View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11732_low_27 (Length: 299)
Name: NF11732_low_27
Description: NF11732
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11732_low_27 |
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Alignment Details
Target: chr3 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 17 - 287
Target Start/End: Original strand, 36935244 - 36935514
Alignment:
| Q |
17 |
aaaaatccatacccatgatactagccctaaccaaccccaactttgacaagaaagaccatttttaacttggttgagannnnnnncgatttcaaaagatgag |
116 |
Q |
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| T |
36935244 |
aaaaatccatacccatgataccagccctaaccaaccccaactttgacaagaaagaccatttttaacttggttgaggtttttttcgatttcaaaagatgag |
36935343 |
T |
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| Q |
117 |
acgagtatgcaatggagacattagtatgcaccctagatccgtacccatcccgtttgtttaaaaataaataattacgtctcttttatttagaaatcatccg |
216 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
36935344 |
acgagtatgcaatggagacattagtatgcaccctagatccgtacccatcccgtttgtttaaaaataaataattacatctcttttatttagaaatcatccg |
36935443 |
T |
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| Q |
217 |
aacccaatattttttgtactgattcactatttcgcctttgtctcgttcttccgccgcactctatcacttct |
287 |
Q |
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||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36935444 |
aacccaatattttttgtactgattcaccatttcgcctttgtctcgttcttccgccgcactctatcacttct |
36935514 |
T |
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