View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF11732_low_16 (Length: 371)
Name: NF11732_low_16
Description: NF11732
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11732_low_16 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 336; Significance: 0; HSPs: 16)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 336; E-Value: 0
Query Start/End: Original strand, 18 - 361
Target Start/End: Complemental strand, 4652751 - 4652408
Alignment:
| Q |
18 |
ctaataaccagcccttaccgtggaagaagaggcttgagattctattgggttccgcgagagggctgaattatcttcatgctgaggtgaaacacaagataat |
117 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
4652751 |
ctaataaccagcccttaccgtggaagaagaggcttgagattctattgggttccgcgagagggctgaattatcttcatgcagaggtgaaacacaagataat |
4652652 |
T |
|
| Q |
118 |
acaccgtgacgtgaagagcaccaacatattgttggatgagaaatgggtggctaaggtttctgattttggattatcgaaagtgggaccgacagggatgtct |
217 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
4652651 |
acaccgtgacgtgaagagcaccaacatattgttggatgagaaatgggtggctaaggtttctgattttggattatcgaaagtgggaccgacaaggatgtct |
4652552 |
T |
|
| Q |
218 |
acaacccatgttagcacgatggtgaagggtagcctagggtatttggatccagaatattatatgctccaaaggctaactctaaaatctgatgtgtactcat |
317 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4652551 |
acaacccatgttagcacgatggtgaagggtagcctagggtatttggatccagaatattatatgctccaaaggctaactctaaaatctgatgtgtactcat |
4652452 |
T |
|
| Q |
318 |
tcggtgtggtgcttcttgaggtgttgtgtgctagaccacctttg |
361 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4652451 |
tcggtgtggtgcttcttgaggtgttgtgtgctagaccacctttg |
4652408 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 18 - 361
Target Start/End: Complemental strand, 4666166 - 4665823
Alignment:
| Q |
18 |
ctaataaccagcccttaccgtggaagaagaggcttgagattctattgggttccgcgagagggctgaattatcttcatgctgaggtgaaacacaagataat |
117 |
Q |
| |
|
|||||||||||||| || | |||||| |||||||||||||||| |||||| | |||||||||||||||||||||||| ||||||||||||| |||||||| |
|
|
| T |
4666166 |
ctaataaccagcccctatcatggaagcagaggcttgagattcttttgggtgcagcgagagggctgaattatcttcatactgaggtgaaacagaagataat |
4666067 |
T |
|
| Q |
118 |
acaccgtgacgtgaagagcaccaacatattgttggatgagaaatgggtggctaaggtttctgattttggattatcgaaagtgggaccgacagggatgtct |
217 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||| |||| |||||||| || ||||| ||||| || ||||||||||||||||| || |
|
|
| T |
4666066 |
acaccgtgacgtgaagagcaccaacatattgttggatgaaaaatggatggcaaaggtttccgactttgggttatccaaggtgggaccgacagggatatca |
4665967 |
T |
|
| Q |
218 |
acaacccatgttagcacgatggtgaagggtagcctagggtatttggatccagaatattatatgctccaaaggctaactctaaaatctgatgtgtactcat |
317 |
Q |
| |
|
|| |||||||| ||||||||||||||||| ||||| || ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
4665966 |
actacccatgtcagcacgatggtgaaggggagcctcggatatttggatcccgaatattatatgctccaaaggctaactctaaaatctgatgtgtactcgt |
4665867 |
T |
|
| Q |
318 |
tcggtgtggtgcttcttgaggtgttgtgtgctagaccacctttg |
361 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4665866 |
tcggtgtggtgcttcttgaggtgttgtgtgctagaccacctttg |
4665823 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 20 - 361
Target Start/End: Complemental strand, 4630138 - 4629797
Alignment:
| Q |
20 |
aataaccagcccttaccgtggaagaagaggcttgagattctattgggttccgcgagagggctgaattatcttcatgctgaggtgaaacacaagataatac |
119 |
Q |
| |
|
||||| |||||| |||| |||||| ||||||||||||| ||||||||| | |||||||||||||||||||||||| |||||||||| ||||||||||||| |
|
|
| T |
4630138 |
aataatcagcccctaccatggaagcagaggcttgagatcctattgggtgcagcgagagggctgaattatcttcattctgaggtgaagcacaagataatac |
4630039 |
T |
|
| Q |
120 |
accgtgacgtgaagagcaccaacatattgttggatgagaaatgggtggctaaggtttctgattttggattatcgaaagtgggaccgacagggatgtctac |
219 |
Q |
| |
|
| |||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||| || ||||| || |||||||| ||||| || | || |
|
|
| T |
4630038 |
atcgtgacgtaaagagcaccaacatactgttggatgagaaatgggtagctaaggtttctgatttcgggttatccaaggtgggacctacaggaataacgac |
4629939 |
T |
|
| Q |
220 |
aacccatgttagcacgatggtgaagggtagcctagggtatttggatccagaatattatatgctccaaaggctaactctaaaatctgatgtgtactcattc |
319 |
Q |
| |
|
|||||||| ||||||||||||||||| ||||| || ||||||||||| ||||| |||||||||||||||||||||||||||||||| |||||||| || |
|
|
| T |
4629938 |
tacccatgtcagcacgatggtgaaggggagccttggatatttggatcccgaatactatatgctccaaaggctaactctaaaatctgacgtgtactcgttt |
4629839 |
T |
|
| Q |
320 |
ggtgtggtgcttcttgaggtgttgtgtgctagaccacctttg |
361 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4629838 |
ggtgtggtgcttcttgaggtgttgtgtgctagaccacctttg |
4629797 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 18 - 357
Target Start/End: Complemental strand, 4661035 - 4660693
Alignment:
| Q |
18 |
ctaataaccagcccttaccgtggaagaagaggcttgagattctattgggttccgcgagagggctgaattatcttcatgctgaggtgaaacacaagataat |
117 |
Q |
| |
|
|||||||||||||| |||| |||| | | ||||||||||| ||||||||||| || |||||| || |||||||||||||||||||||||||||| ||||| |
|
|
| T |
4661035 |
ctaataaccagcccctaccttggaggcaaaggcttgagatcctattgggttcagcaagagggttgcattatcttcatgctgaggtgaaacacaaaataat |
4660936 |
T |
|
| Q |
118 |
acaccgtgacgtgaagagcaccaacatattgttggatgagaaatgggtggctaaggtttctgattttggattatcgaaagtgggaccgacagggatgtct |
217 |
Q |
| |
|
|||||| ||||| |||||||||||||||||||||||| | |||||||| ||||||||||| || || || ||||| || ||||||||||||||||| || |
|
|
| T |
4660935 |
acaccgcgacgtaaagagcaccaacatattgttggatcacaaatgggtagctaaggtttccgacttcgggttatccaaggtgggaccgacagggatatcg |
4660836 |
T |
|
| Q |
218 |
acaacccat---gttagcacgatggtgaagggtagcctagggtatttggatccagaatattatatgctccaaaggctaactctaaaatctgatgtgtact |
314 |
Q |
| |
|
|| || ||| || ||||| ||||||||||| ||||| |||||||||||||| |||| ||||||||||||||| |||||||||||||||| ||||||| |
|
|
| T |
4660835 |
actactcatcacgtcagcacaatggtgaaggggagccttgggtatttggatccccaatactatatgctccaaaggttaactctaaaatctgaagtgtact |
4660736 |
T |
|
| Q |
315 |
cattcggtgtggtgcttcttgaggtgttgtgtgctagaccacc |
357 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
4660735 |
cgttcggtgtggtgcttcttgaggtgttgtgtgctaggccacc |
4660693 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 18 - 361
Target Start/End: Complemental strand, 4636088 - 4635745
Alignment:
| Q |
18 |
ctaataaccagcccttaccgtggaagaagaggcttgagattctattgggttccgcgagagggctgaattatcttcatgctgaggtgaaacacaagataat |
117 |
Q |
| |
|
|||||||||| ||| |||| |||||| |||||||||| ||||| |||||| | || ||||||||||||||||||||| ||||||| ||| |||||||||| |
|
|
| T |
4636088 |
ctaataaccaacccctaccatggaagcagaggcttgaaattcttttgggtgcagctagagggctgaattatcttcatactgaggttaaaaacaagataat |
4635989 |
T |
|
| Q |
118 |
acaccgtgacgtgaagagcaccaacatattgttggatgagaaatgggtggctaaggtttctgattttggattatcgaaagtgggaccgacagggatgtct |
217 |
Q |
| |
|
||| |||||||| ||||||||||||||||||||||||||||||||| | |||||||||||||||||||| ||||| || |||||||||||||| || || |
|
|
| T |
4635988 |
acatcgtgacgtaaagagcaccaacatattgttggatgagaaatggatagctaaggtttctgattttgggttatcaaaggtgggaccgacaggtatatcg |
4635889 |
T |
|
| Q |
218 |
acaacccatgttagcacgatggtgaagggtagcctagggtatttggatccagaatattatatgctccaaaggctaactctaaaatctgatgtgtactcat |
317 |
Q |
| |
|
|| ||||| || ||||| || || ||||| ||| | |||||||| ||||| || || |||||| |||||||||| ||||| ||||| || |||||||||| |
|
|
| T |
4635888 |
actacccacgtcagcacaattgttaagggaagcttggggtatttagatcctgagtactatatgttccaaaggcttactcttaaatcagacgtgtactcat |
4635789 |
T |
|
| Q |
318 |
tcggtgtggtgcttcttgaggtgttgtgtgctagaccacctttg |
361 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
4635788 |
tcggtgtggtgcttcttgaggtgttgtgtgctaggccacctttg |
4635745 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 18 - 361
Target Start/End: Complemental strand, 4671871 - 4671528
Alignment:
| Q |
18 |
ctaataaccagcccttaccgtggaagaagaggcttgagattctattgggttccgcgagagggctgaattatcttcatgctgaggtgaaacacaagataat |
117 |
Q |
| |
|
|||||||| |||| |||| |||| | ||||||||||||||||||||||| | ||||||||||| ||||||||||||||||||||||| ||||| ||||| |
|
|
| T |
4671871 |
ctaataacgagccactaccttggaggcagaggcttgagattctattgggtgctgcgagagggctaaattatcttcatgctgaggtgaagcacaaaataat |
4671772 |
T |
|
| Q |
118 |
acaccgtgacgtgaagagcaccaacatattgttggatgagaaatgggtggctaaggtttctgattttggattatcgaaagtgggaccgacagggatgtct |
217 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||||||||||||| | ||||||||||| || || || ||||| || |||||||| || ||||| | |
|
|
| T |
4671771 |
acatcgtgacgtgaagagcaccaacatattgttggatgagaaatggatagctaaggtttccgacttcgggttatccaaggtgggacccacggggataaca |
4671672 |
T |
|
| Q |
218 |
acaacccatgttagcacgatggtgaagggtagcctagggtatttggatccagaatattatatgctccaaaggctaactctaaaatctgatgtgtactcat |
317 |
Q |
| |
|
|| ||||| || ||||| |||||||| || ||||| |||||||| ||||| || || |||||| |||||||||||||||||||||| ||||||||||||| |
|
|
| T |
4671671 |
actacccacgtcagcacaatggtgaaaggaagccttgggtatttagatcctgagtactatatgttccaaaggctaactctaaaatcagatgtgtactcat |
4671572 |
T |
|
| Q |
318 |
tcggtgtggtgcttcttgaggtgttgtgtgctagaccacctttg |
361 |
Q |
| |
|
|||||||||| |||||||| |||||||||||||| ||||||||| |
|
|
| T |
4671571 |
tcggtgtggtacttcttgaagtgttgtgtgctaggccacctttg |
4671528 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 18 - 361
Target Start/End: Complemental strand, 4642935 - 4642592
Alignment:
| Q |
18 |
ctaataaccagcccttaccgtggaagaagaggcttgagattctattgggttccgcgagagggctgaattatcttcatgctgaggtgaaacacaagataat |
117 |
Q |
| |
|
|||||||| |||| |||| |||| | |||||||||| |||||||| ||| |||| |||||||||||||||||||||||||||||||| ||||| ||||| |
|
|
| T |
4642935 |
ctaataacgagccactaccttggaggcagaggcttgaaattctattaggtgccgcaagagggctgaattatcttcatgctgaggtgaagcacaaaataat |
4642836 |
T |
|
| Q |
118 |
acaccgtgacgtgaagagcaccaacatattgttggatgagaaatgggtggctaaggtttctgattttggattatcgaaagtgggaccgacagggatgtct |
217 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||||||| |||||| | ||||||||||| || || || ||||| || |||||||| |||||||| || |
|
|
| T |
4642835 |
acatcgtgacgtgaagagcaccaacatattgttggatgaaaaatggatagctaaggtttccgacttcgggttatccaaggtgggacctacagggatatcg |
4642736 |
T |
|
| Q |
218 |
acaacccatgttagcacgatggtgaagggtagcctagggtatttggatccagaatattatatgctccaaaggctaactctaaaatctgatgtgtactcat |
317 |
Q |
| |
|
|| ||||| | ||||| |||||||| || ||||| |||||||| ||||| || || |||||| |||||||||||||||||||||| ||||||||||| | |
|
|
| T |
4642735 |
actacccacatcagcacaatggtgaaaggaagccttgggtatttagatcctgagtactatatgttccaaaggctaactctaaaatcagatgtgtactcgt |
4642636 |
T |
|
| Q |
318 |
tcggtgtggtgcttcttgaggtgttgtgtgctagaccacctttg |
361 |
Q |
| |
|
|||||||||| |||||||| |||||||||||||| ||||||||| |
|
|
| T |
4642635 |
tcggtgtggtacttcttgaagtgttgtgtgctaggccacctttg |
4642592 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 161; E-Value: 9e-86
Query Start/End: Original strand, 38 - 354
Target Start/End: Original strand, 4784740 - 4785056
Alignment:
| Q |
38 |
tggaagaagaggcttgagattctattgggttccgcgagagggctgaattatcttcatgctgaggtgaaacacaagataatacaccgtgacgtgaagagca |
137 |
Q |
| |
|
|||||| ||||||||||||||||||| ||| ||||| | ||| || ||||||| ||||| | | ||| ||||| || |||||||||||||||||||| | |
|
|
| T |
4784740 |
tggaagcagaggcttgagattctattaggtgccgcgcgggggttgcattatctgcatgcaggtgcgaagcacaatatcatacaccgtgacgtgaagagta |
4784839 |
T |
|
| Q |
138 |
ccaacatattgttggatgagaaatgggtggctaaggtttctgattttggattatcgaaagtgggaccgacagggatgtctacaacccatgttagcacgat |
237 |
Q |
| |
|
| ||||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||| | |||||||| ||||| || |
|
|
| T |
4784840 |
caaacatattgttggatgaaaaatgggtggctaaggtttctgattttgggttatcaaaagtgggacctacagggatgtcgatgacccatgtcagcactat |
4784939 |
T |
|
| Q |
238 |
ggtgaagggtagcctagggtatttggatccagaatattatatgctccaaaggctaactctaaaatctgatgtgtactcattcggtgtggtgcttcttgag |
337 |
Q |
| |
|
|||||| ||||| || |||||||||||||||||||| || |||| |||||| | |||||||| |||||||||||||| |||||||| |||||||||||| |
|
|
| T |
4784940 |
ggtgaaaggtagtctcgggtatttggatccagaatactacatgcgacaaaggttgactctaaagtctgatgtgtactctttcggtgttgtgcttcttgag |
4785039 |
T |
|
| Q |
338 |
gtgttgtgtgctagacc |
354 |
Q |
| |
|
||||||||||| ||||| |
|
|
| T |
4785040 |
gtgttgtgtgcgagacc |
4785056 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 38 - 354
Target Start/End: Original strand, 4817169 - 4817485
Alignment:
| Q |
38 |
tggaagaagaggcttgagattctattgggttccgcgagagggctgaattatcttcatgctgaggtgaaacacaagataatacaccgtgacgtgaagagca |
137 |
Q |
| |
|
|||||| ||||||||||||||||||| ||| ||||| | ||| || ||||| | ||||| | | ||| ||||| || ||||||||||| |||||||| | |
|
|
| T |
4817169 |
tggaagcagaggcttgagattctattaggtgccgcgcgggggttgcattatttgcatgcaggtgcgaagcacaatatcatacaccgtgatgtgaagagta |
4817268 |
T |
|
| Q |
138 |
ccaacatattgttggatgagaaatgggtggctaaggtttctgattttggattatcgaaagtgggaccgacagggatgtctacaacccatgttagcacgat |
237 |
Q |
| |
|
| ||||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||| | |||||||| ||||| || |
|
|
| T |
4817269 |
caaacatattgttggatgaaaaatgggtggctaaggtttctgattttgggttatcaaaagtgggacctacagggatgtcgatgacccatgtcagcactat |
4817368 |
T |
|
| Q |
238 |
ggtgaagggtagcctagggtatttggatccagaatattatatgctccaaaggctaactctaaaatctgatgtgtactcattcggtgtggtgcttcttgag |
337 |
Q |
| |
|
|||||| ||||| || |||||||||||||||||||| || |||| ||||| | |||||||| |||||||||||||| |||||||| |||||||||||| |
|
|
| T |
4817369 |
ggtgaaaggtagtctcgggtatttggatccagaatactacatgcgacaaagattgactctaaagtctgatgtgtactctttcggtgttgtgcttcttgag |
4817468 |
T |
|
| Q |
338 |
gtgttgtgtgctagacc |
354 |
Q |
| |
|
||||||||||| ||||| |
|
|
| T |
4817469 |
gtgttgtgtgcgagacc |
4817485 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 38 - 357
Target Start/End: Complemental strand, 4863100 - 4862781
Alignment:
| Q |
38 |
tggaagaagaggcttgagattctattgggttccgcgagagggctgaattatcttcatgctgaggtgaaacacaagataatacaccgtgacgtgaagagca |
137 |
Q |
| |
|
||||||||||| ||||||||||| ||||| | || || ||| | ||||||||||||||| || || ||||| || |||||||||||||||||||| | |
|
|
| T |
4863100 |
tggaagaagagacttgagattctgttgggggcagcaagggggttacattatcttcatgctggtgtaaagcacaatatcatacaccgtgacgtgaagagta |
4863001 |
T |
|
| Q |
138 |
ccaacatattgttggatgagaaatgggtggctaaggtttctgattttggattatcgaaagtgggaccgacagggatgtctacaacccatgttagcacgat |
237 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||| |||||||| || ||||| ||||||||||| ||||| ||||||| || || || ||||| | |
|
|
| T |
4863000 |
ccaacatattgttggatgaaaaatgggtggctaaggtgtctgatttcgggttatcaaaagtgggaccaacaggaatgtctatcactcacgtcagcaccgt |
4862901 |
T |
|
| Q |
238 |
ggtgaagggtagcctagggtatttggatccagaatattatatgctccaaaggctaactctaaaatctgatgtgtactcattcggtgtggtgcttcttgag |
337 |
Q |
| |
|
|||||||||||| || || ||||| ||||||||||| || | | |||||| | ||||||||||| || ||||| || |||||||| || ||||||||| |
|
|
| T |
4862900 |
ggtgaagggtagtcttggatatttagatccagaatactaccttcgtcaaaggttgactctaaaatccgacgtgtattctttcggtgttgtccttcttgag |
4862801 |
T |
|
| Q |
338 |
gtgttgtgtgctagaccacc |
357 |
Q |
| |
|
||||||||||| |||||||| |
|
|
| T |
4862800 |
gtgttgtgtgcgagaccacc |
4862781 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 38 - 361
Target Start/End: Original strand, 4698095 - 4698418
Alignment:
| Q |
38 |
tggaagaagaggcttgagattctattgggttccgcgagagggctgaattatcttcatgctgaggtgaaacacaagataatacaccgtgacgtgaagagca |
137 |
Q |
| |
|
||||||||||| || |||||||||||||| | || ||||| || ||||||||||||| | | ||| ||||| || ||||||||||| |||||||| | |
|
|
| T |
4698095 |
tggaagaagagactcgagattctattgggggcagcaagaggcctacattatcttcatgcaggtgcgaagcacaatatcatacaccgtgatgtgaagagta |
4698194 |
T |
|
| Q |
138 |
ccaacatattgttggatgagaaatgggtggctaaggtttctgattttggattatcgaaagtgggaccgacagggatgtctacaacccatgttagcacgat |
237 |
Q |
| |
|
||||||||||||| ||||| |||||||||||||||||||||||||| || ||||| ||||||||||| ||||| ||||| | ||||| || ||||| | |
|
|
| T |
4698195 |
ccaacatattgttagatgataaatgggtggctaaggtttctgatttcgggttatcaaaagtgggaccaacaggaatgtcgatgacccacgtcagcactaa |
4698294 |
T |
|
| Q |
238 |
ggtgaagggtagcctagggtatttggatccagaatattatatgctccaaaggctaactctaaaatctgatgtgtactcattcggtgtggtgcttcttgag |
337 |
Q |
| |
|
|||||||||||| || |||||||| ||||| ||||| || | | |||||| | || ||||| || || |||||||| || ||||| |||||||||||| |
|
|
| T |
4698295 |
ggtgaagggtagtctcgggtatttagatcccgaatactaccttcgtcaaaggttgaccctaaagtccgacgtgtactcttttggtgttgtgcttcttgag |
4698394 |
T |
|
| Q |
338 |
gtgttgtgtgctagaccacctttg |
361 |
Q |
| |
|
|| |||||||| |||||||||||| |
|
|
| T |
4698395 |
gtattgtgtgcgagaccacctttg |
4698418 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 116 - 361
Target Start/End: Original strand, 4713049 - 4713294
Alignment:
| Q |
116 |
atacaccgtgacgtgaagagcaccaacatattgttggatgagaaatgggtggctaaggtttctgattttggattatcgaaagtgggaccgacagggatgt |
215 |
Q |
| |
|
|||||||||||||| ||||| || || |||||||||||||| |||||||||||||||||||||||||| || ||||| ||||||||||| |||||||| | |
|
|
| T |
4713049 |
atacaccgtgacgttaagagtacaaatatattgttggatgaaaaatgggtggctaaggtttctgatttcggtttatcaaaagtgggaccaacagggatat |
4713148 |
T |
|
| Q |
216 |
ctacaacccatgttagcacgatggtgaagggtagcctagggtatttggatccagaatattatatgctccaaaggctaactctaaaatctgatgtgtactc |
315 |
Q |
| |
|
| | || ||||| ||||| |||||||||||||| |||| |||||||||||||| | || | | | | | | ||||| || ||||| |||||||| |
|
|
| T |
4713149 |
caatgactcatgtcagcactatggtgaagggtagtataggatatttggatccagagtgctacctacgaaacaagttgactcttaagtctgacgtgtactc |
4713248 |
T |
|
| Q |
316 |
attcggtgtggtgcttcttgaggtgttgtgtgctagaccacctttg |
361 |
Q |
| |
|
|||||| || ||||||||||||||||||||||| |||||||||||| |
|
|
| T |
4713249 |
attcggagttgtgcttcttgaggtgttgtgtgcgagaccacctttg |
4713294 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 53 - 272
Target Start/End: Original strand, 4846941 - 4847160
Alignment:
| Q |
53 |
gagattctattgggttccgcgagagggctgaattatcttcatgctgaggtgaaacacaagataatacaccgtgacgtgaagagcaccaacatattgttgg |
152 |
Q |
| |
|
||||||||||| ||| | || || ||| ||||||||||||||| | | ||| ||||| || ||||| |||||||| ||||| || ||||||||||||| |
|
|
| T |
4846941 |
gagattctattaggtgcagcaagggggttgaattatcttcatgaaggtgcgaagcacaatatcatacatcgtgacgttaagagtacaaacatattgttgg |
4847040 |
T |
|
| Q |
153 |
atgagaaatgggtggctaaggtttctgattttggattatcgaaagtgggaccgacagggatgtctacaacccatgttagcacgatggtgaagggtagcct |
252 |
Q |
| |
|
|||| |||||||||||||||||||||||||| || ||||| ||||||||||| || ||||| || | || ||||| ||||| |||||||||||||| | |
|
|
| T |
4847041 |
atgaaaaatgggtggctaaggtttctgatttcgggttatcaaaagtgggaccaaccgggatatcaatgactcatgtaagcactatggtgaagggtagtat |
4847140 |
T |
|
| Q |
253 |
agggtatttggatccagaat |
272 |
Q |
| |
|
||| |||||||||||||||| |
|
|
| T |
4847141 |
aggatatttggatccagaat |
4847160 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 254 - 309
Target Start/End: Complemental strand, 4677000 - 4676945
Alignment:
| Q |
254 |
gggtatttggatccagaatattatatgctccaaaggctaactctaaaatctgatgt |
309 |
Q |
| |
|
|||||||||||||| |||||||| |||||||||||||||||||||||||| ||||| |
|
|
| T |
4677000 |
gggtatttggatcctgaatattacatgctccaaaggctaactctaaaatcggatgt |
4676945 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 293 - 361
Target Start/End: Original strand, 4854596 - 4854664
Alignment:
| Q |
293 |
actctaaaatctgatgtgtactcattcggtgtggtgcttcttgaggtgttgtgtgctagaccacctttg |
361 |
Q |
| |
|
|||||||| |||||||||||||| ||||||| || ||||||||| |||||||||| |||||||||||| |
|
|
| T |
4854596 |
actctaaagtctgatgtgtactctttcggtgatgtacttcttgagatgttgtgtgcgagaccacctttg |
4854664 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 119 - 189
Target Start/End: Original strand, 27539508 - 27539578
Alignment:
| Q |
119 |
caccgtgacgtgaagagcaccaacatattgttggatgagaaatgggtggctaaggtttctgattttggatt |
189 |
Q |
| |
|
|||||||| ||||||| || ||||| || | |||||||| |||||||| |||||||||||||||||||| |
|
|
| T |
27539508 |
caccgtgatgtgaagactacaaacattttactagatgagaagtgggtggccaaggtttctgattttggatt |
27539578 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 186; Significance: 1e-100; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 20 - 361
Target Start/End: Original strand, 18926626 - 18926967
Alignment:
| Q |
20 |
aataaccagcccttaccgtggaagaagaggcttgagattctattgggttccgcgagagggctgaattatcttcatgctgaggtgaaacacaagataatac |
119 |
Q |
| |
|
|||||||| ||| ||| |||||| | |||||||||||| |||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18926626 |
aataaccaacccctactttggaagcaaaggcttgagattgtattgggtgccgcaagagggctgaattatcttcatgctgaggtgaaacacaagataatac |
18926725 |
T |
|
| Q |
120 |
accgtgacgtgaagagcaccaacatattgttggatgagaaatgggtggctaaggtttctgattttggattatcgaaagtgggaccgacagggatgtctac |
219 |
Q |
| |
|
| ||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||| || || || ||||| || |||||||| || ||||| || || |
|
|
| T |
18926726 |
atcgtgatgtgaaaagcaccaacatattattggatgagaaatgggtggctaaggtttccgacttcgggttatccaaggtgggaccaacggggatatcaac |
18926825 |
T |
|
| Q |
220 |
aacccatgttagcacgatggtgaagggtagcctagggtatttggatccagaatattatatgctccaaaggctaactctaaaatctgatgtgtactcattc |
319 |
Q |
| |
|
|||||||| ||||| ||||||||||| || || |||||||| ||||| || || ||||||||||||||||| || ||||||||||| |||||||||||| |
|
|
| T |
18926826 |
tacccatgtcagcacaatggtgaaggggagtcttgggtatttagatcctgagtactatatgctccaaaggcttaccctaaaatctgacgtgtactcattc |
18926925 |
T |
|
| Q |
320 |
ggtgtggtgcttcttgaggtgttgtgtgctagaccacctttg |
361 |
Q |
| |
|
|||||||||||||||||||| |||||||| || ||||||||| |
|
|
| T |
18926926 |
ggtgtggtgcttcttgaggtattgtgtgcaaggccacctttg |
18926967 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 119 - 189
Target Start/End: Original strand, 46271746 - 46271816
Alignment:
| Q |
119 |
caccgtgacgtgaagagcaccaacatattgttggatgagaaatgggtggctaaggtttctgattttggatt |
189 |
Q |
| |
|
|||||||| ||||||| || ||||| || | |||||||| |||||||| |||||||||||||||||||| |
|
|
| T |
46271746 |
caccgtgatgtgaagactacaaacattttactagatgagaagtgggtggccaaggtttctgattttggatt |
46271816 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 197
Target Start/End: Original strand, 45191495 - 45191576
Alignment:
| Q |
116 |
atacaccgtgacgtgaagagcaccaacatattgttggatgagaaatgggtggctaaggtttctgattttggattatcgaaag |
197 |
Q |
| |
|
||||||||||||||||||| || || ||| | ||||||||||| | || || ||||||||||||||||| ||||| |||| |
|
|
| T |
45191495 |
atacaccgtgacgtgaagacaacaaatatactcttggatgagaattatgttgccaaggtttctgattttggtttatctaaag |
45191576 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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