||| |||| ||| |||| |||||||    
T  36073075 gccggaaatcatggggtggtgggtgttatgtatcttttttttttttatgaaagattaataaatgagactgaaatctaaaggtggttattgtgccatgtca 36073174  T
Q  666 ttcttaaatttttcttgataaaatcattcttgatatcta 704  Q
    ||||| |||||||||| ||||||||||| ||||||||||    
T  36073175 ttcttgaatttttctt-ataaaatcatttttgatatcta 36073212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 471 - 704
Target Start/End: Complemental strand, 37934978 - 37934745
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctg 570  Q
    |||||| ||||  |||||||||||||||||||||| ||||||||| |||||||||||||||||| |||| ||||||||||  ||||||||||||||||||    
T  37934978 tatcaaaaaaatgtcaagaatgacatggtagaatactcacccttagattttatcaagaaattatcctgaaattaatgttaaccaataaaatctcagtctg 37934879  T
Q  571 gctggaaatcatggggtggtgggtgttatgtgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattctt 670  Q
    |  |||||| ||||| |||||| ||||||||          ||||||||||||||||||||| ||||||||||||||||||| |||||||| ||||| ||    
T  37934878 gtcggaaattatgggatggtggttgttatgtatttttttttatgaaaggttaataaatgagattgaaatctaagggtgattattgtgtcatatcattatt 37934779  T
Q  671 aaatttttcttgataaaatcattcttgatatcta 704  Q
     ||| |||||| ||||||||| || | |||||||    
T  37934778 gaatctttcttaataaaatcagtcataatatcta 37934745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 106; E-Value: 2e-52
Query Start/End: Original strand, 458 - 685
Target Start/End: Original strand, 30563224 - 30563452
Alignment:
Q  458 gagcaatgatatatatcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaata 557  Q
    |||||||| |||||||||||||| |||||| ||||||| || |||||| ||| | ||| |||||||||||||||||| |||  ||||||||| | |||||    
T  30563224 gagcaatgctatatatcaagaaagattcaacaatgacacggcagaatagtcatctttagattttatcaagaaattatcctgcaattaatgttggccaata 30563323  T
Q  558 aaatctcagtctggctggaaatcatggggtggtgggtgttatgt-gnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgt 656  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||           ||||||||||||||||| ||||||||||||||| ||||||| |||    
T  30563324 aaatctcagcctggccggaaatcatggggtggtgggtgttatgtattttttttttatgaaaggttaataaataagactgaaatctaagtgtgattattgt 30563423  T
Q  657 gtcatgtcattcttaaatttttcttgata 685  Q
    |||||||||||||| ||| ||||||||||    
T  30563424 gtcatgtcattcttgaatctttcttgata 30563452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 106; E-Value: 2e-52
Query Start/End: Original strand, 473 - 704
Target Start/End: Complemental strand, 50156613 - 50156383
Alignment:
Q  473 tcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctggc 572  Q
    ||||||||| || ||||||||||||| |||||||||||||||| |||||||||||||||  |  | | ||||||||||  |||||||||||||| |||||    
T  50156613 tcaagaaaattttaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcataaaattaatgttaaccaataaaatctcagcctggc 50156514  T
Q  573 tggaaatcatggggtggtgggtgttatgt-gnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattctta 671  Q
     ||||||||||||||||||||||||||||           ||||||| |||||||||||||||||||||||| |||||||| | |||||||||||||||     
T  50156513 cggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaa-ggtgattattatgtcatgtcattcttg 50156415  T
Q  672 aatttttcttgataaaatcattcttgatatcta 704  Q
    |||||||||| ||||||||||||||||||||||    
T  50156414 aatttttctt-ataaaatcattcttgatatcta 50156383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 103; E-Value: 9e-51
Query Start/End: Original strand, 471 - 704
Target Start/End: Original strand, 22199289 - 22199520
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctg 570  Q
    ||||||||||| |||||||||||||||| |||||||||| ||||| |||||||||||||||  |  ||| | ||||||||| |||||||||||||| |||    
T  22199289 tatcaagaaaatttcaagaatgacatggcagaataatcagccttagattttatcaagaaatagtcttgaaactaatgttagccaataaaatctcagcctg 22199388  T
Q  571 gctggaaatcatggggtggtgggtgttatgtgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattctt 670  Q
    ||  |||||||| ||||||||||||||||||          ||||||| |||||||||||||||||||||||| |||||||| |||| ||||||||||||    
T  22199389 gccagaaatcat-gggtggtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattctt 22199487  T
Q  671 aaatttttcttgataaaatcattcttgatatcta 704  Q
      || |||||| ||||||||||||||||||||||    
T  22199488 ggatctttctt-ataaaatcattcttgatatcta 22199520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 103; E-Value: 9e-51
Query Start/End: Original strand, 471 - 704
Target Start/End: Original strand, 42671697 - 42671930
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctg 570  Q
    |||||| ||||||| ||||||||||||| |||||||||||||||| |||||||||||||||| | || | ||||||||||  ||||||||||||| | ||    
T  42671697 tatcaaaaaaaatttaagaatgacatggcagaataatcacccttagattttatcaagaaattgtcctaaaattaatgttaaccaataaaatctcaatttg 42671796  T
Q  571 gctggaaatcatggggtggtgggtgttatgtgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattctt 670  Q
    || |||||| |||||||| || |||||||||          | |||||||||| |||||||||| |||||||||  |||||| | |||||||||||||||    
T  42671797 gccggaaattatggggtgatgagtgttatgtttttttttttacgaaaggttaacaaatgagactcaaatctaagaatgattattatgtcatgtcattctt 42671896  T
Q  671 aaatttttcttgataaaatcattcttgatatcta 704  Q
     ||| |||||||||||||||||||||||||||||    
T  42671897 gaatctttcttgataaaatcattcttgatatcta 42671930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 473 - 704
Target Start/End: Original strand, 24392697 - 24392935
Alignment:
Q  473 tcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctggc 572  Q
    |||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| | |||| |||||||||||||||||||||||| ||| |||    
T  24392697 tcaagaaaaattcaagaatgacatggcagaataatcacccttaaattttatcaagaaattgtactgaaattaatgttagtcaataaaatctctgtcgggc 24392796  T
Q  573 tggaaatcatggggtggtgggtgttatg----------tgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatg 662  Q
     ||||||||||||||| |||||||||||          |          ||||||||  |||||||||||||||||||||||| |||||| ||||  |||    
T  24392797 cggaaatcatggggtgatgggtgttatgtattttttttttattttttttatgaaagg--aataaatgagactgaaatctaaggatgattattgtgctatg 24392894  T
Q  663 tcattcttaaatttttcttgataaaatcattcttgatatcta 704  Q
    |||||||||||| ||||||||| |||||||||||||||||||    
T  24392895 tcattcttaaatatttcttgat-aaatcattcttgatatcta 24392935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 97; E-Value: 4e-47
Query Start/End: Original strand, 471 - 703
Target Start/End: Complemental strand, 23964502 - 23964269
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctg 570  Q
    |||||| |||| || ||||||||||||| |||||||||||||||| |||||||||||||||  |  ||| |||||||||||||||||||||||||| |||    
T  23964502 tatcaaaaaaattttaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcttgaaattaatgttagtcaataaaatctcagcctg 23964403  T
Q  571 gctggaaatcatggggtggtgggtgttatg--tgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattc 668  Q
     | |||||||||| ||||||||||||||||  |          ||||||| ||||||||||||| |||||||||| | |||||| | || ||||||||||    
T  23964402 accggaaatcatgcggtggtgggtgttatgtatttttttttttatgaaagattaataaatgagattgaaatctaaagatgattattatgccatgtcattc 23964303  T
Q  669 ttaaatttttcttgataaaatcattcttgatatct 703  Q
    |||||| |||||| |||||||||||||||||||||    
T  23964302 ttaaatctttctt-ataaaatcattcttgatatct 23964269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 471 - 704
Target Start/End: Complemental strand, 33530725 - 33530488
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctg 570  Q
    |||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||  |  ||| | ||||||||| ||||||||| |||| |||    
T  33530725 tatcaagaaaaattcaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcttgaaactaatgttagccaataaaatttcagcctg 33530626  T
Q  571 gctggaaatcatggggtggtgggtgttatg------tgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtc 664  Q
    || ||||||||| |||||||||||||||||      |          ||||||| ||||||||| |||||||||||||| |||||||| |||| ||||||    
T  33530625 gccggaaatcat-gggtggtgggtgttatgttttttttattttttttatgaaagattaataaataagactgaaatctaaaggtgattattgtgccatgtc 33530527  T
Q  665 attcttaaatttttcttgataaaatcattcttgatatcta 704  Q
    ||||||  || ||| || ||||||||||||||||||||||    
T  33530526 attcttggatcttt-tttataaaatcattcttgatatcta 33530488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 475 - 704
Target Start/End: Original strand, 44744467 - 44744690
Alignment:
Q  475 aagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctggctg 574  Q
    |||||| ||| || ||||||||||||||||||||||||||| |||||||||| ||||| | |||| ||| ||||||||| ||||||| |||||||||| |    
T  44744467 aagaaatatttaaaaatgacatggtagaataatcacccttaaattttatcaaaaaattgtcctgaaattgatgttagtcgataaaat-tcagtctggccg 44744565  T
Q  575 gaaatcatggggtggtgggtgttatgtgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaat 674  Q
    |||||||| ||||||||||||||||||           | | |||||||||||| |||||||||||||||| | |||| || |||||||||||||| ||     
T  44744566 gaaatcatagggtggtgggtgttatgtatttttttttgt-ataggttaataaataagactgaaatctaaggataattattgagtcatgtcattcttgaa- 44744663  T
Q  675 ttttcttgataaaatcattcttgatatcta 704  Q
       |||||||||||||||| ||||||||||    
T  44744664 ---tcttgataaaatcatttttgatatcta 44744690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 615 - 704
Target Start/End: Complemental strand, 11314144 - 11314055
Alignment:
Q  615 aaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 704  Q
    |||||||||||||| |||||  |||||||||||||||| |||||||||||||||||  || |||||||||||||||||||||||||||||    
T  11314144 aaaggttaataaataagactataatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttgatatcta 11314055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 475 - 601
Target Start/End: Complemental strand, 36073776 - 36073650
Alignment:
Q  475 aagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctggctg 574  Q
    |||||| ||| ||||||||||||  | |||||||||  ||| ||||||| |||||||| | || | |||||| |||| ||||||||||||||| |||| |    
T  36073776 aagaaagatttaagaatgacatgacaaaataatcacttttagattttatgaagaaattgtcctaaaattaatattagccaataaaatctcagtttggccg 36073677  T
Q  575 gaaatcatggggtggtgggtgttatgt 601  Q
    ||||||||||||||||| |||||||||    
T  36073676 gaaatcatggggtggtgcgtgttatgt 36073650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 636 - 701
Target Start/End: Original strand, 7745100 - 7745165
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    ||||||||||||||||| | || ||||||||||||||| |||||||||||||||| ||||||||||    
T  7745100 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatat 7745165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 636 - 701
Target Start/End: Original strand, 33530676 - 33530741
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    ||||||||||||||||| | || |||||||||||| ||||||||||||||||||| ||||||||||    
T  33530676 aaatctaagggtgattattctgccatgtcattcttgaatttttcttgataaaatctttcttgatat 33530741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 710 - 760
Target Start/End: Complemental strand, 4473126 - 4473076
Alignment:
Q  710 tctgtccctatatgtaagcacctttttattagaggaaaagattgcttacat 760  Q
    ||||||||||||||||||||||||||||||||||| ||||| |||||||||    
T  4473126 tctgtccctatatgtaagcacctttttattagaggcaaagagtgcttacat 4473076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 636 - 701
Target Start/End: Original strand, 10442777 - 10442842
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    ||||||||||||||||| | || |||||||||||| || |||||||||||||||| ||||||||||    
T  10442777 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 10442842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 636 - 701
Target Start/End: Original strand, 23964453 - 23964518
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    ||||||||||||||||| | || ||||||||||||||| |||| ||||||||||| ||||||||||    
T  23964453 aaatctaagggtgattattctgccatgtcattcttaaaatttttttgataaaatctttcttgatat 23964518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 636 - 701
Target Start/End: Original strand, 31078807 - 31078872
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    ||||||||||||||||| | || |||||||||||| || |||||||||||||||| ||||||||||    
T  31078807 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 31078872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 703 - 760
Target Start/End: Complemental strand, 32564904 - 32564847
Alignment:
Q  703 tactccctctgtccctatatgtaagcacctttttattagaggaaaagattgcttacat 760  Q
    ||||||||| ||||||||||||||||||| |||||||||||| ||||| |||||||||    
T  32564904 tactccctccgtccctatatgtaagcacccttttattagaggcaaagagtgcttacat 32564847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 620 - 693
Target Start/End: Complemental strand, 36073349 - 36073276
Alignment:
Q  620 ttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcatt 693  Q
    ||||||||| ||||||||||||||| || |||| | || ||| |||||||||||| ||||||||||||||||||    
T  36073349 ttaataaataagactgaaatctaagagtaattattctggcatatcattcttaaatctttcttgataaaatcatt 36073276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 636 - 701
Target Start/End: Complemental strand, 42671746 - 42671681
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    ||||||||||||||||| | || |||||||||||||||||||| ||||||||||| || |||||||    
T  42671746 aaatctaagggtgattattctgccatgtcattcttaaattttttttgataaaatctttattgatat 42671681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 636 - 701
Target Start/End: Original strand, 49387876 - 49387941
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    ||||||||||||||||| | || |||||||||||| || |||||||||||||||| ||||||||||    
T  49387876 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 49387941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 487 - 558
Target Start/End: Complemental strand, 11314255 - 11314184
Alignment:
Q  487 agaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataa 558  Q
    |||||||||||  |||||||||| ||||| ||| |||||||||||| |||||| ||||||||||| ||||||    
T  11314255 agaatgacatgacagaataatcatccttagattatatcaagaaattgttctgaaattaatgttagccaataa 11314184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 636 - 701
Target Start/End: Complemental strand, 2624914 - 2624849
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    ||||||||||||||||| | || ||| |||||||| || |||||||||||||||| ||||||||||    
T  2624914 aaatctaagggtgattattctgccatttcattcttgaaattttcttgataaaatctttcttgatat 2624849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 636 - 701
Target Start/End: Original strand, 21802310 - 21802375
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    ||||||||||||||||| | || |||||||||||| || |||||||||||||||  ||||||||||    
T  21802310 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatatttcttgatat 21802375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 636 - 701
Target Start/End: Complemental strand, 22199338 - 22199273
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    |||||||||| |||||| | || |||||||||||| || |||||||||||||||| ||||||||||    
T  22199338 aaatctaaggctgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 22199273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 636 - 701
Target Start/End: Complemental strand, 24392744 - 24392679
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    |||| |||||||||||| | || |||||||||||| |||||||||||| |||||| ||||||||||    
T  24392744 aaatttaagggtgattattctgccatgtcattcttgaatttttcttgagaaaatctttcttgatat 24392679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 659 - 704
Target Start/End: Complemental strand, 25063423 - 25063378
Alignment:
Q  659 catgtcattcttaaatttttcttgataaaatcattcttgatatcta 704  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||    
T  25063423 catgtcattcttgaatctttcttgataaaatcattcttgatatcta 25063378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 636 - 701
Target Start/End: Complemental strand, 36073024 - 36072959
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    ||||||||||||| ||| | || |||||||||||| || |||||||||||||||| ||||||||||    
T  36073024 aaatctaagggtggttattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 36072959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 636 - 701
Target Start/End: Complemental strand, 47290143 - 47290078
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    ||||||||||||||||| | || |||||||||||| || ||||||||| |||||| ||||||||||    
T  47290143 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatat 47290078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 636 - 701
Target Start/End: Original strand, 50156566 - 50156631
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    ||||||||||||||||| | || ||||||||||||||| ||||||||| |||||| ||||| ||||    
T  50156566 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttaatat 50156631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 471 - 515
Target Start/End: Original strand, 25063397 - 25063441
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcaccctta 515  Q
    |||||||||| ||||||||||||||||||||||||||||| ||||    
T  25063397 tatcaagaaagattcaagaatgacatggtagaataatcactctta 25063441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 636 - 700
Target Start/End: Original strand, 36073731 - 36073795
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgata 700  Q
    ||||||||  ||||||| | ||||||||||||||||||| |||||| |||||||| |||||||||    
T  36073731 aaatctaaaagtgattattttgtcatgtcattcttaaatctttcttcataaaatctttcttgata 36073795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 636 - 701
Target Start/End: Complemental strand, 4751523 - 4751458
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    ||||||||||||| ||| | || ||||||||||||  | |||||||||||||||| ||||||||||    
T  4751523 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatat 4751458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 703 - 760
Target Start/End: Original strand, 7209058 - 7209115
Alignment:
Q  703 tactccctctgtccctatatgtaagcacctttttattagaggaaaagattgcttacat 760  Q
    ||||||||| |||||||||| ||||||| ||||||||||||  ||||| |||||||||    
T  7209058 tactccctcagtccctatatctaagcacttttttattagagacaaagagtgcttacat 7209115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 636 - 701
Target Start/End: Complemental strand, 24128316 - 24128251
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    |||||||||| |||||| | || |||||||||||| || ||||||||| |||||| ||||||||||    
T  24128316 aaatctaaggatgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatat 24128251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 636 - 701
Target Start/End: Complemental strand, 36073427 - 36073362
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    |||| |||||||||||| | || |||||||||||| || ||||||||| |||||| ||||||||||    
T  36073427 aaatttaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatat 36073362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 636 - 701
Target Start/End: Complemental strand, 44893503 - 44893438
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    ||||||||||||||||| | || |||||||||||| || |||| |||| |||||| ||||||||||    
T  44893503 aaatctaagggtgattattctgccatgtcattcttgaaatttttttgaaaaaatctttcttgatat 44893438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 636 - 701
Target Start/End: Complemental strand, 46441921 - 46441856
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    ||||||||||||||||| | || |||||||||||| || ||||||| | |||||| ||||||||||    
T  46441921 aaatctaagggtgattattttgccatgtcattcttgaaattttcttaaaaaaatctttcttgatat 46441856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 475 - 520
Target Start/End: Complemental strand, 47290305 - 47290260
Alignment:
Q  475 aagaaaaattcaagaatgacatggtagaataatcacccttatattt 520  Q
    |||||||||||||||||||||||||| |||||||||| ||| ||||    
T  47290305 aagaaaaattcaagaatgacatggtacaataatcacctttagattt 47290260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 636 - 701
Target Start/End: Original strand, 44893201 - 44893267
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattctt-aaatttttcttgataaaatcattcttgatat 701  Q
    ||||||||||||||||| | || |||||||||||| |||||||| |||| |||||| ||||| ||||    
T  44893201 aaatctaagggtgattattctgccatgtcattcttgaaattttttttgaaaaaatctttcttaatat 44893267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 636 - 701
Target Start/End: Complemental strand, 53123108 - 53123042
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattctt-aaatttttcttgataaaatcattcttgatat 701  Q
    ||||||||||||||||| | || |||||||||||| |||||||  |||| |||||| ||||||||||    
T  53123108 aaatctaagggtgattattctgccatgtcattcttgaaattttctttgaaaaaatctttcttgatat 53123042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 636 - 685
Target Start/End: Complemental strand, 9088947 - 9088898
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgata 685  Q
    ||||||||||||||||| | || |||||||||||| || |||||||||||    
T  9088947 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgata 9088898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 475 - 520
Target Start/End: Complemental strand, 36073588 - 36073543
Alignment:
Q  475 aagaaaaattcaagaatgacatggtagaataatcacccttatattt 520  Q
    |||||||||||||||||||||||| | |||||||||| ||| ||||    
T  36073588 aagaaaaattcaagaatgacatggcacaataatcacctttagattt 36073543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 471 - 520
Target Start/End: Complemental strand, 37219874 - 37219825
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatattt 520  Q
    |||||||||| ||| ||||||||||||| |||||||||| ||||| ||||    
T  37219874 tatcaagaaagatttaagaatgacatggcagaataatcatccttagattt 37219825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 475 - 520
Target Start/End: Complemental strand, 46442083 - 46442038
Alignment:
Q  475 aagaaaaattcaagaatgacatggtagaataatcacccttatattt 520  Q
    |||||||||||||||||||||||| | |||||||||| ||| ||||    
T  46442083 aagaaaaattcaagaatgacatggcacaataatcacctttagattt 46442038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 475 - 520
Target Start/End: Original strand, 49387713 - 49387758
Alignment:
Q  475 aagaaaaattcaagaatgacatggtagaataatcacccttatattt 520  Q
    |||||||||||||||||||||||| | |||||||||| ||| ||||    
T  49387713 aagaaaaattcaagaatgacatggcacaataatcacctttagattt 49387758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 135; Significance: 7e-70; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 135; E-Value: 7e-70
Query Start/End: Original strand, 471 - 704
Target Start/End: Original strand, 44094726 - 44094958
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctg 570  Q
    ||||||||||| |||||||||||||||| |||||||||||||||| ||||||||||||||| || |||| ||||||||||| ||||||||||||||||||    
T  44094726 tatcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaattaatgttagccaataaaatctcagtctg 44094825  T
Q  571 gctggaaatcatggggtggtgggtgttatgtgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattctt 670  Q
    || ||||||||||||||||||||||||||||          ||||||| |||||||||||||||||||||||| |||||||| |||||||||||||||||    
T  44094826 gccggaaatcatggggtggtgggtgttatgtatttttctttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattctt 44094925  T
Q  671 aaatttttcttgataaaatcattcttgatatcta 704  Q
      || |||||| ||||||| ||||||||||||||    
T  44094926 ggatctttctt-ataaaataattcttgatatcta 44094958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 118; E-Value: 1e-59
Query Start/End: Original strand, 473 - 704
Target Start/End: Complemental strand, 36966743 - 36966512
Alignment:
Q  473 tcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctggc 572  Q
    ||||||||| ||||||||||| |||| |||||||||||||||| |||||||||||||||  | |||| ||||||||||  ||||||||||||||||||||    
T  36966743 tcaagaaaatttcaagaatgatatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagtctggc 36966644  T
Q  573 tggaaatcatggggtggtgggtgttatgt-gnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattctta 671  Q
     ||||||||||||||||||||||||||||           ||||||| |||||||||||||||||||||||| |||||||| |||| ||||| ||||||     
T  36966643 cggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgttattcttg 36966544  T
Q  672 aatttttcttgataaaatcattcttgatatcta 704  Q
    |||||||||| ||||||||||||||||||||||    
T  36966543 aatttttctt-ataaaatcattcttgatatcta 36966512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 471 - 704
Target Start/End: Original strand, 40215016 - 40215249
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctg 570  Q
    ||||||||||| |||||||||||||||| |||||||||||||||| |||||||||||||||  |  ||| ||||||||||| |||||||||||||| |||    
T  40215016 tatcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcttgaaattaatgttagccaataaaatctcagcctg 40215115  T
Q  571 gctggaaatcatggggtggtgggtgttatgt-gnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattct 669  Q
    || ||||||||||||||||||||||||||||           ||||||  |||||||||||||||||||||||| |||||||| |||| |||||||||||    
T  40215116 gccggaaatcatggggtggtgggtgttatgtattttttttttatgaaatattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattct 40215215  T
Q  670 taaatttttcttgataaaatcattcttgatatcta 704  Q
    | ||| |||||| ||||||||||||||||||||||    
T  40215216 tgaatctttctt-ataaaatcattcttgatatcta 40215249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 115; E-Value: 6e-58
Query Start/End: Original strand, 473 - 701
Target Start/End: Original strand, 19015434 - 19015662
Alignment:
Q  473 tcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctggc 572  Q
    ||||||||| ||||||||||| |||| |||||||||||||||| |||||||||||||||  | |||| ||||||||||  |||||||||||||| |||||    
T  19015434 tcaagaaaatttcaagaatgatatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctggc 19015533  T
Q  573 tggaaatcatggggtggtgggtgttatgt-gnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattctta 671  Q
     ||||||||||||||||||||||||||||           ||||||| |||||||||||||||||||||||| |||||||| |||| ||||||||||||     
T  19015534 cggaaatcatggggtggtgggtgttatgtatcttttttgtatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttg 19015633  T
Q  672 aatttttcttgataaaatcattcttgatat 701  Q
    |||||||||| |||||||||||||||||||    
T  19015634 aatttttctt-ataaaatcattcttgatat 19015662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 114; E-Value: 3e-57
Query Start/End: Original strand, 473 - 704
Target Start/End: Complemental strand, 37821869 - 37821638
Alignment:
Q  473 tcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctggc 572  Q
    ||||||||| ||||||||||| |||| |||||||||||||||| |||||||||||||||  | |||| ||||||||||  |||||||||||||| |||||    
T  37821869 tcaagaaaatttcaagaatgatatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctggc 37821770  T
Q  573 tggaaatcatggggtggtgggtgttatgt-gnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattctta 671  Q
     | ||||||||||||| ||||||||||||           ||||||| |||||||||||||||||||||||| |||||||| |||||||||||||||||     
T  37821769 cgaaaatcatggggtgttgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttg 37821670  T
Q  672 aatttttcttgataaaatcattcttgatatcta 704  Q
    |||||||||| ||||||||||||||||||||||    
T  37821669 aatttttctt-ataaaatcattcttgatatcta 37821638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 475 - 704
Target Start/End: Original strand, 6883519 - 6883748
Alignment:
Q  475 aagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctggctg 574  Q
    ||||||| |||||||||||||||| |||||||||||||||| |||||||||||||||  | |||| ||||||||||  |||||||||||||| ||||| |    
T  6883519 aagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctggccg 6883618  T
Q  575 gaaatcatggggtggtgggtgttatgt-gnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaa 673  Q
    |||||||||||||||||||||||||||           ||||||| |||||||||||||||||||||||| ||||| || | || |||||||||||| ||    
T  6883619 gaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgaatattatgccatgtcattcttgaa 6883718  T
Q  674 tttttcttgataaaatcattcttgatatcta 704  Q
    |||||||| ||||||||||||||||||||||    
T  6883719 tttttctt-ataaaatcattcttgatatcta 6883748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 106; E-Value: 2e-52
Query Start/End: Original strand, 471 - 704
Target Start/End: Original strand, 25973442 - 25973668
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctg 570  Q
    ||||| ||||| ||||||||||||| || |||||||||||||||| ||||||||||||||| || |||| ||||||||||| ||||||||||    ||||    
T  25973442 tatcatgaaaatttcaagaatgaca-ggcagaataatcacccttagattttatcaagaaataatcctgaaattaatgttagccaataaaatc----tctg 25973536  T
Q  571 gctggaaatcatggggtggtgggtgttatgtgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattctt 670  Q
    || | ||||||||||||||||||||||||||          ||||||| |||||||||||||||||||| ||| |||||||| |||||||||||||||||    
T  25973537 gccgaaaatcatggggtggtgggtgttatgt-attttttttatgaaagattaataaatgagactgaaatttaaaggtgattattgtgtcatgtcattctt 25973635  T
Q  671 aaatttttcttgataaaatcattcttgatatcta 704  Q
     |||||||||| ||||||||||||||||||||||    
T  25973636 gaatttttctt-ataaaatcattcttgatatcta 25973668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 475 - 704
Target Start/End: Original strand, 25463708 - 25463937
Alignment:
Q  475 aagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctggctg 574  Q
    ||||||| || ||||||||||||| |||||||||||||||| |||||||||||||||  |  ||| ||||||||||| |||||||||||||| ||||| |    
T  25463708 aagaaaattttaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcttgaaattaatgttagccaataaaatctcagcctggccg 25463807  T
Q  575 gaaatcatggggtggtgggtgttatgt-gnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaa 673  Q
    |||||||||||||||||||||||||||           ||||||| ||||||||||||||| |||||||| |||||||| |||| ||||||||||||  |    
T  25463808 gaaatcatggggtggtgggtgttatgtattttttttttatgaaagattaataaatgagacttaaatctaaaggtgattattgtgccatgtcattcttgga 25463907  T
Q  674 tttttcttgataaaatcattcttgatatcta 704  Q
    | |||||| ||||||||||||||||||||||    
T  25463908 tctttctt-ataaaatcattcttgatatcta 25463937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 102; E-Value: 4e-50
Query Start/End: Original strand, 473 - 704
Target Start/End: Complemental strand, 9910328 - 9910095
Alignment:
Q  473 tcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctggc 572  Q
    ||||||||| |||||||||||||||| |||||||||| ||||| |||||||||||||||  | |||| ||||||||||  ||||||||||||||| ||||    
T  9910328 tcaagaaaatttcaagaatgacatggcagaataatcaaccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagtatggc 9910229  T
Q  573 tggaaatcatggggtggtgggtgttatg---tgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattct 669  Q
     |||||||||||||||||||||||||||              ||||||| ||||||||| || ||||||||||| |||||||| |||| |||||||||||    
T  9910228 cggaaatcatggggtggtgggtgttatgcatcttttttttttatgaaagattaataaataagtctgaaatctaaaggtgattattgtgccatgtcattct 9910129  T
Q  670 taaatttttcttgataaaatcattcttgatatcta 704  Q
    | |||||||||| ||||||||||||||||||||||    
T  9910128 tgaatttttctt-ataaaatcattcttgatatcta 9910095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 102; E-Value: 4e-50
Query Start/End: Original strand, 473 - 704
Target Start/End: Complemental strand, 41876477 - 41876246
Alignment:
Q  473 tcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctggc 572  Q
    |||| |||| || ||||||||||||| ||||||||||||||||  ||||||||||||||  | |||| ||||||||||  |||||||||||||| |||||    
T  41876477 tcaaaaaaattttaagaatgacatggcagaataatcacccttaggttttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctggc 41876378  T
Q  573 tggaaatcatggggtggtgggtgttatgt-gnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattctta 671  Q
     | ||||||||||||||||||||||||||           ||||||| |||||||||||||||||||||||| |||||||| ||||  |||||||||||     
T  41876377 cgaaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgctatgtcattcttg 41876278  T
Q  672 aatttttcttgataaaatcattcttgatatcta 704  Q
    |||||||||| ||||||||||||||||||||||    
T  41876277 aatttttctt-ataaaatcattcttgatatcta 41876246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 102; E-Value: 4e-50
Query Start/End: Original strand, 473 - 704
Target Start/End: Original strand, 51737535 - 51737766
Alignment:
Q  473 tcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctggc 572  Q
    ||||||||| || |||||||| | || |||||||||||||||| |||||||||||||||  | |||| ||||||||||  |||||||||||||| ||| |    
T  51737535 tcaagaaaattttaagaatgataaggcagaataatcacccttaaattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctgac 51737634  T
Q  573 tggaaatcatggggtggtgggtgttatgt-gnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattctta 671  Q
     | ||||||||||||||||||||||||||           ||||||| |||||||||||||||||||||||| |||||||| |||| ||||||||||||     
T  51737635 cgaaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttg 51737734  T
Q  672 aatttttcttgataaaatcattcttgatatcta 704  Q
    |||||||||| ||||||||||||||||||||||    
T  51737735 aatttttctt-ataaaatcattcttgatatcta 51737766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 471 - 704
Target Start/End: Complemental strand, 33786672 - 33786435
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctg 570  Q
    |||||||||| ||||||||||||||||| | |||||||||||||| |||||||||||||||| | |||| ||||||||||| |||||||||||| ||| |    
T  33786672 tatcaagaaagattcaagaatgacatggcacaataatcacccttaaattttatcaagaaattgtactgaaattaatgttagccaataaaatctctgtcgg 33786573  T
Q  571 gctggaaatcatggggtggtgggtgttatg-------tgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgt 663  Q
    || ||||||||||||||||||| |||||||       |          ||||||||  ||||||||||||||||||||||||||||||| |||| |||||    
T  33786572 gccggaaatcatggggtggtggatgttatgcattttttttttttttttatgaaagg--aataaatgagactgaaatctaagggtgattattgtgccatgt 33786475  T
Q  664 cattcttaaatttttcttgataaaatcattcttgatatcta 704  Q
    ||||||| ||| ||||||||| |||||||||||||||||||    
T  33786474 cattcttgaatctttcttgat-aaatcattcttgatatcta 33786435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 471 - 704
Target Start/End: Original strand, 3559645 - 3559878
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctg 570  Q
    |||||| |||| || ||||||||||||| |||||||||||||||| |||||||||||||||  |  ||| ||||||||||| |||||||||||||| |||    
T  3559645 tatcaaaaaaattttaagaatgacatggcagaataatcacccttaaattttatcaagaaatagtcttgaaattaatgttagccaataaaatctcagcctg 3559744  T
Q  571 gctggaaatcatggggtggtgggtgtt-atgtgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattct 669  Q
    |  |||||||||||||||||||||||| ||||          ||||||| |||||||||||||||||||| ||| |||||||| |||||||| |||||||    
T  3559745 ggcggaaatcatggggtggtgggtgttaatgtatttttttttatgaaagattaataaatgagactgaaatataaaggtgattattgtgtcatatcattct 3559844  T
Q  670 taaatttttcttgataaaatcattcttgatatcta 704  Q
    |  || |||||| ||||||||||||||||||||||    
T  3559845 tggatctttctt-ataaaatcattcttgatatcta 3559878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 471 - 704
Target Start/End: Original strand, 18404470 - 18404709
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctg 570  Q
    ||||||||||| || |||||||||||||||||||||||||| ||| |||||||||||||||  | |||| ||||||||||| ||||||||||||||| ||    
T  18404470 tatcaagaaaattttaagaatgacatggtagaataatcacctttagattttatcaagaaatagtcctgaaattaatgttagccaataaaatctcagtttg 18404569  T
Q  571 gctggaaatcatggggtggtgggtgttatg-------tgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgt 663  Q
    |  ||||||||| |||||||||||||||||       |          ||||||| ||||||||||||||||||||||||  ||||||| |||| |||||    
T  18404570 gtcggaaatcatagggtggtgggtgttatgtattttttattttattttatgaaagattaataaatgagactgaaatctaaatgtgattattgtgccatgt 18404669  T
Q  664 cattcttaaatttttcttgataaaatcattcttgatatcta 704  Q
    ||||||||||| |||||| ||||||||||||||||||||||    
T  18404670 cattcttaaatctttctt-ataaaatcattcttgatatcta 18404709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 471 - 701
Target Start/End: Complemental strand, 27523292 - 27523062
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctg 570  Q
    |||||||||||||| ||||||||||||  |||||||||||||||| |||||||||||||||| | | || ||||||||||| |||||||||||||  |||    
T  27523292 tatcaagaaaaatttaagaatgacatgacagaataatcacccttaaattttatcaagaaattgtcccgaaattaatgttagccaataaaatctcatcctg 27523193  T
Q  571 gctggaaatcatggggtggtgggtgttatgtgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattctt 670  Q
    || ||||||||||||||| ||||||||||||          |||||| |||||||||| ||||| ||||| ||||||||||| | || |||   ||||||    
T  27523192 gccggaaatcatggggtgatgggtgttatgtatttttttttatgaaaagttaataaataagactaaaatcaaagggtgattaatctgccatacgattctt 27523093  T
Q  671 aaatttttcttgataaaatcattcttgatat 701  Q
     ||| ||||||||||||||||||||||||||    
T  27523092 gaatctttcttgataaaatcattcttgatat 27523062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 97; E-Value: 4e-47
Query Start/End: Original strand, 473 - 704
Target Start/End: Complemental strand, 32000302 - 32000070
Alignment:
Q  473 tcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctggc 572  Q
    |||||||||||||||||||||||||  ||||||| |||||||| |||||||||||||||| | |||| ||||||||||| |||||||||||  |||  ||    
T  32000302 tcaagaaaaattcaagaatgacatgacagaataaccacccttagattttatcaagaaattgtactgaaattaatgttagccaataaaatctatgtcgagc 32000203  T
Q  573 tggaaatcatggggtggtgggtgttatg----tgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattc 668  Q
     |||||||||||||||||||||||||||    |          ||||||  | ||||||||||||||||||||||||||||||| |||| ||||||||||    
T  32000202 cggaaatcatggggtggtgggtgttatgtattttttattttttatgaaa--tgaataaatgagactgaaatctaagggtgattattgtgccatgtcattc 32000105  T
Q  669 ttaaatttttcttgataaaatcattcttgatatcta 704  Q
    || ||| ||||||||| |||||||||||||||||||    
T  32000104 ttgaatctttcttgat-aaatcattcttgatatcta 32000070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 95; E-Value: 6e-46
Query Start/End: Original strand, 473 - 704
Target Start/End: Original strand, 40273732 - 40273969
Alignment:
Q  473 tcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctggc 572  Q
    |||||||||||||||||||||||||  | |||||||||||||| ||||||| |||||||| | |||| ||||||||||| |||||||||||| ||| |||    
T  40273732 tcaagaaaaattcaagaatgacatgtcaaaataatcacccttagattttattaagaaattgtactgaaattaatgttagccaataaaatctctgtcgggc 40273831  T
Q  573 tggaaatcatggggtggtgggtgttatg---------tgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgt 663  Q
     |||||||||||||||||||||||||||         |          ||||||||  ||||||||||||||||||||||||||||||| |||| |||||    
T  40273832 cggaaatcatggggtggtgggtgttatgtattatttttttttttttttatgaaagg--aataaatgagactgaaatctaagggtgattattgtgccatgt 40273929  T
Q  664 cattcttaaatttttcttgataaaatcattcttgatatcta 704  Q
    ||||||| ||| ||||||||| |||||||||||||||||||    
T  40273930 cattcttgaatatttcttgat-aaatcattcttgatatcta 40273969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 482 - 704
Target Start/End: Complemental strand, 44691055 - 44690825
Alignment:
Q  482 attcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctggctggaaatca 581  Q
    |||||||||| |||||| |||||||| || |||| |||||||||||||||||| |  | ||||||||||| |||||||||||||||||||| ||||||||    
T  44691055 attcaagaattacatggcagaataataactcttagattttatcaagaaattatcccaaaattaatgttagccaataaaatctcagtctggccggaaatca 44690956  T
Q  582 tggggtggtgggtgttatg--------tgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaa 673  Q
    ||||||| |||||||||||        |          || |||| ||||||||| |||||| |||||||||||||||| | || |||||||||||| ||    
T  44690955 tggggtgttgggtgttatgtatttattttttattttttataaaagattaataaataagactggaatctaagggtgattattctgccatgtcattcttgaa 44690856  T
Q  674 tttttcttgataaaatcattcttgatatcta 704  Q
    | |||||||||||||||||| ||||||||||    
T  44690855 tctttcttgataaaatcattattgatatcta 44690825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 517 - 704
Target Start/End: Complemental strand, 20305122 - 20304934
Alignment:
Q  517 attttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctggctggaaatcatggggtggtgggtgttatgtgnnnnnnnnn--atg 614  Q
    ||||||||||||||| || |||| ||||||||||| ||||||||||||||  |||| | |||||||||| |||||||||||||||            |||    
T  20305122 attttatcaagaaataatcctgaaattaatgttagccaataaaatctcagcttggccgaaaatcatgggatggtgggtgttatgtatttttttttttatg 20305023  T
Q  615 aaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 704  Q
    |||| || ||||||||||||||||||||| |||||||| |||| |||||||||||| ||| |||||| ||||||||||||||||||||||    
T  20305022 aaagattgataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatcta 20304934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 458 - 701
Target Start/End: Original strand, 10167415 - 10167658
Alignment:
Q  458 gagcaatgatatatatcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaata 557  Q
    |||||||| |||||||||||||| ||| |||||||||||| |||||||||||   ||| |||||||||| ||||| |  | | ||||||||||| |||||    
T  10167415 gagcaatgttatatatcaagaaagatttaagaatgacatgatagaataatcatttttagattttatcaaaaaattgtctttaaattaatgttagccaata 10167514  T
Q  558 aaatctcagtctggctggaaatcatggggtggtgggtgttatgtgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtg 657  Q
    |||| |  ||||| | |||||| ||||  ||||| ||||| |||          ||||||  ||||||||| |||||||||||||| |||||||| |||     
T  10167515 aaattttggtctgaccggaaattatggtttggtgtgtgttgtgtatttttttttatgaaaaattaataaataagactgaaatctaaaggtgattattgta 10167614  T
Q  658 tcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    |||| | |||||||||| ||| || |||||||||||||| ||||    
T  10167615 tcatattattcttaaatatttttttataaaatcattcttaatat 10167658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 471 - 560
Target Start/End: Complemental strand, 16045835 - 16045746
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattct-gatattaatgttagtcaataaaa 560  Q
    ||||||||||| |||||||||||||||| |||||||||||||||| ||||||||||||||| ||||| || ||||||||||| ||||||||    
T  16045835 tatcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaat-attcttgaaattaatgttagccaataaaa 16045746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 636 - 704
Target Start/End: Complemental strand, 19722970 - 19722903
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 704  Q
    |||||||| |||||||| ||||||||||||||||| ||| |||||| ||||||||||||||||||||||    
T  19722970 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatcta 19722903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 636 - 704
Target Start/End: Complemental strand, 40273779 - 40273711
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 704  Q
    ||||||||||||||||| | || |||||||||||| |||||||||||| |||||| |||||||||||||    
T  40273779 aaatctaagggtgattattttgacatgtcattcttgaatttttcttgaaaaaatctttcttgatatcta 40273711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 636 - 699
Target Start/End: Original strand, 27523243 - 27523306
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgat 699  Q
    |||| |||||||||||| | ||||||||||||||||||||||||||||||||||  ||||||||    
T  27523243 aaatttaagggtgattattctgtcatgtcattcttaaatttttcttgataaaattgttcttgat 27523306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 636 - 701
Target Start/End: Original strand, 16045786 - 16045851
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    ||||||||||||||||| | || |||||||||||| || |||||||||||||||| ||||||||||    
T  16045786 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 16045851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 636 - 701
Target Start/End: Complemental strand, 25463753 - 25463688
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    ||||||||||||||||| | || ||||||||||||||| ||||||| |||||||| ||||||||||    
T  25463753 aaatctaagggtgattattctgccatgtcattcttaaaattttcttcataaaatctttcttgatat 25463688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 636 - 701
Target Start/End: Original strand, 32000255 - 32000320
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    ||||||||||||| ||| | ||||||||||||||| |||||||||||| |||||| ||||||||||    
T  32000255 aaatctaagggtggttattctgtcatgtcattcttgaatttttcttgagaaaatctttcttgatat 32000320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 636 - 701
Target Start/End: Complemental strand, 40215065 - 40215000
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    ||||||||||||||||| | || |||||||||||| || |||||||||||||||| ||||||||||    
T  40215065 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 40215000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 636 - 704
Target Start/End: Original strand, 33786623 - 33786690
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 704  Q
    |||| |||||||||||| |||| |||||||||||| ||| ||||||||| |||||||||||||||||||    
T  33786623 aaatttaagggtgattattgtgccatgtcattcttgaatctttcttgat-aaatcattcttgatatcta 33786690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 640 - 704
Target Start/End: Complemental strand, 52064445 - 52064381
Alignment:
Q  640 ctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 704  Q
    |||||||||| || | ||||||||||||||| ||| |||||||||||||||||| ||||||||||    
T  52064445 ctaagggtgaatattctgtcatgtcattcttgaatctttcttgataaaatcatttttgatatcta 52064381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 636 - 701
Target Start/End: Complemental strand, 3559694 - 3559629
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    |||| |||||||||||| | || ||||||||||||||| |||| ||||||||||| ||||||||||    
T  3559694 aaatttaagggtgattattctgccatgtcattcttaaaatttttttgataaaatctttcttgatat 3559629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 636 - 701
Target Start/End: Complemental strand, 18404519 - 18404454
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    |||||||| |||||||| | |  ||||||||||||||| |||||||||||||||| ||||||||||    
T  18404519 aaatctaaaggtgattattctaccatgtcattcttaaaattttcttgataaaatctttcttgatat 18404454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 636 - 701
Target Start/End: Complemental strand, 44094775 - 44094710
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    ||||||||||||||||| | || |||||||||||| || |||||||||||||||  ||||||||||    
T  44094775 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatatttcttgatat 44094710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 471 - 515
Target Start/End: Original strand, 44690844 - 44690888
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcaccctta 515  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||    
T  44690844 tatcaagaaagattcaagaatgacatggcagaataatcaccctta 44690888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 636 - 701
Target Start/End: Original strand, 9910281 - 9910346
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    |||||||||| |||||| | || |||||||||||| || ||||||||| |||||| ||||||||||    
T  9910281 aaatctaaggttgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatat 9910346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 636 - 701
Target Start/End: Complemental strand, 19015481 - 19015416
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    ||||||||||||||||| | || ||| |||||||| || ||||||||| |||||| ||||||||||    
T  19015481 aaatctaagggtgattattctgccatatcattcttgaaattttcttgaaaaaatctttcttgatat 19015416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 471 - 520
Target Start/End: Original strand, 32000088 - 32000137
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatattt 520  Q
    |||||||||| ||||||||||||||||| | |||||||||||||| ||||    
T  32000088 tatcaagaaagattcaagaatgacatggcacaataatcacccttagattt 32000137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 471 - 520
Target Start/End: Original strand, 33786453 - 33786502
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatattt 520  Q
    |||||||||| ||||||||||||||||| | |||||||||||||| ||||    
T  33786453 tatcaagaaagattcaagaatgacatggcacaataatcacccttagattt 33786502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 636 - 701
Target Start/End: Original strand, 36966696 - 36966761
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    ||||||||||||||||| | || ||| |||||||| || ||||||||| |||||| ||||||||||    
T  36966696 aaatctaagggtgattattctgccatatcattcttgaaattttcttgaaaaaatctttcttgatat 36966761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 636 - 701
Target Start/End: Original strand, 37821822 - 37821887
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    ||||||||||||||||| | || ||| |||||||| || ||||||||| |||||| ||||||||||    
T  37821822 aaatctaagggtgattattctgccatatcattcttgaaattttcttgaaaaaatctttcttgatat 37821887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 471 - 520
Target Start/End: Complemental strand, 40273951 - 40273902
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatattt 520  Q
    |||||||||| ||||||||||||||||| | |||||||||||||| ||||    
T  40273951 tatcaagaaatattcaagaatgacatggcacaataatcacccttagattt 40273902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 640 - 701
Target Start/End: Original strand, 41876434 - 41876495
Alignment:
Q  640 ctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    ||||||||||||| | || ||||||||||||||| |||| |||| |||||| ||||||||||    
T  41876434 ctaagggtgattattctgccatgtcattcttaaaatttttttgaaaaaatctttcttgatat 41876495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 475 - 559
Target Start/End: Original strand, 34519790 - 34519874
Alignment:
Q  475 aagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaa 559  Q
    |||||| |||||| |||| ||| | |||||||||  ||||| |||||||||| ||||| | |||| ||||||||||| |||||||    
T  34519790 aagaaagattcaaaaatgccatagaagaataatcgaccttagattttatcaaaaaattgtcctgaaattaatgttagccaataaa 34519874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 519 - 601
Target Start/End: Original strand, 52329345 - 52329426
Alignment:
Q  519 tttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctggctggaaatcatggggtggtgggtgttatgt 601  Q
    ||||||||||||   ||| || ||||||||||  |||||||||||||| |||||  |||||||| ||||||| ||||||||||    
T  52329345 tttatcaagaaagagttccgaaattaatgttaaccaataaaatctcagcctggccagaaatcat-gggtggtaggtgttatgt 52329426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 612 - 670
Target Start/End: Original strand, 52329445 - 52329503
Alignment:
Q  612 atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattctt 670  Q
    |||||| |||||||| | ||||||||||||||||||||||| | ||  |||||||||||    
T  52329445 atgaaacgttaataattaagactgaaatctaagggtgattattctgctatgtcattctt 52329503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 636 - 701
Target Start/End: Complemental strand, 6883564 - 6883499
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    ||||||||||||||||| | || |||||||||||| || ||||||| | |||||| ||||| ||||    
T  6883564 aaatctaagggtgattattctgccatgtcattcttgaaattttcttaaaaaaatctttcttaatat 6883499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 475 - 520
Target Start/End: Original strand, 9910117 - 9910162
Alignment:
Q  475 aagaaaaattcaagaatgacatggtagaataatcacccttatattt 520  Q
    |||||||||||||||||||||||| | |||||||||| ||| ||||    
T  9910117 aagaaaaattcaagaatgacatggcacaataatcacctttagattt 9910162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 475 - 520
Target Start/End: Complemental strand, 19015643 - 19015598
Alignment:
Q  475 aagaaaaattcaagaatgacatggtagaataatcacccttatattt 520  Q
    |||||||||||||||||||||||| | |||||||||| ||| ||||    
T  19015643 aagaaaaattcaagaatgacatggcacaataatcacctttagattt 19015598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 636 - 701
Target Start/End: Complemental strand, 25973490 - 25973426
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    ||||||||||||||||| | || | |||||||||| || ||||| |||||||||| ||||||||||    
T  25973490 aaatctaagggtgattattctg-cctgtcattcttgaaattttcatgataaaatctttcttgatat 25973426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 475 - 520
Target Start/End: Complemental strand, 51737744 - 51737699
Alignment:
Q  475 aagaaaaattcaagaatgacatggtagaataatcacccttatattt 520  Q
    |||||||||||||||||||||||| | |||||||||| ||| ||||    
T  51737744 aagaaaaattcaagaatgacatggcacaataatcacctttagattt 51737699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 132; Significance: 5e-68; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 132; E-Value: 5e-68
Query Start/End: Original strand, 471 - 704
Target Start/End: Complemental strand, 4974772 - 4974539
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctg 570  Q
    ||||||||||| |||||||||||||||| |||||||||||||||| |||||||||||||||||| |||| ||||||||||| ||||||||||||||| ||    
T  4974772 tatcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaattatcctgaaattaatgttagccaataaaatctcagtttg 4974673  T
Q  571 gctggaaatcatggggtggtgggtgttatgt-gnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattct 669  Q
    || |||||||||| |||||||||||||||||           ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||    
T  4974672 gccggaaatcatgaggtggtgggtgttatgtattttttttttatgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgtcattct 4974573  T
Q  670 taaatttttcttgataaaatcattcttgatatcta 704  Q
    | ||| ||| || ||||||||||||||||||||||    
T  4974572 tgaatcttt-tttataaaatcattcttgatatcta 4974539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 123; E-Value: 1e-62
Query Start/End: Original strand, 471 - 704
Target Start/End: Original strand, 45637740 - 45637972
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctg 570  Q
    ||||||||||| |||||||||||||||| |||||||||||||||| |||||||||||||||  | |||| ||||||| ||| ||||||||||||||||||    
T  45637740 tatcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgctagccaataaaatctcagtctg 45637839  T
Q  571 gctggaaatcatggggtggtgggtgttatgtgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattctt 670  Q
    || ||||||||||||||||||| ||||||||          ||||||| |||||||||||||||||||||||| |||||||| |||| ||||||||||||    
T  45637840 gccggaaatcatggggtggtggatgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattctt 45637939  T
Q  671 aaatttttcttgataaaatcattcttgatatcta 704  Q
     ||| |||||| |||||||||||||| |||||||    
T  45637940 gaatctttctt-ataaaatcattcttaatatcta 45637972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 475 - 718
Target Start/End: Original strand, 29737171 - 29737420
Alignment:
Q  475 aagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctggctg 574  Q
    ||||||| || |||||||||||||||||||||||||||||| ||||||| |||||||| | | || ||||||||||| |||||||||||||  ||| | |    
T  29737171 aagaaaattttaagaatgacatggtagaataatcacccttagattttattaagaaattgtcccgaaattaatgttagccaataaaatctcaacctgaccg 29737270  T
Q  575 gaaatcatggggtggtgggtgttatgtgnnnnnnnnn------atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattc 668  Q
    ||||||||||||| ||||| |||||||                ||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||    
T  29737271 gaaatcatggggtagtgggagttatgtatttttttttctttctatgaaaggttaataaatgagactgaaatctaagggtgattattgtgacatgttattc 29737370  T
Q  669 ttaaatttttcttgataaaatcattcttgatatctactccctctgtccct 718  Q
    |||||| |||||||||||||||||||||||||||||||||||| ||||||    
T  29737371 ttaaatctttcttgataaaatcattcttgatatctactccctccgtccct 29737420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 113; E-Value: 1e-56
Query Start/End: Original strand, 458 - 704
Target Start/End: Original strand, 30848584 - 30848830
Alignment:
Q  458 gagcaatgatatatatcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaata 557  Q
    |||||||| ||||||||||||||| || ||||||||||||| |||||||||| ||||| |||||||||||||||  | |||| ||||||||||  |||||    
T  30848584 gagcaatgctatatatcaagaaaattttaagaatgacatggcagaataatcatccttagattttatcaagaaatagtcctgaaattaatgttaaccaata 30848683  T
Q  558 aaatctcagtctggctggaaatcatggggtggtgggtgttatgt-gnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgt 656  Q
    ||||||||||||||| |||||||||||| | |||||||||||||           ||||||| |||||||||||||||||||| ||| |||||||| |||    
T  30848684 aaatctcagtctggccggaaatcatgggatagtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatttaaaggtgattattgt 30848783  T
Q  657 gtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 704  Q
    | |||||||||||| |||||||||| |||||| |||||||||||||||    
T  30848784 gccatgtcattcttgaatttttctt-ataaaagcattcttgatatcta 30848830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 113; E-Value: 1e-56
Query Start/End: Original strand, 486 - 704
Target Start/End: Original strand, 42696126 - 42696345
Alignment:
Q  486 aagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctggctggaaatcatggg 585  Q
    ||||||||||| | ||||||||||||||||||||||||||||||||| | |||| |||||||||||||||||||||||||  ||||| |||||||| |||    
T  42696126 aagaatgacatagcagaataatcacccttatattttatcaagaaattgtcctgaaattaatgttagtcaataaaatctcaacctggccggaaatcaaggg 42696225  T
Q  586 gtggtgggtgttatgt-gnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgat 684  Q
    ||||||| ||||||||           |||||| |||||||||||||||||||||||||||||||||| |||  |||||||||||| ||||||| |||||    
T  42696226 gtggtggatgttatgtattttttttttatgaaaagttaataaatgagactgaaatctaagggtgattattgtaccatgtcattcttgaattttttttgat 42696325  T
Q  685 aaaatcattcttgatatcta 704  Q
    ||||||||| ||||||||||    
T  42696326 aaaatcattattgatatcta 42696345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 471 - 704
Target Start/End: Original strand, 42611839 - 42612072
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctg 570  Q
    ||||||||||| |||||||||||||||| |||||||||||||||| |||||||||||||||  |  ||| ||||||||||| ||||||||| ||||||||    
T  42611839 tatcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcttgaaattaatgttagccaataaaatttcagtctg 42611938  T
Q  571 gctggaaatcatggggtggtgggtgttatgt-gnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattct 669  Q
     | ||||||||||||||||||||||||||||           ||||||| ||||||||| |||||||||||||| |||||||| |||| |||||||||||    
T  42611939 accggaaatcatggggtggtgggtgttatgtattttttttttatgaaagattaataaataagactgaaatctaaaggtgattattgtgccatgtcattct 42612038  T
Q  670 taaatttttcttgataaaatcattcttgatatcta 704  Q
    || || |||||| ||||||||||||||||||||||    
T  42612039 tagatctttctt-ataaaatcattcttgatatcta 42612072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 471 - 704
Target Start/End: Complemental strand, 48880964 - 48880731
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctg 570  Q
    ||||||||||| |||||||||||||||  |||||||||||||||| |||||||||||||||  | |||| ||||||||||  |||||||||||||| |||    
T  48880964 tatcaagaaaatttcaagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctg 48880865  T
Q  571 gctggaaatcatggggtggtgggtgttatgt-gnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattct 669  Q
    || ||||||||||||||||||||||||||||           ||||||| ||||||||||| ||||||||||||  ||||||| |||| |||||||||||    
T  48880864 gccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgaaactgaaatctaaatgtgattattgtgccatgtcattct 48880765  T
Q  670 taaatttttcttgataaaatcattcttgatatcta 704  Q
    | |||||||||| ||||||||||||||||||||||    
T  48880764 tgaatttttctt-ataaaatcattcttgatatcta 48880731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 471 - 704
Target Start/End: Original strand, 3962007 - 3962239
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctg 570  Q
    ||||||||||| || ||||||||||||  |||||||||||||||| |||||||||||||||  |  ||| ||||||||||| ||||||||||||||  ||    
T  3962007 tatcaagaaaattttaagaatgacatgacagaataatcacccttaaattttatcaagaaatagtcttgaaattaatgttagccaataaaatctcagcttg 3962106  T
Q  571 gctggaaatcatggggtggtgggtgttatgtgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattctt 670  Q
    || ||||||||||||||||||||||||||||          ||||||| |||||||||||||||||||||||| |||||||| |||| ||||||||||||    
T  3962107 gccggaaatcatggggtggtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattctt 3962206  T
Q  671 aaatttttcttgataaaatcattcttgatatcta 704  Q
      || |||||| ||||||||||||||||||||||    
T  3962207 ggatatttctt-ataaaatcattcttgatatcta 3962239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 473 - 704
Target Start/End: Original strand, 15238412 - 15238645
Alignment:
Q  473 tcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctggc 572  Q
    |||||||||||||||||||||||||| |||||||||||| ||| |||||||||||||||| | |||| |||||||||||||||||||||||| ||| |||    
T  15238412 tcaagaaaaattcaagaatgacatggcagaataatcaccattagattttatcaagaaattgtactgaaattaatgttagtcaataaaatctctgtcgggc 15238511  T
Q  573 tggaaatcatggggtggtgggtgtta-----tgtgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcatt 667  Q
     |||||||||||||||||||||||||     | |          ||||||||  |||||||||||||||||||||||| |||||| ||||||||||||||    
T  15238512 cggaaatcatggggtggtgggtgttatttatttttattttttttatgaaagg--aataaatgagactgaaatctaaggatgattattgtgtcatgtcatt 15238609  T
Q  668 cttaaatttttcttgataaaatcattcttgatatcta 704  Q
    ||||||| ||| ||||| |||||||||||||||||||    
T  15238610 cttaaatattttttgat-aaatcattcttgatatcta 15238645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 471 - 704
Target Start/End: Original strand, 24395000 - 24395232
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctg 570  Q
    ||||||||||| || ||||||||||||| |||||||  ||| ||| |||||||||| ||||  |||||| ||||||||||| |||||||||||||  |||    
T  24395000 tatcaagaaaattttaagaatgacatggcagaataacaacctttagattttatcaaaaaatagttctgaaattaatgttagccaataaaatctcaacctg 24395099  T
Q  571 gctggaaatcatggggtggtgggtgttatgtgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattctt 670  Q
    || ||||||||||||||||||||||||||||          ||||||| |||||||||||||||||||||||| |||||||| |||| ||||||||||||    
T  24395100 gccggaaatcatggggtggtgggtgttatgtatttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattctt 24395199  T
Q  671 aaatttttcttgataaaatcattcttgatatcta 704  Q
     ||| ||| || ||||||||||||||||||||||    
T  24395200 gaatcttt-tttataaaatcattcttgatatcta 24395232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 103; E-Value: 9e-51
Query Start/End: Original strand, 473 - 704
Target Start/End: Complemental strand, 37477115 - 37476884
Alignment:
Q  473 tcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctggc 572  Q
    |||||||||||| ||||||||||||| |||||||||| ||||| |||||||||||||||| | |||| ||||||||||| |||||||||||| ||| |||    
T  37477115 tcaagaaaaatttaagaatgacatggcagaataatcatccttaaattttatcaagaaattgtactgaaattaatgttagccaataaaatctctgtcgggc 37477016  T
Q  573 tggaaatcatggggtggtgggtgttatg---tgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattct 669  Q
     |||||||||||||||||||||||||||   |          || |||  | ||||||||||||||||||||||||||||||| |||| ||||||||| |    
T  37477015 cggaaatcatggggtggtgggtgttatgtattttttttctgtataaaa--tgaataaatgagactgaaatctaagggtgattattgtgccatgtcattat 37476918  T
Q  670 taaatttttcttgataaaatcattcttgatatcta 704  Q
    ||||| ||||||||| |||||||||||||||||||    
T  37476917 taaatctttcttgat-aaatcattcttgatatcta 37476884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 102; E-Value: 4e-50
Query Start/End: Original strand, 471 - 704
Target Start/End: Original strand, 15329301 - 15329535
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctg 570  Q
    ||||||||||| |||||||||||||||  |||||||||||||||| |||||||||||||||  |  ||| |||||||||||||||||||||||||| |||    
T  15329301 tatcaagaaaatttcaagaatgacatgacagaataatcacccttagattttatcaagaaatagtcttgaaattaatgttagtcaataaaatctcagactg 15329400  T
Q  571 gctggaaatcatggggtggtgggtgtta--tgtgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattc 668  Q
    || |||||||||||||||||| ||||||  | |          ||||||| ||||||||||||||||||||||||  ||||||| |||| ||||||||||    
T  15329401 gccggaaatcatggggtggtgagtgttattttttttattttttatgaaagattaataaatgagactgaaatctaaaagtgattattgtgccatgtcattc 15329500  T
Q  669 ttaaatttttcttgataaaatcattcttgatatcta 704  Q
    || ||| |||||| |||||||||||||| |||||||    
T  15329501 ttgaatatttctt-ataaaatcattctttatatcta 15329535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 475 - 704
Target Start/End: Original strand, 34482867 - 34483099
Alignment:
Q  475 aagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctggctg 574  Q
    ||||||| || ||||||||||||| |||||||||||||||| |||||||||||||||  | |||| ||||||||||| |||||||||||||||||||| |    
T  34482867 aagaaaattttaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttagccaataaaatctcagtctggccg 34482966  T
Q  575 gaaatcatggggtggtgggtgttatg-----tgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattct 669  Q
    |||||||| |||||||||||||||||     |          ||||||| ||||||||||||| |||||||||| |||||||| |||| |||||||||||    
T  34482967 gaaatcat-gggtggtgggtgttatgtattttttttatttttatgaaagattaataaatgagattgaaatctaaaggtgattattgtgccatgtcattct 34483065  T
Q  670 taaatttttcttgataaaatcattcttgatatcta 704  Q
    | ||| |||||| ||||||||||||||||||||||    
T  34483066 tgaatctttctt-ataaaatcattcttgatatcta 34483099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 97; E-Value: 4e-47
Query Start/End: Original strand, 473 - 704
Target Start/End: Original strand, 18037008 - 18037238
Alignment:
Q  473 tcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctggc 572  Q
    |||||||||||| ||||||||||||| |||||||||||||||| |||||||||| ||||| | |||| ||||||||||| |||||||||||| ||| |||    
T  18037008 tcaagaaaaatttaagaatgacatggcagaataatcacccttaaattttatcaaaaaattgtactgaaattaatgttagccaataaaatctctgtcgggc 18037107  T
Q  573 tggaaatcatggggtggtgggtgttatg--tgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattctt 670  Q
      ||||||||||||||||||||||||||  |          |||| |||  |||||||| |||||||||||||||||||||| |||  ||||||||||||    
T  18037108 cagaaatcatggggtggtgggtgttatgtatttttttttttatgagagg--aataaatgtgactgaaatctaagggtgattattgtaccatgtcattctt 18037205  T
Q  671 aaatttttcttgataaaatcattcttgatatcta 704  Q
    |||| ||||||||| |||||||| ||||||||||    
T  18037206 aaatctttcttgat-aaatcattgttgatatcta 18037238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 95; E-Value: 6e-46
Query Start/End: Original strand, 471 - 704
Target Start/End: Complemental strand, 20010134 - 20009902
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctg 570  Q
    |||||| |||| ||||||||||||||   |||||||||||||||| |||||||||| ||||| | |||| ||||||||||| |||||||||||||  |||    
T  20010134 tatcaaaaaaatttcaagaatgacatac-agaataatcacccttagattttatcaaaaaattgtcctgaaattaatgttagccaataaaatctcaacctg 20010036  T
Q  571 gctggaaatcatggggtggtgggtgttatgtgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattctt 670  Q
    || |||||| |||||||  ||||||||||||          || |||||||||||||||||||| |||||||||  |||||| |||||||||||||||||    
T  20010035 gccggaaattatggggttatgggtgttatgtattttttcttattaaaggttaataaatgagactaaaatctaagtatgattattgtgtcatgtcattctt 20009936  T
Q  671 aaatttttcttgataaaatcattcttgatatcta 704  Q
     ||| ||| ||||||||||||||| |||||||||    
T  20009935 gaatcttttttgataaaatcattcatgatatcta 20009902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 471 - 704
Target Start/End: Complemental strand, 15577887 - 15577651
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctg 570  Q
    ||||||||||| |||||||||||||||| |||||||||||||||| | ||||||||||||   |  ||| ||||||||||| ||||| ||||||||||||    
T  15577887 tatcaagaaaatttcaagaatgacatggcagaataatcacccttagactttatcaagaaaaagtcttgaaattaatgttagccaatataatctcagtctg 15577788  T
Q  571 gctggaaatcatggggtggtgggtgttatg----tgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcat 666  Q
    || |||||||||||| ||||||||||||||    |          || |||| |||||||||||||||||||||||| |||||||| |||| ||||||||    
T  15577787 gccggaaatcatgggttggtgggtgttatgtatttttttttttttataaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcat 15577688  T
Q  667 tcttaaatttttcttgataaaatcattcttgatatcta 704  Q
    ||||  || |||||| ||||||||||||||||||||||    
T  15577687 tcttggatctttctt-ataaaatcattcttgatatcta 15577651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 93; E-Value: 9e-45
Query Start/End: Original strand, 475 - 704
Target Start/End: Complemental strand, 25167883 - 25167660
Alignment:
Q  475 aagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctggctg 574  Q
    ||||||| || ||||||||||||| |||||||||| ||||| |||||||||||||||  |||||| ||||||||||  |||||||||||||||||||| |    
T  25167883 aagaaaattttaagaatgacatggcagaataatcatccttagattttatcaagaaatagttctgaaattaatgttaaccaataaaatctcagtctggccg 25167784  T
Q  575 gaaatcatggggtggtgggtgttatgt-gnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaa 673  Q
    |||||||||||||| ||||||||||||           ||||||| ||      |||||||||||||||| |||||||| |||| |||||||||||| ||    
T  25167783 gaaatcatggggtgatgggtgttatgtatcttttttttatgaaagatt------tgagactgaaatctaaaggtgattattgtgccatgtcattcttgaa 25167690  T
Q  674 tttttcttgataaaatcattcttgatatcta 704  Q
    |||||||| ||||||||||||||||||||||    
T  25167689 tttttctt-ataaaatcattcttgatatcta 25167660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 473 - 599
Target Start/End: Original strand, 35444588 - 35444714
Alignment:
Q  473 tcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctggc 572  Q
    ||||||||| |||||||||||||||| |||||||||||||||| |||||||||||||||  |||||| ||||||||||  |||||||||||||| |||||    
T  35444588 tcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagttctgaaattaatgttaaccaataaaatctcagcctggc 35444687  T
Q  573 tggaaatcatggggtggtgggtgttat 599  Q
     | |||||||||| |||||||||||||    
T  35444688 cgaaaatcatgggatggtgggtgttat 35444714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 471 - 601
Target Start/End: Complemental strand, 36790503 - 36790373
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctg 570  Q
    |||||||||||||| ||||||||||||| |||||||| ||||||| |||||||||||||||| |||||| ||||||||||| |||||||||||||||||     
T  36790503 tatcaagaaaaatttaagaatgacatggcagaataattacccttaaattttatcaagaaattgttctgaaattaatgttagccaataaaatctcagtcta 36790404  T
Q  571 gctggaaatcatggggtggtgggtgttatgt 601  Q
    || | || |  | ||||||||||||||||||    
T  36790403 gccgaaattttttgggtggtgggtgttatgt 36790373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 612 - 704
Target Start/End: Original strand, 35445567 - 35445658
Alignment:
Q  612 atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 704  Q
    ||||||| |||||||||||||||||||||||| |||||||| |||||||| |||||||| |||||||||| ||||||||||||||||||||||    
T  35445567 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatatcattcttgaatttttctt-ataaaatcattcttgatatcta 35445658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 471 - 587
Target Start/End: Complemental strand, 40880829 - 40880713
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctg 570  Q
    |||||||||||| ||||||||||||||| |||||||||| ||||| ||||||| |||||||||| |||| ||||||||||| ||||||||||| || |||    
T  40880829 tatcaagaaaaactcaagaatgacatggcagaataatcatccttaaattttatgaagaaattatcctgaaattaatgttagccaataaaatcttagcctg 40880730  T
Q  571 gctggaaatcatggggt 587  Q
    |  | ||||||||||||    
T  40880729 gtcgaaaatcatggggt 40880713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 612 - 704
Target Start/End: Original strand, 35876414 - 35876505
Alignment:
Q  612 atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 704  Q
    ||||||| |||||||||||||||||||||||| |||||||| |||| ||||||||| ||| || |||||| ||||||||||||||||||||||    
T  35876414 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcatttttagatatttctt-ataaaatcattcttgatatcta 35876505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 636 - 701
Target Start/End: Complemental strand, 3962056 - 3961991
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    |||| |||||||||||| | |||||||||||||||||| |||||||||||||||| ||||||||||    
T  3962056 aaatttaagggtgattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatat 3961991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 636 - 701
Target Start/End: Complemental strand, 15329350 - 15329285
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    ||||||||||||||||| | ||||||||||||||| || |||||||||||||||| ||||||||||    
T  15329350 aaatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatat 15329285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 636 - 701
Target Start/End: Original strand, 48880915 - 48880980
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    ||||||||||||||||| | ||||||||||||||| || |||||||||||||||| ||||||||||    
T  48880915 aaatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatat 48880980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 636 - 701
Target Start/End: Original strand, 4974723 - 4974788
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    ||||||||||||||||| | || |||||||||||| || |||||||||||||||| ||||||||||    
T  4974723 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 4974788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 636 - 701
Target Start/End: Complemental strand, 18037055 - 18036990
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    |||| |||||||||||| | || ||||||||||||||||||||||||| |||||| ||||||||||    
T  18037055 aaatttaagggtgattattctgccatgtcattcttaaatttttcttgaaaaaatctttcttgatat 18036990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 636 - 701
Target Start/End: Complemental strand, 34482912 - 34482847
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    ||||||||||||||||| | || ||||||||||||||| ||||||| |||||||| ||||||||||    
T  34482912 aaatctaagggtgattattctgccatgtcattcttaaaattttcttaataaaatctttcttgatat 34482847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 636 - 701
Target Start/End: Complemental strand, 42611888 - 42611823
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    ||||||||||||||||| | || |||||||||||| || |||||||||||||||| ||||||||||    
T  42611888 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 42611823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 636 - 701
Target Start/End: Complemental strand, 45637789 - 45637724
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    ||||||||||||||||| | || |||||||||||| || |||||||||||||||| ||||||||||    
T  45637789 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 45637724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 639 - 701
Target Start/End: Original strand, 15577841 - 15577903
Alignment:
Q  639 tctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    |||||||||||||| | || |||||||||||| || |||||||||||||||| ||||||||||    
T  15577841 tctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 15577903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 636 - 701
Target Start/End: Original strand, 36790454 - 36790519
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    |||| ||||||| |||| | || |||||||||||||||||||||||||||||| | ||||||||||    
T  36790454 aaatttaagggtaattattctgccatgtcattcttaaatttttcttgataaaaactttcttgatat 36790519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 636 - 701
Target Start/End: Original strand, 37477068 - 37477133
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    |||| ||||| |||||| | || ||||||||||||||||||||||||| |||||| ||||||||||    
T  37477068 aaatttaaggatgattattctgccatgtcattcttaaatttttcttgagaaaatctttcttgatat 37477133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 471 - 520
Target Start/End: Complemental strand, 42696326 - 42696277
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatattt 520  Q
    |||||| ||||||||||||||||||||||| |||||||||||||| ||||    
T  42696326 tatcaaaaaaaattcaagaatgacatggtacaataatcacccttagattt 42696277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 659 - 701
Target Start/End: Complemental strand, 24395026 - 24394984
Alignment:
Q  659 catgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    ||||||||||||||| |||||||||||||||| ||||||||||    
T  24395026 catgtcattcttaaaattttcttgataaaatctttcttgatat 24394984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 702 - 748
Target Start/End: Complemental strand, 28885558 - 28885512
Alignment:
Q  702 ctactccctctgtccctatatgtaagcacctttttattagaggaaaa 748  Q
    |||||||||| |||| |||||||||||||| ||||||||||||||||    
T  28885558 ctactccctccgtccttatatgtaagcacccttttattagaggaaaa 28885512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 471 - 520
Target Start/End: Complemental strand, 18037220 - 18037171
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatattt 520  Q
    |||||||||| ||| ||||||||||||||| |||||||||||||| ||||    
T  18037220 tatcaagaaagatttaagaatgacatggtacaataatcacccttagattt 18037171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 636 - 701
Target Start/End: Original strand, 20010086 - 20010150
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    ||||||||||||||||| | ||| ||||||||||| || |||| ||||||||||| ||||||||||    
T  20010086 aaatctaagggtgattattctgt-atgtcattcttgaaatttttttgataaaatctttcttgatat 20010150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 458 - 515
Target Start/End: Complemental strand, 20953169 - 20953112
Alignment:
Q  458 gagcaatgatatatatcaagaaaaattcaagaatgacatggtagaataatcaccctta 515  Q
    |||||||| |||||||||| ||| |||||||||||| |||| | ||||||||||||||    
T  20953169 gagcaatgctatatatcaaaaaagattcaagaatgatatggcaaaataatcaccctta 20953112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 636 - 701
Target Start/End: Original strand, 25167838 - 25167903
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    |||||||||| |||||| | || ||||||||||||||| ||||||| | |||||| ||||||||||    
T  25167838 aaatctaaggatgattattctgccatgtcattcttaaaattttcttaaaaaaatctttcttgatat 25167903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 636 - 701
Target Start/End: Complemental strand, 29737216 - 29737151
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    ||||||||||||||||| | |  ||||||||||||||| ||||||| | |||||| ||||||||||    
T  29737216 aaatctaagggtgattattctaccatgtcattcttaaaattttcttaaaaaaatctttcttgatat 29737151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 636 - 701
Target Start/End: Complemental strand, 35444635 - 35444570
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    ||||||||||||||||| | || |||||||||||| || ||||||||| |||||| ||||| ||||    
T  35444635 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttaatat 35444570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 701 - 743
Target Start/End: Original strand, 32553681 - 32553723
Alignment:
Q  701 tctactccctctgtccctatatgtaagcacctttttattagag 743  Q
    ||||||||||| |||||||||||||| |||| |||||||||||    
T  32553681 tctactccctccgtccctatatgtaaacacccttttattagag 32553723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 636 - 701
Target Start/End: Complemental strand, 15238459 - 15238394
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    |||||||| |||||||| | || |||||||||||| |||||||||||| ||| |  ||||||||||    
T  15238459 aaatctaatggtgattattctgccatgtcattcttgaatttttcttgagaaattttttcttgatat 15238394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 475 - 520
Target Start/End: Original strand, 25167682 - 25167727
Alignment:
Q  475 aagaaaaattcaagaatgacatggtagaataatcacccttatattt 520  Q
    |||||||||||||||||||||||| | |||||||||| ||| ||||    
T  25167682 aagaaaaattcaagaatgacatggcacaataatcacctttagattt 25167727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 636 - 685
Target Start/End: Complemental strand, 30848646 - 30848597
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgata 685  Q
    |||||||||| |||||| | || ||||||||||||||| |||||||||||    
T  30848646 aaatctaaggatgattattctgccatgtcattcttaaaattttcttgata 30848597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 475 - 520
Target Start/End: Complemental strand, 30848808 - 30848763
Alignment:
Q  475 aagaaaaattcaagaatgacatggtagaataatcacccttatattt 520  Q
    |||||||||||||||||||||||| | |||||||||| ||| ||||    
T  30848808 aagaaaaattcaagaatgacatggcacaataatcacctttaaattt 30848763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 648 - 701
Target Start/End: Complemental strand, 36790336 - 36790283
Alignment:
Q  648 gattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    ||||| ||||||||||||||||| ||| ||| ||||||||| |||| |||||||    
T  36790336 gattattgtgtcatgtcattcttgaatctttgttgataaaaccattattgatat 36790283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 131; Significance: 2e-67; HSPs: 80)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 131; E-Value: 2e-67
Query Start/End: Original strand, 471 - 704
Target Start/End: Original strand, 34665410 - 34665642
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctg 570  Q
    ||||||||||| |||||||||||||||| |||||||||||||||| |||||||||||||||| | |||| ||||||||||| ||||||||||||||  ||    
T  34665410 tatcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttagccaataaaatctcagcttg 34665509  T
Q  571 gctggaaatcatggggtggtgggtgttatgtgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattctt 670  Q
    || | ||||||||| ||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  34665510 gccgaaaatcatggagtggtgggtgttatgtatttttttttatgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgtcattctt 34665609  T
Q  671 aaatttttcttgataaaatcattcttgatatcta 704  Q
     ||| |||||| ||||||||||||||||||||||    
T  34665610 gaatctttctt-ataaaatcattcttgatatcta 34665642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 130; E-Value: 7e-67
Query Start/End: Original strand, 471 - 704
Target Start/End: Original strand, 32064773 - 32065007
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctg 570  Q
    ||||||||||| |||||||||||||||| |||||||||||||||| ||||||||||||||| ||||||| ||||||||||  |||||||||||||| |||    
T  32064773 tatcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataattctgaaattaatgttaaccaataaaatctcagcctg 32064872  T
Q  571 gctggaaatcatggggtggtgggtgttatg--tgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattc 668  Q
    || |||||||||||| || |||||||||||  |          ||||||| |||||||||||||||||||||||| |||||||| |||||||||||||||    
T  32064873 gccggaaatcatgggctgatgggtgttatgtatctttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattc 32064972  T
Q  669 ttaaatttttcttgataaaatcattcttgatatcta 704  Q
    ||||||||||||| ||||||||||||||||||||||    
T  32064973 ttaaatttttctt-ataaaatcattcttgatatcta 32065007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 128; E-Value: 1e-65
Query Start/End: Original strand, 471 - 704
Target Start/End: Complemental strand, 20091838 - 20091605
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctg 570  Q
    ||||||||||| |||||||||||||||| |||||||||||||||| |||||||||||||||  | |||| ||||||||||| |||||||||||||| ||     
T  20091838 tatcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaatcgtcctgaaattaatgttagccaataaaatctcagccta 20091739  T
Q  571 gctggaaatcatggggtggtgggtgttatgt-gnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattct 669  Q
    || ||||||||||||||||||||||||||||           ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||    
T  20091738 gccggaaatcatggggtggtgggtgttatgtattttttttttatgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgtcattct 20091639  T
Q  670 taaatttttcttgataaaatcattcttgatatcta 704  Q
    | ||| |||||| ||||||||||||||||||||||    
T  20091638 tgaatctttctt-ataaaatcattcttgatatcta 20091605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 122; E-Value: 4e-62
Query Start/End: Original strand, 473 - 704
Target Start/End: Complemental strand, 17841885 - 17841654
Alignment:
Q  473 tcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctggc 572  Q
    ||||||||| |||||||||||||||| |||||||||||||||| |||||||||||||||  | |||| ||||||||||  |||||||||||||| |||||    
T  17841885 tcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctggc 17841786  T
Q  573 tggaaatcatggggtggtgggtgttatgt-gnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattctta 671  Q
     ||||||||||||||||||||||||||||           ||||||| |||||||||||||||||||||||| |||||||| |||| ||||||||||||     
T  17841785 cggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttg 17841686  T
Q  672 aatttttcttgataaaatcattcttgatatcta 704  Q
    |||||||||| ||||||||||||||||||||||    
T  17841685 aatttttctt-ataaaatcattcttgatatcta 17841654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 120; E-Value: 7e-61
Query Start/End: Original strand, 475 - 704
Target Start/End: Complemental strand, 6108266 - 6108037
Alignment:
Q  475 aagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctggctg 574  Q
    ||||||| || ||||||||||||| |||||||||||||||| |||||||||||||||  | |||| ||||||||||  |||||||||||||| ||||| |    
T  6108266 aagaaaattttaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctggccg 6108167  T
Q  575 gaaatcatggggtggtgggtgttatgt-gnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaa 673  Q
    |||||||||||||||||||||||||||           ||||||| |||||||||||||||||||||||| |||||||| ||||||||||||||||| ||    
T  6108166 gaaatcatggggtggtgggtgttatgtatcttctttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaa 6108067  T
Q  674 tttttcttgataaaatcattcttgatatcta 704  Q
    |||||||| ||||||||||||||||||||||    
T  6108066 tttttctt-ataaaatcattcttgatatcta 6108037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 119; E-Value: 3e-60
Query Start/End: Original strand, 471 - 704
Target Start/End: Complemental strand, 37986092 - 37985860
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctg 570  Q
    |||||| |||| || ||||||||||||| |||||||||||||||| |||||||||||||||  | |||| ||||||| ||| ||||||||||||||||||    
T  37986092 tatcaaaaaaattttaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgctagccaataaaatctcagtctg 37985993  T
Q  571 gctggaaatcatggggtggtgggtgttatgtgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattctt 670  Q
    || ||||||||||||||||||||||||||||          ||||||| |||||||||| ||||||||||||| |||||||| |||| ||||||||||||    
T  37985992 gccggaaatcatggggtggtgggtgttatgtatttttttttatgaaagattaataaatgggactgaaatctaaaggtgattattgtgccatgtcattctt 37985893  T
Q  671 aaatttttcttgataaaatcattcttgatatcta 704  Q
     ||| |||||| ||||||||||||||||||||||    
T  37985892 gaatctttctt-ataaaatcattcttgatatcta 37985860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 118; E-Value: 1e-59
Query Start/End: Original strand, 473 - 704
Target Start/End: Complemental strand, 40780164 - 40779933
Alignment:
Q  473 tcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctggc 572  Q
    ||||||||| |||||||||||||||| |||||||||||||||| |||||||||||||||  | |||| ||||||||||  |||||||||||||| |||||    
T  40780164 tcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctggc 40780065  T
Q  573 tggaaatcatggggtggtgggtgttatgt-gnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattctta 671  Q
     ||||||||||||||||||| ||||||||           ||||||| |||||||||||||||||||||||| |||||||| |||| ||||||||||||     
T  40780064 cggaaatcatggggtggtggatgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttg 40779965  T
Q  672 aatttttcttgataaaatcattcttgatatcta 704  Q
    |||||||||| ||||||||||||||||||||||    
T  40779964 aatttttctt-ataaaatcattcttgatatcta 40779933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 467 - 704
Target Start/End: Complemental strand, 3597082 - 3596845
Alignment:
Q  467 tatatatcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcag 566  Q
    ||||||||||||||  |||||||||||||||| |||||||| ||||||| |||||||||||||||  | |||| ||||||||||  ||||||||||||||    
T  3597082 tatatatcaagaaagtttcaagaatgacatggcagaataattacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcag 3596983  T
Q  567 tctggctggaaatcatggggtggtgggtgttatgt-gnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtca 665  Q
     ||| | ||||||||||||||||||||||||||||           ||||||| |||||||||||||||||||||||| |||||||| |||| ||| |||    
T  3596982 cctgaccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatatca 3596883  T
Q  666 ttcttaaatttttcttgataaaatcattcttgatatcta 704  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  3596882 ttcttaaatttttctt-ataaaatcattcttgatatcta 3596845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 471 - 704
Target Start/End: Complemental strand, 42755079 - 42754846
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctg 570  Q
    ||||||||||| |||||||||||||||| |||||||||||||||| |||||||||||||||  |  ||| ||||||||||  |||||||||||||| |||    
T  42755079 tatcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcatgaaattaatgttaaccaataaaatctcagcctg 42754980  T
Q  571 gctggaaatcatggggtggtgggtgttatgt-gnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattct 669  Q
    || | |||||||||| |||||||||||||||           ||||||| |||||||||||||||||||||||| |||||||| |||  |||||||||||    
T  42754979 gccgaaaatcatgggatggtgggtgttatgtattttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtaccatgtcattct 42754880  T
Q  670 taaatttttcttgataaaatcattcttgatatcta 704  Q
    |||||||||||| ||||||||||||||||||||||    
T  42754879 taaatttttctt-ataaaatcattcttgatatcta 42754846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 108; E-Value: 1e-53
Query Start/End: Original strand, 475 - 704
Target Start/End: Complemental strand, 25581272 - 25581043
Alignment:
Q  475 aagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctggctg 574  Q
    ||||||| |||||||||||||||| | |||||||||| ||| |||||||||||||||  | |||| ||||||||||  |||||||||||||| ||| | |    
T  25581272 aagaaaatttcaagaatgacatggcaaaataatcacctttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctgaccg 25581173  T
Q  575 gaaatcatggggtggtgggtgttatgt-gnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaa 673  Q
    |||||||||||||||||||||||||||           ||||||| |||||||||||||||||||||||| |||||||| ||||| ||||||||||| ||    
T  25581172 gaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaa 25581073  T
Q  674 tttttcttgataaaatcattcttgatatcta 704  Q
    |||||||| ||||||||||||||||||||||    
T  25581072 tttttctt-ataaaatcattcttgatatcta 25581043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 108; E-Value: 1e-53
Query Start/End: Original strand, 471 - 701
Target Start/End: Original strand, 32393886 - 32394114
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctg 570  Q
    ||||||||||| || ||||||||||||| |||||||||||||||| |||||||||||||||  |  ||| ||||||||||| |||||||||||||||||     
T  32393886 tatcaagaaaattttaagaatgacatggcagaataatcacccttaaattttatcaagaaatagtcttgaaattaatgttagccaataaaatctcagtcta 32393985  T
Q  571 gctggaaatcatggggtggtgggtgttatgtgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattctt 670  Q
    || | ||||||||||||||| ||||||||||          ||||||| |||||||||||||||||||||||| |||||||| |||| ||||||||||||    
T  32393986 gccgaaaatcatggggtggtaggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtg-catgtcattctt 32394084  T
Q  671 aaatttttcttgataaaatcattcttgatat 701  Q
    |||| ||| || |||||||||||||||||||    
T  32394085 aaatattt-tttataaaatcattcttgatat 32394114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 105; E-Value: 6e-52
Query Start/End: Original strand, 471 - 704
Target Start/End: Complemental strand, 26042153 - 26041917
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatatttt---atcaagaaattattctgatattaatgttagtcaataaaatctcagt 567  Q
    ||||||||||| |||||||||||||||  |||||||||||||||| |||||   ||||||||||  | |||| ||||||||||  ||||||||||||||     
T  26042153 tatcaagaaaatttcaagaatgacatgacagaataatcacccttagatttttttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagc 26042054  T
Q  568 ctggctggaaatcatggggtggtgggtgttatgt-gnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcat 666  Q
    ||| | ||||||||||||||||||||||||||||           ||||||| |||||||||||||||||||||||| |||||||| |||| ||||||||    
T  26042053 ctgaccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcat 26041954  T
Q  667 tcttaaatttttcttgataaaatcattcttgatatcta 704  Q
    |||| |||||||||| ||||||||||||||||||||||    
T  26041953 tcttgaatttttctt-ataaaatcattcttgatatcta 26041917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 471 - 704
Target Start/End: Original strand, 15187588 - 15187821
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctc-agtct 569  Q
    ||||||||||| ||||||||||| |||| |||||||| ||||||| |||||||||||||||  |  ||| ||||||||||| |||||||||||| || ||    
T  15187588 tatcaagaaaatttcaagaatgatatggcagaataattacccttagattttatcaagaaatagtcttgaaattaatgttagccaataaaatctctagcct 15187687  T
Q  570 ggctggaaatcatggggtggtgggtgttatgtgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattct 669  Q
    ||| ||||||||||| ||||||||||||||||          ||||||| |||||||||||||||||||||||| |||||||| ||||  ||||||||||    
T  15187688 ggccggaaatcatggagtggtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgctatgtcattct 15187787  T
Q  670 taaatttttcttgataaaatcattcttgatatcta 704  Q
    |  || |||||| ||||||||||||||||||||||    
T  15187788 tggatctttctt-ataaaatcattcttgatatcta 15187821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 478 - 704
Target Start/End: Complemental strand, 30835077 - 30834859
Alignment:
Q  478 aaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctggctggaa 577  Q
    ||||||||||||||||||||| |||||||||||||||  |||||||||||||||| | |||| |||||||||||||||||||||||||        ||||    
T  30835077 aaaaattcaagaatgacatggcagaataatcaccctttgattttatcaagaaattgtcctgaaattaatgttagtcaataaaatctca--------ggaa 30834986  T
Q  578 atcatggggtggtgggtgttatgtgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttt 677  Q
    ||||||||||||||||||||||||          || ||| ||| | |||| | ||||||||||||||||| ||| | ||||||||||||||| ||| ||    
T  30834985 atcatggggtggtgggtgttatgtattttattttatcaaaagttgaaaaataacactgaaatctaagggtggttattctgtcatgtcattctttaatctt 30834886  T
Q  678 tcttgataaaatcattcttgatatcta 704  Q
    |||||||||||||||||||||||||||    
T  30834885 tcttgataaaatcattcttgatatcta 30834859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 473 - 701
Target Start/End: Original strand, 35353071 - 35353299
Alignment:
Q  473 tcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctggc 572  Q
    ||||||||| || ||||||||||||| |||||||||||||||| ||||||||||||||| ||  ||| ||||||||||  |||||||||||||| |||||    
T  35353071 tcaagaaaattttaagaatgacatggcagaataatcacccttagattttatcaagaaataatcatgaaattaatgttaaccaataaaatctcagcctggc 35353170  T
Q  573 tggaaatcatggggtggtgggtgttatgt-gnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattctta 671  Q
     |||||||||| |||||||||||||||||           ||||||| ||||||||||||| | |||| ||| |||||||| |||| ||||||||||||     
T  35353171 cggaaatcatgaggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagattaaaatttaaaggtgattattgtgccatgtcattcttg 35353270  T
Q  672 aatttttcttgataaaatcattcttgatat 701  Q
    |||||||||| |||||||||||||||||||    
T  35353271 aatttttctt-ataaaatcattcttgatat 35353299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 473 - 704
Target Start/End: Complemental strand, 31347817 - 31347580
Alignment:
Q  473 tcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctggc 572  Q
    |||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| | |||| ||||||||||| |||||||||||| ||| |||    
T  31347817 tcaagaaaaattcaagaatgacatggcagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttagccaataaaatctctgtcgggc 31347718  T
Q  573 tggaaatcatggggtggtgggtgttatg----tgnnnnnnnnnatgaaagg-ttaa--taaatgagactgaaatctaagggtgattactgtgtcatgtca 665  Q
      ||||||||||||| ||||||||||||    |          ||||||||  |||  |||||||||||||||||||| |||||||| |||| |||||||    
T  31347717 cagaaatcatggggtagtgggtgttatgtatttttttttttttatgaaaggaataaattaaatgagactgaaatctaaaggtgattattgtgccatgtca 31347618  T
Q  666 ttcttaaatttttcttgataaaatcattcttgatatcta 704  Q
    ||||| ||| ||||||||| |||||||||||||||||||    
T  31347617 ttcttgaatctttcttgat-aaatcattcttgatatcta 31347580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 471 - 704
Target Start/End: Complemental strand, 1646002 - 1645768
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctg 570  Q
    ||||||||||| || ||||| ||||||| |||||||||||||||| |||||||||||||||  |  ||| |||||||||||  ||||||||||||| |||    
T  1646002 tatcaagaaaattttaagaaagacatggcagaataatcacccttagattttatcaagaaatagtcttgaaattaatgttagctaataaaatctcagcctg 1645903  T
Q  571 gctggaaatcatggggtggtgggtgttatg--tgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattc 668  Q
    |  |||||||||||||||||||||||||||  |          ||||||| |||||||||||||||||||||||| |||||||| |||| ||||||||||    
T  1645902 gtcggaaatcatggggtggtgggtgttatgtatttttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattc 1645803  T
Q  669 ttaaatttttcttgataaaatcattcttgatatcta 704  Q
    ||   | |||||| ||||||||||||||||||||||    
T  1645802 ttggttctttctt-ataaaatcattcttgatatcta 1645768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 93; E-Value: 9e-45
Query Start/End: Original strand, 473 - 704
Target Start/End: Original strand, 7022008 - 7022240
Alignment:
Q  473 tcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctggc 572  Q
    ||||||||||||||||||||| |||| |||||||||||||||| |||||||||||||||| | | || ||||||||||| |||||||||||  ||| |||    
T  7022008 tcaagaaaaattcaagaatgatatggcagaataatcacccttagattttatcaagaaattgtaccgaaattaatgttagccaataaaatctatgtcgggc 7022107  T
Q  573 tggaaatcatggggtggtgggtgttatg----tgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattc 668  Q
     |||||||||||||||||||||||||||    |          ||||||||  ||||||||||||||||||||||||| ||||| |||| | ||||||||    
T  7022108 cggaaatcatggggtggtgggtgttatgtatttttttttttttatgaaagg--aataaatgagactgaaatctaagggcgattattgtgacttgtcattc 7022205  T
Q  669 ttaaatttttcttgataaaatcattcttgatatcta 704  Q
    || ||| ||||||||| |||||||| ||||||||||    
T  7022206 ttgaatctttcttgat-aaatcattgttgatatcta 7022240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 462 - 704
Target Start/End: Complemental strand, 3890662 - 3890418
Alignment:
Q  462 aatgatatatatcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaat 561  Q
    |||| |||||||||||||||||||||||||||||||| |||||||||| ||||| |||||||||||||||| |   || ||||||||||| |||||||||    
T  3890662 aatgctatatatcaagaaaaattcaagaatgacatggcagaataatca-ccttagattttatcaagaaattgtctcgaaattaatgttagccaataaaat 3890564  T
Q  562 ctcagtctggctggaaatcatggggtggtgggtgttatgtgnnnnnnnnnatga----aaggttaataaatgagactgaaatctaagggtgattactgtg 657  Q
    ||||   |||||| ||||||||||||||||||||||||||          || |    ||||||||||||| ||| | |||||||| |||||||| | ||    
T  3890563 ctcatcatggctgaaaatcatggggtggtgggtgttatgt-attttttttataaaattaaggttaataaataagattaaaatctaatggtgattattctg 3890465  T
Q  658 tcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 704  Q
     ||| |||||||| ||| |||||||||||||||||||||||||||||    
T  3890464 ccatatcattcttgaatctttcttgataaaatcattcttgatatcta 3890418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 475 - 704
Target Start/End: Complemental strand, 24844891 - 24844664
Alignment:
Q  475 aagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctggctg 574  Q
    |||||||||||||||||||||||  | |||||||||||||| |||||||||||||||| | | || ||||||||||| |||||||||||||  |||  ||    
T  24844891 aagaaaaattcaagaatgacatgaca-aataatcacccttagattttatcaagaaattgtcccgaaattaatgttagccaataaaatctcatcctgattg 24844793  T
Q  575 gaaatcatggggtggtgggtgttatgtgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaat 674  Q
    |||||||| ||||||||||||||||||          ||||||||||||||| | ||| | ||||||||| ||||||| | || |||| |||||||||||    
T  24844792 gaaatcatagggtggtgggtgttatgt-attttttttatgaaaggttaataattaagattaaaatctaagagtgattattttgccatgccattcttaaat 24844694  T
Q  675 ttttcttgataaaatcattcttgatatcta 704  Q
     |||||||||||||||||| ||||||||||    
T  24844693 ctttcttgataaaatcattattgatatcta 24844664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 473 - 681
Target Start/End: Original strand, 8453864 - 8454072
Alignment:
Q  473 tcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctggc 572  Q
    ||||||||| |||||||||||||||  | |||||||||||||| |||||||||||||||  | |||| |||||||| |  |||||||||||||| |||||    
T  8453864 tcaagaaaatttcaagaatgacatgacaaaataatcacccttagattttatcaagaaatagtcctgaaattaatgtaacacaataaaatctcagcctggc 8453963  T
Q  573 tggaaatcatggggtggtgggtgttatgtgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaa 672  Q
     |||||| |||| ||||||||||||||||          ||||||| |||||||||||||||||||||||| |||||||| |||| |||||||||||| |    
T  8453964 cggaaattatggtgtggtgggtgttatgtatctttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttga 8454063  T
Q  673 atttttctt 681  Q
    ||| |||||    
T  8454064 attcttctt 8454072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 471 - 704
Target Start/End: Original strand, 14128892 - 14129120
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctg 570  Q
    |||||| |||| || ||||||||||||| |||||||||||||||| |||||||||||||||  |  ||| ||||||||||| |||||||||||||| |      
T  14128892 tatcaataaaattttaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcttgaaattaatgttagccaataaaatctcagcc-- 14128989  T
Q  571 gctggaaatcatggggtggtgggtgttatgtgnnnnnnnnn-atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattct 669  Q
       | ||||||| ||||||||||||||||||           ||||||| |||||||||||||||||||||||| |||||||| |||| |||||||||||    
T  14128990 ---gaaaatcatagggtggtgggtgttatgtattttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattct 14129086  T
Q  670 taaatttttcttgataaaatcattcttgatatcta 704  Q
    | ||| |||||| ||||||||||||||||||||||    
T  14129087 tgaatatttctt-ataaaatcattcttgatatcta 14129120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 471 - 702
Target Start/End: Complemental strand, 39772838 - 39772608
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctg 570  Q
    |||||| |||| |||||||||||||||| |||||||||||||||| |||||||||| ||||  |  ||| ||||||||||| |||||||||||||| |      
T  39772838 tatcaaaaaaatttcaagaatgacatggcagaataatcacccttagattttatcaaaaaatagtcttgaaattaatgttagccaataaaatctcag-cca 39772740  T
Q  571 gctggaaatcatggggtggtgggtgttatgt-gnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattct 669  Q
    || |||||||||||| |||||||||||||||           ||||||| |||||||| || |||||||||||| |||||||| ||||||||||||||||    
T  39772739 gccggaaatcatgggatggtgggtgttatgtattttttttttatgaaagattaataaacgaaactgaaatctaaaggtgattattgtgtcatgtcattct 39772640  T
Q  670 taaatttttcttgataaaatcattcttgatatc 702  Q
    |  || |||||| ||||||||||||||||||||    
T  39772639 tggatctttctt-ataaaatcattcttgatatc 39772608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 475 - 601
Target Start/End: Complemental strand, 7017898 - 7017772
Alignment:
Q  475 aagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctggctg 574  Q
    |||||||||||||||||||||||| |||||||||| ||||| |||||||||||||||| | || | ||||||||||| |||||||||||| ||| ||| |    
T  7017898 aagaaaaattcaagaatgacatggcagaataatcatccttagattttatcaagaaattgtactaaaattaatgttagccaataaaatctctgtcgggccg 7017799  T
Q  575 gaaatcatggggtggtgggtgttatgt 601  Q
    |||||||||||||||||||||||||||    
T  7017798 gaaatcatggggtggtgggtgttatgt 7017772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 486 - 685
Target Start/End: Complemental strand, 41819800 - 41819590
Alignment:
Q  486 aagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctggctggaaatcatggg 585  Q
    |||||||| |||| |||||||||||||||| |||||||||||||||| | |||| ||||||||||| |||||||||||||| | ||| ||||||||||||    
T  41819800 aagaatgatatggcagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttagccaataaaatctcagcccggccggaaatcatggg 41819701  T
Q  586 gtggtgggtgttatg-----------tgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaat 674  Q
    |||||| ||||||||           |          |||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||    
T  41819700 gtggtgtgtgttatgtattttttttttttttttttttatgataggttaataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaat 41819601  T
Q  675 ttttcttgata 685  Q
     ||||||||||    
T  41819600 ctttcttgata 41819590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 471 - 598
Target Start/End: Complemental strand, 27782154 - 27782027
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctg 570  Q
    |||||||||| |||||| |||||||||| |||||||||||||||| |||||||||||||||| |  ||| ||||||||||| ||||||||||| ||||||    
T  27782154 tatcaagaaagattcaataatgacatggcagaataatcacccttagattttatcaagaaattgtcttgaaattaatgttagccaataaaatcttagtctg 27782055  T
Q  571 gctggaaatcatggggtggtgggtgtta 598  Q
    || ||||||||| |||||||||||||||    
T  27782054 gccggaaatcattgggtggtgggtgtta 27782027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 541 - 704
Target Start/End: Complemental strand, 37132643 - 37132484
Alignment:
Q  541 attaatgttagtcaataaaatctcagtctggctggaaatcatggggtggtgggtgttatgtgnnnnnnnnnatgaaaggttaataaatgagactgaaatc 640  Q
    ||||||||||| ||||||||||||||||||  |||||||||||||||||||    ||||||           |||||||||||||||| |||||||||||    
T  37132643 attaatgttagccaataaaatctcagtctgattggaaatcatggggtggtg----ttatgtttttttttttttgaaaggttaataaataagactgaaatc 37132548  T
Q  641 taagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 704  Q
    |||||||||||| ||||||||||||||| | ||| |||||||||||||||||||||||||||||    
T  37132547 taagggtgattattgtgtcatgtcattcatgaatctttcttgataaaatcattcttgatatcta 37132484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 471 - 601
Target Start/End: Complemental strand, 24211590 - 24211460
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctg 570  Q
    ||||||||||| |||||||||| ||||| |||||||||||||||| |||||||||||||||  |  ||| ||||||||||  |||||||||||||| |||    
T  24211590 tatcaagaaaatttcaagaatggcatggcagaataatcacccttaaattttatcaagaaatagtcttgaaattaatgttaaccaataaaatctcagcctg 24211491  T
Q  571 gctggaaatcatggggtggtgggtgttatgt 601  Q
    || ||||||||||||||||||||||||||||    
T  24211490 gccggaaatcatggggtggtgggtgttatgt 24211460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 540 - 704
Target Start/End: Original strand, 30055614 - 30055777
Alignment:
Q  540 tattaatgttagtcaataaaatctcagtctggctggaaatcatggggtggtgggtgttatgtgnnnnnnnnn-atgaaaggttaataaatgagactgaaa 638  Q
    |||||||||||| |||||||||||||| ||||| ||||||||||||||||||| ||||||||           ||||||||||||||||||||||| |||    
T  30055614 tattaatgttagccaataaaatctcag-ctggccggaaatcatggggtggtggatgttatgtattttttttttatgaaaggttaataaatgagactaaaa 30055712  T
Q  639 tctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 704  Q
    |||||||||||||| ||||||||||||||||| ||| |||||| |||||||||||||| |||||||    
T  30055713 tctaagggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatatcta 30055777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 490 - 704
Target Start/End: Original strand, 10044390 - 10044609
Alignment:
Q  490 atgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctggctggaaatcatggggtgg 589  Q
    ||||||||  |||||||||| ||||| |||||||||||||||  || ||  ||||||||||| ||||||||||||| |||||  ||||||||||| ||||    
T  10044390 atgacatgacagaataatcatccttaaattttatcaagaaatagttttggaattaatgttagccaataaaatctcaatctggtcggaaatcatggagtgg 10044489  T
Q  590 tgggtgttatgtgnnnnnnnnn------atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttga 683  Q
    ||| ||||||||                ||||||| ||||||||||||| |||||||||| |||||||| |||| |||||||||||| ||| |||||| |    
T  10044490 tggttgttatgtatttttttttttttttatgaaagattaataaatgagattgaaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-a 10044588  T
Q  684 taaaatcattcttgatatcta 704  Q
    |||||||||||||||||||||    
T  10044589 taaaatcattcttgatatcta 10044609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 475 - 667
Target Start/End: Complemental strand, 27835486 - 27835293
Alignment:
Q  475 aagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctggctg 574  Q
    |||||||||||||||||||||||||| |||||||| ||||| ||||||| || ||||| |  | | ||||||||||| |||||||||||||| || |  |    
T  27835486 aagaaaaattcaagaatgacatggtaaaataatcatccttagattttattaaaaaattgtcttcaaattaatgttagccaataaaatctcagcctagacg 27835387  T
Q  575 gaaatcatggggtggtgggtgttatgt-gnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcatt 667  Q
    ||||||||||| |||||||||||||||           || |||||||||||||||||| |||||||||||| |||||| |||||||| |||||    
T  27835386 gaaatcatgggatggtgggtgttatgtatttttgttttataaaaggttaataaatgagattgaaatctaaggatgattattgtgtcatatcatt 27835293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 458 - 563
Target Start/End: Complemental strand, 15972927 - 15972822
Alignment:
Q  458 gagcaatgatatatatcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaata 557  Q
    |||||||| |||||||||||||| ||| ||||||||||||  |||||||||||||||| |||||||||||||||| ||||||  |||||||||| |||||    
T  15972927 gagcaatgctatatatcaagaaagattgaagaatgacatgacagaataatcacccttagattttatcaagaaattgttctgaatttaatgttagccaata 15972828  T
Q  558 aaatct 563  Q
    ||||||    
T  15972827 aaatct 15972822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 556 - 704
Target Start/End: Original strand, 38017047 - 38017194
Alignment:
Q  556 taaaatctcagtctggctggaaatcatggggtggtgggtgttatgtgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggt-gattact 654  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||||           |||||| |||||||||||||||||||||||| |||  |||| |    
T  38017047 taaaatctcagcctggccggaaatcatggggtggtgggtgttatgtattttttttt-tgaaagattaataaatgagactgaaatctaaaggtaaattatt 38017145  T
Q  655 gtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 704  Q
    |||||||||||||||| ||| |||||| ||||||||||||||||||||||    
T  38017146 gtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatcta 38017194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 620 - 704
Target Start/End: Complemental strand, 1503730 - 1503647
Alignment:
Q  620 ttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 704  Q
    |||||||||||||||||||||||| |||||||| |||| |||||||||||| |||||||||| ||||||||||||||||||||||    
T  1503730 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatcta 1503647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 612 - 704
Target Start/End: Complemental strand, 24211267 - 24211176
Alignment:
Q  612 atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 704  Q
    ||||||| |||||||||||||||||||||||| |||||||| |||| ||||||||||||  || |||||| ||||||||||||||||||||||    
T  24211267 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttggatctttctt-ataaaatcattcttgatatcta 24211176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 622 - 704
Target Start/End: Complemental strand, 7017743 - 7017662
Alignment:
Q  622 aataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 704  Q
    |||||||||||||||||||||||| |||||| | |   ||||||||||||||| ||||||||| |||||||||||||||||||    
T  7017743 aataaatgagactgaaatctaaggatgattattataaaatgtcattcttaaatatttcttgat-aaatcattcttgatatcta 7017662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 461 - 524
Target Start/End: Complemental strand, 3817977 - 3817914
Alignment:
Q  461 caatgatatatatcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatc 524  Q
    ||||| ||||||||||||||||||||||||| |||||  |||||||||||||||| ||||||||    
T  3817977 caatgctatatatcaagaaaaattcaagaattacatgacagaataatcacccttagattttatc 3817914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 636 - 701
Target Start/End: Original strand, 1645953 - 1646018
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    ||||||||||||||||| | || |||||| |||||||| |||||||||||||||| ||||||||||    
T  1645953 aaatctaagggtgattattctgccatgtctttcttaaaattttcttgataaaatctttcttgatat 1646018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 636 - 701
Target Start/End: Complemental strand, 8453911 - 8453846
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    ||||||||||||||||| | ||||||||||||||| || ||||||||| |||||| ||||||||||    
T  8453911 aaatctaagggtgattattttgtcatgtcattcttgaaattttcttgaaaaaatctttcttgatat 8453846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 636 - 701
Target Start/End: Complemental strand, 14128941 - 14128876
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    ||||||||||||||||| | || ||||||||||||||| |||| ||||||||||| ||||||||||    
T  14128941 aaatctaagggtgattattctgccatgtcattcttaaaattttattgataaaatctttcttgatat 14128876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 636 - 701
Target Start/End: Original strand, 26042104 - 26042169
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    ||||||||||||||||| | ||||||||||||||| || |||||||||||||||| ||||| ||||    
T  26042104 aaatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttaatat 26042169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 636 - 701
Target Start/End: Complemental strand, 32064822 - 32064757
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    ||||||||||||||||| | || |||||||||||| || |||||||||||||||| ||||||||||    
T  32064822 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 32064757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 636 - 701
Target Start/End: Complemental strand, 32393935 - 32393870
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    |||| |||||||||||| | || ||||||||||||||| |||||||||||||||| ||||||||||    
T  32393935 aaatttaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatat 32393870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 636 - 701
Target Start/End: Complemental strand, 34665459 - 34665394
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    ||||||||||||||||| | || |||||||||||| || |||||||||||||||| ||||||||||    
T  34665459 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 34665394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 636 - 701
Target Start/End: Complemental strand, 35353118 - 35353053
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    ||||||||||||||||| | || ||||||||||||||| ||||||||| |||||| ||||||||||    
T  35353118 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatat 35353053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 636 - 701
Target Start/End: Original strand, 37986043 - 37986108
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    ||||||||||||||||| | || ||||||||||||||| |||| ||||||||||| ||||||||||    
T  37986043 aaatctaagggtgattattctgccatgtcattcttaaaatttttttgataaaatctttcttgatat 37986108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 636 - 701
Target Start/End: Original strand, 42755030 - 42755095
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    ||||||||||||||||| | || |||||||||||| || |||||||||||||||| ||||||||||    
T  42755030 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 42755095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 636 - 701
Target Start/End: Original strand, 6108221 - 6108286
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    ||||||||||||||||| | || ||||||||||||||| ||||||| | |||||| ||||||||||    
T  6108221 aaatctaagggtgattattctgccatgtcattcttaaaattttcttaaaaaaatctttcttgatat 6108286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 636 - 701
Target Start/End: Complemental strand, 7022055 - 7021990
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    ||||||||||||||||| | || ||| |||||||| |||||||||||| |||||| ||||||||||    
T  7022055 aaatctaagggtgattattctgccatatcattcttgaatttttcttgagaaaatctttcttgatat 7021990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 636 - 701
Target Start/End: Original strand, 17841838 - 17841903
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    ||||||||||||||||| | || |||||||||||| || ||||||||| |||||| ||||||||||    
T  17841838 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatat 17841903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 636 - 701
Target Start/End: Original strand, 20091789 - 20091854
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    ||||||||||||||||| | || |||||||||||| || |||||||||||||||  ||||||||||    
T  20091789 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatatttcttgatat 20091854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 636 - 701
Target Start/End: Original strand, 24844847 - 24844911
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    ||||||||||||||||| | ||||||||||||||| |||||||||| |||||||  ||||||||||    
T  24844847 aaatctaagggtgattatt-tgtcatgtcattcttgaatttttcttaataaaatatttcttgatat 24844911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 636 - 701
Target Start/End: Original strand, 31347770 - 31347835
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    ||||||||||||||||| | || |||||||||||| |||||||||||| |||||  ||||||||||    
T  31347770 aaatctaagggtgattattctgccatgtcattcttgaatttttcttgagaaaatatttcttgatat 31347835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 636 - 701
Target Start/End: Original strand, 40780117 - 40780182
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    ||||||||||||||||| | || |||||||||||| || ||||||||| |||||| ||||||||||    
T  40780117 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatat 40780182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 637 - 701
Target Start/End: Complemental strand, 38017047 - 38016983
Alignment:
Q  637 aatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    |||| ||||||||||| | || |||||||||||| || |||||||||||||||| ||||||||||    
T  38017047 aatccaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 38016983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 471 - 514
Target Start/End: Original strand, 38016999 - 38017042
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcaccctt 514  Q
    ||||||||||| |||||||||||||||| |||||||||||||||    
T  38016999 tatcaagaaaatttcaagaatgacatggcagaataatcaccctt 38017042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 636 - 685
Target Start/End: Original strand, 3817918 - 3817967
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgata 685  Q
    ||||||||||||||||| | |||||||| |||||| ||||||||||||||    
T  3817918 aaatctaagggtgattattctgtcatgtaattcttgaatttttcttgata 3817967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 636 - 701
Target Start/End: Complemental strand, 15187637 - 15187572
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    |||||||||||| |||| | || ||| |||||||| || |||||||||||||||| ||||||||||    
T  15187637 aaatctaagggtaattattctgccatatcattcttgaaattttcttgataaaatctttcttgatat 15187572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 636 - 685
Target Start/End: Original strand, 15972865 - 15972914
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgata 685  Q
    ||||||||||||||||| | ||||||||||||||| ||| ||||||||||    
T  15972865 aaatctaagggtgattattctgtcatgtcattcttcaatctttcttgata 15972914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 636 - 701
Target Start/End: Original strand, 24211541 - 24211606
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    |||| |||||||||||| | || |||| ||||||| || |||||||||||||||| ||||||||||    
T  24211541 aaatttaagggtgattattctgccatgccattcttgaaattttcttgataaaatctttcttgatat 24211606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 636 - 701
Target Start/End: Original strand, 27782105 - 27782170
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    ||||||||||||||||| | || ||||||||| || ||| ||||||||||||||  ||||||||||    
T  27782105 aaatctaagggtgattattctgccatgtcattattgaatctttcttgataaaatatttcttgatat 27782170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 471 - 516
Target Start/End: Complemental strand, 37132695 - 37132650
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttat 516  Q
    |||||||||||||| ||||||||||||| |||||||||| ||||||    
T  37132695 tatcaagaaaaatttaagaatgacatggcagaataatcatccttat 37132650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 703 - 744
Target Start/End: Complemental strand, 38125659 - 38125618
Alignment:
Q  703 tactccctctgtccctatatgtaagcacctttttattagagg 744  Q
    ||||||||| ||||||||||||||||||| ||||||||||||    
T  38125659 tactccctccgtccctatatgtaagcacccttttattagagg 38125618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 636 - 701
Target Start/End: Original strand, 39772789 - 39772854
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    ||||||||||||||||| | || |||||||||||| || |||| ||||||||||  ||||||||||    
T  39772789 aaatctaagggtgattattctgccatgtcattcttgaaatttttttgataaaatatttcttgatat 39772854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 636 - 701
Target Start/End: Original strand, 41819766 - 41819831
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    ||||||||||||||||| | || ||| |||||||||||   |||||||||||||| ||||||||||    
T  41819766 aaatctaagggtgattattctgccatatcattcttaaaacattcttgataaaatctttcttgatat 41819831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 641 - 689
Target Start/End: Original strand, 37132651 - 37132699
Alignment:
Q  641 taagggtgattactgtgtcatgtcattcttaaatttttcttgataaaat 689  Q
    ||||| |||||| | || |||||||||||||||||||||||||||||||    
T  37132651 taaggatgattattctgccatgtcattcttaaatttttcttgataaaat 37132699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 662 - 701
Target Start/End: Original strand, 1886633 - 1886672
Alignment:
Q  662 gtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    ||||||||| ||| ||||||||||||||||||||||||||    
T  1886633 gtcattcttgaatctttcttgataaaatcattcttgatat 1886672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 471 - 522
Target Start/End: Original strand, 3890437 - 3890488
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatatttta 522  Q
    |||||||||| |||||||||||| |||| |||||||||||| ||| ||||||    
T  3890437 tatcaagaaagattcaagaatgatatggcagaataatcaccattagatttta 3890488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 475 - 522
Target Start/End: Complemental strand, 35353280 - 35353233
Alignment:
Q  475 aagaaaaattcaagaatgacatggtagaataatcacccttatatttta 522  Q
    |||||||||||||||||||||||| | |||||||||| ||| ||||||    
T  35353280 aagaaaaattcaagaatgacatggcacaataatcacctttaaatttta 35353233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 470 - 520
Target Start/End: Original strand, 41819589 - 41819639
Alignment:
Q  470 atatcaagaaaaattcaagaatgacatggtagaataatcacccttatattt 520  Q
    ||||||||||| ||||||||||||||||  | |||||||||||||| ||||    
T  41819589 atatcaagaaagattcaagaatgacatgacacaataatcacccttagattt 41819639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 475 - 520
Target Start/End: Original strand, 1503669 - 1503714
Alignment:
Q  475 aagaaaaattcaagaatgacatggtagaataatcacccttatattt 520  Q
    |||||||||||||||||||||||| | |||||||||| ||| ||||    
T  1503669 aagaaaaattcaagaatgacatggcacaataatcacctttagattt 1503714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 636 - 701
Target Start/End: Original strand, 7017853 - 7017918
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    |||||||||| |||||| | || |||||||||||| |||||||||| | |||||| ||| ||||||    
T  7017853 aaatctaaggatgattattctgccatgtcattcttgaatttttcttaagaaaatctttcatgatat 7017918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 475 - 520
Target Start/End: Original strand, 17841676 - 17841721
Alignment:
Q  475 aagaaaaattcaagaatgacatggtagaataatcacccttatattt 520  Q
    |||||||||||||||||||||||| | |||||||||| ||| ||||    
T  17841676 aagaaaaattcaagaatgacatggcacaataatcacctttagattt 17841721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 475 - 520
Target Start/End: Original strand, 20091627 - 20091672
Alignment:
Q  475 aagaaaaattcaagaatgacatggtagaataatcacccttatattt 520  Q
    |||||| ||||||||||||||||| | |||||||||||||| ||||    
T  20091627 aagaaagattcaagaatgacatggcacaataatcacccttagattt 20091672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 475 - 520
Target Start/End: Original strand, 26041939 - 26041984
Alignment:
Q  475 aagaaaaattcaagaatgacatggtagaataatcacccttatattt 520  Q
    |||||||||||||||||||||||| | |||||||||| ||| ||||    
T  26041939 aagaaaaattcaagaatgacatggcacaataatcacctttagattt 26041984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 636 - 701
Target Start/End: Original strand, 30835035 - 30835099
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    ||||| ||||||||||| | || |||||||||||| ||||||| | ||||||||| ||||||||||    
T  30835035 aaatcaaagggtgattattctgccatgtcattcttgaattttt-tcgataaaatctttcttgatat 30835099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 471 - 520
Target Start/End: Original strand, 31347598 - 31347647
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatattt 520  Q
    |||||||||| ||||||||||||||||| | |||||||||| ||| ||||    
T  31347598 tatcaagaaagattcaagaatgacatggcacaataatcacctttagattt 31347647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 475 - 520
Target Start/End: Complemental strand, 34665620 - 34665575
Alignment:
Q  475 aagaaaaattcaagaatgacatggtagaataatcacccttatattt 520  Q
    |||||| ||||||||||||||||| | |||||||||||||| ||||    
T  34665620 aagaaagattcaagaatgacatggcacaataatcacccttagattt 34665575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #79
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 475 - 520
Target Start/End: Original strand, 40779955 - 40780000
Alignment:
Q  475 aagaaaaattcaagaatgacatggtagaataatcacccttatattt 520  Q
    |||||||||||||||||||||||| | |||||||||| ||| ||||    
T  40779955 aagaaaaattcaagaatgacatggcacaataatcacctttagattt 40780000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #80
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 475 - 520
Target Start/End: Original strand, 42754868 - 42754913
Alignment:
Q  475 aagaaaaattcaagaatgacatggtagaataatcacccttatattt 520  Q
    |||||||||| ||||||||||||||| |||||||||| ||| ||||    
T  42754868 aagaaaaatttaagaatgacatggtacaataatcacctttagattt 42754913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 127; Significance: 4e-65; HSPs: 43)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 127; E-Value: 4e-65
Query Start/End: Original strand, 471 - 704
Target Start/End: Complemental strand, 17705502 - 17705273
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctg 570  Q
    ||||||||||| || ||||||||||||  |||||||||||||||| |||||||||||||||| | |||| ||||||||||| ||||||||||||||||||    
T  17705502 tatcaagaaaattttaagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttagccaataaaatctcagtctg 17705403  T
Q  571 gctggaaatcatggggtggtgggtgttatgtgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattctt 670  Q
    || |||||||||||| |||||||||||||||          |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||    
T  17705402 gccggaaatcatgggatggtgggtgttatgt--aattttttatgaaaggttaataaatgagactgaaatctaa-ggtgattattgtgtcatgtcattctt 17705306  T
Q  671 aaatttttcttgataaaatcattcttgatatcta 704  Q
     ||| |||||| ||||||||||||||||||||||    
T  17705305 gaatctttctt-ataaaatcattcttgatatcta 17705273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 126; E-Value: 2e-64
Query Start/End: Original strand, 471 - 704
Target Start/End: Original strand, 33696724 - 33696958
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctg 570  Q
    ||||||||||| |||||||||||||||| |||||||||||||||| |||||||||||||||  | |||| ||||||||||| |||||||||||||| |||    
T  33696724 tatcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttagccaataaaatctcagcctg 33696823  T
Q  571 gctggaaatcatggggtggtgggtgttatgt--gnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattc 668  Q
    || ||||||||||||||||||||||||||||            ||||||| |||||||||||||||||||||||| |||||||| |||| ||||||||||    
T  33696824 gccggaaatcatggggtggtgggtgttatgtaattttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattc 33696923  T
Q  669 ttaaatttttcttgataaaatcattcttgatatcta 704  Q
    |||||| |||||| ||||||||||||||||||||||    
T  33696924 ttaaatctttctt-ataaaatcattcttgatatcta 33696958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 124; E-Value: 3e-63
Query Start/End: Original strand, 471 - 704
Target Start/End: Original strand, 28675176 - 28675409
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctg 570  Q
    ||||||||||| |||||||||||||||   ||||||||||||||| |||||||||||||||| | |||| |||||||||||  ||||||||||||| |||    
T  28675176 tatcaagaaaatttcaagaatgacatgtcggaataatcacccttagattttatcaagaaattgtcctgaaattaatgttagctaataaaatctcagcctg 28675275  T
Q  571 gctggaaatcatggggtggtgggtgttatgt-gnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattct 669  Q
    || |||||||||||||||||||| |||||||           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  28675276 gccggaaatcatggggtggtgggggttatgtattttttatttatgaaaggttaataaatgagactgaaatctaagggtgattattgtgtcatgtcattct 28675375  T
Q  670 taaatttttcttgataaaatcattcttgatatcta 704  Q
    | ||| |||||| ||||||||||||||||||||||    
T  28675376 tgaatctttctt-ataaaatcattcttgatatcta 28675409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 122; E-Value: 4e-62
Query Start/End: Original strand, 471 - 704
Target Start/End: Complemental strand, 33695364 - 33695130
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctg 570  Q
    ||||||||||| |||||||||||||||| |||||||||||||||| |||||||||||||||  | |||| ||||||||||| |||||||||||||| |||    
T  33695364 tatcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttagccaataaaatctcagcctg 33695265  T
Q  571 gctggaaatcatggggtggtgggtgttatgt--gnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattc 668  Q
    || ||||||||||||||||||||||||||||            ||||||| |||||||||||||||||||||||| |||||||| |||| ||| ||||||    
T  33695264 gccggaaatcatggggtggtgggtgttatgtaattttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatatcattc 33695165  T
Q  669 ttaaatttttcttgataaaatcattcttgatatcta 704  Q
    |||||| |||||| ||||||||||||||||||||||    
T  33695164 ttaaatatttctt-ataaaatcattcttgatatcta 33695130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 471 - 704
Target Start/End: Complemental strand, 17176058 - 17175825
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctg 570  Q
    |||||| |||| |||||||||||||||  |||||||||||||||| ||||||||||||||| ||  ||| ||||||||||| |||||||||||||| |||    
T  17176058 tatcaataaaatttcaagaatgacatgacagaataatcacccttagattttatcaagaaataatcatgaaattaatgttagccaataaaatctcagcctg 17175959  T
Q  571 gctggaaatcatggggtggtgggtgttatgt-gnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattct 669  Q
    || ||||||||||||||||||||||||||||           ||||||| |||||||||||||||||||||||| |||||||| |||  |||||||||||    
T  17175958 gccggaaatcatggggtggtgggtgttatgtattttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtaccatgtcattct 17175859  T
Q  670 taaatttttcttgataaaatcattcttgatatcta 704  Q
    | ||| |||||| ||||||||||||||||||||||    
T  17175858 tgaatctttctt-ataaaatcattcttgatatcta 17175825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 473 - 704
Target Start/End: Complemental strand, 11548623 - 11548393
Alignment:
Q  473 tcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctggc 572  Q
    |||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| | |||||||||||||||| |||||||||||| ||| |||    
T  11548623 tcaagaaaaattcaagaatgacatggcagaataatcacccttagattttatcaagaaattgtactgatattaatgttagccaataaaatctctgtcgggc 11548524  T
Q  573 tggaaatcatggggtggtgggtgttatg---tgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattct 669  Q
     |||||||||||||| ||||||||||||   |          ||||||||  ||||||||||||||||||||||||||||||| |||| |||||||||||    
T  11548523 cggaaatcatggggt-gtgggtgttatgtatttttcttttttatgaaagg--aataaatgagactgaaatctaagggtgattattgtgccatgtcattct 11548427  T
Q  670 taaatttttcttgataaaatcattcttgatatcta 704  Q
    | |||  |||||||| |||||||||||||||||||    
T  11548426 tgaatcgttcttgat-aaatcattcttgatatcta 11548393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 471 - 704
Target Start/End: Complemental strand, 18365610 - 18365378
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctg 570  Q
    |||||| |||| |||||||||||||||| |||||||||||||||| |||||||||||||||  |  ||| ||||||||||| |||||||||||||  |||    
T  18365610 tatcaaaaaaatttcaagaatgacatggcagaataatcacccttaaattttatcaagaaatagtcttgaaattaatgttagccaataaaatctcatcctg 18365511  T
Q  571 gctggaaatcatggggtggtgggtgttatgtgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattctt 670  Q
    || |||||||||||||| |||||||||||||          ||||||| |||||||||||||||||||||||| |||||||| ||||  |||||||||||    
T  18365510 gccggaaatcatggggtagtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgctatgtcattctt 18365411  T
Q  671 aaatttttcttgataaaatcattcttgatatcta 704  Q
      || |||||| ||||||||||||||||||||||    
T  18365410 ggatctttctt-ataaaatcattcttgatatcta 18365378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 471 - 704
Target Start/End: Complemental strand, 18370874 - 18370642
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctg 570  Q
    |||||| |||| |||||||||||||||| |||||||||||||||| |||||||||||||||  |  ||| ||||||||||| |||||||||||||  |||    
T  18370874 tatcaaaaaaatttcaagaatgacatggcagaataatcacccttaaattttatcaagaaatagtcttgaaattaatgttagccaataaaatctcatcctg 18370775  T
Q  571 gctggaaatcatggggtggtgggtgttatgtgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattctt 670  Q
    || |||||||||||||| |||||||||||||          ||||||| |||||||||||||||||||||||| |||||||| ||||  |||||||||||    
T  18370774 gccggaaatcatggggtagtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgctatgtcattctt 18370675  T
Q  671 aaatttttcttgataaaatcattcttgatatcta 704  Q
      || |||||| ||||||||||||||||||||||    
T  18370674 ggatctttctt-ataaaatcattcttgatatcta 18370642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 105; E-Value: 6e-52
Query Start/End: Original strand, 486 - 704
Target Start/End: Complemental strand, 2309445 - 2309227
Alignment:
Q  486 aagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctggctggaaatcatggg 585  Q
    ||||||| ||||| |||||||||||||||| |||||||||||||||| | |||| ||||||||||| ||||||||||||||  |||| ||||||||||||    
T  2309445 aagaatggcatggcagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttagccaataaaatctcagcttggccggaaatcatggg 2309346  T
Q  586 gtggtgggtgttatgt-gnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgat 684  Q
    || |||||||||||||           ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| ||| |||||| ||    
T  2309345 gttgtgggtgttatgtattttttttttatgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttctt-at 2309247  T
Q  685 aaaatcattcttgatatcta 704  Q
    ||||||||  ||||||||||    
T  2309246 aaaatcatcgttgatatcta 2309227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 102; E-Value: 4e-50
Query Start/End: Original strand, 477 - 704
Target Start/End: Original strand, 32702239 - 32702466
Alignment:
Q  477 gaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctggctgga 576  Q
    ||||| ||||||||||| |||| |||||||||||||||| |||||||||||||||  | |||| |||||| |||  ||||||||||| ||||| || |||    
T  32702239 gaaaatttcaagaatgatatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatattaaccaataaaatctgagtctagccgga 32702338  T
Q  577 aatcatggggtggtgggtgttatgt-gnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatt 675  Q
    |||||||||||||||||| ||||||           ||||||| |||||||||||||||||||||||| ||| |||| ||||||||||||||||| ||||    
T  32702339 aatcatggggtggtgggtcttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtaattattgtgtcatgtcattcttgaatt 32702438  T
Q  676 tttcttgataaaatcattcttgatatcta 704  Q
    |||||| ||||||||||||||||||||||    
T  32702439 tttctt-ataaaatcattcttgatatcta 32702466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 98; E-Value: 9e-48
Query Start/End: Original strand, 471 - 643
Target Start/End: Complemental strand, 9752282 - 9752110
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctg 570  Q
    ||||||||||||||||||||||| |||| |||||||||||||||| ||||||| |||||||| | |||| ||||||||||| |||||||||||||| |||    
T  9752282 tatcaagaaaaattcaagaatgatatggcagaataatcacccttagattttattaagaaattgtcctgaaattaatgttagccaataaaatctcagcctg 9752183  T
Q  571 gctggaaatcatggggtggtgggtgttatgtgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaa 643  Q
    || ||||||||||||||| ||||||||||||          ||||||||||||||||||||||||||||||||    
T  9752182 gccggaaatcatggggtgatgggtgttatgtatttttttttatgaaaggttaataaatgagactgaaatctaa 9752110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 471 - 704
Target Start/End: Complemental strand, 23291121 - 23290885
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctg 570  Q
    ||||||||||| || ||||||||||||| |||||||||||||||| |||||||||||||||  |||||| ||||||||||  |||||||||||||| |||    
T  23291121 tatcaagaaaattttaagaatgacatggcagaataatcacccttagattttatcaagaaatagttctgaaattaatgttaaccaataaaatctcagcctg 23291022  T
Q  571 gctggaaatcatggggtggtgggtgttatg----tgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcat 666  Q
    ||  |||||||||||||| |||||||||||    |          ||||||| |||||||||||||||||||||||| ||| |||| |||| ||| ||||    
T  23291021 gccagaaatcatggggtgatgggtgttatgtattttcttttttttatgaaagattaataaatgagactgaaatctaaaggtaattattgtgccatatcat 23290922  T
Q  667 tcttaaatttttcttgataaaatcattcttgatatcta 704  Q
    |||| ||| |||||| ||||||||||| ||||||||||    
T  23290921 tcttgaatctttctt-ataaaatcatttttgatatcta 23290885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 472 - 702
Target Start/End: Complemental strand, 6031777 - 6031546
Alignment:
Q  472 atcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctgg 571  Q
    ||||| |||| || ||||||||||||  |||||||||||||||| |||||||||||||||  |  ||| ||||||||||  |||||||||| ||| ||||    
T  6031777 atcaataaaattttaagaatgacatgacagaataatcacccttaaattttatcaagaaatagtcttgaaattaatgttaaccaataaaatcccagcctgg 6031678  T
Q  572 ctggaaatcatggggtggtgggtgttatg--tgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattct 669  Q
    | |||||||||||||||||||||||||||  |          || |||| |||||||||||||||||||||||| |||||||| |||| |||||||||||    
T  6031677 ccggaaatcatggggtggtgggtgttatgtatttttttttttataaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattct 6031578  T
Q  670 taaatttttcttgataaaatcattcttgatatc 702  Q
    ||||| ||| || ||||||||||||||||||||    
T  6031577 taaatcttt-tttataaaatcattcttgatatc 6031546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 475 - 601
Target Start/End: Original strand, 25986962 - 25987088
Alignment:
Q  475 aagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctggctg 574  Q
    ||||||| |||||||||||||||| | ||||||||| |||| |||||||||||||||  | |||| ||||||||||  |||||||||||||||||||| |    
T  25986962 aagaaaatttcaagaatgacatggcaaaataatcactcttaaattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagtctggccg 25987061  T
Q  575 gaaatcatggggtggtgggtgttatgt 601  Q
    |||||||||||||||||||||||||||    
T  25987062 gaaatcatggggtggtgggtgttatgt 25987088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 471 - 670
Target Start/End: Original strand, 6127303 - 6127505
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctg-atattaatgttagtcaataaaatctcagtct 569  Q
    ||||||||||| || ||||||||||||| |||||||||||||||| |||||||||||||||  |  || | ||||||||||| ||||||||| ||||| |    
T  6127303 tatcaagaaaattttaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcttgaaaattaatgttagccaataaaatatcagttt 6127402  T
Q  570 ggctggaaatcatggggtggtgggtgttatg--tgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcatt 667  Q
    |||  ||||||||||||||||||||||||||  |          ||||||| ||||||||||||||||||||||||  ||||||| |||| |||||||||    
T  6127403 ggccagaaatcatggggtggtgggtgttatgtatttttttttatatgaaagattaataaatgagactgaaatctaaaagtgattattgtgccatgtcatt 6127502  T
Q  668 ctt 670  Q
    |||    
T  6127503 ctt 6127505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 471 - 674
Target Start/End: Complemental strand, 8515762 - 8515560
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctg 570  Q
    |||||||| | ||| ||||||||||||| |||||||||||  ||  |||||||||||||||| | | || ||||||||||| |||||||||||||| |||    
T  8515762 tatcaagacagatttaagaatgacatggcagaataatcacatttg-attttatcaagaaattgtcccgaaattaatgttagccaataaaatctcagcctg 8515664  T
Q  571 gctggaaatcatggggtggtgggtgttatgtgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattctt 670  Q
       ||||||||||||||||||| ||||||||          |||||| |||||||||| ||||||||||||||| ||||||| | |  ||||||||| ||    
T  8515663 atcggaaatcatggggtggtggatgttatgtatttttttttatgaaatgttaataaataagactgaaatctaagagtgattattctaccatgtcattttt 8515564  T
Q  671 aaat 674  Q
    ||||    
T  8515563 aaat 8515560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 612 - 704
Target Start/End: Original strand, 29693615 - 29693707
Alignment:
Q  612 atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 704  Q
    |||||||| |||||||| |||||||||||||||||| |||| | || |||||||||||||||| |||||||||||||||||||||||||||||    
T  29693615 atgaaaggataataaataagactgaaatctaagggtcattattctgccatgtcattcttaaatctttcttgataaaatcattcttgatatcta 29693707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 554 - 685
Target Start/End: Complemental strand, 18889597 - 18889466
Alignment:
Q  554 aataaaatctcagtctggctggaaatcatggggtggtgggtgttatgtgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattac 653  Q
    ||||||||||||| || || ||||||||||||||||||||| ||||||          ||||||| |||||||||||||||||||||||| ||||||||     
T  18889597 aataaaatctcagccttgccggaaatcatggggtggtgggttttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgattat 18889498  T
Q  654 tgtgtcatgtcattcttaaatttttcttgata 685  Q
    |||| |||||||||||| |||  |||||||||    
T  18889497 tgtgccatgtcattcttgaatcattcttgata 18889466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 636 - 701
Target Start/End: Original strand, 17705453 - 17705518
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    ||||||||||||||||| | |||||||||||||||||| |||||||||||||||| ||||||||||    
T  17705453 aaatctaagggtgattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatat 17705518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 636 - 701
Target Start/End: Complemental strand, 6127352 - 6127287
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    ||||||||||||||||| | || ||||||||||||||| |||||||||||||||| ||||||||||    
T  6127352 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatat 6127287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 636 - 701
Target Start/End: Original strand, 23291072 - 23291137
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    ||||||||||||||||| | || ||||||||||||||| |||||||||||||||| ||||||||||    
T  23291072 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatat 23291137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 636 - 701
Target Start/End: Original strand, 17176009 - 17176074
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    ||||||||||||||||| | ||||||||||||||| || |||| ||||||||||| ||||||||||    
T  17176009 aaatctaagggtgattattctgtcatgtcattcttgaaattttattgataaaatctttcttgatat 17176074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 636 - 701
Target Start/End: Original strand, 33695315 - 33695380
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    ||||||||||||||||| | || |||||||||||| || |||||||||||||||| ||||||||||    
T  33695315 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 33695380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 636 - 701
Target Start/End: Complemental strand, 33696773 - 33696708
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    ||||||||||||||||| | || |||||||||||| || |||||||||||||||| ||||||||||    
T  33696773 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 33696708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 634 - 704
Target Start/End: Complemental strand, 582602 - 582531
Alignment:
Q  634 tgaaatctaagggtgattactgtgtc-atgtcattcttaaatttttcttgataaaatcattcttgatatcta 704  Q
    |||||||||| |||||||| | || | || ||||||||||||||||||| ||||||||||||||||||||||    
T  582602 tgaaatctaatggtgattattctgcccatatcattcttaaatttttcttaataaaatcattcttgatatcta 582531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 547 - 601
Target Start/End: Original strand, 29693542 - 29693596
Alignment:
Q  547 gttagtcaataaaatctcagtctggctggaaatcatggggtggtgggtgttatgt 601  Q
    ||||| |||||||||||||| ||||| ||||||||||||||||||| ||||||||    
T  29693542 gttagccaataaaatctcagcctggccggaaatcatggggtggtggatgttatgt 29693596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 646 - 704
Target Start/End: Complemental strand, 34238948 - 34238891
Alignment:
Q  646 gtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 704  Q
    ||||||| ||||||||||||||||| ||| || ||||||||||||||||||||||||||    
T  34238948 gtgattattgtgtcatgtcattcttgaatctt-cttgataaaatcattcttgatatcta 34238891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 636 - 701
Target Start/End: Original strand, 6031729 - 6031794
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    |||| |||||||||||| | |||||||||||||||||| |||| ||||| ||||| ||||||||||    
T  6031729 aaatttaagggtgattattctgtcatgtcattcttaaaattttattgatgaaatctttcttgatat 6031794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 636 - 701
Target Start/End: Original strand, 11548576 - 11548641
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    ||||||||||||||||| | || |||||||||||| |||||||||||| |||||  ||||||||||    
T  11548576 aaatctaagggtgattattctgccatgtcattcttgaatttttcttgagaaaatttttcttgatat 11548641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 636 - 701
Target Start/End: Complemental strand, 28675225 - 28675160
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    ||||||||||||||||| |  | |||||||||||| || |||||||||||||||| ||||||||||    
T  28675225 aaatctaagggtgattattccgacatgtcattcttgaaattttcttgataaaatctttcttgatat 28675160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 471 - 522
Target Start/End: Complemental strand, 18889734 - 18889683
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatatttta 522  Q
    ||||||||||| |||||||||||||||| |||||||| ||||||| ||||||    
T  18889734 tatcaagaaaatttcaagaatgacatggcagaataataacccttagatttta 18889683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 636 - 701
Target Start/End: Original strand, 18365561 - 18365626
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    |||| |||||||||||| | || |||||||||||| || |||| ||||||||||| ||||||||||    
T  18365561 aaatttaagggtgattattctgccatgtcattcttgaaatttttttgataaaatctttcttgatat 18365626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 636 - 701
Target Start/End: Original strand, 18370825 - 18370890
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    |||| |||||||||||| | || |||||||||||| || |||| ||||||||||| ||||||||||    
T  18370825 aaatttaagggtgattattctgccatgtcattcttgaaatttttttgataaaatctttcttgatat 18370890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 646 - 701
Target Start/End: Original strand, 8515723 - 8515778
Alignment:
Q  646 gtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    ||||||| | || |||||||||||||||| | ||||||||||||| ||||||||||    
T  8515723 gtgattattctgccatgtcattcttaaatctgtcttgataaaatctttcttgatat 8515778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 462 - 509
Target Start/End: Original strand, 29693469 - 29693516
Alignment:
Q  462 aatgatatatatcaagaaaaattcaagaatgacatggtagaataatca 509  Q
    |||| |||||||||||||| ||||||||||||||||  ||||||||||    
T  29693469 aatgctatatatcaagaaatattcaagaatgacatgacagaataatca 29693516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 636 - 686
Target Start/End: Original strand, 9752233 - 9752283
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataa 686  Q
    ||||||||||||||||| | || ||| |||||||| |||||||||||||||    
T  9752233 aaatctaagggtgattattctgccatatcattcttgaatttttcttgataa 9752283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 475 - 520
Target Start/End: Original strand, 2309249 - 2309294
Alignment:
Q  475 aagaaaaattcaagaatgacatggtagaataatcacccttatattt 520  Q
    |||||| ||||||||||||||||| | |||||||||||||| ||||    
T  2309249 aagaaagattcaagaatgacatggcacaataatcacccttagattt 2309294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 471 - 520
Target Start/End: Original strand, 11548411 - 11548460
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatattt 520  Q
    |||||||||  ||||||||||||||||| | |||||||||||||| ||||    
T  11548411 tatcaagaacgattcaagaatgacatggcacaataatcacccttagattt 11548460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 475 - 520
Target Start/End: Original strand, 17175847 - 17175892
Alignment:
Q  475 aagaaaaattcaagaatgacatggtagaataatcacccttatattt 520  Q
    |||||| ||||||||||||||||||| |||||||||| ||| ||||    
T  17175847 aagaaagattcaagaatgacatggtacaataatcacctttagattt 17175892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 636 - 701
Target Start/End: Original strand, 18889685 - 18889749
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    |||||||||||| |||| | || |||||||||||| || |||||||||| ||||| ||||||||||    
T  18889685 aaatctaagggttattattctgccatgtcattcttgaaattttcttgat-aaatctttcttgatat 18889749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 636 - 701
Target Start/End: Complemental strand, 25987007 - 25986942
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    |||| |||| ||||||| | || |||||||||||| || ||||||| |||||||| ||||||||||    
T  25987007 aaatttaagagtgattattttgccatgtcattcttgaaattttcttaataaaatctttcttgatat 25986942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 471 - 520
Target Start/End: Complemental strand, 29693688 - 29693639
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatattt 520  Q
    |||||||||| ||| ||||||||||||| |||||||| ||||||| ||||    
T  29693688 tatcaagaaagatttaagaatgacatggcagaataatgacccttagattt 29693639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 636 - 701
Target Start/End: Complemental strand, 32702282 - 32702217
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    ||||||||||||||||| | || ||| |||||||| || ||||| ||| |||||| ||||||||||    
T  32702282 aaatctaagggtgattattctgccatatcattcttgaaattttcatgaaaaaatctttcttgatat 32702217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 127; Significance: 4e-65; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 127; E-Value: 4e-65
Query Start/End: Original strand, 471 - 704
Target Start/End: Complemental strand, 6043548 - 6043316
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctg 570  Q
    ||||||||||| |||||||||||||||| |||||||||||||||| |||||||||||||||  | |||| |||||| |||  |||||||||||||| |||    
T  6043548 tatcaagaaaatttcaagaatgacatggaagaataatcacccttagattttatcaagaaatagtgctgaaattaatattaaccaataaaatctcagcctg 6043449  T
Q  571 gctggaaatcatggggtggtgggtgttatgtgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattctt 670  Q
    || ||||||||||||||| ||||||||||||          ||||||| |||||||||||||||||||||||| |||||||| |||| ||||||||||||    
T  6043448 gccggaaatcatggggtgttgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattctt 6043349  T
Q  671 aaatttttcttgataaaatcattcttgatatcta 704  Q
    ||||||||||| ||||||||||||||||||||||    
T  6043348 aaatttttctt-ataaaatcattcttgatatcta 6043316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 125; E-Value: 7e-64
Query Start/End: Original strand, 473 - 704
Target Start/End: Complemental strand, 3522041 - 3521811
Alignment:
Q  473 tcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctggc 572  Q
    ||||||||| ||||| |||||||||| |||||||||||| ||| |||||||||||||||  |||||| ||||||||||  ||||||||||| ||| ||||    
T  3522041 tcaagaaaatttcaaaaatgacatggcagaataatcaccattagattttatcaagaaatagttctgaaattaatgttaaccaataaaatcttagtttggc 3521942  T
Q  573 tggaaatcatggggtggtgggtgttatgtgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaa 672  Q
     ||||||||||||||||||||||||||||          ||||||| |||||||||||||||||||||||| |||||||| |||| ||||||||||||||    
T  3521941 cggaaatcatggggtggtgggtgttatgtatctttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaa 3521842  T
Q  673 atttttcttgataaaatcattcttgatatcta 704  Q
    ||||||||| ||||||||||||||||||||||    
T  3521841 atttttctt-ataaaatcattcttgatatcta 3521811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 122; E-Value: 4e-62
Query Start/End: Original strand, 471 - 704
Target Start/End: Original strand, 3362806 - 3363040
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctg 570  Q
    ||||||||||| | |||||||||||||| ||||||| |||||||| |||||||||||||||  | |||| ||||||||||  ||||||||||||||||||    
T  3362806 tatcaagaaaattccaagaatgacatggcagaataaccacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagtctg 3362905  T
Q  571 gctggaaatcatggggtggtgggtgttatg--tgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattc 668  Q
    || |||||||||||||||||||||||||||  |          ||||||| |||||||||||||||||||||||| |||| ||| |||||||||||||||    
T  3362906 gccggaaatcatggggtggtgggtgttatgtatctttttttttatgaaagattaataaatgagactgaaatctaaaggtggttattgtgtcatgtcattc 3363005  T
Q  669 ttaaatttttcttgataaaatcattcttgatatcta 704  Q
    ||||||||||||| ||||||||||||||||||||||    
T  3363006 ttaaatttttctt-ataaaatcattcttgatatcta 3363040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 118; E-Value: 1e-59
Query Start/End: Original strand, 473 - 704
Target Start/End: Original strand, 4892232 - 4892463
Alignment:
Q  473 tcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctggc 572  Q
    ||||||||| || ||||||||||||| |||||||||||||||| |||||||||||||||  | |||| ||||||||||  |||||||||||||| |||||    
T  4892232 tcaagaaaattttaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctggc 4892331  T
Q  573 tggaaatcatggggtggtgggtgttatgt-gnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattctta 671  Q
     ||||||||||||||||||||||||||||           ||||||| |||||||||||||||||||||||| |||||||| |||| ||||||||||||     
T  4892332 cggaaatcatggggtggtgggtgttatgtatcttcttttaatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttg 4892431  T
Q  672 aatttttcttgataaaatcattcttgatatcta 704  Q
    |||||||||| ||||||||||||||||||||||    
T  4892432 aatttttctt-ataaaatcattcttgatatcta 4892463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 118; E-Value: 1e-59
Query Start/End: Original strand, 473 - 704
Target Start/End: Complemental strand, 33584364 - 33584133
Alignment:
Q  473 tcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctggc 572  Q
    ||||||||| || ||||||||||||| |||||||||||||||| |||||||||||||||  | |||| ||||||||||  |||||||||||||| |||||    
T  33584364 tcaagaaaattttaagaatgacatggcagaataatcacccttaaattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctggc 33584265  T
Q  573 tggaaatcatggggtggtgggtgttatgt-gnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattctta 671  Q
     ||||||||||||||||||||||||||||           ||||||| |||||||||||||||||||||||| |||||||| |||| ||||||||||||     
T  33584264 cggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttg 33584165  T
Q  672 aatttttcttgataaaatcattcttgatatcta 704  Q
    |||||||||| ||||||||||||||||||||||    
T  33584164 aatttttctt-ataaaatcattcttgatatcta 33584133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 114; E-Value: 3e-57
Query Start/End: Original strand, 473 - 704
Target Start/End: Complemental strand, 22913089 - 22912861
Alignment:
Q  473 tcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctggc 572  Q
    |||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| | |||| ||||||||||| |||||||||||| ||| |||    
T  22913089 tcaagaaaaattcaagaatgacatggcagaataatcacccttagattttatcaagaaattgtactgaaattaatgttagccaataaaatctctgtcgggc 22912990  T
Q  573 tggaaatcatggggtggtgggtgttatgtgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaa 672  Q
      |||||||||||||||||| ||||||||          |||| ||   ||||||||||||||||||||||||||||||| |||| |||||||||||| |    
T  22912989 cagaaatcatggggtggtggatgttatgtatttttttttatgagag--aaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttga 22912892  T
Q  673 atttttcttgataaaatcattcttgatatcta 704  Q
    || ||||||||| |||||||||||||||||||    
T  22912891 atctttcttgat-aaatcattcttgatatcta 22912861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 114; E-Value: 3e-57
Query Start/End: Original strand, 473 - 704
Target Start/End: Original strand, 25398268 - 25398499
Alignment:
Q  473 tcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctggc 572  Q
    ||||||||| || ||||||||||||| |||||||||||||||| |||||||||||||||  | |||| ||||||||||  |||||||||||||| |||||    
T  25398268 tcaagaaaattttaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctggc 25398367  T
Q  573 tggaaatcatggggtggtgggtgttatgt-gnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattctta 671  Q
     ||||||||||||||||||||||||||||           ||||||| |||||||||||||||||||||||| |||||||| |||| ||||||||| ||     
T  25398368 cggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattgttg 25398467  T
Q  672 aatttttcttgataaaatcattcttgatatcta 704  Q
    |||||||||| ||||||||||||||||||||||    
T  25398468 aatttttctt-ataaaatcattcttgatatcta 25398499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 471 - 704
Target Start/End: Original strand, 8145403 - 8145634
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctg 570  Q
    ||||||||||| |||||||||||||||| |||||||||||||||| |||||||||||||||  |  ||| | ||||||||| |||||||||||||| |||    
T  8145403 tatcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcttgaaactaatgttagccaataaaatctcagcctg 8145502  T
Q  571 gctggaaatcatggggtggtgggtgttatgtgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattctt 670  Q
    |  ||||||||| ||||||||||||||||||          ||||||| |||||||||||||||||||||||| |||||||| |||| ||||||||||||    
T  8145503 gtcggaaatcat-gggtggtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattctt 8145601  T
Q  671 aaatttttcttgataaaatcattcttgatatcta 704  Q
     ||| |||||| ||||||||||||||||||||||    
T  8145602 gaatctttctt-ataaaatcattcttgatatcta 8145634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 471 - 704
Target Start/End: Original strand, 14138696 - 14138928
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctg 570  Q
    ||||||||||| ||||||||| |||||| |||||||||||||||| |||||||||||||||  | |||| ||||||||||| |||||||||||||| |||    
T  14138696 tatcaagaaaatttcaagaattacatggcagaataatcacccttaaattttatcaagaaatagtcctgaaattaatgttagccaataaaatctcagcctg 14138795  T
Q  571 gctggaaatcatggggtggtgggtgttatgtgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattctt 670  Q
       ||||||||||||||||||||||||||||          ||||||| ||||||||||||| |||||||||| |||||||| |||| ||||||||||||    
T  14138796 atcggaaatcatggggtggtgggtgttatgtatttttttttatgaaagattaataaatgagattgaaatctaaaggtgattattgtgccatgtcattctt 14138895  T
Q  671 aaatttttcttgataaaatcattcttgatatcta 704  Q
     ||| |||||| |||||||||||||| |||||||    
T  14138896 gaatctttctt-ataaaatcattcttaatatcta 14138928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 108; E-Value: 1e-53
Query Start/End: Original strand, 471 - 704
Target Start/End: Original strand, 2477664 - 2477897
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctg 570  Q
    ||||||||||| || ||||||||||||| |||||||||||||||| |||||||||||||||  |  ||| ||||||||||||||||||||| |||| |||    
T  2477664 tatcaagaaaattttaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcttgaaattaatgttagtcaataaaatttcagcctg 2477763  T
Q  571 gctggaaatcatggggtggtgggtgttatgt-gnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattct 669  Q
    || ||||||||||||||||||||||||||||           ||||||| ||||||||| |||||||||||||| |||||| | |||| |||||||||||    
T  2477764 gccggaaatcatggggtggtgggtgttatgtattttttttttatgaaagattaataaataagactgaaatctaaaggtgatcattgtgccatgtcattct 2477863  T
Q  670 taaatttttcttgataaaatcattcttgatatcta 704  Q
    || || |||||| ||||||||||||||||||||||    
T  2477864 tagatctttctt-ataaaatcattcttgatatcta 2477897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 108; E-Value: 1e-53
Query Start/End: Original strand, 471 - 704
Target Start/End: Complemental strand, 37321830 - 37321597
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctg 570  Q
    ||||||||||| || ||||||||||||| |||||||||||||||| |||||||||| ||||  |  ||| ||||||||||| |||||||||||||||||     
T  37321830 tatcaagaaaattttaagaatgacatggcagaataatcacccttaaattttatcaataaatagtcttgaaattaatgttagccaataaaatctcagtcta 37321731  T
Q  571 gctggaaatcatggggtggtgggtgttatgt-gnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattct 669  Q
    || ||||||||||||||||||||||||||||           ||||||| |||||||||||||||||||||||| |||||||| |||| ||| |||||||    
T  37321730 gccggaaatcatggggtggtgggtgttatgtattttttatttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatttcattct 37321631  T
Q  670 taaatttttcttgataaaatcattcttgatatcta 704  Q
    | ||| |||||| ||||||||||||||||||||||    
T  37321630 tgaatatttctt-ataaaatcattcttgatatcta 37321597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 108; E-Value: 1e-53
Query Start/End: Original strand, 471 - 704
Target Start/End: Complemental strand, 38899763 - 38899529
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctg 570  Q
    ||||||||||| | |||||||||||||| ||||||| |||||||| |||||||||||||||  | |||| ||||||||||  ||||||||||||||||||    
T  38899763 tatcaagaaaattccaagaatgacatggcagaataaccacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagtctg 38899664  T
Q  571 gctggaaatcatggggtggtgggtgttatgt-gnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattct 669  Q
    || | |||||||||||||||||||||||| |           ||||||| |||||||||||||||||||||||| |||| ||| |||| |||||||||||    
T  38899663 gccgaaaatcatggggtggtgggtgttatatatcttttttttatgaaagattaataaatgagactgaaatctaaaggtggttattgtgccatgtcattct 38899564  T
Q  670 taaatttttcttgataaaatcattcttgatatcta 704  Q
    | ||||||| || ||||||||||||||||||||||    
T  38899563 tgaatttttttttataaaatcattcttgatatcta 38899529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 106; E-Value: 2e-52
Query Start/End: Original strand, 471 - 704
Target Start/End: Original strand, 12850829 - 12851063
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctg 570  Q
    ||||||||||| | ||| |||||||||| ||||||| |||||||| |||||||||||||||  | |||| ||||||||||  |||||||||||||| |||    
T  12850829 tatcaagaaaattccaaaaatgacatggcagaataaccacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctg 12850928  T
Q  571 gctggaaatcatggggtggtgggtgttatg--tgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattc 668  Q
    || |||||||||||||||||||||||||||  |          ||||||| |||||||||||||||||||||||| |||| ||| |||| ||||||||||    
T  12850929 gccggaaatcatggggtggtgggtgttatgtattttcttttttatgaaagattaataaatgagactgaaatctaaaggtggttattgtgccatgtcattc 12851028  T
Q  669 ttaaatttttcttgataaaatcattcttgatatcta 704  Q
    || |||||||||| ||||||||||||||||||||||    
T  12851029 ttgaatttttctt-ataaaatcattcttgatatcta 12851063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 105; E-Value: 6e-52
Query Start/End: Original strand, 473 - 704
Target Start/End: Complemental strand, 17545720 - 17545486
Alignment:
Q  473 tcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctggc 572  Q
    |||||||||||||||||||||||||| |||||||||||| ||| |||||||||||||||| | |||| |||||||||||||||||||||||| ||| |||    
T  17545720 tcaagaaaaattcaagaatgacatggcagaataatcaccattagattttatcaagaaattgtactgaaattaatgttagtcaataaaatctctgtcgggc 17545621  T
Q  573 tggaaatcatggggtggtgggtgtta------tgtgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcat 666  Q
     |||||||||||||||||||||||||      | |           |||||||  |||||||||||||||||||||||| |||||| |||||||||||||    
T  17545620 cggaaatcatggggtggtgggtgttatttatttttattttttttattgaaagg--aataaatgagactgaaatctaaggatgattattgtgtcatgtcat 17545523  T
Q  667 tcttaaatttttcttgataaaatcattcttgatatcta 704  Q
    |||||||| ||| ||||| |||||||||||||||||||    
T  17545522 tcttaaatattttttgat-aaatcattcttgatatcta 17545486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 102; E-Value: 4e-50
Query Start/End: Original strand, 475 - 671
Target Start/End: Complemental strand, 4434040 - 4433844
Alignment:
Q  475 aagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctggctg 574  Q
    ||||||| ||||||||||| |||| |||||||||||||||| |||||||||||||||  |||||| ||||||||||  |||||||||||||||||||| |    
T  4434040 aagaaaatttcaagaatgatatggcagaataatcacccttagattttatcaagaaatagttctgaaattaatgttaaccaataaaatctcagtctggccg 4433941  T
Q  575 gaaatcatggggtggtgggtgttatgtgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattctta 671  Q
    ||||||||||| |||||||||||||||          ||||||| ||||||||| |||||||||||||| |||||||| |||| |||||||||||||    
T  4433940 gaaatcatgggatggtgggtgttatgtatttttttttatgaaagattaataaataagactgaaatctaaaggtgattattgtgccatgtcattctta 4433844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 97; E-Value: 4e-47
Query Start/End: Original strand, 458 - 685
Target Start/End: Complemental strand, 31640990 - 31640763
Alignment:
Q  458 gagcaatgatatatatcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaata 557  Q
    |||||||| |||||||||||||| ||||||||||||||||| ||||||| |||||||| |||||||||||||||| |  ||| ||||||||||| |||||    
T  31640990 gagcaatgctatatatcaagaaagattcaagaatgacatggcagaataaccacccttagattttatcaagaaattgtcatgaaattaatgttagccaata 31640891  T
Q  558 aaatctcagtctggctggaaatcatggggtggtgggtgttatgtgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtg 657  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||          ||||||||||||||||| |||    ||||||| |  ||||| | ||    
T  31640890 aaatctcagcctggccggaaatcatggggtggtgggtgttatgtatttttttttatgaaaggttaataaataagatatcaatctaaagtcgattattctg 31640791  T
Q  658 tcatgtcattcttaaatttttcttgata 685  Q
     |||||||||||| ||| ||||||||||    
T  31640790 ccatgtcattcttgaatctttcttgata 31640763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 471 - 692
Target Start/End: Complemental strand, 11361168 - 11360947
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctg 570  Q
    ||||||||||| || ||||||||||||| |||||||||||||||| |||||||||||||||  | |||| ||||||||||| |||||||||||||| |||    
T  11361168 tatcaagaaaattttaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttagccaataaaatctcagcctg 11361069  T
Q  571 gctggaaatcatggggtggtgggtgttatgt-gnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattct 669  Q
    || ||||||||||||||||||||||||||||           ||||||| ||||||||| ||| |||||||||| | |||||| |||| |||||||||||    
T  11361068 gccggaaatcatggggtggtgggtgttatgtattttttttgtatgaaagattaataaattagattgaaatctaaagatgattattgtgccatgtcattct 11360969  T
Q  670 taaatttttcttgataaaatcat 692  Q
    | ||| |||||| ||||||||||    
T  11360968 tgaatctttctt-ataaaatcat 11360947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 471 - 704
Target Start/End: Complemental strand, 12614770 - 12614541
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctg 570  Q
    |||||||||| ||||||||||||||||  | |||||||||||||| |||||||||||||||| | |||| ||||||||||| |||||||||||||| |||    
T  12614770 tatcaagaaagattcaagaatgacatgacataataatcacccttagattttatcaagaaattgtcctgaaattaatgttagccaataaaatctcagcctg 12614671  T
Q  571 gctggaaatcatggggtggtgggtgttatgtgnnnnnnnnn---atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcatt 667  Q
      |       ||||| ||||||||||||| |             |||||||||||||||||||||||||||||||| |||||||| |||| |||||||||    
T  12614670 ttt-------atgggatggtgggtgttattttttttttttttttatgaaaggttaataaatgagactgaaatctaaaggtgattattgtgccatgtcatt 12614578  T
Q  668 cttaaatttttcttgataaaatcattcttgatatcta 704  Q
    ||||||| ||| ||||||||||||| |||||||||||    
T  12614577 cttaaatcttttttgataaaatcatacttgatatcta 12614541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 471 - 696
Target Start/End: Original strand, 27481854 - 27482077
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctg 570  Q
    ||||||||||||||||||||||||||||   |||||||||  |||  |||||| |||||||| |   || ||||||||||| ||||||||| |||  ||     
T  27481854 tatcaagaaaaattcaagaatgacatgg---aataatcacatttag-ttttatgaagaaattgtcacgaaattaatgttagccaataaaatttcatccta 27481949  T
Q  571 gctggaaatcatggggtggtgggtgttatgt-gnnnnnnnnnatgaaaggttaataaatgagact-gaaatctaagggtgattactgtgtcatgtcattc 668  Q
    |  ||||||||||||||||||||||||||||           || |||||||||||||| ||| |  |||||||| |||||||| | ||| |||||||||    
T  27481950 gtcggaaatcatggggtggtgggtgttatgtattttttttttataaaaggttaataaataagattaaaaatctaaaggtgattattctgttatgtcattc 27482049  T
Q  669 ttaaatttttcttgataaaatcattctt 696  Q
    || ||| ||| |||||||||||||||||    
T  27482050 ttgaatcttttttgataaaatcattctt 27482077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 636 - 701
Target Start/End: Complemental strand, 2477713 - 2477648
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    ||||||||||||||||| | || ||||||||||||||| |||||||||||||||| ||||||||||    
T  2477713 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatat 2477648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 636 - 701
Target Start/End: Original strand, 11361119 - 11361184
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    ||||||||||||||||| | || ||||||||||||||| |||||||||||||||| ||||||||||    
T  11361119 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatat 11361184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 636 - 701
Target Start/End: Complemental strand, 4892279 - 4892214
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    ||||||||||||||||| | || ||||||||||||||| ||||||||| |||||| ||||||||||    
T  4892279 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatat 4892214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 636 - 701
Target Start/End: Complemental strand, 8145452 - 8145387
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    ||||||||||||||||| | || |||||||||||| || |||||||||||||||| ||||||||||    
T  8145452 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 8145387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 703 - 760
Target Start/End: Complemental strand, 8564969 - 8564912
Alignment:
Q  703 tactccctctgtccctatatgtaagcacctttttattagaggaaaagattgcttacat 760  Q
    ||||||||| |||||||||||||||||||||||||||||| ||||| | |||||||||    
T  8564969 tactccctccgtccctatatgtaagcacctttttattagaagaaaaaaatgcttacat 8564912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 636 - 701
Target Start/End: Original strand, 12614721 - 12614786
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    ||||||||||||||||| | ||||||||||||||| ||| ||||||||||||||  ||||||||||    
T  12614721 aaatctaagggtgattattatgtcatgtcattcttgaatctttcttgataaaatatttcttgatat 12614786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 636 - 701
Target Start/End: Original strand, 22913042 - 22913107
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    ||||||||||||||||| | || |||||||||||| |||||||||||| |||||| ||||||||||    
T  22913042 aaatctaagggtgattattctgccatgtcattcttgaatttttcttgaaaaaatctttcttgatat 22913107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 636 - 701
Target Start/End: Complemental strand, 25398315 - 25398250
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    ||||||||||||||||| | || ||||||||||||||| ||||||||| |||||| ||||||||||    
T  25398315 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatat 25398250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 636 - 701
Target Start/End: Original strand, 6043499 - 6043564
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    ||||||||||||||||| | |  |||||||||||| || |||||||||||||||| ||||||||||    
T  6043499 aaatctaagggtgattattcttccatgtcattcttgaaattttcttgataaaatctttcttgatat 6043564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 636 - 701
Target Start/End: Original strand, 33584317 - 33584382
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    |||| |||||||||||| | || ||||||||||||||| ||||||||| |||||| ||||||||||    
T  33584317 aaatttaagggtgattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatat 33584382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 636 - 696
Target Start/End: Original strand, 37321781 - 37321841
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattctt 696  Q
    |||| |||||||||||| | || ||||||||||||||| |||||||||||||||| |||||    
T  37321781 aaatttaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttctt 37321841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 620 - 670
Target Start/End: Original strand, 13664737 - 13664787
Alignment:
Q  620 ttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattctt 670  Q
    ||||||||| ||||||||||||||||||||||| | | |||||||||||||    
T  13664737 ttaataaataagactgaaatctaagggtgattattctatcatgtcattctt 13664787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 636 - 701
Target Start/End: Complemental strand, 3362855 - 3362790
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    ||||||||||||| ||| | || ||||||||||||  | |||||||||||||||| ||||||||||    
T  3362855 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatat 3362790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 636 - 701
Target Start/End: Complemental strand, 14138745 - 14138680
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    |||| |||||||||||| | || ||||| |||||| || |||||||||||||||| ||||||||||    
T  14138745 aaatttaagggtgattattctgccatgtaattcttgaaattttcttgataaaatctttcttgatat 14138680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 471 - 520
Target Start/End: Original strand, 22912879 - 22912928
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatattt 520  Q
    |||||||||| ||||||||||||||||| | |||||||||||||| ||||    
T  22912879 tatcaagaaagattcaagaatgacatggcacaataatcacccttagattt 22912928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 536 - 601
Target Start/End: Complemental strand, 36880295 - 36880230
Alignment:
Q  536 ctgatattaatgttagtcaataaaatctcagtctggctggaaatcatggggtggtgggtgttatgt 601  Q
    |||| ||||||||||| ||||||||| |||||||||  |||||| ||||| |||||| ||||||||    
T  36880295 ctgaaattaatgttagccaataaaatttcagtctggtcggaaattatgggatggtggatgttatgt 36880230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 636 - 701
Target Start/End: Original strand, 38899714 - 38899779
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    ||||||||||||| ||| | || ||||||||||||  | |||||||||||||||| ||||||||||    
T  38899714 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatat 38899779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 645 - 701
Target Start/End: Complemental strand, 10458465 - 10458409
Alignment:
Q  645 ggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    |||||||| | || |||||||||||| ||||||||||||||||||  ||||||||||    
T  10458465 ggtgattattttgccatgtcattcttgaatttttcttgataaaatttttcttgatat 10458409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 471 - 511
Target Start/End: Original strand, 10458425 - 10458465
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacc 511  Q
    |||||||||||||||||||||||||||| | ||||||||||    
T  10458425 tatcaagaaaaattcaagaatgacatggcaaaataatcacc 10458465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 482 - 520
Target Start/End: Complemental strand, 13664791 - 13664753
Alignment:
Q  482 attcaagaatgacatggtagaataatcacccttatattt 520  Q
    |||||||||||||||| ||||||||||||||||| ||||    
T  13664791 attcaagaatgacatgatagaataatcacccttagattt 13664753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 470 - 508
Target Start/End: Original strand, 31640762 - 31640800
Alignment:
Q  470 atatcaagaaaaattcaagaatgacatggtagaataatc 508  Q
    ||||||||||| ||||||||||||||||| |||||||||    
T  31640762 atatcaagaaagattcaagaatgacatggcagaataatc 31640800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 612 - 670
Target Start/End: Complemental strand, 36880213 - 36880150
Alignment:
Q  612 atgaaaggttaataaatgagactgaaa-tctaagggtgattac----tgtgtcatgtcattctt 670  Q
    |||||||||||||| |||||||||||| ||||||||||||||     |||||||||||||||||    
T  36880213 atgaaaggttaatagatgagactgaaaatctaagggtgattatatattgtgtcatgtcattctt 36880150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 636 - 701
Target Start/End: Original strand, 4433995 - 4434060
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    ||||||||||||||||| | || ||| |||||||| || ||||||| | |||||| ||||||||||    
T  4433995 aaatctaagggtgattattctgccatatcattcttgaaattttcttaaaaaaatctttcttgatat 4434060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 475 - 520
Target Start/End: Complemental strand, 4892441 - 4892396
Alignment:
Q  475 aagaaaaattcaagaatgacatggtagaataatcacccttatattt 520  Q
    |||||||||||||||||||||||| | |||||||||| ||| ||||    
T  4892441 aagaaaaattcaagaatgacatggcacaataatcacctttagattt 4892396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 636 - 701
Target Start/End: Complemental strand, 12850878 - 12850813
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    ||||||||||||| ||| | || ||||||||| ||  | |||||||||||||||| ||||||||||    
T  12850878 aaatctaagggtggttattctgccatgtcatttttggaattttcttgataaaatctttcttgatat 12850813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 636 - 701
Target Start/End: Original strand, 17545673 - 17545738
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    |||||||| |||||||| | || |||||||||||| |||||||||||| ||| |  ||||||||||    
T  17545673 aaatctaatggtgattattctgccatgtcattcttgaatttttcttgagaaattttttcttgatat 17545738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 659 - 696
Target Start/End: Complemental strand, 27481880 - 27481843
Alignment:
Q  659 catgtcattcttaaatttttcttgataaaatcattctt 696  Q
    |||||||||||| ||||||||||||||||||| |||||    
T  27481880 catgtcattcttgaatttttcttgataaaatctttctt 27481843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 475 - 520
Target Start/End: Original strand, 33584155 - 33584200
Alignment:
Q  475 aagaaaaattcaagaatgacatggtagaataatcacccttatattt 520  Q
    |||||||||||||||||||||||| | |||||||||| ||| ||||    
T  33584155 aagaaaaattcaagaatgacatggcacaataatcacctttagattt 33584200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 702 - 743
Target Start/End: Original strand, 34547730 - 34547771
Alignment:
Q  702 ctactccctctgtccctatatgtaagcacctttttattagag 743  Q
    |||||| |||||||||||||||||| ||||||||||| ||||    
T  34547730 ctactctctctgtccctatatgtaaacacctttttatcagag 34547771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 124; Significance: 3e-63; HSPs: 7)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 124; E-Value: 3e-63
Query Start/End: Original strand, 471 - 704
Target Start/End: Original strand, 25964 - 26197
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctg 570  Q
    ||||||||||| |||||||||||||||| |||||||||||||||| |||||||||||||||  |||||| ||||||||||  |||||||||||||| |||    
T  25964 tatcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagttctgaaattaatgttaaccaataaaatctcaggctg 26063  T
Q  571 gctggaaatcatggggtggtgggtgttatgt-gnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattct 669  Q
    || |||||||||||| |||||||||||||||           ||||||| |||||||||||||||||||||||| |||||||| |||| |||||||||||    
T  26064 gccggaaatcatgggatggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattct 26163  T
Q  670 taaatttttcttgataaaatcattcttgatatcta 704  Q
    | |||||||||| ||||||||||||||||||||||    
T  26164 tgaatttttctt-ataaaatcattcttgatatcta 26197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 120; E-Value: 7e-61
Query Start/End: Original strand, 471 - 704
Target Start/End: Original strand, 16012 - 16245
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctg 570  Q
    ||||||||||| |||||||||||||||| |||||||||||||||| |||||||||||||||  |||||| ||||||||||  |||||||||||||| |||    
T  16012 tatcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagttctgaaattaatgttaaccaataaaatctcaggctg 16111  T
Q  571 gctggaaatcatggggtggtgggtgttatgt-gnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattct 669  Q
    || |||||||||||| |||||||||||||||           ||||||| |||||||||||||||||||||||| | |||||| |||| |||||||||||    
T  16112 gccggaaatcatgggatggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaagatgattattgtgccatgtcattct 16211  T
Q  670 taaatttttcttgataaaatcattcttgatatcta 704  Q
    | |||||||||| ||||||||||||||||||||||    
T  16212 tgaatttttctt-ataaaatcattcttgatatcta 16245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 471 - 601
Target Start/End: Original strand, 8430 - 8560
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctg 570  Q
    ||||||||||| |||||||||||||||| |||||||||||||||| |||||||||||||||  |||||| ||||||||||  |||||||||||||| |||    
T  8430 tatcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagttctgaaattaatgttaaccaataaaatctcaggctg 8529  T
Q  571 gctggaaatcatggggtggtgggtgttatgt 601  Q
    || |||||||||||| |||||||||||||||    
T  8530 gccggaaatcatgggatggtgggtgttatgt 8560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 636 - 701
Target Start/End: Complemental strand, 8479 - 8414
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    ||||||||||||||||| | || |||||||||||| || |||||||||||||||| ||||||||||    
T  8479 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 8414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 636 - 701
Target Start/End: Complemental strand, 16061 - 15996
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    ||||||||||||||||| | || |||||||||||| || |||||||||||||||| ||||||||||    
T  16061 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 15996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 636 - 701
Target Start/End: Complemental strand, 26013 - 25948
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    ||||||||||||||||| | || |||||||||||| || |||||||||||||||| ||||||||||    
T  26013 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 25948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #7
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 475 - 520
Target Start/End: Complemental strand, 26175 - 26130
Alignment:
Q  475 aagaaaaattcaagaatgacatggtagaataatcacccttatattt 520  Q
    |||||||||||||||||||||||| | |||||||||| ||| ||||    
T  26175 aagaaaaattcaagaatgacatggcacaataatcacctttagattt 26130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 119; Significance: 3e-60; HSPs: 2)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 119; E-Value: 3e-60
Query Start/End: Original strand, 471 - 704
Target Start/End: Original strand, 47878 - 48110
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctg 570  Q
    ||||||||||| |||||||||||||||| |||||||||||||||| |||||||||||||||  | |||| ||||||||||  |||||||||||||| |||    
T  47878 tatcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctg 47977  T
Q  571 gctggaaatcatggggtggtgggtgttatgtgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattctt 670  Q
    || ||||||||||||||||||||||||||||          ||||||| |||||||||||||||||||||||| | |||||| ||||  |||||||||||    
T  47978 gccggaaatcatggggtggtgggtgttatgtatttatttttatgaaagattaataaatgagactgaaatctaaagatgattattgtgctatgtcattctt 48077  T
Q  671 aaatttttcttgataaaatcattcttgatatcta 704  Q
     ||| |||||| ||||||||||||||||||||||    
T  48078 gaatctttctt-ataaaatcattcttgatatcta 48110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085; HSP #2
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 636 - 700
Target Start/End: Complemental strand, 47927 - 47863
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgata 700  Q
    ||||||||||||||||| | || |||||||||||| || |||||||||||||||| |||||||||    
T  47927 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgata 47863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 118; Significance: 1e-59; HSPs: 2)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 118; E-Value: 1e-59
Query Start/End: Original strand, 473 - 704
Target Start/End: Original strand, 12872 - 13103
Alignment:
Q  473 tcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctggc 572  Q
    ||||||||| |||||||||||||||| |||||||||| ||||| |||||||||||||||  | |||| ||||||||||  |||||||||||||| |||||    
T  12872 tcaagaaaatttcaagaatgacatggcagaataatcatccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctggc 12971  T
Q  573 tggaaatcatggggtggtgggtgttatgt-gnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattctta 671  Q
     ||||||||||||||||||| ||||||||           ||||||| |||||||||||||||||||||||| ||| |||| ||||||||||||||||||    
T  12972 cggaaatcatggggtggtggatgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtaattattgtgtcatgtcattctta 13071  T
Q  672 aatttttcttgataaaatcattcttgatatcta 704  Q
    |||||||||| ||||||||||||||||||||||    
T  13072 aatttttctt-ataaaatcattcttgatatcta 13103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 636 - 701
Target Start/End: Complemental strand, 12919 - 12854
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    |||||||||| |||||| | || |||||||||||| || ||||||||| |||||| ||||||||||    
T  12919 aaatctaaggatgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatat 12854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 115; Significance: 6e-58; HSPs: 67)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 115; E-Value: 6e-58
Query Start/End: Original strand, 471 - 704
Target Start/End: Complemental strand, 22426381 - 22426149
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctg 570  Q
    ||||||||||| || || |||||||||| |||||||||||||||| |||||||||||||||  |  ||| ||||||||||| ||||||||| ||||||||    
T  22426381 tatcaagaaaattttaaaaatgacatggcagaataatcacccttagattttatcaagaaatagtcttgaaattaatgttagccaataaaatttcagtctg 22426282  T
Q  571 gctggaaatcatggggtggtgggtgttatgtgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattctt 670  Q
    || ||||||||||||||||||||||||||||          ||||||| ||||||||||||||||||||||||  ||||||| |||| ||||||||||||    
T  22426281 gccggaaatcatggggtggtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaatgtgattattgtgccatgtcattctt 22426182  T
Q  671 aaatttttcttgataaaatcattcttgatatcta 704  Q
     ||| |||||| ||||||||||||||||||||||    
T  22426181 gaatctttctt-ataaaatcattcttgatatcta 22426149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 115; E-Value: 6e-58
Query Start/End: Original strand, 471 - 711
Target Start/End: Original strand, 33839559 - 33839804
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctg 570  Q
    |||||| ||||||| |||||| |||||  |||||||||||| ||| |||||||||||||||| || ||| ||||||||||| ||||||||||||| ||||    
T  33839559 tatcaaaaaaaatttaagaataacatgacagaataatcaccattagattttatcaagaaattgttttgaaattaatgttagccaataaaatctcaatctg 33839658  T
Q  571 gctggaaatcatggggtggtgggtgttatgtgnnnnnnnnn-----atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtca 665  Q
    || | ||||||||||||||| ||||||||||               |||||||||||||||||||||||||||| |||||||||||| ||||||||||||    
T  33839659 gccgtaaatcatggggtggtaggtgttatgtattttttctttttttatgaaaggttaataaatgagactgaaatttaagggtgattattgtgtcatgtca 33839758  T
Q  666 ttcttaaatttttcttgataaaatcattcttgatatctactccctc 711  Q
    ||||| ||| |||||||||||||||||||||||||| |||||||||    
T  33839759 ttcttgaatctttcttgataaaatcattcttgatatatactccctc 33839804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 114; E-Value: 3e-57
Query Start/End: Original strand, 473 - 704
Target Start/End: Complemental strand, 3137449 - 3137218
Alignment:
Q  473 tcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctggc 572  Q
    ||||||||| |||||||||||||||| | |||||||||||||| |||||||||||||||  | |||| ||||||||||  |||||||||||||| |||||    
T  3137449 tcaagaaaatttcaagaatgacatggcaaaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctggc 3137350  T
Q  573 tggaaatcatggggtggtgggtgttatgt-gnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattctta 671  Q
     ||||||||||||||| ||||||||||||           ||||||| |||||||||||||||||||||||| |||||||| |||| ||||||||||||     
T  3137349 cggaaatcatggggtgatgggtgttatgtatcttttttgtatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttg 3137250  T
Q  672 aatttttcttgataaaatcattcttgatatcta 704  Q
    |||||||||| ||||||||||||||||||||||    
T  3137249 aatttttctt-ataaaatcattcttgatatcta 3137218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 471 - 704
Target Start/End: Original strand, 3456092 - 3456325
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctg 570  Q
    ||||||||||| || |||||||| |||| |||||||||||||||| |||||||||||||||  | |||  ||||||||||  ||||||||||||||||||    
T  3456092 tatcaagaaaattttaagaatgatatggcagaataatcacccttagattttatcaagaaatagtcctggaattaatgttaaccaataaaatctcagtctg 3456191  T
Q  571 gctggaaatcatggggtggtgggtgttatgt-gnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattct 669  Q
    || ||||||||||||||||||||||||||||           ||||||| |||||||||||||||||||||||| | |||||| ||||||||||||||||    
T  3456192 gccggaaatcatggggtggtgggtgttatgtattttttttttatgaaagattaataaatgagactgaaatctaaagatgattagtgtgtcatgtcattct 3456291  T
Q  670 taaatttttcttgataaaatcattcttgatatcta 704  Q
    | ||| |||||| ||||||||||||||||||||||    
T  3456292 tgaatctttctt-ataaaatcattcttgatatcta 3456325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 110; E-Value: 6e-55
Query Start/End: Original strand, 475 - 704
Target Start/End: Original strand, 33113825 - 33114055
Alignment:
Q  475 aagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctggctg 574  Q
    ||||||| ||||||||| |||||| |||||||||||||||| |||||||||||||||  | |||| ||||||||||| ||||||||| |||||||||| |    
T  33113825 aagaaaatttcaagaattacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttagccaataaaatttcagtctggccg 33113924  T
Q  575 gaaatcatggggtggtgggtgttatg--tgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaa 672  Q
    ||||||||||||||||||||||||||  |          ||||||| ||||||||||||| |||||||||| |||||||| |||| |||||||||||| |    
T  33113925 gaaatcatggggtggtgggtgttatgtatttttttttttatgaaagattaataaatgagattgaaatctaaaggtgattattgtgccatgtcattcttga 33114024  T
Q  673 atttttcttgataaaatcattcttgatatcta 704  Q
    || |||||| ||||||||||||||||||||||    
T  33114025 atctttctt-ataaaatcattcttgatatcta 33114055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 486 - 704
Target Start/End: Original strand, 33145755 - 33145973
Alignment:
Q  486 aagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctggctggaaatcatggg 585  Q
    ||||||||||||| |||||||||||||||| |||||||||||||||| | |||| ||||||||||| |||||||||||||| ||| | |||||| ||| |    
T  33145755 aagaatgacatggcagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttagccaataaaatctcagcctgaccggaaattatgag 33145854  T
Q  586 gtggtgggtgttatgtgnnnnnnnnn-atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgat 684  Q
    |||||||||| |||||           ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| ||| |||||| ||    
T  33145855 gtggtgggtggtatgtattttttttttatgaaaggttaataaataagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttctt-at 33145953  T
Q  685 aaaatcattcttgatatcta 704  Q
    ||||||||||||||||||||    
T  33145954 aaaatcattcttgatatcta 33145973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 458 - 698
Target Start/End: Complemental strand, 41883273 - 41883031
Alignment:
Q  458 gagcaatgatatatatcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaata 557  Q
    |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| | | || |||||||||||||||||    
T  41883273 gagcaatgctatatatcaagaaaaattcaagaatgacatggcagaataatcacccttaaattttatcaagaaattgtcccgaaattaatgttagtcaata 41883174  T
Q  558 aaatctcagtctggctggaaatcatggggtggtgggtgttatg--tgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactg 655  Q
    ||||||||| |||||| ||||||||||||||||||||||||||  |          || ||||||| |||||| ||||||||||| || | |||||| |     
T  41883173 aaatctcagactggctagaaatcatggggtggtgggtgttatgtatttttttttttataaaaggttgataaataagactgaaatccaaagatgattattt 41883074  T
Q  656 tgtcatgtcattcttaaatttttcttgataaaatcattcttga 698  Q
    |  |||||||||||| ||| |||||| ||||||||||| ||||    
T  41883073 taccatgtcattcttgaatctttcttcataaaatcatttttga 41883031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 106; E-Value: 2e-52
Query Start/End: Original strand, 475 - 704
Target Start/End: Complemental strand, 36865060 - 36864836
Alignment:
Q  475 aagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctggctg 574  Q
    ||||||| || ||||||||||||||||||||||||||||||  ||||||||| ||||  | |||| ||||||||||| ||||| ||||||||    || |    
T  36865060 aagaaaattttaagaatgacatggtagaataatcacccttaggttttatcaaaaaatagtcctgaaattaatgttagccaatagaatctcag----gccg 36864965  T
Q  575 gaaatcatggggtggtgggtgttatgtgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaat 674  Q
    ||||||||||| |||||||||||||||          |||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| |||    
T  36864964 gaaatcatgggatggtgggtgttatgt-attttttatatgaaatgttaataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaat 36864866  T
Q  675 ttttcttgataaaatcattcttgatatcta 704  Q
     ||| |||||||||||||||||||||||||    
T  36864865 cttttttgataaaatcattcttgatatcta 36864836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 103; E-Value: 9e-51
Query Start/End: Original strand, 471 - 704
Target Start/End: Original strand, 6041912 - 6042138
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctg 570  Q
    ||||||||||| |||||||||||||||  |||||||||||||||| |||||||||||||||  | |||| ||||||||||| |||||||||||||| |||    
T  6041912 tatcaagaaaatttcaagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttagccaataaaatctcagcctg 6042011  T
Q  571 gctggaaatcatggggtggtgggtgttatgtgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattctt 670  Q
     | ||||||||||||||||||| |||||| |          ||||||  |||||||||||||||||||||||| |||||||| |||| ||||||||||||    
T  6042012 accggaaatcatggggtggtggttgttattt------ttttatgaaaaattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattctt 6042105  T
Q  671 aaatttttcttgataaaatcattcttgatatcta 704  Q
      || |||||| ||||||||||||||||||||||    
T  6042106 ggatctttctt-ataaaatcattcttgatatcta 6042138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 103; E-Value: 9e-51
Query Start/End: Original strand, 473 - 704
Target Start/End: Complemental strand, 8362080 - 8361843
Alignment:
Q  473 tcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctggc 572  Q
    |||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| | |||| ||||||||||| |||||||||||| ||| |||    
T  8362080 tcaagaaaaattcaagaatgacatggcagaataatcacccttagattttatcaagaaattgtactgaaattaatgttagccaataaaatctctgtcgggc 8361981  T
Q  573 tggaaatcatggggtggtgggtgttatg---------tgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgt 663  Q
     ||||||||||||||||||||||| |||         |          ||||||  | ||||||||||||||||||||||||||||||| ||||||||||    
T  8361980 cggaaatcatggggtggtgggtgtcatgtattttttttttttttttttatgaaa--tgaataaatgagactgaaatctaagggtgattattgtgtcatgt 8361883  T
Q  664 cattcttaaatttttcttgataaaatcattcttgatatcta 704  Q
    ||||||| ||| ||||||||| |||||||||||||||||||    
T  8361882 cattcttgaatatttcttgat-aaatcattcttgatatcta 8361843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 471 - 704
Target Start/End: Complemental strand, 3574564 - 3574330
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgata-ttaatgttagtcaataaaatctcagtct 569  Q
    ||||||||||| || ||||||||||||| |||||||||||||||| |||||||||||||||  |  ||| | |||||||||| ||||||||||||||  |    
T  3574564 tatcaagaaaattttaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcttgaaaattaatgttagccaataaaatctcagctt 3574465  T
Q  570 ggctggaaatcatggggtggtgggtgttatgtgnnnnnnnnn-atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattc 668  Q
    ||| ||||||||||||||||||||||||||||           ||||||| |||||||||||||||||||||||  |||||||| |||||||||||||||    
T  3574464 ggccggaaatcatggggtggtgggtgttatgtattttttttttatgaaagattaataaatgagactgaaatctagaggtgattattgtgtcatgtcattc 3574365  T
Q  669 ttaaatttttcttgataaaatcattcttgatatcta 704  Q
    ||  || |||||| ||||||||||||||||||||||    
T  3574364 ttggatctttctt-ataaaatcattcttgatatcta 3574330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 471 - 704
Target Start/End: Complemental strand, 19650937 - 19650704
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgata-ttaatgttagtcaataaaatctcagtct 569  Q
    ||||||||||| || ||||||||||||| |||||||||||| ||| ||||||||||||||   |  ||| | |||||||||| | ||||||||||||  |    
T  19650937 tatcaagaaaattttaagaatgacatggcagaataatcaccattagattttatcaagaaacagtcttgaaaattaatgttagccgataaaatctcagctt 19650838  T
Q  570 ggctggaaatcatggggtggtgggtgttatgtgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattct 669  Q
    ||| ||||||||||||||||||||||||||||          ||||||| |||||||||||||||||||||||| |||||||| ||||||||||||||||    
T  19650837 ggccggaaatcatggggtggtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattct 19650738  T
Q  670 taaatttttcttgataaaatcattcttgatatcta 704  Q
    |  || |||||| ||||||||||||||||||||||    
T  19650737 tggatctttctt-ataaaatcattcttgatatcta 19650704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 471 - 704
Target Start/End: Complemental strand, 37217090 - 37216857
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctg 570  Q
    ||||||||||| || ||||||||||||| |||||||||||||||| |||||||||||||||  |  ||| ||||||||||  |||||||||||||| ||     
T  37217090 tatcaagaaaattttaagaatgacatggcagaataatcacccttaaattttatcaagaaatagtcatgaaattaatgttaaccaataaaatctcagcctt 37216991  T
Q  571 gctggaaatcatggggtggtgggtgttatgt-gnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattct 669  Q
    |||| ||||||| ||||||||||||||||||           ||||||| |||||||||||||||||||||||| |||||||| |||  |||||||||||    
T  37216990 gctgaaaatcatagggtggtgggtgttatgtattttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtaccatgtcattct 37216891  T
Q  670 taaatttttcttgataaaatcattcttgatatcta 704  Q
    | ||| |||||| ||||||||||||||||||||||    
T  37216890 tgaatctttctt-ataaaatcattcttgatatcta 37216857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 471 - 704
Target Start/End: Original strand, 47738133 - 47738373
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctg 570  Q
    |||||||||| |||||||||||| |||| |||||||| ||| ||| ||||||| || ||||| | |||| ||||||||||| |||||||||||||| |||    
T  47738133 tatcaagaaatattcaagaatgatatggcagaataattacctttagattttataaaaaaattgtcctgaaattaatgttagccaataaaatctcagcctg 47738232  T
Q  571 gctggaaatcatggggtggtgggtgttatgtgnnnnnnnnnat-------gaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgt 663  Q
     |  |||||||||||||||||||||||||||          ||       |||||||||||||||||||||||||||||||| |||||| |||| |||||    
T  47738233 accagaaatcatggggtggtgggtgttatgtatttttttttattttttatgaaaggttaataaatgagactgaaatctaaggatgattattgtgccatgt 47738332  T
Q  664 cattcttaaatttttcttgataaaatcattcttgatatcta 704  Q
    ||||||| ||| |||||||||||||||||||||||||||||    
T  47738333 cattcttgaatctttcttgataaaatcattcttgatatcta 47738373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 473 - 704
Target Start/End: Complemental strand, 9797064 - 9796833
Alignment:
Q  473 tcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctggc 572  Q
    |||||||||||||||||||||||||| |||||||||||| ||| |||||||||||||||| | || | ||||||||||| |||||||||||| ||| |||    
T  9797064 tcaagaaaaattcaagaatgacatggcagaataatcaccattagattttatcaagaaattgtacttaaattaatgttagccaataaaatctctgtcgggc 9796965  T
Q  573 tggaaatcatggggtggtgggtgttatg---tgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattct 669  Q
     | ||||||||||||||||||| |||||   |          ||||||||  ||||||||||||||||||||||| ||||||| |||| |||||||||||    
T  9796964 cgaaaatcatggggtggtgggtcttatgtatttttcttttttatgaaagg--aataaatgagactgaaatctaagagtgattattgtgacatgtcattct 9796867  T
Q  670 taaatttttcttgataaaatcattcttgatatcta 704  Q
    | ||| ||||||||| |||||||||||||||||||    
T  9796866 tgaatctttcttgat-aaatcattcttgatatcta 9796833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 98; E-Value: 9e-48
Query Start/End: Original strand, 486 - 704
Target Start/End: Original strand, 3089460 - 3089680
Alignment:
Q  486 aagaatgacatggtagaataatcacccttatattttatcaagaaattattc-tgatattaatgttagtcaataaaatctcagtctggctggaaatcatgg 584  Q
    ||||||||||||| |||||||||||||||| |||||||||||||| ||||| ||| ||||||||||| ||||||||||||||  |||| |||||||||||    
T  3089460 aagaatgacatggcagaataatcacccttagattttatcaagaaa-tattcttgaaattaatgttagccaataaaatctcagcttggccggaaatcatgg 3089558  T
Q  585 ggtggtgggtgttatg---tgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttctt 681  Q
    ||||||||||| ||||   |          ||||||| |||||||||||||||||||||||| |||||||| |||| ||||||||||||| || ||||||    
T  3089559 ggtggtgggtgctatgtattatttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttagatctttctt 3089658  T
Q  682 gataaaatcattcttgatatcta 704  Q
     ||||||||||||||||||||||    
T  3089659 -ataaaatcattcttgatatcta 3089680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 471 - 704
Target Start/End: Original strand, 2754745 - 2754980
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctg 570  Q
    ||||||||||| || ||||||||||||| |||||||||||| ||| |||||||||||||||  | |||| ||||||||||  |||||||||||||| |||    
T  2754745 tatcaagaaaattttaagaatgacatggcagaataatcacctttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctg 2754844  T
Q  571 gctggaaatcatggggtggtgggtgttatg---tgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcatt 667  Q
     | |||||||||||||| ||||||||||||   |          ||||||| |||||||||||||||||||| ||| |||||||| |||| |||||||||    
T  2754845 accggaaatcatggggtagtgggtgttatgtattttttttttttatgaaagattaataaatgagactgaaatttaaaggtgattattgtgccatgtcatt 2754944  T
Q  668 cttaaatttttcttgataaaatcattcttgatatcta 704  Q
    ||||||| |||||| ||||||| ||||||||||||||    
T  2754945 cttaaatctttctt-ataaaatgattcttgatatcta 2754980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 473 - 704
Target Start/End: Original strand, 37522083 - 37522314
Alignment:
Q  473 tcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctggc 572  Q
    ||||||||| || ||||||||||||  |||||||||||||| | ||||||| |||||||  |  ||| ||||||||||  |||||||||||||  |||||    
T  37522083 tcaagaaaattttaagaatgacatgacagaataatcaccctaagattttataaagaaatagtcatgaaattaatgttaaccaataaaatctcaacctggc 37522182  T
Q  573 tggaaatcatggggtggtgggtgttatgtgnnnnnnnnn-atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattctta 671  Q
     |||||| |||||||||||||||||||||           ||||||| |||||||||||||||||||||||| |||||||| | || |||||||||||||    
T  37522183 cggaaattatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattatgccatgtcattctta 37522282  T
Q  672 aatttttcttgataaaatcattcttgatatcta 704  Q
    |||||||||| ||||||||||||||||||||||    
T  37522283 aatttttctt-ataaaatcattcttgatatcta 37522314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 500 - 670
Target Start/End: Original strand, 42297921 - 42298090
Alignment:
Q  500 agaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctggctggaaatcatggggtggtgggtgttat 599  Q
    |||||||||||||||| |||||||||||||||  | |||| ||||||||||| |||||||||||||||||||| ||||||||||||||||| | ||||||    
T  42297921 agaataatcacccttagattttatcaagaaatagtcctgaaattaatgttagccaataaaatctcagtctggccggaaatcatggggtggtagatgttat 42298020  T
Q  600 gtgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattctt 670  Q
    ||          ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  42298021 gt-attttttttatgaaaggttaataaatgagactgaaatctaagggtggttattgtgtcatgtcattctt 42298090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 471 - 704
Target Start/End: Original strand, 48160933 - 48161167
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctg 570  Q
    ||||||||||| || |||||||| |||| |||||||||||||||| |||||||||||||||  |  ||| |||||| |||| |||||||||||||| ||     
T  48160933 tatcaagaaaattttaagaatgatatggcagaataatcacccttagattttatcaagaaatagtcttgaaattaatattagccaataaaatctcagccta 48161032  T
Q  571 gctggaaatcatggggtggtgggtgttatg--tgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattc 668  Q
    || ||||| |||||||||||||||||||||  |          ||||||  |||||||||||||||||||||||| |||||||| ||||||||||| |||    
T  48161033 gccggaaaccatggggtggtgggtgttatgtatttttttttttatgaaaaattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcgttc 48161132  T
Q  669 ttaaatttttcttgataaaatcattcttgatatcta 704  Q
    ||  || |||||| ||||||||||||||||||||||    
T  48161133 ttggatatttctt-ataaaatcattcttgatatcta 48161167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 471 - 704
Target Start/End: Original strand, 24343575 - 24343811
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctg 570  Q
    ||||||||||||||||| | | | |||| ||||||||||| |||| |||||||||||||||| ||| || ||||||||||| |||||||||||||  |||    
T  24343575 tatcaagaaaaattcaaaattaatatggcagaataatcactcttagattttatcaagaaattgttccgaaattaatgttagccaataaaatctcatcctg 24343674  T
Q  571 gctggaaatcatggggtggtgggtgttatg---tgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcatt 667  Q
     | | ||||||| |||||||||||||||||   |           |||||||||||||||| |||||||||||||||||||||||   | ||||||||||    
T  24343675 accgaaaatcatcgggtggtgggtgttatgtattttttttttttttgaaaggttaataaataagactgaaatctaagggtgattatcatatcatgtcatt 24343774  T
Q  668 cttaaatttttcttgataaaatcattcttgatatcta 704  Q
    ||| ||| ||| |||||||||||||||||||||||||    
T  24343775 cttgaatcttttttgataaaatcattcttgatatcta 24343811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 471 - 704
Target Start/End: Complemental strand, 8320621 - 8320386
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctg 570  Q
    ||||||||||| || |||||||| |||| | |||||||||||||| |||||||||||||||  |  ||| ||||||||||| |||||||||||||| |||    
T  8320621 tatcaagaaaattttaagaatgatatggcaaaataatcacccttaaattttatcaagaaatagtcttgaaattaatgttagccaataaaatctcagcctg 8320522  T
Q  571 gctggaaatcat-ggggtggtgggtgttatg--tgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcatt 667  Q
    ||  |||||||| ||||| ||||||||||||  |          ||||||| |||||||||||||||||||||||| |||||||| |||| |||||||||    
T  8320521 gccagaaatcatgggggtagtgggtgttatgtatttttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcatt 8320422  T
Q  668 cttaaatttttcttgataaaatcattcttgatatcta 704  Q
    ||| ||| |||||| ||||||||||| ||||||||||    
T  8320421 cttgaatctttctt-ataaaatcattattgatatcta 8320386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 471 - 601
Target Start/End: Original strand, 30385039 - 30385169
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctg 570  Q
    ||||||||||| ||||| |||||||||| ||||||||||||||||||||||||||||||||  | |||| ||||||||||  |||||||||||||| |||    
T  30385039 tatcaagaaaatttcaaaaatgacatggcagaataatcacccttatattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctg 30385138  T
Q  571 gctggaaatcatggggtggtgggtgttatgt 601  Q
    || ||||||||||||||||||||||||||||    
T  30385139 gccggaaatcatggggtggtgggtgttatgt 30385169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 517 - 704
Target Start/End: Original strand, 40327899 - 40328093
Alignment:
Q  517 attttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctggctggaaatcatggggtggtgggtgttatgtgnnnnnnnnn----- 611  Q
    |||||||||||||||| | |||| ||||||||||| |||||||||||||  ||||| ||||||||| ||||||||||||||||||                   
T  40327899 attttatcaagaaattgtcctgaaattaatgttagccaataaaatctcaacctggccggaaatcatagggtggtgggtgttatgtattttatttttattt 40327998  T
Q  612 --atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 704  Q
      || |||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||| ||| |||||||||||||||||||||||||||||    
T  40327999 ttatcaaaggtaaataaataagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgatatcta 40328093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 473 - 704
Target Start/End: Original strand, 41224263 - 41224495
Alignment:
Q  473 tcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctggc 572  Q
    |||||||||||||||||||||||||||||||| |||||||||  ||||||| |||||||| |  ||| |||||||||||  ||||||||||| ||  ||     
T  41224263 tcaagaaaaattcaagaatgacatggtagaattatcacccttgaattttattaagaaattgtattgaaattaatgttagctaataaaatctctgttgggt 41224362  T
Q  573 tggaaatcatggggtggtgggtgttatg----tgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattc 668  Q
     |||||||||||||||||||||||||||    |          |||||||   ||||||||||| |||||| |||||||||||| |||| ||||||||||    
T  41224363 cggaaatcatggggtggtgggtgttatgtatttttttttttttatgaaag--aaataaatgagattgaaatttaagggtgattattgtgccatgtcattc 41224460  T
Q  669 ttaaatttttcttgataaaatcattcttgatatcta 704  Q
    || ||| ||||||||| |||||||||||||||||||    
T  41224461 ttgaatatttcttgat-aaatcattcttgatatcta 41224495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 473 - 594
Target Start/End: Complemental strand, 34482945 - 34482824
Alignment:
Q  473 tcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctggc 572  Q
    ||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||  | |||| ||||||||||  |||||||||||||| |||||    
T  34482945 tcaagaaaatttcaagaatgatatggtagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctggc 34482846  T
Q  573 tggaaatcatggggtggtgggt 594  Q
     |||||||||||||||||||||    
T  34482845 cggaaatcatggggtggtgggt 34482824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 471 - 601
Target Start/End: Original strand, 42297381 - 42297512
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatgg-tagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtct 569  Q
    ||||||||||| || ||||||||||||  ||||||||||||||||| |||||||||||||||  |||||| ||||||||||| |||||||||||||| ||    
T  42297381 tatcaagaaaattttaagaatgacatgactagaataatcacccttagattttatcaagaaatagttctgaaattaatgttagccaataaaatctcagcct 42297480  T
Q  570 ggctggaaatcatggggtggtgggtgttatgt 601  Q
    | | ||||||||||||||||||| ||||||||    
T  42297481 gaccggaaatcatggggtggtggatgttatgt 42297512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 471 - 601
Target Start/End: Original strand, 11347296 - 11347426
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctg 570  Q
    ||||||||||| || ||||||||||||| |||||||| ||||||| ||||||||| |||||  | |||| ||||||||||| ||||||||||||||  ||    
T  11347296 tatcaagaaaattttaagaatgacatggcagaataataacccttagattttatcaggaaatagtcctgaaattaatgttagccaataaaatctcagagtg 11347395  T
Q  571 gctggaaatcatggggtggtgggtgttatgt 601  Q
    ||| |||||||||||||||||||||||||||    
T  11347396 gctagaaatcatggggtggtgggtgttatgt 11347426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 612 - 704
Target Start/End: Original strand, 42921295 - 42921387
Alignment:
Q  612 atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 704  Q
    |||||||||||||||||||||||||||| |||||||||||  |||| |||||||||||||||| ||||||||||||||||||||| |||||||    
T  42921295 atgaaaggttaataaatgagactgaaatttaagggtgattgttgtgccatgtcattcttaaatatttcttgataaaatcattcttaatatcta 42921387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 568 - 701
Target Start/End: Original strand, 30385526 - 30385658
Alignment:
Q  568 ctggctggaaatcatggggtggtgggtgttatgtgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcatt 667  Q
    ||||| ||||||||||||||||||||||||||||          ||||||| |||||||||||||||||||||||| |||||||| |||| |||||||||    
T  30385526 ctggccggaaatcatggggtggtgggtgttatgtatttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcatt 30385625  T
Q  668 cttaaatttttcttgataaaatcattcttgatat 701  Q
    ||| ||| |||||| |||||||||||||||||||    
T  30385626 cttgaatctttctt-ataaaatcattcttgatat 30385658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 612 - 704
Target Start/End: Original strand, 26612916 - 26613008
Alignment:
Q  612 atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 704  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| ||||| |||||| ||| |||||| ||||||||||| ||||||||||    
T  26612916 atgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgttattcttgaatctttcttaataaaatcattattgatatcta 26613008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 612 - 704
Target Start/End: Complemental strand, 34482783 - 34482692
Alignment:
Q  612 atgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatatcta 704  Q
    ||||||| |||||||||||||||||||||||| |||||||| |||| |||||||||||| |||||||||| ||||||||||||||||||||||    
T  34482783 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatcta 34482692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 461 - 704
Target Start/End: Original strand, 46918920 - 46919156
Alignment:
Q  461 caatgatatatatcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaa 560  Q
    ||||| ||||||| |||||| ||| || ||||| ||| ||||||||| ||| ||| |||||||||||||||| |   || |||||||||||  |||||||    
T  46918920 caatgctatatattaagaaatatttaaaaatgatatgatagaataattacctttagattttatcaagaaattgtctcgaaattaatgttagcaaataaaa 46919019  T
Q  561 tctcagtctggctggaaatcatggggtggtgggtgttatgtgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtca 660  Q
    | |     |||||||||||||||||||||||| |||||| |          |||| || ||||||||| |||| ||||||||  |||||||| | || ||    
T  46919020 tgt-----tggctggaaatcatggggtggtggatgttatat--atatatttatgatagattaataaataagaccgaaatctagaggtgattattctgcca 46919112  T
Q  661 tgtcattcttaaatttttcttgataaaatcattcttgatatcta 704  Q
    ||||||| || ||| ||| |||||||||||||||||||||||||    
T  46919113 tgtcattattgaatcttttttgataaaatcattcttgatatcta 46919156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 636 - 701
Target Start/End: Original strand, 3574515 - 3574580
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    ||||||||||||||||| | || ||||||||||||||| |||||||||||||||| ||||||||||    
T  3574515 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatat 3574580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 636 - 701
Target Start/End: Complemental strand, 6041961 - 6041896
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    ||||||||||||||||| | ||||||||||||||| || |||||||||||||||| ||||||||||    
T  6041961 aaatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatat 6041896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 636 - 701
Target Start/End: Complemental strand, 42297431 - 42297365
Alignment:
Q  636 aaatctaagggtgattactgt-gtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    ||||||||||||||||| | | ||||||||||||||||| |||||||||||||||| ||||||||||    
T  42297431 aaatctaagggtgattattctagtcatgtcattcttaaaattttcttgataaaatctttcttgatat 42297365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 636 - 701
Target Start/End: Complemental strand, 2754794 - 2754729
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    |||||||| |||||||| | || ||||||||||||||| |||||||||||||||| ||||||||||    
T  2754794 aaatctaaaggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatat 2754729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 636 - 701
Target Start/End: Complemental strand, 3456141 - 3456076
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    ||||||||||||||||| | || ||| ||||||||||| |||||||||||||||| ||||||||||    
T  3456141 aaatctaagggtgattattctgccatatcattcttaaaattttcttgataaaatctttcttgatat 3456076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 636 - 701
Target Start/End: Complemental strand, 11347345 - 11347280
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    |||||||||||| |||| | || ||||||||||||||| |||||||||||||||| ||||||||||    
T  11347345 aaatctaagggttattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatat 11347280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 636 - 701
Target Start/End: Original strand, 37217041 - 37217106
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    |||| |||||||||||| | || ||||||||||||||| |||||||||||||||| ||||||||||    
T  37217041 aaatttaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatat 37217106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 636 - 701
Target Start/End: Complemental strand, 37522130 - 37522065
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    |||||| |||||||||| | |||||||||||||||||| ||||||||| |||||| ||||||||||    
T  37522130 aaatcttagggtgattattctgtcatgtcattcttaaaattttcttgaaaaaatctttcttgatat 37522065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 636 - 701
Target Start/End: Complemental strand, 48160982 - 48160917
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    ||||||||||||||||| | || ||| ||||||||||| |||||||||||||||| ||||||||||    
T  48160982 aaatctaagggtgattattctgccatatcattcttaaaattttcttgataaaatctttcttgatat 48160917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 636 - 701
Target Start/End: Original strand, 3137402 - 3137467
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    ||||||||||||||||| | || |||||||||||| || ||||||||| |||||| ||||||||||    
T  3137402 aaatctaagggtgattattttgccatgtcattcttgaaattttcttgaaaaaatctttcttgatat 3137467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 636 - 701
Target Start/End: Original strand, 8320572 - 8320637
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    |||| |||||||||||| | || ||| ||||||||||| |||||||||||||||| ||||||||||    
T  8320572 aaatttaagggtgattattttgccatatcattcttaaaattttcttgataaaatctttcttgatat 8320637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 636 - 701
Target Start/End: Original strand, 9797017 - 9797082
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    |||||||| |||||||| | || |||||||||||| |||||||||||| |||||| ||||||||||    
T  9797017 aaatctaatggtgattattctgccatgtcattcttgaatttttcttgagaaaatctttcttgatat 9797082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 636 - 701
Target Start/End: Original strand, 19650888 - 19650953
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    |||||||| |||||||| | || ||||||||||||||| |||||||||||||||| ||||| ||||    
T  19650888 aaatctaatggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttaatat 19650953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 636 - 701
Target Start/End: Original strand, 22426332 - 22426397
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    ||||||||||||||||| | || ||||||||| ||||| |||||||||||||||| ||||| ||||    
T  22426332 aaatctaagggtgattattctgccatgtcatttttaaaattttcttgataaaatctttcttaatat 22426397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 636 - 701
Target Start/End: Complemental strand, 33839608 - 33839543
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    |||||||| |||||||| | |||||||| |||||||||||||| ||||||||||| ||||| ||||    
T  33839608 aaatctaatggtgattattctgtcatgttattcttaaattttttttgataaaatctttcttaatat 33839543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 657 - 701
Target Start/End: Complemental strand, 42921199 - 42921155
Alignment:
Q  657 gtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    ||||||||||||||||| |||||||||||||||| ||||||||||    
T  42921199 gtcatgtcattcttaaaattttcttgataaaatctttcttgatat 42921155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 471 - 566
Target Start/End: Original strand, 42921171 - 42921266
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcag 566  Q
    ||||||||||| || ||||||||||||   |||| ||  || ||| |||||||||||||||| | ||||  |||||||||| ||||||||||||||    
T  42921171 tatcaagaaaattttaagaatgacatgaccgaatgattgcctttagattttatcaagaaattgtcctgaatttaatgttagccaataaaatctcag 42921266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 636 - 701
Target Start/End: Complemental strand, 33113870 - 33113805
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    ||||||||||||||||| | || ||||| |||||| || ||||||| |||||||| ||||||||||    
T  33113870 aaatctaagggtgattattctgccatgtaattcttgaaattttcttaataaaatctttcttgatat 33113805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 636 - 701
Target Start/End: Complemental strand, 33145789 - 33145725
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    ||||||||||||||||| | || ||||||||||||||| |||| || |||||||| ||||||||||    
T  33145789 aaatctaagggtgattattctgccatgtcattcttaaaatttt-ttaataaaatctttcttgatat 33145725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 471 - 520
Target Start/End: Complemental strand, 41224477 - 41224428
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatattt 520  Q
    |||||||||| ||||||||||||||||| | |||||||||||||| ||||    
T  41224477 tatcaagaaatattcaagaatgacatggcacaataatcacccttaaattt 41224428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 636 - 700
Target Start/End: Complemental strand, 30385088 - 30385024
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgata 700  Q
    |||| |||||||||||| | || ||||||||| || || |||||||||||||||| |||||||||    
T  30385088 aaatataagggtgattattctgccatgtcatttttgaaattttcttgataaaatctttcttgata 30385024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 636 - 683
Target Start/End: Original strand, 8362033 - 8362080
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttga 683  Q
    ||||||||||||||||| | || |||||||||||| ||||||||||||    
T  8362033 aaatctaagggtgattattctgccatgtcattcttgaatttttcttga 8362080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 475 - 520
Target Start/End: Original strand, 3137240 - 3137285
Alignment:
Q  475 aagaaaaattcaagaatgacatggtagaataatcacccttatattt 520  Q
    |||||||||||||||||||||||| | |||||||||| ||| ||||    
T  3137240 aagaaaaattcaagaatgacatggcacaataatcacctttagattt 3137285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 471 - 520
Target Start/End: Original strand, 8361861 - 8361910
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatattt 520  Q
    |||||||||| ||||||||||||||||  | |||||||||||||| ||||    
T  8361861 tatcaagaaatattcaagaatgacatgacacaataatcacccttagattt 8361910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 471 - 520
Target Start/End: Complemental strand, 33839778 - 33839729
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatattt 520  Q
    |||||||||| ||||||||||||||||  | |||||||||||||| ||||    
T  33839778 tatcaagaaagattcaagaatgacatgacacaataatcacccttaaattt 33839729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 475 - 520
Target Start/End: Original strand, 34482714 - 34482759
Alignment:
Q  475 aagaaaaattcaagaatgacatggtagaataatcacccttatattt 520  Q
    |||||||||||||||||||||||| | |||||||||| ||| ||||    
T  34482714 aagaaaaattcaagaatgacatggcacaataatcacctttagattt 34482759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 636 - 701
Target Start/End: Original strand, 34482898 - 34482963
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    ||||||||||||||||| | |  ||| |||||||| || ||||||||| |||||| ||||||||||    
T  34482898 aaatctaagggtgattattctaccatatcattcttgaaattttcttgaaaaaatctttcttgatat 34482963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 475 - 520
Target Start/End: Original strand, 37216879 - 37216924
Alignment:
Q  475 aagaaaaattcaagaatgacatggtagaataatcacccttatattt 520  Q
    |||||| ||||||||||||||||||| |||||||||| ||| ||||    
T  37216879 aagaaagattcaagaatgacatggtacaataatcacctttagattt 37216924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 471 - 520
Target Start/End: Complemental strand, 40328074 - 40328025
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatattt 520  Q
    |||||||||| ||||||||||||||||  | |||||||||||||| ||||    
T  40328074 tatcaagaaagattcaagaatgacatgacacaataatcacccttagattt 40328025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 636 - 685
Target Start/End: Original strand, 41883211 - 41883260
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgata 685  Q
    |||| |||||||||||| | || |||||||||||| ||||||||||||||    
T  41883211 aaatttaagggtgattattctgccatgtcattcttgaatttttcttgata 41883260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 703 - 760
Target Start/End: Complemental strand, 42380797 - 42380740
Alignment:
Q  703 tactccctctgtccctatatgtaagcacctttttattagaggaaaagattgcttacat 760  Q
    |||||||||||||||||||| |||  ||| |||||||||||| ||||  |||||||||    
T  42380797 tactccctctgtccctatatctaataacccttttattagaggcaaaggatgcttacat 42380740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 703 - 760
Target Start/End: Complemental strand, 42409511 - 42409454
Alignment:
Q  703 tactccctctgtccctatatgtaagcacctttttattagaggaaaagattgcttacat 760  Q
    |||||||||||||||||||| |||  ||| |||||||||||| ||||  |||||||||    
T  42409511 tactccctctgtccctatatctaataacccttttattagaggcaaaggatgcttacat 42409454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 636 - 701
Target Start/End: Complemental strand, 47738182 - 47738117
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    |||||||| ||| |||| | || ||| |||||||| ||| ||||||||||||||| ||||||||||    
T  47738182 aaatctaaaggtaattattctgccatatcattcttgaatatttcttgataaaatctttcttgatat 47738117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 471 - 520
Target Start/End: Complemental strand, 47738354 - 47738305
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatattt 520  Q
    |||||||||| ||||||||||||||||| | |||||||| ||||| ||||    
T  47738354 tatcaagaaagattcaagaatgacatggcacaataatcatccttagattt 47738305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 114; Significance: 3e-57; HSPs: 2)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 114; E-Value: 3e-57
Query Start/End: Original strand, 473 - 704
Target Start/End: Original strand, 4426 - 4657
Alignment:
Q  473 tcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctggc 572  Q
    ||||||||| || ||||||||||||| |||||||||||||||| |||||||||||||||  | |||| ||||||||||  |||||||||||||| |||||    
T  4426 tcaagaaaattttaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctggc 4525  T
Q  573 tggaaatcatggggtggtgggtgttatgt-gnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattctta 671  Q
     | ||||||||||||||||||||||||||           ||||||| |||||||||||||||||||||||| |||||||| |||| ||| |||||||||    
T  4526 cgaaaatcatggggtggtgggtgttatgtatctgttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatatcattctta 4625  T
Q  672 aatttttcttgataaaatcattcttgatatcta 704  Q
    |||||||||| ||||||||||||||||||||||    
T  4626 aatttttctt-ataaaatcattcttgatatcta 4657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 636 - 701
Target Start/End: Complemental strand, 4473 - 4408
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    ||||||||||||||||| | || ||||||||||||||| ||||||||| |||||| ||||||||||    
T  4473 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatat 4408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 112; Significance: 4e-56; HSPs: 2)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 471 - 704
Target Start/End: Original strand, 11649 - 11882
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctg 570  Q
    ||||||||||| |||||||||||||||  |||||||||||||||| |||||||||||||||  |  ||| ||||||||||  |||||||||||||| |||    
T  11649 tatcaagaaaatttcaagaatgacatgacagaataatcacccttagattttatcaagaaatagtcatgaaattaatgttaaccaataaaatctcagcctg 11748  T
Q  571 gctggaaatcatggggtggtgggtgttatgt-gnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattct 669  Q
    || | |||||||||||||||| |||||||||           ||||||| |||||||||||||||||||||||| |||||||| |||| |||||||||||    
T  11749 gccgaaaatcatggggtggtgagtgttatgtattttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattct 11848  T
Q  670 taaatttttcttgataaaatcattcttgatatcta 704  Q
    |||||||||||| ||||||||||||||||||||||    
T  11849 taaatttttctt-ataaaatcattcttgatatcta 11882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178; HSP #2
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 636 - 701
Target Start/End: Complemental strand, 11698 - 11633
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    ||||||||||||||||| | ||||||||||||||| || |||||||||||||||| ||||||||||    
T  11698 aaatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatat 11633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 111; Significance: 2e-55; HSPs: 2)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 471 - 704
Target Start/End: Original strand, 41039 - 41271
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctg 570  Q
    |||||| |||| |||||||||||||||| |||||||||||||||| |||||||||||||||  |  ||| ||||||||||| |||||||||||||| |||    
T  41039 tatcaaaaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcttgaaattaatgttagccaataaaatctcagcctg 41138  T
Q  571 gctggaaatcatggggtggtgggtgttatgtgnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattactgtgtcatgtcattctt 670  Q
    || ||||||||||||||||||||||||||||          ||||||| |||||||||||||||||||||||| |||||||| |||  ||| ||||||||    
T  41139 gccggaaatcatggggtggtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtaccatatcattctt 41238  T
Q  671 aaatttttcttgataaaatcattcttgatatcta 704  Q
      || |||||| ||||||||||||||||||||||    
T  41239 ggatctttctt-ataaaatcattcttgatatcta 41271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096; HSP #2
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 636 - 701
Target Start/End: Complemental strand, 41088 - 41023
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    ||||||||||||||||| | || |||||||||||| || |||| ||||||||||| ||||||||||    
T  41088 aaatctaagggtgattattctgccatgtcattcttgaaatttttttgataaaatctttcttgatat 41023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 65; Significance: 4e-28; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 471 - 587
Target Start/End: Original strand, 85454 - 85570
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctg 570  Q
    |||||||||||| ||||||||||||||| |||||||||| ||||| ||||||| |||||||||| |||| ||||||||||| ||||||||||| || |||    
T  85454 tatcaagaaaaactcaagaatgacatggcagaataatcatccttaaattttatgaagaaattatcctgaaattaatgttagccaataaaatcttagcctg 85553  T
Q  571 gctggaaatcatggggt 587  Q
    |  | ||||||||||||    
T  85554 gtcgaaaatcatggggt 85570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0665 (Bit Score: 55; Significance: 4e-22; HSPs: 2)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 471 - 601
Target Start/End: Original strand, 3096 - 3221
Alignment:
Q  471 tatcaagaaaaattcaagaatgacatggtagaataatcacccttatattttatcaagaaattattctgatattaatgttagtcaataaaatctcagtctg 570  Q
    |||||| |||| || ||||||||||||| |||||||||||||||| |||||||||||||||  |  ||| ||||||||||| |||||||||||||         
T  3096 tatcaataaaattttaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcttgaaattaatgttagccaataaaatctca----- 3190  T
Q  571 gctggaaatcatggggtggtgggtgttatgt 601  Q
    || | ||||||| ||||||||||||||||||    
T  3191 gccgaaaatcatagggtggtgggtgttatgt 3221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0665; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 636 - 701
Target Start/End: Complemental strand, 3145 - 3080
Alignment:
Q  636 aaatctaagggtgattactgtgtcatgtcattcttaaatttttcttgataaaatcattcttgatat 701  Q
    ||||||||||||||||| | || ||||||||||||||| |||| ||||||||||| ||||||||||    
T  3145 aaatctaagggtgattattctgccatgtcattcttaaaattttattgataaaatctttcttgatat 3080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 36; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 704 - 743
Target Start/End: Complemental strand, 504665 - 504626
Alignment:
Q  704 actccctctgtccctatatgtaagcacctttttattagag 743  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  504665 actccctccgtccctatatgtaagcacctttttattagag 504626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 703 - 760
Target Start/End: Original strand, 143351 - 143408
Alignment:
Q  703 tactccctctgtccctatatgtaagcacctttttattagaggaaaagattgcttacat 760  Q
    |||| ||||||||||||||||||| |||| |||||||||||| ||||  |||||||||    
T  143351 tacttcctctgtccctatatgtaaacacccttttattagaggcaaaggatgcttacat 143408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 703 - 744
Target Start/End: Complemental strand, 59475 - 59434
Alignment:
Q  703 tactccctctgtccctatatgtaagcacctttttattagagg 744  Q
    |||||||||  |||||||||||||||||| ||||||||||||    
T  59475 tactccctccatccctatatgtaagcacccttttattagagg 59434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University