View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11732_low_3 (Length: 816)

Name: NF11732_low_3
Description: NF11732
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11732_low_3
NF11732_low_3
[»] chr8 (27 HSPs)
chr8 (101-807)||(31280598-31281318)
chr8 (472-807)||(30972439-30972781)
chr8 (449-771)||(22661175-22661504)
chr8 (279-550)||(29807067-29807341)
chr8 (16-116)||(31280478-31280580)
chr8 (431-617)||(4867565-4867752)
chr8 (449-612)||(43377060-43377223)
chr8 (431-745)||(39580-39901)
chr8 (449-614)||(34367054-34367219)
chr8 (427-771)||(35962426-35962779)
chr8 (436-656)||(43679525-43679746)
chr8 (449-705)||(39751203-39751459)
chr8 (449-751)||(23924108-23924415)
chr8 (449-576)||(23578577-23578704)
chr8 (431-617)||(31959823-31960011)
chr8 (465-612)||(2124339-2124486)
chr8 (449-656)||(20548982-20549189)
chr8 (449-608)||(41238991-41239150)
chr8 (431-751)||(30301256-30301585)
chr8 (515-751)||(22588065-22588306)
chr8 (709-771)||(39751662-39751726)
chr8 (630-779)||(43376872-43377028)
chr8 (709-780)||(41744231-41744304)
chr8 (449-750)||(7344180-7344488)
chr8 (449-525)||(7172465-7172541)
chr8 (450-487)||(1116107-1116144)
chr8 (709-771)||(7171918-7171982)
[»] chr2 (41 HSPs)
chr2 (364-807)||(25613259-25613710)
chr2 (490-713)||(42809249-42809471)
chr2 (449-809)||(45479384-45479751)
chr2 (449-771)||(28342665-28342995)
chr2 (449-779)||(41181553-41181890)
chr2 (449-612)||(41052764-41052927)
chr2 (479-713)||(27732975-27733208)
chr2 (449-658)||(41004669-41004878)
chr2 (449-612)||(9659823-9659986)
chr2 (449-612)||(24601782-24601945)
chr2 (449-612)||(24612169-24612332)
chr2 (449-611)||(439592-439752)
chr2 (449-612)||(43943832-43943997)
chr2 (459-658)||(12905672-12905871)
chr2 (431-612)||(1096692-1096875)
chr2 (449-604)||(25184606-25184761)
chr2 (488-599)||(43668303-43668414)
chr2 (431-751)||(7267067-7267394)
chr2 (449-609)||(10825361-10825521)
chr2 (431-743)||(24753655-24753974)
chr2 (449-609)||(39950941-39951101)
chr2 (449-612)||(82031-82193)
chr2 (626-763)||(43668416-43668560)
chr2 (448-617)||(38950328-38950497)
chr2 (449-609)||(32952873-32953033)
chr2 (431-611)||(3795459-3795641)
chr2 (431-751)||(39798063-39798389)
chr2 (515-612)||(3206956-3207053)
chr2 (630-771)||(24601977-24602123)
chr2 (630-771)||(24611991-24612137)
chr2 (449-609)||(29398052-29398208)
chr2 (431-751)||(41564113-41564442)
chr2 (630-771)||(9659641-9659791)
chr2 (709-771)||(12905937-12906001)
chr2 (709-771)||(41053041-41053105)
chr2 (630-794)||(1096907-1097078)
chr2 (709-751)||(3795758-3795800)
chr2 (709-751)||(81873-81915)
chr2 (709-751)||(38949809-38949851)
chr2 (673-779)||(43944068-43944181)
chr2 (448-505)||(7189827-7189884)
[»] chr6 (24 HSPs)
chr6 (349-807)||(20448353-20448818)
chr6 (394-666)||(19129066-19129334)
chr6 (449-624)||(20439760-20439935)
chr6 (432-744)||(34230605-34230923)
chr6 (449-624)||(20436052-20436227)
chr6 (449-771)||(29286345-29286674)
chr6 (450-771)||(23959034-23959362)
chr6 (449-617)||(7537329-7537497)
chr6 (427-771)||(25140706-25141059)
chr6 (431-771)||(31150666-31151014)
chr6 (449-612)||(18610000-18610163)
chr6 (449-658)||(29667554-29667763)
chr6 (449-612)||(2051170-2051333)
chr6 (449-576)||(8304580-8304707)
chr6 (449-609)||(3502434-3502594)
chr6 (448-612)||(26702479-26702642)
chr6 (449-607)||(11840022-11840180)
chr6 (450-550)||(2258429-2258529)
chr6 (449-612)||(28362498-28362661)
chr6 (673-780)||(7537567-7537681)
chr6 (449-611)||(13382770-13382932)
chr6 (431-609)||(31771510-31771690)
chr6 (630-771)||(2051365-2051513)
chr6 (709-751)||(13383049-13383091)
[»] chr4 (23 HSPs)
chr4 (428-713)||(31598613-31598897)
chr4 (449-751)||(10423031-10423337)
chr4 (449-771)||(6186789-6187130)
chr4 (431-658)||(18578746-18578974)
chr4 (449-612)||(44050860-44051023)
chr4 (449-613)||(38460568-38460732)
chr4 (427-612)||(37394984-37395171)
chr4 (449-625)||(30043186-30043362)
chr4 (431-612)||(50904930-50905112)
chr4 (431-751)||(3407862-3408190)
chr4 (449-609)||(37016041-37016201)
chr4 (465-612)||(51642165-51642312)
chr4 (431-607)||(4774386-4774563)
chr4 (450-609)||(51492215-51492374)
chr4 (431-614)||(44674262-44674445)
chr4 (511-771)||(10374244-10374511)
chr4 (449-609)||(50278593-50278753)
chr4 (431-611)||(15995844-15996026)
chr4 (630-771)||(37394804-37394952)
chr4 (709-771)||(44050680-44050744)
chr4 (431-751)||(49563963-49564292)
chr4 (636-751)||(30043046-30043166)
chr4 (709-751)||(38460833-38460875)
[»] chr5 (31 HSPs)
chr5 (449-698)||(6267617-6267866)
chr5 (449-648)||(43179631-43179830)
chr5 (449-771)||(7796720-7797049)
chr5 (482-603)||(16440192-16440313)
chr5 (431-751)||(25890117-25890444)
chr5 (427-612)||(24053273-24053459)
chr5 (449-771)||(33994750-33995079)
chr5 (431-745)||(34079760-34080081)
chr5 (427-612)||(34122643-34122830)
chr5 (427-751)||(27863522-27863853)
chr5 (449-612)||(25877763-25877924)
chr5 (449-751)||(13563784-13564091)
chr5 (457-612)||(24050177-24050332)
chr5 (431-751)||(28882117-28882438)
chr5 (449-617)||(1039567-1039735)
chr5 (427-734)||(7017630-7017944)
chr5 (449-751)||(37814725-37815032)
chr5 (427-609)||(41799539-41799721)
chr5 (522-612)||(30292292-30292382)
chr5 (427-609)||(7762013-7762197)
chr5 (414-494)||(15394158-15394239)
chr5 (448-527)||(4196696-4196775)
chr5 (431-609)||(38407271-38407449)
chr5 (709-794)||(34122946-34123033)
chr5 (449-751)||(38855857-38856165)
chr5 (431-590)||(28388308-28388469)
chr5 (709-794)||(43179443-43179530)
chr5 (659-713)||(16440143-16440197)
chr5 (709-751)||(24050446-24050488)
chr5 (709-751)||(24053571-24053613)
chr5 (449-751)||(11029151-11029457)
[»] chr1 (47 HSPs)
chr1 (488-713)||(10165506-10165730)
chr1 (426-679)||(25233945-25234199)
chr1 (449-771)||(8459100-8459429)
chr1 (427-609)||(4518186-4518369)
chr1 (456-771)||(37018997-37019319)
chr1 (449-771)||(5141471-5141799)
chr1 (449-768)||(7966125-7966458)
chr1 (430-612)||(51666433-51666616)
chr1 (449-617)||(46979020-46979188)
chr1 (449-611)||(19495182-19495344)
chr1 (431-612)||(13177903-13178083)
chr1 (449-751)||(44469634-44469941)
chr1 (449-609)||(94540-94700)
chr1 (428-611)||(1655858-1656042)
chr1 (449-617)||(46886150-46886318)
chr1 (449-751)||(9710720-9711027)
chr1 (431-601)||(47714865-47715036)
chr1 (449-609)||(22527465-22527625)
chr1 (449-617)||(50113450-50113618)
chr1 (449-771)||(25039682-25040011)
chr1 (449-610)||(19521739-19521900)
chr1 (448-609)||(31780109-31780270)
chr1 (570-648)||(1179877-1179955)
chr1 (448-751)||(29352375-29352683)
chr1 (466-617)||(36072522-36072673)
chr1 (450-609)||(52805330-52805489)
chr1 (514-656)||(38690117-38690259)
chr1 (431-617)||(15051110-15051298)
chr1 (431-617)||(20353697-20353885)
chr1 (449-610)||(22345818-22345974)
chr1 (449-609)||(470840-471000)
chr1 (431-751)||(30909652-30909979)
chr1 (456-609)||(16281846-16281999)
chr1 (449-605)||(21144405-21144561)
chr1 (514-660)||(33168111-33168257)
chr1 (709-771)||(1655681-1655745)
chr1 (709-771)||(19495460-19495524)
chr1 (537-751)||(5081987-5082206)
chr1 (431-751)||(38771752-38772081)
chr1 (709-751)||(6558309-6558351)
chr1 (630-751)||(12643529-12643655)
chr1 (466-611)||(6558047-6558192)
chr1 (449-751)||(13633495-13633803)
chr1 (431-500)||(23359228-23359299)
chr1 (709-751)||(13177749-13177791)
chr1 (642-751)||(36072708-36072822)
chr1 (630-771)||(50113645-50113793)
[»] chr3 (31 HSPs)
chr3 (515-713)||(7314585-7314782)
chr3 (414-766)||(14013652-14014001)
chr3 (449-607)||(6489471-6489629)
chr3 (515-750)||(35443315-35443553)
chr3 (457-612)||(21951950-21952105)
chr3 (431-609)||(600314-600493)
chr3 (449-617)||(4002267-4002435)
chr3 (449-609)||(42166182-42166342)
chr3 (431-751)||(9426728-9427055)
chr3 (449-744)||(48246554-48246854)
chr3 (449-609)||(50213600-50213760)
chr3 (449-612)||(7841238-7841401)
chr3 (431-609)||(47070592-47070771)
chr3 (449-604)||(52387942-52388097)
chr3 (449-609)||(36134053-36134213)
chr3 (449-612)||(67016-67179)
chr3 (449-609)||(2271497-2271658)
chr3 (431-750)||(6744950-6745276)
chr3 (449-607)||(9473721-9473879)
chr3 (449-563)||(14402813-14402927)
chr3 (448-609)||(16646944-16647104)
chr3 (431-617)||(36812960-36813148)
chr3 (431-751)||(13743390-13743716)
chr3 (431-608)||(2857753-2857932)
chr3 (431-612)||(46989635-46989818)
chr3 (530-612)||(9440410-9440492)
chr3 (449-750)||(3952838-3953146)
chr3 (630-771)||(6489667-6489815)
chr3 (709-751)||(2743863-2743905)
chr3 (556-606)||(39964665-39964715)
chr3 (709-771)||(46989934-46989998)
[»] chr7 (21 HSPs)
chr7 (449-771)||(34622641-34622970)
chr7 (476-713)||(5731819-5732055)
chr7 (431-617)||(19044416-19044603)
chr7 (431-617)||(20710033-20710220)
chr7 (431-771)||(47742590-47742939)
chr7 (449-751)||(18109416-18109724)
chr7 (448-658)||(10705389-10705599)
chr7 (431-751)||(15069973-15070301)
chr7 (431-617)||(40928715-40928903)
chr7 (451-609)||(17838405-17838563)
chr7 (449-607)||(34742168-34742325)
chr7 (449-751)||(42503461-42503769)
chr7 (485-612)||(12111394-12111521)
chr7 (431-751)||(603902-604229)
chr7 (449-604)||(29592686-29592841)
chr7 (539-613)||(47065074-47065148)
chr7 (630-794)||(19044630-19044801)
chr7 (630-794)||(20709835-20710006)
chr7 (458-609)||(5537996-5538147)
chr7 (431-751)||(30790629-30790958)
chr7 (712-794)||(29592913-29592997)
[»] scaffold0219 (1 HSPs)
scaffold0219 (449-612)||(19878-20041)
[»] scaffold0116 (1 HSPs)
scaffold0116 (449-744)||(15585-15885)
[»] scaffold0513 (1 HSPs)
scaffold0513 (431-705)||(8322-8598)
[»] scaffold0494 (1 HSPs)
scaffold0494 (431-751)||(4949-5277)
[»] scaffold0199 (1 HSPs)
scaffold0199 (449-609)||(12546-12706)
[»] scaffold0201 (1 HSPs)
scaffold0201 (431-617)||(22524-22711)
[»] scaffold0169 (2 HSPs)
scaffold0169 (449-546)||(1517-1614)
scaffold0169 (709-771)||(10865-10929)
[»] scaffold0011 (1 HSPs)
scaffold0011 (449-609)||(236006-236166)
[»] scaffold0057 (2 HSPs)
scaffold0057 (537-658)||(21868-21989)
scaffold0057 (449-500)||(21792-21843)


Alignment Details
Target: chr8 (Bit Score: 519; Significance: 0; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 519; E-Value: 0
Query Start/End: Original strand, 101 - 807
Target Start/End: Original strand, 31280598 - 31281318
Alignment:
Q  101 caagatcttttgatatgataaaatgaaacattacacaaggcagtcaacatagttctcaggggtatttgtgcatttgccaagggtttggcccgtgtgaaat 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  31280598 caagatcttttgatatgataaaatgaaacattacacaaggcagtcaacatagttctcaggggtatttgtgcatttgccaagggtttggcccatgtgaaat 31280697  T
Q  201 atctggtttttgttttt------gtagtgactcattcaaccttgacacccaagaaatgggaaattgttgttcacacgtagtattaggctaaaaaacatca 294  Q
    ||||| ||||| |||||      |||||||||| ||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  31280698 atctgttttttttttttttttttgtagtgactcgttcaaccttgacacctaagaaatgggaaattgttgttcacacatagtattaggctaaaaaacatca 31280797  T
Q  295 ttaaaagaccaaaatacatctcgacagttaattgctgtcggtttcgtattcctcacagttaagtgccgccggatccatcggcagttaactaccaatg-at 393  Q
    ||||||||||||||||||||||| || |||||||| |   ||||||||||||||  |||||||||||| ||||| ||||| |||||||||||| ||| ||    
T  31280798 ttaaaagaccaaaatacatctcgtcaattaattgccgctagtttcgtattcctcgtagttaagtgccgtcggattcatcgacagttaactaccgatgcat 31280897  T
Q  394 tcaattatacagacagtgacttctgcataatggttttcaagccattttttgcctatttttacctgtaattcaaccagagcatttccagaggcaatacaac 493  Q
    |||||||| ||||||||  |||||||||||||||||||||| ||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  31280898 tcaattatgcagacagtagcttctgcataatggttttcaagtcattttcggcctatttttacctgtaattcaaccagagcatttccagagacaatacaac 31280997  T
Q  494 tcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaattgactgtaattaaatcaatccaacatttcattaaaa--ttacacg 591  Q
    ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||  |||||||    
T  31280998 tcatacaccatttataatcggtcataaacaagaacaatacataatcttttacaattgactgtaattaaatcaatctgacatttcgttaaaattttacacg 31281097  T
Q  592 aatgtttgaaattcatcaaaatattaaagagtgcttgaaattaaacaacacattacatatcattacataaaatatctatcgacattctacgcacatgcag 691  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| ||||||||||||| |||||    
T  31281098 aatgtttgaaattcatcaaaatattaaagagtgcttgaaattaaacaacacattacatatcattacataagatatttatcaacattctacgcacgtgcag 31281197  T
Q  692 atggaacgaacataaag-----atatattatcttcaaccatattctgaaacataaatcctacgtctatcgtcacgaataagccaatgcttataaatcacc 786  Q
    |||||||||||||||||     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  31281198 atggaacgaacataaagatataatatattatcttcaaccatattctgaaacataaatcctacgtctatcgtcacgaataagccaatgcttataaatcgcc 31281297  T
Q  787 gttttccacatgtcttcatct 807  Q
    |||||||||||||||||||||    
T  31281298 gttttccacatgtcttcatct 31281318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 141; E-Value: 2e-73
Query Start/End: Original strand, 472 - 807
Target Start/End: Complemental strand, 30972781 - 30972439
Alignment:
Q  472 gcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaattgactgtaattaaatcaatccaa 571  Q
    |||||| ||||||||||||||||||||||||||||| | || |||||||||||||| ||||||| |||||||||  ||| |  ||||||||||||| |||    
T  30972781 gcattttcagaggcaatacaactcatacatcatttatactcagtcataaacaagaaaaatacattatcttttacggttgtcgataattaaatcaattcaa 30972682  T
Q  572 catttcattaaaattacacgaatgtttgaaattcatcaaaatattaaagagtgcttgaaattaaacaacacattacatatcattacataaaatatctatc 671  Q
    |||||| |||||||||||||||||||||||||||||||||| |||| |||||      ||||||||||||||||||| ||||||||||||||||||||||    
T  30972681 catttcgttaaaattacacgaatgtttgaaattcatcaaaacattacagagtatacataattaaacaacacattacacatcattacataaaatatctatc 30972582  T
Q  672 gacattctacgcacatgcagatggaacgaacata-----aagatatattatcttcaaccatat-tctgaaacataaatcctacgt--ctatcgtcacgaa 763  Q
    |||||||||||||  |||| ||||||| |||| |     |  ||||||||||||||||||||| ||| |||||||| |   ||||  ||||| ||||| |    
T  30972581 gacattctacgcatgtgcaaatggaacaaacacacatatataatatattatcttcaaccatatgtct-aaacataagtgaaacgtcactatcatcacgga 30972483  T
Q  764 taagccaatgcttataaatcaccgttttccacatgtcttcatct 807  Q
    |||||||  ||| ||||||| |||||||||||||||||||||||    
T  30972482 taagccatggctcataaatcgccgttttccacatgtcttcatct 30972439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 449 - 771
Target Start/End: Complemental strand, 22661504 - 22661175
Alignment:
Q  449 tttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaat 548  Q
    ||||||||||||||||||| |||||||||||| ||||| ||  | |  |||| |||||| | || |||||||||||||| ||||||| |||||||||  |    
T  22661504 tttttacctgtaattcaactagagcatttccaaaggcattattagttgtacaacatttatactcagtcataaacaagaaaaatacattatcttttacggt 22661405  T
Q  549 tgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaatattaaagagtgcttgaaattaaacaacacattaca 648  Q
    || |  |||||||||||| || | ||||| |||||||||||||||||||||| ||||||||||| |||||||||||     |||||||||||||||||||    
T  22661404 tgtccataattaaatcaaaccgatatttcgttaaaattacacgaatgtttgagattcatcaaaacattaaagagtgtccataattaaacaacacattaca 22661305  T
Q  649 tatcattacataaaatatctatcgacattctacgcacatgcagatggaacgaacata-----aagatatattatcttcaaccatattctgaaacataaat 743  Q
    |||| ||| || |||| ||||  |||||||| ||||  |||| ||||||||||||||     |  |||||| |||||| ||||||||| |||||||| |     
T  22661304 tatcgttaaattaaatctctactgacattctgcgcagttgcatatggaacgaacatacatatataatatatcatcttccaccatattccgaaacatagac 22661205  T
Q  744 cctacgt--ctatcgtcacgaataagccaa 771  Q
    || ||||  ||||||||  |||||||||||    
T  22661204 ccgacgtcgctatcgtcgtgaataagccaa 22661175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 279 - 550
Target Start/End: Complemental strand, 29807341 - 29807067
Alignment:
Q  279 aggctaaaaaacatcattaaaagaccaaaatacatctcgacagttaattgctgtcggtttcgtatt-cctca-cagttaagtgccgccggatccatcggc 376  Q
    ||||| ||| |||||| |||| ||||||||||| ||| |||| |||| ||| | || ||| ||||| ||||| ||||||||||  | | |||| || |||    
T  29807341 aggctgaaacacatcaataaatgaccaaaatacctcttgacaattaactgccgccgattttgtatttcctcagcagttaagtgttgtcagatctattggc 29807242  T
Q  377 agttaactaccaatgat-tcaattatacagacagtgacttctgcataatggttttcaagccattttttgcctatttttacctgtaattcaaccagagcat 475  Q
    |||||||| || | ||  |||||||||||||||||| ||||| ||||||||   |||| |||||||  | || ||||||||||||||||||||| |||||    
T  29807241 agttaactgccgaggaaatcaattatacagacagtggcttctacataatggaaatcaaaccattttcggtctctttttacctgtaattcaaccatagcat 29807142  T
Q  476 ttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaattg 550  Q
    |||||||||||||||||||||||||  ||||| |||  |||||||||||||||| ||||| ||||||||||||||    
T  29807141 ttccagaggcaatacaactcatacactatttataataagtcataaacaagaacattacatgatcttttacaattg 29807067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 16 - 116
Target Start/End: Original strand, 31280478 - 31280580
Alignment:
Q  16 accttcctcaaacaacaaacgaaaacaaaaccaatccaatctataga-ttac-aattcactgcagtcttatccatttgccttccgtacaagatcttttga 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||||    
T  31280478 accttcctcaaacaacaaacgaaaacaaaaccaatccaatctatagatttacaaattcactgcactcttatccatttgccttccgtacaagatcttttga 31280577  T
Q  114 tat 116  Q
    |||    
T  31280578 tat 31280580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 431 - 617
Target Start/End: Complemental strand, 4867752 - 4867565
Alignment:
Q  431 caagccattttttgccta-tttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaaca 529  Q
    |||||||||||||| | | ||||||| ||||||| ||| |||||||||||| |||||||| |||||||||| |||||| | || |||||||||||||| |    
T  4867752 caagccattttttggccagtttttacttgtaattaaactagagcatttccaaaggcaatataactcatacaacatttaaactcagtcataaacaagaaaa 4867653  T
Q  530 atacataatcttttacaattgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaatatta 617  Q
    |||||  |||||| || |||| |  |||||||||||| ||||||||| ||| ||| ||||| || |||||||||||||||||| ||||    
T  4867652 atacaatatctttcaccattgtccataattaaatcaaaccaacatttgatttaaaatacacaaaagtttgaaattcatcaaaacatta 4867565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 449 - 612
Target Start/End: Complemental strand, 43377223 - 43377060
Alignment:
Q  449 tttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaat 548  Q
    ||||||||||||||| |||||||||||||||| |||||||| || ||||||| |||| | | ||||||||||||||||| ||||||  ||||||||||||    
T  43377223 tttttacctgtaattaaaccagagcatttccaaaggcaatataaatcatacaacattgaaactcggtcataaacaagaaaaatacaatatcttttacaat 43377124  T
Q  549 tgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaa 612  Q
    || |  ||||||||| || || | ||||  || || |||||| || ||||||||||||||||||    
T  43377123 tgtccataattaaatgaaaccgaaatttggttcaagttacacaaacgtttgaaattcatcaaaa 43377060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 431 - 745
Target Start/End: Original strand, 39580 - 39901
Alignment:
Q  431 caagccatttttt--gcctatttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaac 528  Q
    |||||||||||||  ||| |||||||||||||||| |||||||||||||||| |||||| | || |||||||  ||| |   || | |||||||||||      
T  39580 caagccattttttcggccaatttttacctgtaattaaaccagagcatttccaaaggcaaaataattcatacaagattgaacctcagacataaacaagata 39679  T
Q  529 aatacataatcttttacaattgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaatattaaagagtgcttg 628  Q
    ||||||  |||||||||||||| |  ||||||||| || || ||||||  ||||||||| || ||  ||||||||||||||||| |||| | ||||        
T  39680 aatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattaaacaaacatttgaaattcatcaaaacattacaaagtgtcca 39779  T
Q  629 aaattaaacaacacattacatatcattacataaaatatctatcgacattctacgcacatgcagatggaacgaacata-----aagatatattatcttcaa 723  Q
     ||||||||||| ||||||| ||||||| || ||||  |||   |||||| |||||  |||| ||||||||||||||     |  ||||||||| ||| |    
T  39780 taattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattattttcca 39879  T
Q  724 ccatattctgaaacataaatcc 745  Q
    |||||||| |||||||||||||    
T  39880 ccatattccgaaacataaatcc 39901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 449 - 614
Target Start/End: Original strand, 34367054 - 34367219
Alignment:
Q  449 tttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaat 548  Q
    ||||||||||||||| |||||||||||||| | |||||| |||| ||||||| |||| | | |||| |||||||||||  ||||||  ||||||||||||    
T  34367054 tttttacctgtaattaaaccagagcatttcgaaaggcaaaacaattcatacagcattgaaactcggacataaacaagataaatacaatatcttttacaat 34367153  T
Q  549 tgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaata 614  Q
    || |  |||||||||||| || ||||||  || ||||||||| || ||||||||||||||| ||||    
T  34367154 tgtccataattaaatcaaaccgacattttgttcaaattacacaaacgtttgaaattcatcataata 34367219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 427 - 771
Target Start/End: Original strand, 35962426 - 35962779
Alignment:
Q  427 ttttcaagccatttttt--gcctatttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaa 524  Q
    |||||||||||||||||  ||| |||||||| |||||||  ||||||| ||| | | |||||| | || ||||||| |||| | | ||||  ||||||||    
T  35962426 ttttcaagccattttttcggccaatttttacgtgtaattataccagagtattacaaaaggcaaaataattcatacaacattaaaactcggatataaacaa 35962525  T
Q  525 gaacaatacataatcttttacaattgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaatattaaagagtg 624  Q
    ||  ||||||  |||||||||||||| |  ||||||||| || || | ||||  || ||||||||| || ||||||||||||||||||  ||| | ||||    
T  35962526 gataaatacaatatcttttacaattgtccataattaaattaaaccgaaatttggttcaaattacacaaacgtttgaaattcatcaaaacgttacaaagtg 35962625  T
Q  625 cttgaaattaaacaacacattacatatcattacataaaatatctatcgacattctacgcacatgcagatggaacgaacata-----aagatatattatct 719  Q
         ||||||||||| |||| || ||||||| || ||||  |||   |||||| |||||  |||| ||||||||||||||     |  |||||||||||    
T  35962626 tgcataattaaacaactcattgcacatcattaaattaaattcctacttacattcaacgcaattgcatatggaacgaacatacgtatataatatattatct 35962725  T
Q  720 tcaaccatattctgaaacataaatcctacgt--ctatcgtcacgaataagccaa 771  Q
    || ||||||||| ||||||||||||| ||||  |||||||| ||||||||||||    
T  35962726 tccaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaa 35962779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 436 - 656
Target Start/End: Original strand, 43679525 - 43679746
Alignment:
Q  436 cattttttgccta-tttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaataca 534  Q
    ||||||||| ||| ||||||| ||||||| ||||| |  ||||||| |||||||| || |||||||  ||| | | ||||||||||||||||| ||||||    
T  43679525 cattttttggctaatttttacatgtaattaaaccaaaatatttccaaaggcaatataaatcatacaaaattgaaactcggtcataaacaagaaaaataca 43679624  T
Q  535 taatcttttacaattgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaatattaaagagtgcttgaaatta 634  Q
      |||||||||||||| |  |||||||||||| || ||||||  || ||||||||| || |||| |||||||||||||  ||| | |||| |   |||||    
T  43679625 atatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttaaaattcatcaaaacgttacaaagtgttcataatta 43679724  T
Q  635 aacaacacattacatatcatta 656  Q
    |||||| ||||||| |||||||    
T  43679725 aacaactcattacacatcatta 43679746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 449 - 705
Target Start/End: Original strand, 39751203 - 39751459
Alignment:
Q  449 tttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaat 548  Q
    |||||| || ||||| |||||||||||||||| || ||||| || ||||||| |||| | | |||||||||| |||||| ||||||  |||||||||| |    
T  39751203 tttttaactataattaaaccagagcatttccaaagacaatataaatcatacaacattgaaactcggtcataaccaagaaaaatacaatatcttttacagt 39751302  T
Q  549 tgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaatattaaagagtgcttgaaattaaacaacacattaca 648  Q
    || | ||||||||||||| |  ||||||  || ||||||||| || ||||||||||||||||||  ||| | ||||     ||||||||||| |||||||    
T  39751303 tgtccgtaattaaatcaaactgacatttggttcaaattacacaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaaacaactcattaca 39751402  T
Q  649 tatcattacataaaatatctatcgacattctacgcacatgcagatggaacgaacata 705  Q
     ||||||| || ||||  |||   |||||| ||| |  |||| ||||||||||||||    
T  39751403 catcattaaattaaatccctacttacattcaacgtaattgcatatggaacgaacata 39751459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 449 - 751
Target Start/End: Original strand, 23924108 - 23924415
Alignment:
Q  449 tttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaat 548  Q
    ||||||||||||||| ||| |||||||||||| |||||| | || |||||||  ||| | | |||| |||||| ||||  | ||||  ||||||||||||    
T  23924108 tttttacctgtaattaaactagagcatttccaaaggcaaaataattcatacaagattgaaactcggacataaaaaagataagtacaatatcttttacaat 23924207  T
Q  549 tgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaatattaaagagtgcttgaaattaaacaacacattaca 648  Q
    ||    ||||||||| || || ||||||  ||||||||| || || |||||||||||||||||| |||| | ||||     ||||||||||| |||||||    
T  23924208 tgttcataattaaattaaaccgacatttggttaaaattaaacaaacgtttgaaattcatcaaaacattacaaagtgtccataattaaacaactcattaca 23924307  T
Q  649 tatcattacataaaatatctatcgacattctacgcacatgcagatggaacgaacata-----aagatatattatcttcaaccatattctgaaacataaat 743  Q
     ||||||| || ||||  |||   |||||| |||||  |||| ||||||||||||||     |  ||||||||| ||| ||||||||| |||||||||||    
T  23924308 catcattaaattaaatccctacttacattcaacgcaactgcatatggaacgaacatacatatataatatattattttccaccatattccgaaacataaat 23924407  T
Q  744 cctacgtc 751  Q
    || |||||    
T  23924408 ccgacgtc 23924415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 449 - 576
Target Start/End: Original strand, 23578577 - 23578704
Alignment:
Q  449 tttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaat 548  Q
    ||||||||||||||| |||||||||||||||| |||||||| || | ||||| |||| | | || |||||||||||||| ||||||  ||||||||||||    
T  23578577 tttttacctgtaattaaaccagagcatttccaaaggcaatataaattatacaacattgaaactctgtcataaacaagaaaaatacaatatcttttacaat 23578676  T
Q  549 tgactgtaattaaatcaatccaacattt 576  Q
    ||    |||||||||||| || ||||||    
T  23578677 tgttcataattaaatcaaaccgacattt 23578704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 431 - 617
Target Start/End: Complemental strand, 31960011 - 31959823
Alignment:
Q  431 caagccatttttt--gcctatttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaac 528  Q
    |||||||||||||  |||  ||||||||||||||| |||||||||||||||| |||||| | || ||||| |  ||| | | |||| |||||||||||      
T  31960011 caagccattttttcggccagtttttacctgtaattaaaccagagcatttccaaaggcaaaataattcatataagattgaaactcggacataaacaagata 31959912  T
Q  529 aatacataatcttttacaattgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaatatta 617  Q
    ||||||  ||||||||||||||    | ||||||| || || ||||||  ||||||||| || || |||||||||||||||||| ||||    
T  31959911 aatacaatatcttttacaattgttcatgattaaattaaacccacatttggttaaaattaaacaaacgtttgaaattcatcaaaacatta 31959823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 465 - 612
Target Start/End: Original strand, 2124339 - 2124486
Alignment:
Q  465 aaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaattgactgtaattaaatc 564  Q
    |||||||||||||||| |||||||| || ||||||| |||| | | |||||||||| |||||| |||| |  |||||||||| ||| |  || |||||||    
T  2124339 aaccagagcatttccaaaggcaatataaatcatacaacattgaaactcggtcataaccaagaaaaatataatatcttttacagttgtccatagttaaatc 2124438  T
Q  565 aatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaa 612  Q
    || || ||||||  || ||||||||| ||  |||||||||||||||||    
T  2124439 aaaccgacatttggttcaaattacacaaacatttgaaattcatcaaaa 2124486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 449 - 656
Target Start/End: Complemental strand, 20549189 - 20548982
Alignment:
Q  449 tttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaat 548  Q
    ||||||||||||||| |||||||||||||||| || ||| | || |||||||  ||| | | ||||  ||||||||||  ||||||  ||||||||||||    
T  20549189 tttttacctgtaattaaaccagagcatttccaaagacaaaataattcatacaagattgaaactcggatataaacaagataaatacaatatcttttacaat 20549090  T
Q  549 tgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaatattaaagagtgcttgaaattaaacaacacattaca 648  Q
    ||    ||||||||| || || | ||||  ||||||||| || || |||||||||||||||||| |||| | ||||     ||||||||||| |||||||    
T  20549089 tgttcataattaaattaaaccgaaatttggttaaaattaaacaaacgtttgaaattcatcaaaacattacaaagtgtccataattaaacaactcattaca 20548990  T
Q  649 tatcatta 656  Q
     |||||||    
T  20548989 catcatta 20548982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 449 - 608
Target Start/End: Original strand, 41238991 - 41239150
Alignment:
Q  449 tttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaat 548  Q
    |||| |||||||||| || ||||||||||| | | |||| | || ||||||| |||| |   |||| |||||||||||  ||||||  ||||||||||||    
T  41238991 ttttaacctgtaattaaagcagagcatttcgaaatgcaaaataattcatacaacattgaatctcggacataaacaagacaaatacaatatcttttacaat 41239090  T
Q  549 tgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatc 608  Q
    ||    |||||||||||| || |||||| ||| ||||||||| || ||||||||||||||    
T  41239091 tgttcataattaaatcaaaccgacatttgattcaaattacacaaacgtttgaaattcatc 41239150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 431 - 751
Target Start/End: Original strand, 30301256 - 30301585
Alignment:
Q  431 caagccatttttt--gcctatttttacctgtaattcaaccagagcatttccagaggcaatacaactcata--catcatttacaatcggtcataaacaaga 526  Q
    |||||||||||||  |||  ||||||||||||||| |||||||||||||||| ||| |||| || |||||   || ||| | | |||| |||||  ||||    
T  30301256 caagccattttttcggccagtttttacctgtaattaaaccagagcatttccaaaggtaatataattcatatgtatgattgaaactcggacataatgaaga 30301355  T
Q  527 acaatacataatcttttacaattgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaatattaaagagtgct 626  Q
      ||||||  ||||||||||||||    ||||||||| || || ||||||  ||||||||| ||  | |||||||||||||||||| |||| | ||||      
T  30301356 taaatacaatatcttttacaattgttcataattaaattaaaccgacatttggttaaaattaaacagacgtttgaaattcatcaaaacattacaaagtgtc 30301455  T
Q  627 tgaaattaaacaacacattacatatcattacataaaatatctatcgacattctacgcacatgcagatggaacgaacata-----aagatatattatcttc 721  Q
       |||||||| || ||||||| ||||||| || ||||  |||   |||||| | |||  | || ||||||||||||||     |  ||||||| |||||    
T  30301456 cataattaaactactcattacacatcattaaattaaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatattgtcttc 30301555  T
Q  722 aaccatattctgaaacataaatcctacgtc 751  Q
     ||||||||| ||||||||||||| |||||    
T  30301556 caccatattccgaaacataaatccgacgtc 30301585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 515 - 751
Target Start/End: Complemental strand, 22588306 - 22588065
Alignment:
Q  515 tcataaacaagaacaatacataatcttttacaattgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaata 614  Q
    ||||||||||||| ||||||  |||||||||||||  |  |||||||||||| || |||||   || ||||||||| || |||||||||| |||||||      
T  22588306 tcataaacaagaaaaatacaatatcttttacaattatccataattaaatcaaaccgacattaggttcaaattacacaaacgtttgaaattgatcaaaacg 22588207  T
Q  615 ttaaagagtgcttgaaattaaacaacacattacatatcattacataaaatatctatcgacattctacgcacatgcagatggaacgaacata-----aaga 709  Q
    ||| | ||||     ||||||||||| ||||||| ||||||| || ||||  |||   |||||| |||||  |||| || |||||||||||     |  |    
T  22588206 ttacaaagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatatataa 22588107  T
Q  710 tatattatcttcaaccatattctgaaacataaatcctacgtc 751  Q
    |||||||||||| ||||||||   |||||||||||| |||||    
T  22588106 tatattatcttccaccatatttcaaaacataaatccgacgtc 22588065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 709 - 771
Target Start/End: Original strand, 39751662 - 39751726
Alignment:
Q  709 atatattatcttcaaccatattctgaaacataaatcctacgt--ctatcgtcacgaataagccaa 771  Q
    ||||||||||||| ||||||||| ||||||||||||| ||||  |||||||| ||||||||||||    
T  39751662 atatattatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaa 39751726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 630 - 779
Target Start/End: Complemental strand, 43377028 - 43376872
Alignment:
Q  630 aattaaacaacacattacatatcattacataaaatatctatcgacattctacgcacatgcagatggaacgaacata-----aagatatattatcttcaac 724  Q
    ||||||||||| ||||||| ||||||| || ||||  |||   |||||| |||||  |||| ||||||||||||||     |  ||||||||||||| ||    
T  43377028 aattaaacaactcattacacatcattaaattaaattcctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccac 43376929  T
Q  725 catattctgaaacataaatcctacgt--ctatcgtcacgaataagccaatgcttata 779  Q
    ||||||| ||||||||||||  ||||  |||||||| ||||||| ||||||| ||||    
T  43376928 catattccgaaacataaatctgacgtcactatcgtcgcgaataaaccaatgcatata 43376872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 709 - 780
Target Start/End: Original strand, 41744231 - 41744304
Alignment:
Q  709 atatattatcttcaaccatattctgaaacataaatcctacgt--ctatcgtcacgaataagccaatgcttataa 780  Q
    ||||||||||||| ||||||||| |||| |||||||| ||||  ||||||||| ||||||||||| || |||||    
T  41744231 atatattatcttccaccatattccgaaatataaatccgacgtcgctatcgtcatgaataagccaaggcatataa 41744304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 449 - 750
Target Start/End: Complemental strand, 7344488 - 7344180
Alignment:
Q  449 tttttacctgtaattcaaccagagcatttccagaggcaatacaactcata--catcatttacaatcggtcataaacaagaacaatacataatcttttaca 546  Q
    ||||||||||||||| |||||||||||||||| ||| |||| || |||||   || ||| | | |||| |||||  ||||  ||||||  ||||||||||    
T  7344488 tttttacctgtaattaaaccagagcatttccaaaggtaatataattcatatgtatgattgaaactcggacataatgaagataaatacaatatcttttaca 7344389  T
Q  547 attgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaatattaaagagtgcttgaaattaaacaacacatta 646  Q
    ||||    ||||||||| || || ||||||  ||||||||| |   | |||||||||||||||||| |||| | ||||     |||||||| || |||||    
T  7344388 attgttcataattaaattaaaccgacatttggttaaaattaaatagacgtttgaaattcatcaaaacattacaaagtgtccataattaaactactcatta 7344289  T
Q  647 catatcattacataaaatatctatcgacattctacgcacatgcagatggaacgaacata-----aagatatattatcttcaaccatattctgaaacataa 741  Q
    || ||||||| || ||||  |||   |||||| | |||  | || ||||||||||||||     |  ||||||| ||||| ||||||||| |||||||||    
T  7344288 cacatcattaaattaaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatattgtcttccaccatattccgaaacataa 7344189  T
Q  742 atcctacgt 750  Q
    |||| ||||    
T  7344188 atccgacgt 7344180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 449 - 525
Target Start/End: Complemental strand, 7172541 - 7172465
Alignment:
Q  449 tttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaag 525  Q
    ||||||| ||||||| ||||||||||||| || |||||||| |||| ||||| |||||| | |  ||||||||||||    
T  7172541 tttttacttgtaattaaaccagagcattttcaaaggcaatataacttatacaacatttaaacttagtcataaacaag 7172465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 450 - 487
Target Start/End: Complemental strand, 1116144 - 1116107
Alignment:
Q  450 ttttacctgtaattcaaccagagcatttccagaggcaa 487  Q
    |||||||||||||| |||||||||||||||| ||||||    
T  1116144 ttttacctgtaattaaaccagagcatttccaaaggcaa 1116107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 709 - 771
Target Start/End: Complemental strand, 7171982 - 7171918
Alignment:
Q  709 atatattatcttcaaccatattctgaaacataaatcctacgt--ctatcgtcacgaataagccaa 771  Q
    ||||||||| ||| ||||||||| ||||||||||||  ||||  |||||||| ||||||||||||    
T  7171982 atatattattttccaccatattccgaaacataaatctgacgtcgctatcgtcgcgaataagccaa 7171918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 198; Significance: 1e-107; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 364 - 807
Target Start/End: Original strand, 25613259 - 25613710
Alignment:
Q  364 cggatccatcggcagttaactaccaatg-attcaattatacagacagtgacttctgcataatggttttcaagccattttttgcctattt-ttacctgtaa 461  Q
    ||||||||| || |||||||  |||||| ||||| |||| ||||||   | ||||| |||||| |||||||||||||||  |||||||| |||||||| |    
T  25613259 cggatccattggtagttaacagccaatgcattcatttatgcagacaacaagttctgaataatgattttcaagccattttcagcctatttattacctgtca 25613358  T
Q  462 ttcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaattgactgtaattaa 561  Q
    |||||||| | || |||||||||||||||||||||||||||||||| |||| |||||||||||||| ||||||||||||||||||||||||   ||||||    
T  25613359 ttcaaccacatcaattccagaggcaatacaactcatacatcatttaaaatcagtcataaacaagaa-aatacataatcttttacaattgaccaaaattaa 25613457  T
Q  562 atcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaatattaaagagtgcttgaaattaaacaacacattacatatcattacataa 661  Q
    |||||||   |||||  || |||||||| |||||||||||||||||||||||||||| ||||  |||||||||| |||||||||||||||||||||||||    
T  25613458 atcaatcaggcattttgtttaaattacaagaatgtttgaaattcatcaaaatattaatgagtatttgaaattaatcaacacattacatatcattacataa 25613557  T
Q  662 aatatctatcgacattctacgcacatgcagatggaacgaacataaag-----atatattatcttcaaccatattctgaaacataaatcctacgt--ctat 754  Q
    ||| ||||| ||||||||| |||||||||||||||||||||| ||||     |||||||||||| ||  ||||||  |||||||||||||||||  ||||    
T  25613558 aatctctattgacattctatgcacatgcagatggaacgaacacaaagatataatatattatctttaattatattcataaacataaatcctacgtcgctat 25613657  T
Q  755 cgtcacgaataagccaatgcttataaatcaccgttttccacatgtcttcatct 807  Q
    ||||||||||||| ||| ||  |||  || |||||||||||||||||||||||    
T  25613658 cgtcacgaataagtcaaggcacatagctcgccgttttccacatgtcttcatct 25613710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 490 - 713
Target Start/End: Complemental strand, 42809471 - 42809249
Alignment:
Q  490 caactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaattgactgtaattaaatcaatccaacatttcattaaaattaca 589  Q
    ||||||||||| || ||| ||||  |||||||| ||||||||||||||||||| ||||||||||  |||||||||||||  ||||||| | |||||||||    
T  42809471 caactcatacaccagttataatcaatcataaacgagaacaatacataatctttcacaattgactaaaattaaatcaatctcacatttcgt-aaaattaca 42809373  T
Q  590 cgaatgtttgaaattcatcaaaatattaaagagtgcttgaaattaaacaacacattacatatcattacataaaatatctatcgacattctacgcacatgc 689  Q
    ||||||||||||||||| ||||| || |||||||| |||||||||||||||||| |||||| ||||||||||||| ||||| |||||||||| |||||||    
T  42809372 cgaatgtttgaaattcaacaaaacataaaagagtgtttgaaattaaacaacacaatacataacattacataaaatctctattgacattctacacacatgc 42809273  T
Q  690 agatggaacgaacataaagatata 713  Q
    ||||||||| |||| |||||||||    
T  42809272 agatggaacaaacacaaagatata 42809249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 449 - 809
Target Start/End: Complemental strand, 45479751 - 45479384
Alignment:
Q  449 tttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaat 548  Q
    ||||||| ||||||| |||||||||||||||| |||||||| |||| ||||| |||||| | || |||||||||||| | ||||||  ||||||||||||    
T  45479751 tttttacttgtaatttaaccagagcatttccaaaggcaatataactaatacaacatttaaactcagtcataaacaagtaaaatacaatatcttttacaat 45479652  T
Q  549 tgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaatattaaagagtgcttgaaattaaacaacacattaca 648  Q
    ||    |||||||||||| || ||||||  || ||| ||||  || ||||||||||||||||||  ||| | ||||     |||||||||||||||||||    
T  45479651 tgttcataattaaatcaaaccgacatttggttcaaaatacaaaaaagtttgaaattcatcaaaacgttacatagtgtccataattaaacaacacattaca 45479552  T
Q  649 tatcattacataaaatatctatcgacattctacgcacatgcagatggaacgaacata-----aagatatattatcttcaaccatattctgaaacataaat 743  Q
     ||||||| || ||||  |||   |||||| |||||  |||| ||||||||||||||     |  ||||||||||||| |||||||||||||||||||||    
T  45479551 catcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctgaaacataaat 45479452  T
Q  744 cctacgtc--tatcgtcacgaataagccaatgcttataaatcaccgttttccacatgtcttcatctct 809  Q
    || ||| |  ||||||| |||||||||||| || ||||  |  ||||||||||  ||| |||||||||    
T  45479451 ccgacgccgatatcgtcgcgaataagccaaggcatatagcttgccgttttccatgtgtattcatctct 45479384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 449 - 771
Target Start/End: Original strand, 28342665 - 28342995
Alignment:
Q  449 tttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaat 548  Q
    |||||| |||||||| ||||||| |||||||| |||||||| || ||||||| |||| | | ||||||||||||||||| ||||||  ||||||||||||    
T  28342665 tttttatctgtaattaaaccagaacatttccaaaggcaatataaatcatacaacattgaaactcggtcataaacaagaaaaatacaatatcttttacaat 28342764  T
Q  549 tgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaatattaaagagtgcttgaaattaaacaacacattaca 648  Q
    || |  |||||||||||| || ||||||  || ||||||||| || ||||||||||||||||||  ||| | |||| |   ||||||||||  |||||||    
T  28342765 tgtccataattaaatcaaaccgacatttggttcaaattacacaaacgtttgaaattcatcaaaacgttacaaagtgttcataattaaacaattcattaca 28342864  T
Q  649 tatcattacataaaatatctatcgacattctacgcacatgcagatggaacgaacata-----aagatatattatcttcaaccatattctg-aaacataaa 742  Q
     ||||||| || ||||  |||   |||||| |||||  |||| ||||||||||||||     |  ||||||||||||| ||||||||| | |||||||||    
T  28342865 catcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattccgaaaacataaa 28342964  T
Q  743 tcctacgt--ctatcgtcacgaataagccaa 771  Q
    ||| ||||  |||||||| ||||||||||||    
T  28342965 tccgacgtcgctatcgtcgcgaataagccaa 28342995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 449 - 779
Target Start/End: Original strand, 41181553 - 41181890
Alignment:
Q  449 tttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaat 548  Q
    ||||||||||||||| |||||||||||||||| |||||||| || ||||||| |||| | | ||||||||||  ||||| ||||||  |||||||||| |    
T  41181553 tttttacctgtaattaaaccagagcatttccaaaggcaatataaatcatacaacattgaaactcggtcataactaagaaaaatacaatatcttttacagt 41181652  T
Q  549 tgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaatattaaagagtgcttgaaattaaacaacacattaca 648  Q
    || |  |||||||||||| || ||||||  || ||||||||| || ||||||||||||||||||  ||| | ||||     ||||||||||| |||||||    
T  41181653 tgtccataattaaatcaaaccgacatttggttcaaattacacaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaaacaactcattaca 41181752  T
Q  649 tatcattacataaaatatctatcgacattctacgcacatgcagatggaacgaacata-----aagatatattatcttcaaccatattctgaaacataaat 743  Q
     ||||||| || ||||  |||   |||||| |||||  | || ||||||||||||||     |  ||||||||||||| ||||||||| |||||||||||    
T  41181753 catcattaaattaaatccctacttacattcaacgcaattacatatggaacgaacatacatatataatatattatcttccaccatattccgaaacataaat 41181852  T
Q  744 cctacgt--ctatcgtcacgaataagccaatgcttata 779  Q
    || ||||  |||||||| || |||||||||||| ||||    
T  41181853 ccgacgtcgctatcgtcgcgtataagccaatgcatata 41181890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 449 - 612
Target Start/End: Original strand, 41052764 - 41052927
Alignment:
Q  449 tttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaat 548  Q
    ||||||||||||||| |||||||| ||||||| |||||||| || ||||||| |||| | | ||||||||||||||||| ||||||  ||||||||||||    
T  41052764 tttttacctgtaattaaaccagagtatttccaaaggcaatataaatcatacaacattgaaactcggtcataaacaagaaaaatacaatatcttttacaat 41052863  T
Q  549 tgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaa 612  Q
    || |  |||||||||||| || ||||||  || ||||||||| || ||||||||||||||||||    
T  41052864 tgtccataattaaatcaaaccgacatttggttcaaattacacaaacgtttgaaattcatcaaaa 41052927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 479 - 713
Target Start/End: Complemental strand, 27733208 - 27732975
Alignment:
Q  479 cagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaattgactgtaattaaatcaatccaacatttca 578  Q
    |||||||| ||||||| ||||| || ||| |||| | | ||||||||| ||||||||||||||| |||||||||   |||||||||||| | |||||||     
T  27733208 cagaggcagtacaactaatacaccaattataatcagccgtaaacaagatcaatacataatctttcacaattgaccaaaattaaatcaattcgacatttcg 27733109  T
Q  579 ttaaaattacacgaatgtttgaaattcatcaaaatattaaagagtgcttgaaattaaacaacacattacatatcattacataaaatatctatcgacattc 678  Q
    ||||||||| | |||||||| |||| || ||||| | | ||||||| | ||| |  |||||||||||||||| |||||||| |||| ||||  ||||||     
T  27733108 ttaaaattatatgaatgttttaaatacaacaaaaca-tgaagagtgttcgaactcgaacaacacattacataacattacatgaaatctctactgacatta 27733010  T
Q  679 tacgcacatgcagatggaacgaacataaagatata 713  Q
    | ||||| ||||| ||||||||||| |||||||||    
T  27733009 tgcgcacgtgcagttggaacgaacacaaagatata 27732975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 449 - 658
Target Start/End: Original strand, 41004669 - 41004878
Alignment:
Q  449 tttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaat 548  Q
    ||||||||||||||| ||||  |||||||||| || ||||| || ||||||| |||| | | ||||||||||||||||| |||| |  ||||||||||||    
T  41004669 tttttacctgtaattaaaccgaagcatttccaaagacaatataaatcatacaacattgaaactcggtcataaacaagaaaaatataatatcttttacaat 41004768  T
Q  549 tgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaatattaaagagtgcttgaaattaaacaacacattaca 648  Q
    || || |||||||||||| |||||||||  || ||||||||| || ||||||||||||||||||  ||| | ||||     |||||||||||||||||||    
T  41004769 tgtctataattaaatcaaaccaacatttggtttaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccataattaaacaacacattaca 41004868  T
Q  649 tatcattaca 658  Q
      ||||||||    
T  41004869 actcattaca 41004878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 449 - 612
Target Start/End: Complemental strand, 9659986 - 9659823
Alignment:
Q  449 tttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaat 548  Q
    ||||||||| ||||| |||||||||||||||| |||||||| || ||||||| |||| | | ||||||||||||||||| ||||||  ||||||||||||    
T  9659986 tttttacctttaattaaaccagagcatttccaaaggcaatataaatcatacaacattgaaactcggtcataaacaagaaaaatacaatatcttttacaat 9659887  T
Q  549 tgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaa 612  Q
    || |  ||||||||||||  | ||||||  |||||||||||| || | ||||||||||||||||    
T  9659886 tgtccataattaaatcaaaacgacatttggttaaaattacacaaacgcttgaaattcatcaaaa 9659823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 449 - 612
Target Start/End: Original strand, 24601782 - 24601945
Alignment:
Q  449 tttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaat 548  Q
    ||||||| ||||||| |||||||||||||||| |||||||| || ||||||| |||| | | ||||||||||||||||| ||||||  ||||||||||||    
T  24601782 tttttacttgtaattaaaccagagcatttccaaaggcaatataaatcatacaacattgaaactcggtcataaacaagaaaaatacaatatcttttacaat 24601881  T
Q  549 tgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaa 612  Q
    || |  |||||||||||| || ||||||  || |||||||||  | ||||||||||||||||||    
T  24601882 tgtccataattaaatcaaaccgacatttggttcaaattacacagacgtttgaaattcatcaaaa 24601945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 449 - 612
Target Start/End: Complemental strand, 24612332 - 24612169
Alignment:
Q  449 tttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaat 548  Q
    ||||||| ||||||| |||||||||||||||| |||||||| || ||||||| |||| | | ||||||||||||||||| ||||||  ||||||||||||    
T  24612332 tttttacttgtaattaaaccagagcatttccaaaggcaatataaatcatacaacattgaaactcggtcataaacaagaaaaatacaatatcttttacaat 24612233  T
Q  549 tgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaa 612  Q
    || |  |||||||||||| || ||||||  || |||||||||  | ||||||||||||||||||    
T  24612232 tgtccataattaaatcaaaccgacatttggttcaaattacacagacgtttgaaattcatcaaaa 24612169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 449 - 611
Target Start/End: Complemental strand, 439752 - 439592
Alignment:
Q  449 tttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaat 548  Q
    ||||||||||||||| |||||| ||||||||| |||||||| || ||||||| |||| | | ||||||||||||||||  ||||||  ||||||||||||    
T  439752 tttttacctgtaattaaaccagcgcatttccaaaggcaatataaatcatacaacattgaaactcggtcataaacaaga--aatacaatatcttttacaat 439655  T
Q  549 tgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaa 611  Q
    || |  |||||||||||| || ||||||  || ||||||||| || |||||||||||||||||    
T  439654 tgtccataattaaatcaaaccgacatttggttcaaattacacaaacgtttgaaattcatcaaa 439592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 449 - 612
Target Start/End: Original strand, 43943832 - 43943997
Alignment:
Q  449 tttttacctgtaattcaaccagagcatttccagaggcaa--tacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttaca 546  Q
    ||||||||||||||| |||||||||||||||| ||||||  || || ||||||| |||| | | ||||||||||||||||| ||||||  ||||||||||    
T  43943832 tttttacctgtaattaaaccagagcatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaacaagaaaaatacaatatcttttaca 43943931  T
Q  547 attgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaa 612  Q
    |||| |  |||||||||||| || ||||||  || ||||||||  || ||||||||||||||||||    
T  43943932 attgtccataattaaatcaaaccgacatttggttcaaattacaaaaaagtttgaaattcatcaaaa 43943997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 459 - 658
Target Start/End: Original strand, 12905672 - 12905871
Alignment:
Q  459 taattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaattgactgtaat 558  Q
    ||||| |||||||||||||||| |||||||| |||||||||| |||||| | || |||||||||||| | ||||||  || ||||||||||| |  ||||    
T  12905672 taatttaaccagagcatttccaaaggcaatataactcatacaacatttaaactcagtcataaacaagtaaaatacaatatattttacaattgtccataat 12905771  T
Q  559 taaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaatattaaagagtgcttgaaattaaacaacacattacatatcattaca 658  Q
    |||||||| || ||||||  || ||| ||||| || ||||||||||||||||||  ||| | ||||     |||||||||||||||||||  ||||||||    
T  12905772 taaatcaaaccgacatttggttcaaaatacacaaaagtttgaaattcatcaaaacgttacatagtgtcaataattaaacaacacattacaactcattaca 12905871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 431 - 612
Target Start/End: Original strand, 1096692 - 1096875
Alignment:
Q  431 caagccatttttt--gcctatttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaac 528  Q
    |||||||||||||  |||  ||||||||||||||| |||||||||||||||| |||||| | || ||||||| |||| | | |||| |||||||||||      
T  1096692 caagccattttttcggccagtttttacctgtaattaaaccagagcatttccaaaggcaaaataattcatacaacattaaaactcggacataaacaagata 1096791  T
Q  529 aatacataatcttttacaattgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaa 612  Q
    ||||||  |||||||||||||| |  ||||||||| || || ||||||  || ||| ||||| || ||||||||||||||||||    
T  1096792 aatacagtatcttttacaattgtccataattaaattaaaccgacatttggttcaaactacacaaacgtttgaaattcatcaaaa 1096875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 449 - 604
Target Start/End: Complemental strand, 25184761 - 25184606
Alignment:
Q  449 tttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaat 548  Q
    ||||||||||||||| |||||||| |||| || |||||||| || ||||||| |||| | | ||||||||||||||||| ||||||  ||||||||||||    
T  25184761 tttttacctgtaattaaaccagagtattttcaaaggcaatataaatcatacaacattgaaactcggtcataaacaagaaaaatacaatatcttttacaat 25184662  T
Q  549 tgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaatt 604  Q
    || |  |||||||||||| || | ||||  || ||||||||| || ||||||||||    
T  25184661 tgtccataattaaatcaaaccgatatttggttcaaattacacaaacgtttgaaatt 25184606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 488 - 599
Target Start/End: Original strand, 43668303 - 43668414
Alignment:
Q  488 tacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaattgactgtaattaaatcaatccaacatttcattaaaatta 587  Q
    ||||||||| |||||| ||| |||| ||||||||||||||||||||||||||||| |||| ||||   |||||||||||||  | |||||||||||||||    
T  43668303 tacaactcacacatcaattataatcagtcataaacaagaacaatacataatctttcacaactgaccaaaattaaatcaatctgatatttcattaaaatta 43668402  T
Q  588 cacgaatgtttg 599  Q
    ||| ||||||||    
T  43668403 cacaaatgtttg 43668414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 431 - 751
Target Start/End: Complemental strand, 7267394 - 7267067
Alignment:
Q  431 caagccatttttt--gcctatttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaac 528  Q
    |||||||||||||  |||  ||||||||||||||| |||||||||||||||| |||||| | || | |||||  ||| | | |||| |||||  ||||      
T  7267394 caagccattttttcggccagtttttacctgtaattaaaccagagcatttccaaaggcaaaataatttatacaagattgaaactcggacataatgaagata 7267295  T
Q  529 aatacataatcttttacaattgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaatattaaagagtgcttg 628  Q
    | ||||  ||||||||||||||    ||||||||| || || ||||||  ||||||||| || || |||||||||||||||||| |||| | ||||        
T  7267294 agtacaatatcttttacaattgttcataattaaattaaacctacatttggttaaaattaaacaaacgtttgaaattcatcaaaacattacaaagtgtcca 7267195  T
Q  629 aaattaaacaacacattacatatcattacataaaatatctatcgacattctacgcacatgcagatggaacgaacata-----aagatatattatcttcaa 723  Q
     |||||||| || ||||||| ||||||| || |||| ||||   |||||| |||||  | || ||||||||||||||     |  ||||||||||||| |    
T  7267194 taattaaactactcattacacatcattaaattaaatctctacttacattcaacgcaattacatatggaacgaacatacatatataatatattatcttcca 7267095  T
Q  724 ccatattctgaaacataaatcctacgtc 751  Q
    |||||||| ||||||||||||| |||||    
T  7267094 ccatattccgaaacataaatccgacgtc 7267067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 449 - 609
Target Start/End: Original strand, 10825361 - 10825521
Alignment:
Q  449 tttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaat 548  Q
    ||||||||||||||| |||||||||||||| | |||||| |||| ||||||| |||| | | || | |||||||||||  ||||||  ||||||||||||    
T  10825361 tttttacctgtaattaaaccagagcatttcgaaaggcaaaacaattcatacaacattgaaactcagacataaacaagataaatacaatatcttttacaat 10825460  T
Q  549 tgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatca 609  Q
    || |  |||||||||||| |  ||||||  || ||||||||| || |||||||||||||||    
T  10825461 tgtccataattaaatcaaacagacatttggttcaaattacacaaacgtttgaaattcatca 10825521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 431 - 743
Target Start/End: Complemental strand, 24753974 - 24753655
Alignment:
Q  431 caagccatttttt--gcctatttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaac 528  Q
    |||||||||||||  |||  ||||||||||||||| |||||||||||||||| |||||| | || |||||||  ||| | | | || |||||||||||      
T  24753974 caagccattttttcggccagtttttacctgtaattaaaccagagcatttccaaaggcaaaataattcatacaagattgaaactgggacataaacaagata 24753875  T
Q  529 aatacataatcttttacaattgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaatattaaagagtgcttg 628  Q
    ||||||  |||||||||||||     ||||||||| || || ||||||  ||||||||| || || |||||||||||||||||| |||| | ||||        
T  24753874 aatacaatatcttttacaatttttcataattaaattaaaccgacatttggttaaaattaaacaaacgtttgaaattcatcaaaacattacaaagtgtcca 24753775  T
Q  629 aaattaaacaacacattacatatcattacataaaatatctatcgacattctacgcacatgcagatggaacgaacata-----aagatatattatcttcaa 723  Q
     ||||||||||| ||||||| ||||||| || ||||  |||   |||||| |||||  |||| ||||||| ||||||     |  ||||||||| ||| |    
T  24753774 taattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacaaacatacatatataatatattattttcca 24753675  T
Q  724 ccatattctgaaacataaat 743  Q
    |||||||| |||||||||||    
T  24753674 ccatattccgaaacataaat 24753655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 449 - 609
Target Start/End: Complemental strand, 39951101 - 39950941
Alignment:
Q  449 tttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaat 548  Q
    |||||| |||||||| |||||||||||||| | |||||| |||| ||||||| |||| | | |||| |||||||||||  ||||||  ||||||||||||    
T  39951101 tttttatctgtaattaaaccagagcatttcgaaaggcaaaacaattcatacaacattgaaactcggacataaacaagataaatacaatatcttttacaat 39951002  T
Q  549 tgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatca 609  Q
    || |  |||||||||||| || ||||||  || ||||||||| || |||| ||||||||||    
T  39951001 tgtccataattaaatcaaaccgacatttggttcaaattacacaaacgtttaaaattcatca 39950941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 449 - 612
Target Start/End: Complemental strand, 82193 - 82031
Alignment:
Q  449 tttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaat 548  Q
    ||||||||||||||| |||||||||||||| | ||||| || || |||| || |||  | | | ||||||||||||||| ||||||  ||||||||||||    
T  82193 tttttacctgtaattaaaccagagcatttctaaaggcagtataaatcatccaacatcaaaacttggtcataaacaagaaaaatacaatatcttttacaat 82094  T
Q  549 tgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaa 612  Q
    || |  || ||||||||| || |||||| ||| ||||||||| || ||||||||||||||||||    
T  82093 tgtccata-ttaaatcaaaccgacatttgattcaaattacacaaacgtttgaaattcatcaaaa 82031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 626 - 763
Target Start/End: Original strand, 43668416 - 43668560
Alignment:
Q  626 ttgaaattaaacaacacattacatatcattacataaaatatctatcgacattctacgcacatgcagatggaacgaacataaag-----atatattatctt 720  Q
    ||||||||||||||||||||||||| ||||||||||||| | ||  ||| || | || ||||||||||||||| || | ||||     ||||||||||||    
T  43668416 ttgaaattaaacaacacattacataacattacataaaatctttactgactttttgcgtacatgcagatggaactaatacaaagatataatatattatctt 43668515  T
Q  721 caaccatattctgaaacataaatcctacgt--ctatcgtcacgaa 763  Q
    ||||||||| |  |||||||||||||||||  |||||||||||||    
T  43668516 caaccatatgcctaaacataaatcctacgtcactatcgtcacgaa 43668560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 448 - 617
Target Start/End: Complemental strand, 38950497 - 38950328
Alignment:
Q  448 atttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaa 547  Q
    |||||||||||||||| |||||||||||||||| ||| |||| || |||||||  ||| | | |||| |||||  ||||  ||||||  |||||||||||    
T  38950497 atttttacctgtaattaaaccagagcatttccaaaggtaatataattcatacaagattgaaactcggacataatgaagataaatacaatatcttttacaa 38950398  T
Q  548 ttgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaatatta 617  Q
    |||    ||||||||| || || ||||||  ||||||||| || || |||||||||||||||||| ||||    
T  38950397 ttgttcataattaaattaaaccgacatttggttaaaattaaacaaacgtttgaaattcatcaaaacatta 38950328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 449 - 609
Target Start/End: Original strand, 32952873 - 32953033
Alignment:
Q  449 tttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaat 548  Q
    ||||||||||||||| || ||||||||||| | |||||| | || ||||||| |||| | | || | ||| |||||||| ||||||  || |||||||||    
T  32952873 tttttacctgtaattaaagcagagcatttcgaaaggcaaaataattcatacaacattgaaactcagacatcaacaagaaaaatacaatattttttacaat 32952972  T
Q  549 tgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatca 609  Q
    || |  ||||||||| || || ||||||  || ||||||||| || |||||||||||||||    
T  32952973 tgtccataattaaattaaaccgacatttggttcaaattacacaaacgtttgaaattcatca 32953033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 431 - 611
Target Start/End: Original strand, 3795459 - 3795641
Alignment:
Q  431 caagccatttttt--gcctatttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaac 528  Q
    |||||||||||||  |||  ||||||||||||||| |||||||||||||||| |||||| | || |||||||  ||| | | |||| |||||  ||||      
T  3795459 caagccatttttttggccagtttttacctgtaattaaaccagagcatttccaaaggcaaaataattcatacaagattgaaactcggacataatgaagata 3795558  T
Q  529 aatacataatcttttacaattgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaa 611  Q
    | ||||  ||||||||||||||    ||||||||| || || ||||||  ||||||||| || || |||||||||||||||||    
T  3795559 agtacaatatcttttacaattgttcataattaaattaaaccgacatttggttaaaattaaacaaacgtttgaaattcatcaaa 3795641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 431 - 751
Target Start/End: Complemental strand, 39798389 - 39798063
Alignment:
Q  431 caagccatttttt--gcctatttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaac 528  Q
    |||||||||||||  |||  ||||||||||||||| |||||||  ||||||| |||  | | || |||||||  ||| | | |||||||||| |||||      
T  39798389 caagccattttttcggccagtttttacctgtaattaaaccagacaatttccaaaggttaaataattcatacaatattgaaactcggtcataatcaagata 39798290  T
Q  529 aatacataatcttttacaattgactgtaattaaatcaatccaacatttca-ttaaaattacacgaatgtttgaaattcatcaaaatattaaagagtgctt 627  Q
    ||| ||  ||||||||||||||    ||||||||| || || ||||||   |||| |||| || || |||||||||||||||||| |||| | ||| | |    
T  39798289 aatgcaatatcttttacaattgttcataattaaattaaaccgacattttggttaacattaaacaaacgtttgaaattcatcaaaacattacaaagtccat 39798190  T
Q  628 gaaattaaacaacacattacatatcattacataaaatatctatcgacattctacgcacatgcagatggaacgaacata-----aagatatattatcttca 722  Q
      |||||||| || ||||||| ||||||| || |||| ||||   |||||| |||||  | || ||||||||||||||     |  |||||||||||||     
T  39798189 --aattaaactactcattacacatcattaaattaaatctctacttacattcaacgcaattacatatggaacgaacatacatatataatatattatcttcc 39798092  T
Q  723 accatattctgaaacataaatcctacgtc 751  Q
    ||||||||| ||||||||||||| |||||    
T  39798091 accatattccgaaacataaatccgacgtc 39798063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 515 - 612
Target Start/End: Original strand, 3206956 - 3207053
Alignment:
Q  515 tcataaacaagaacaatacataatcttttacaattgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaa 612  Q
    |||||||||||||  |||||| |||||||||||||| || |||||||||||| || ||||||  || ||| || || || ||||||||||||||||||    
T  3206956 tcataaacaagaaagatacattatcttttacaattgtctataattaaatcaaaccgacatttagttcaaagtatacaaaagtttgaaattcatcaaaa 3207053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 630 - 771
Target Start/End: Original strand, 24601977 - 24602123
Alignment:
Q  630 aattaaacaacacattacatatcattacataaaatatctatcgacattctacgcacatgcagatggaacgaacata---aagatatattatcttcaacca 726  Q
    ||||||||||| ||||||| ||||||| || ||||  |||   |||||| |||||  |||| ||||||||||||||   |  ||||||||||||| ||||    
T  24601977 aattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatatatataatatattatcttccacca 24602076  T
Q  727 tattctgaaacataaatcctacgt--ctatcgtcacgaataagccaa 771  Q
    ||||| |||| |||||||| ||||  |||||||| ||||||||||||    
T  24602077 tattccgaaaaataaatccgacgttgctatcgtcgcgaataagccaa 24602123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 630 - 771
Target Start/End: Complemental strand, 24612137 - 24611991
Alignment:
Q  630 aattaaacaacacattacatatcattacataaaatatctatcgacattctacgcacatgcagatggaacgaacata---aagatatattatcttcaacca 726  Q
    ||||||||||| ||||||| ||||||| || ||||  |||   |||||| |||||  |||| ||||||||||||||   |  ||||||||||||| ||||    
T  24612137 aattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatatatataatatattatcttccacca 24612038  T
Q  727 tattctgaaacataaatcctacgt--ctatcgtcacgaataagccaa 771  Q
    ||||| |||| |||||||| ||||  |||||||| ||||||||||||    
T  24612037 tattccgaaaaataaatccgacgttgctatcgtcgcgaataagccaa 24611991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 449 - 609
Target Start/End: Original strand, 29398052 - 29398208
Alignment:
Q  449 tttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaat 548  Q
    ||||||||||||||| || ||||||||||| | |||||| | || ||||||| |||| | | |||| |||    ||||| ||||||  || |||||||||    
T  29398052 tttttacctgtaattaaagcagagcatttcgaaaggcaaaataattcatacaacattgaaactcggacat----aagaaaaatacaatattttttacaat 29398147  T
Q  549 tgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatca 609  Q
    || |  ||||||||| || || ||||||  || ||||||||| ||||||||||||||||||    
T  29398148 tgtccataattaaattaaaccgacatttagttcaaattacacaaatgtttgaaattcatca 29398208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 431 - 751
Target Start/End: Complemental strand, 41564442 - 41564113
Alignment:
Q  431 caagccatttttt--gcctatttttacctgtaattcaaccagagcatttccagaggcaatacaactcata--catcatttacaatcggtcataaacaaga 526  Q
    |||||||||||||  |||  ||||||||||||||| |||||||||||||||| ||| |||| || |||||   || ||| | | |||| |||||  ||||    
T  41564442 caagccattttttcggccagtttttacctgtaattaaaccagagcatttccaaaggtaatataattcatatgtatgattgaaactcggacataatgaaga 41564343  T
Q  527 acaatacataatcttttacaattgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaatattaaagagtgct 626  Q
      ||||||  ||||||||||||||    ||||||||| || || ||||||  ||||||||| ||  | |||||||||||||||||| |||| | ||||      
T  41564342 taaatacaatatcttttacaattgttcataattaaattaaaccgacatttggttaaaattaaacagacgtttgaaattcatcaaaacattacaaagtgtc 41564243  T
Q  627 tgaaattaaacaacacattacatatcattacataaaatatctatcgacattctacgcacatgcagatggaacgaacata-----aagatatattatcttc 721  Q
       |||||||| || ||||||| ||||||| || ||||  |||   |||||| | |||  | || ||||||||||||||     |  ||||||| |||||    
T  41564242 cataattaaactactcattacacatcattaaattaaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatattgtcttc 41564143  T
Q  722 aaccatattctgaaacataaatcctacgtc 751  Q
     ||||||||| ||||||||||||| |||||    
T  41564142 caccatattccgaaacataaatccgacgtc 41564113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 630 - 771
Target Start/End: Complemental strand, 9659791 - 9659641
Alignment:
Q  630 aattaaacaacacattacatatcattacataaaatatctatcgacattctacgcacatgcagatggaacgaacata-------aagatatattatcttca 722  Q
    ||||||||||| ||||||| ||||||| || ||||| |||   |||||| |||||  |||| || |||||||||||       || |||||||||||||     
T  9659791 aattaaacaactcattacacatcattaaattaaatacctacttacattcaacgcaattgcatattgaacgaacatacaaatataaaatatattatcttcc 9659692  T
Q  723 accatattctgaaacataaatcctacgt--ctatcgtcacgaataagccaa 771  Q
    ||||||||| ||||||||||  | ||||  |||||||||||||||||||||    
T  9659691 accatattccgaaacataaactcgacgtcgctatcgtcacgaataagccaa 9659641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 709 - 771
Target Start/End: Original strand, 12905937 - 12906001
Alignment:
Q  709 atatattatcttcaaccatattctgaaacataaatcctacgt--ctatcgtcacgaataagccaa 771  Q
    ||||||||||||| ||||||||| ||||||||||||| ||||  |||||||| ||||||||||||    
T  12905937 atatattatcttccaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaa 12906001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 709 - 771
Target Start/End: Original strand, 41053041 - 41053105
Alignment:
Q  709 atatattatcttcaaccatattctgaaacataaatcctacgt--ctatcgtcacgaataagccaa 771  Q
    ||||||||||||| ||||||||| ||||||||||||| ||||  |||||||| ||||||||||||    
T  41053041 atatattatcttccaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaa 41053105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 630 - 794
Target Start/End: Original strand, 1096907 - 1097078
Alignment:
Q  630 aattaaacaacacattacatatcattacataaaatatctatcgacattctacgcacatgcagatggaacgaacata-----aagatatattatcttcaac 724  Q
    ||||||||||| ||||||||||||||| || ||||  |||   |||||| |||||  |||| ||||||||||||||     |  ||||||||||||| ||    
T  1096907 aattaaacaactcattacatatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccac 1097006  T
Q  725 catattctgaaacataaatcctacgt--ctatcgtcacgaataagccaatgcttataaatcaccgttttcca 794  Q
    ||||||| ||||||||||| | ||||  |||||||| | |||||||| | || ||||| |  ||||||||||    
T  1097007 catattccgaaacataaattcgacgtcgctatcgtcgcaaataagcccaagcatataacttgccgttttcca 1097078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 709 - 751
Target Start/End: Original strand, 3795758 - 3795800
Alignment:
Q  709 atatattatcttcaaccatattctgaaacataaatcctacgtc 751  Q
    ||||||||||||| ||||||||||||||||||||||| |||||    
T  3795758 atatattatcttccaccatattctgaaacataaatccgacgtc 3795800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 709 - 751
Target Start/End: Complemental strand, 81915 - 81873
Alignment:
Q  709 atatattatcttcaaccatattctgaaacataaatcctacgtc 751  Q
    ||||||||| ||||||||||||| ||||||||||||| |||||    
T  81915 atatattattttcaaccatattccgaaacataaatccgacgtc 81873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 709 - 751
Target Start/End: Complemental strand, 38949851 - 38949809
Alignment:
Q  709 atatattatcttcaaccatattctgaaacataaatcctacgtc 751  Q
    ||||||||||||| ||||||||| ||||||||||||| |||||    
T  38949851 atatattatcttccaccatattccgaaacataaatccgacgtc 38949809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 673 - 779
Target Start/End: Original strand, 43944068 - 43944181
Alignment:
Q  673 acattctacgcacatgcagatggaacgaacataaagatata-----ttatcttcaaccatattctgaaacataaatcctacgt--ctatcgtcacgaata 765  Q
    |||||| |||||  |||| |||||||||||||| | |||||     |||||||| ||||||||| ||||||||||||  ||||  ||||| || ||||||    
T  43944068 acattcaacgcaattgcatatggaacgaacatacatatatattatattatcttccaccatattccgaaacataaatctgacgtcgctatcatcgcgaata 43944167  T
Q  766 agccaatgcttata 779  Q
    ||||||||| ||||    
T  43944168 agccaatgcatata 43944181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 448 - 505
Target Start/End: Complemental strand, 7189884 - 7189827
Alignment:
Q  448 atttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatt 505  Q
    |||||||||||||||| |||||||||||||| | |||||  |||| ||||||| ||||    
T  7189884 atttttacctgtaattaaaccagagcatttcgaaaggcagaacaattcatacaacatt 7189827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 158; Significance: 1e-83; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 158; E-Value: 1e-83
Query Start/End: Original strand, 349 - 807
Target Start/End: Complemental strand, 20448818 - 20448353
Alignment:
Q  349 acagttaagtgccgccggatccatcggcagttaactaccaatgattcaa--ttatacagacagtgacttctgcataatggttttcaagccattttttgcc 446  Q
    |||||||||||||| ||||||||||| ||||||| |  ||| ||   ||  |||| ||||||||||||||||||||||      |||||||||||  |||    
T  20448818 acagttaagtgccgtcggatccatcgacagttaattgtcaaggaaaaaaaattatgcagacagtgacttctgcataattcaac-caagccattttcggcc 20448720  T
Q  447 tatttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttaca 546  Q
    |||||||| |||||||||||||||||||||| ||||||||||| |||||||||| |||||| | |  |||||||||||||| ||||||| ||||||||||    
T  20448719 tatttttatctgtaattcaaccagagcatttacagaggcaatataactcatacaccatttatacttagtcataaacaagaagaatacattatcttttaca 20448620  T
Q  547 attgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaatattaaagagtgcttgaaattaaacaacacatta 646  Q
     ||| |  ||||||||||||||| ||||||| ||||||||| | ||||||||||||||||| |||| |||||||||||     ||||||||||||||||     
T  20448619 gttgtccataattaaatcaatccgacatttcgttaaaattagaggaatgtttgaaattcataaaaacattaaagagtgtccataattaaacaacacattt 20448520  T
Q  647 catatcattacataaaatatctatcgacattctacgcacatgcagatggaacgaacata-----aagatatattatcttcaaccatattctgaaacataa 741  Q
    ||||||||||||||||||||||||||||||||||| ||  |||| ||| ||| |||| |     |  ||||||||||||||| ||||| |  ||||||||    
T  20448519 catatcattacataaaatatctatcgacattctacacatttgcaaatgtaacaaacacacatatataatatattatcttcaa-catatacctaaacataa 20448421  T
Q  742 atcctacgt--ctatcgtcacgaataagccaatgcttataaatcaccgttttccacatgtcttcatct 807  Q
    ||   ||||  ||||||||||||||||||||| ||| ||||||  || ||||||||||||||||||||    
T  20448420 atgaaacgtcgctatcgtcacgaataagccaaggctcataaatatccattttccacatgtcttcatct 20448353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 115; E-Value: 6e-58
Query Start/End: Original strand, 394 - 666
Target Start/End: Original strand, 19129066 - 19129334
Alignment:
Q  394 tcaattatacagacagtgacttctgcataatggttttcaagccattttttgcctatttttacctgtaattcaaccagagcatttccagaggcaatacaac 493  Q
    |||||||| ||||||||  |||||| ||||||| || ||| |||||||   ||||||||||||||||||| ||||| | |||||||||| |||||| |||    
T  19129066 tcaattatgcagacagtcgcttctgaataatggatt-caaaccattttcgacctatttttacctgtaattaaaccacaacatttccagatgcaataaaac 19129164  T
Q  494 tcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaattgactgtaattaaatcaatccaacatttcattaaaattacacgaa 593  Q
    ||| ||| |||||| | || ||||||||||||||   | ||| |||||||||| ||| |  ||||||||||||||  ||||||| || ||||||||||||    
T  19129165 tcacacaccatttatactcagtcataaacaagaa---tgcattatcttttacagttgtccataattaaatcaatctgacatttcgttgaaattacacgaa 19129261  T
Q  594 tgtttgaaattcatcaaaatattaaagagtgcttgaaattaaacaacacattacatatcattacataaaatat 666  Q
    ||||||||||||||||||| |||||| |||| |||||||||||||||||| || |||||||||||||||||||    
T  19129262 tgtttgaaattcatcaaaacattaaatagtgtttgaaattaaacaacacactatatatcattacataaaatat 19129334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 449 - 624
Target Start/End: Complemental strand, 20439935 - 20439760
Alignment:
Q  449 tttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaat 548  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| | |  |||||||||||||  ||||||| |||||||||| |    
T  20439935 tttttacctgttattcaaccagagcatttccagaggcaatacaactcatacaccatttatacttagtcataaacaagaggaatacattatcttttacagt 20439836  T
Q  549 tgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaatattaaagagtg 624  Q
    || |  ||||||||||||||| ||||||  ||||||||||| ||||||||||||||||| |||| |||||||||||    
T  20439835 tgtccataattaaatcaatccgacattttgttaaaattacaggaatgtttgaaattcatgaaaacattaaagagtg 20439760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 432 - 744
Target Start/End: Original strand, 34230605 - 34230923
Alignment:
Q  432 aagccattttttgcctatttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaat 531  Q
    ||||||||||  |||  ||||||||| |||||||||||||  |||| || |||||||   | || |||| |||||| | || |||||||| || || |||    
T  34230605 aagccattttcggccagtttttacctataattcaaccagattatttgcaaaggcaattatagtcgtacaacatttatactcagtcataaagaataaaaat 34230704  T
Q  532 acataatcttttacaattgactgtaattaaatcaatccaacatttcattaaaattacacgaatg-tttgaaattcatcaaaatattaaagagtgcttgaa 630  Q
    |||| |||||||||||||| || |||||||||||| || ||||||| ||||||||||| ||||| ||||||||||||||||| |||||||||||     |    
T  34230705 acattatcttttacaattgtctataattaaatcaaaccgacatttcgttaaaattacatgaatgctttgaaattcatcaaaacattaaagagtgtccata 34230804  T
Q  631 attaaacaacacattacatatcattacataaaatatctatcgacattctacgcacatgcagatggaacgaacata-----aagatatattatcttcaacc 725  Q
    |||||||||||||||||| ||| ||| || |||| ||||   ||||||||| ||  |||||||||||||||||||     |  ||||||||||||| |||    
T  34230805 attaaacaacacattacacatcgttaaattaaatctctactaacattctacacagttgcagatggaacgaacatacatatataatatattatcttctacc 34230904  T
Q  726 atattctgaaacataaatc 744  Q
    ||||||| |||||||||||    
T  34230905 atattctaaaacataaatc 34230923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 449 - 624
Target Start/End: Complemental strand, 20436227 - 20436052
Alignment:
Q  449 tttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaat 548  Q
    ||||||||||| |||||||||||||||||||||||  ||||||| ||||||| |||||| | |  |||||||||||||  ||||||| |||||||||| |    
T  20436227 tttttacctgttattcaaccagagcatttccagagaaaatacaattcatacaccatttatacttagtcataaacaagaggaatacattatcttttacagt 20436128  T
Q  549 tgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaatattaaagagtg 624  Q
    || |  | ||||||||||||| |||||| |||||||||||| ||||||||||||||||| |||| |||||||||||    
T  20436127 tgtccatgattaaatcaatccgacattttattaaaattacatgaatgtttgaaattcatgaaaacattaaagagtg 20436052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 449 - 771
Target Start/End: Original strand, 29286345 - 29286674
Alignment:
Q  449 tttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaat 548  Q
    ||||||| ||||||| ||||||||||||| || |||||||| || ||||||| | || | | |||||| |||||||||| ||||||  ||||||||||||    
T  29286345 tttttacttgtaattaaaccagagcattttcaaaggcaatataaatcatacaacgttgaaactcggtcttaaacaagaaaaatacaatatcttttacaat 29286444  T
Q  549 tgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaatattaaagagtgcttgaaattaaacaacacattaca 648  Q
    || |  |||||||||||| || ||||||  || ||||||||| || ||||||||||||||||||  ||| | ||||     ||||||||||| |||||||    
T  29286445 tgtccataattaaatcaaaccgacatttggttcaaattacacaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaaacaactcattaca 29286544  T
Q  649 tatcattacataaaatatctatcgacattctacgcacatgcagatggaacgaacata-----aagatatattatcttcaaccatattctgaaacataaat 743  Q
     ||||||| || |||  ||||   |||||| |||||  |||| ||||||||||||||     |  ||||||||||||| ||||||||| |||||||||||    
T  29286545 catcattaaattaaacctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattccgaaacataaat 29286644  T
Q  744 cctacgt--ctatcgtcacgaataagccaa 771  Q
    || ||||  |||||||| ||||||||||||    
T  29286645 ccgacgtcgctatcgtcgcgaataagccaa 29286674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 450 - 771
Target Start/End: Original strand, 23959034 - 23959362
Alignment:
Q  450 ttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaatt 549  Q
    |||||||||||||| |||||||||||||||| |||||||| |||| ||||| |||||| | || |||||||||||| | ||||||  || ||||||||||    
T  23959034 ttttacctgtaattaaaccagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataaacaagtaaaatacaatattttttacaatt 23959133  T
Q  550 gactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaatattaaagagtgcttgaaattaaacaacacattacat 649  Q
    |    |||||||||||| || ||||||  || ||| ||||| || ||||||||||||||||||| ||| | ||||     |||||||||||||||||||     
T  23959134 gttcataattaaatcaaaccgacatttggttcaaaatacacaaaagtttgaaattcatcaaaatgttacatagtgtccataattaaacaacacattacac 23959233  T
Q  650 atcattacataaaatatctatcgacattctacgcacatgcagatggaacgaacata-----aagatatattatcttcaaccatattctgaaacataaatc 744  Q
    ||||||| || ||||  |||   |||||| |||||  |||| || |||||||||||     |  ||||||||||||  ||||||||| ||||||||||||    
T  23959234 atcattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatatataatatattatcttacaccatattccgaaacataaatc 23959333  T
Q  745 ctacgt--ctatcgtcacgaataagccaa 771  Q
    | ||||  ||||||||  |||||||||||    
T  23959334 caacgtcgctatcgtcgtgaataagccaa 23959362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 449 - 617
Target Start/End: Original strand, 7537329 - 7537497
Alignment:
Q  449 tttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaat 548  Q
    ||||||||||||||| |||||||||||||||| |||||||| || ||||||| |||| | | ||||||||||||||||| ||||||  ||||||||||||    
T  7537329 tttttacctgtaattaaaccagagcatttccaaaggcaatataaatcatacaacattgaaactcggtcataaacaagaaaaatacaatatcttttacaat 7537428  T
Q  549 tgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaatatta 617  Q
    || |  |||||||||||| || ||||||  |||||||||||| || |||||||||||||| ||| ||||    
T  7537429 tgtccataattaaatcaaaccgacatttggttaaaattacacaaacgtttgaaattcatctaaacatta 7537497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 427 - 771
Target Start/End: Complemental strand, 25141059 - 25140706
Alignment:
Q  427 ttttcaagccattttttg-cctatttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaag 525  Q
    |||||||||||||||| | || | |||||||||||||| ||||||| |||||||| |||||||| || |||||||  ||| | | |||| ||||||||||    
T  25141059 ttttcaagccatttttcggccaagttttacctgtaattaaaccagaacatttccaaaggcaatataaatcatacaatattgaaactcggccataaacaag 25140960  T
Q  526 aacaatacataatcttttacaattgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaatattaaagagtgc 625  Q
    || ||||||  ||| |||||||||| |  |||||||||||| || ||||||  || |||||| || || |||||||||||||||| |  ||| | ||||     
T  25140959 aaaaatacaatatcatttacaattgtccataattaaatcaaaccgacatttggttcaaattaaacaaacgtttgaaattcatcaacacgttacaaagtgt 25140860  T
Q  626 ttgaaattaaacaacacattacatatcattacataaaatatctatcgacattctacgcacatgcagatggaacgaacata------aagatatattatct 719  Q
        ||||||||||| ||||||| ||||||| || ||||  |||   |||||| |||||  |||| ||||||||||||||      |  |||||||||||    
T  25140859 ccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacattatataatatattatct 25140760  T
Q  720 tcaaccatattctgaaacataaatcctacgt--ctatcgtcacgaataagccaa 771  Q
    |  ||||||||| ||||||||||| | ||||  |||||||||||||||||||||    
T  25140759 ttcaccatattccgaaacataaatgcgacgtcgctatcgtcacgaataagccaa 25140706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 431 - 771
Target Start/End: Complemental strand, 31151014 - 31150666
Alignment:
Q  431 caagccattttttgccta-tttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaaca 529  Q
    |||||||||||| ||| | ||||||||| ||||| | |||||||||||||| |||||| | || ||||||| |||| | | |||| ||||||||||   |    
T  31151014 caagccatttttcgcccagtttttacctataattaatccagagcatttccaaaggcaaaataattcatacaacattgaaactcggacataaacaaggtaa 31150915  T
Q  530 atacataatcttttacaattgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaatattaaagagtgcttga 629  Q
    |||||  |||||||||||||| |  |||||||||||| || ||||||  ||  |||||||| || ||||||||||||||||||  ||| | ||||         
T  31150914 atacaatatcttttacaattgtccataattaaatcaaaccgacatttggttccaattacacaaacgtttgaaattcatcaaaacgttacaaagtgtccat 31150815  T
Q  630 aattaaacaacacattacatatcattacataaaatatctatcgacattctacgcacatgcagatggaacgaacata-----aagatatattatcttcaac 724  Q
    ||||||||||| ||||||| ||||||| || ||||  |||   |||||| |||||  |||| || || | ||||||     |  ||||||||||||| ||    
T  31150814 aattaaacaactcattacacatcattaaattaaatccctacatacattcaacgcaattgcatatcgatcaaacatacatatataatatattatcttccac 31150715  T
Q  725 catattctgaaacataaatcctacgt--ctatcgtcacgaataagccaa 771  Q
    |||||||| |||||||||||| ||||  |||||||| ||||||||||||    
T  31150714 catattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaa 31150666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 449 - 612
Target Start/End: Complemental strand, 18610163 - 18610000
Alignment:
Q  449 tttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaat 548  Q
    ||||||| ||||||| ||||||||||||| || |||||||| || ||||||| |||| | | ||||||||||||||||| ||||||  ||||||||||||    
T  18610163 tttttacatgtaattaaaccagagcattttcaaaggcaatataaatcatacaacattgaaactcggtcataaacaagaaaaatacaatatcttttacaat 18610064  T
Q  549 tgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaa 612  Q
    || |  |||||||||||| || |||| |  ||  |||||||| || ||||||||||||||||||    
T  18610063 tgtccataattaaatcaaaccgacatctggttcgaattacacaaacgtttgaaattcatcaaaa 18610000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 449 - 658
Target Start/End: Complemental strand, 29667763 - 29667554
Alignment:
Q  449 tttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaat 548  Q
    |||||| |||||||| ||||||||||||| || |||||||| |||| ||||| | |||| | || |||||||||||| | ||||||  ||||||||||||    
T  29667763 tttttatctgtaatttaaccagagcattttcaaaggcaatataacttatacaacttttaaactcagtcataaacaagtaaaatacaatatcttttacaat 29667664  T
Q  549 tgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaatattaaagagtgcttgaaattaaacaacacattaca 648  Q
    || |  |||||||||||| || ||||||  || ||| ||||| || ||||||||||||||||||  ||| | ||||     |||||||||||||||||||    
T  29667663 tgtccataattaaatcaaaccgacatttggttcaaaatacacaaaagtttgaaattcatcaaaacgttacacagtgtccataattaaacaacacattaca 29667564  T
Q  649 tatcattaca 658  Q
      ||||||||    
T  29667563 actcattaca 29667554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 449 - 612
Target Start/End: Original strand, 2051170 - 2051333
Alignment:
Q  449 tttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaat 548  Q
    |||||| |||||||| || ||||||||||||| |||||||| || ||||||| |||| | | ||| |||||| |||||| ||||||  |||||||||| |    
T  2051170 tttttatctgtaattaaaacagagcatttccaaaggcaatataaatcatacaacattgaaactcgatcataaccaagaaaaatacaatatcttttacagt 2051269  T
Q  549 tgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaa 612  Q
    || |  |||||||||||| || ||||||  || ||||||||| || ||||||||||||||||||    
T  2051270 tgtccataattaaatcaaaccgacattttgttcaaattacacaaacgtttgaaattcatcaaaa 2051333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 449 - 576
Target Start/End: Original strand, 8304580 - 8304707
Alignment:
Q  449 tttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaat 548  Q
    ||||||| ||||||| |||||||||||||||| || ||||| | |||||||| ||||| || || |||||||||||||| ||||||| ||||||||||||    
T  8304580 tttttacatgtaattaaaccagagcatttccaaagccaatatacctcatacaacatttgcactcagtcataaacaagaaaaatacattatcttttacaat 8304679  T
Q  549 tgactgtaattaaatcaatccaacattt 576  Q
    || |  |||||||||||| || ||||||    
T  8304680 tgtccataattaaatcaaaccgacattt 8304707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 449 - 609
Target Start/End: Complemental strand, 3502594 - 3502434
Alignment:
Q  449 tttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaat 548  Q
    |||||||||||||||  ||||||||||||| | |||||| |||| ||||||| |||| | | | || |||||||||||  ||||||  ||||||||||||    
T  3502594 tttttacctgtaattacaccagagcatttcaaaaggcaaaacaattcatacaacattgaaacttggccataaacaagataaatacaatatcttttacaat 3502495  T
Q  549 tgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatca 609  Q
    || |  |||||||||||| || ||||||  || ||||||||| || |||||||||||||||    
T  3502494 tgtccataattaaatcaaaccgacatttggttcaaattacacaaacgtttgaaattcatca 3502434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 448 - 612
Target Start/End: Complemental strand, 26702642 - 26702479
Alignment:
Q  448 atttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaa 547  Q
    |||||||| ||||||| || ||||||||||||| ||||| || || ||||||| |||  | | ||||||||||||||||| ||||||  |||||||||||    
T  26702642 atttttacatgtaattaaatcagagcatttccaaaggcagtataaatcatacaacatagaaattcggtcataaacaagaaaaatacaatatcttttacaa 26702543  T
Q  548 ttgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaa 612  Q
    ||| |  ||||||||| || || ||||||  || ||||||||| || ||||||||||||||||||    
T  26702542 ttgtccataattaaat-aaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaa 26702479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 449 - 607
Target Start/End: Complemental strand, 11840180 - 11840022
Alignment:
Q  449 tttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaat 548  Q
    ||||||||||||||| ||||||| |||||||| |||||| | || ||||||| |||| | | |||  |||||||||||  ||||||  ||||||||||||    
T  11840180 tttttacctgtaattaaaccagaacatttccaaaggcaaaataattcatacaacattgaaactcgaacataaacaagataaatacaatatcttttacaat 11840081  T
Q  549 tgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcat 607  Q
    ||    |||||||||||| || |||||| ||| ||||||||| || |||||||||||||    
T  11840080 tgttcataattaaatcaaaccgacatttgattcaaattacacaaacgtttgaaattcat 11840022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 450 - 550
Target Start/End: Original strand, 2258429 - 2258529
Alignment:
Q  450 ttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaatt 549  Q
    |||||| ||||||| ||||||||||||| || |||||||| |||||||||| |||||| | || |||||||||||||| ||||||  |||||||||||||    
T  2258429 ttttacttgtaattaaaccagagcattttcaaaggcaatataactcatacaacatttaaactcagtcataaacaagaaaaatacaatatcttttacaatt 2258528  T
Q  550 g 550  Q
    |    
T  2258529 g 2258529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 449 - 612
Target Start/End: Complemental strand, 28362661 - 28362498
Alignment:
Q  449 tttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaat 548  Q
    ||||||||||||||| |||||||||||||||| ||| |||| || ||||| | |||| | | ||||||||||||||||| ||||||  |||||||||| |    
T  28362661 tttttacctgtaattaaaccagagcatttccaaaggtaatataaatcatataacattgaaactcggtcataaacaagaaaaatacaatatcttttacagt 28362562  T
Q  549 tgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaa 612  Q
    || ||  |||||||| || || ||||||  || ||||||||| |  | |||||||||| |||||    
T  28362561 tgtctaaaattaaattaaaccgacatttggttcaaattacacaaccgattgaaattcaacaaaa 28362498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 673 - 780
Target Start/End: Original strand, 7537567 - 7537681
Alignment:
Q  673 acattctacgcacatgcagatggaacgaacata-----aagatatattatcttcaaccatattctgaaacataaatcctacgt--ctatcgtcacgaata 765  Q
    |||||| ||||| ||||| ||||||||||||||     |  ||||||||||||| ||||||||| ||||||||||||| ||||  |||||||| ||||||    
T  7537567 acattcaacgcaaatgcatatggaacgaacatacatatataatatattatcttccaccatattccgaaacataaatccgacgtcgctatcgtcgcgaata 7537666  T
Q  766 agccaatgcttataa 780  Q
    |||||| || |||||    
T  7537667 agccaaggcatataa 7537681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 449 - 611
Target Start/End: Original strand, 13382770 - 13382932
Alignment:
Q  449 tttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaat 548  Q
    ||||||||||||||| |||||||||||||||| |||||| | || |||||||   || | | |||| |||||  ||||  | ||||  ||||||||||||    
T  13382770 tttttacctgtaattaaaccagagcatttccaaaggcaaaataattcatacaagtttgaaactcggacataataaagataactacaatatcttttacaat 13382869  T
Q  549 tgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaa 611  Q
    ||    ||||||||| || || ||||||  ||||||||| || || |||||||||||||||||    
T  13382870 tgttcataattaaattaaaccgacatttggttaaaattaaacaaacgtttgaaattcatcaaa 13382932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 431 - 609
Target Start/End: Complemental strand, 31771690 - 31771510
Alignment:
Q  431 caagccatttttt--gcctatttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaac 528  Q
    |||||||||||||  |||  ||||||||| ||||| ||  ||| |||||| | |||||| | || ||||||| |||| | | |||| ||||||||||||     
T  31771690 caagccattttttcagccattttttacctttaattaaagtagatcatttcgaaaggcaaaataattcatacaacattgaaactcggacataaacaagaaa 31771591  T
Q  529 aatacataatcttttacaattgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatca 609  Q
    ||||||  || |||||||||||    ||||||||| || || ||||||  || ||||||||| || |||||||||||||||    
T  31771590 aatacaatattttttacaattgttcataattaaattaaaccgacatttggttcaaattacacaaacgtttgaaattcatca 31771510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 630 - 771
Target Start/End: Original strand, 2051365 - 2051513
Alignment:
Q  630 aattaaacaacacattacatatcattacataaaatatctatcgacattctacgcacatgcagatggaacgaacata-----aagatatattatcttcaac 724  Q
    ||||||||||| ||||||| ||||||| || ||||  |||   |||||| |||||  |||| ||||||||||||||     |  ||||||||||||| ||    
T  2051365 aattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccac 2051464  T
Q  725 catattctgaaacataaatcctacgt--ctatcgtcacgaataagccaa 771  Q
    ||||||  ||||||||||||| ||||  | |||||| ||||||||||||    
T  2051465 catatttcgaaacataaatccgacgtcgccatcgtcgcgaataagccaa 2051513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 709 - 751
Target Start/End: Original strand, 13383049 - 13383091
Alignment:
Q  709 atatattatcttcaaccatattctgaaacataaatcctacgtc 751  Q
    ||||||||||||| ||||||||| ||||||||||||| |||||    
T  13383049 atatattatcttccaccatattccgaaacataaatccgacgtc 13383091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 115; Significance: 6e-58; HSPs: 23)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 115; E-Value: 6e-58
Query Start/End: Original strand, 428 - 713
Target Start/End: Original strand, 31598613 - 31598897
Alignment:
Q  428 tttcaagccattttttgcctattt-ttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaaga 526  Q
    |||||||||| |||| |||||||| |||| ||||||||||| | | || ||||||||||| |||||||||||||||| ||| |||| |||||||||||||    
T  31598613 tttcaagccaattttggcctatttattacatgtaattcaacaacatcaattccagaggcagtacaactcatacatcaattataatcagtcataaacaaga 31598712  T
Q  527 acaatacataatcttttacaattgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaatattaaagagtgct 626  Q
    |||||||||||||||| ||||||||    |||||||||||| | ||| ||| ||||||||||| |||||||||||||||| ||||| | |||||| || |    
T  31598713 acaatacataatctttcacaattgatcaaaattaaatcaattcgaca-ttcgttaaaattacatgaatgtttgaaattcaacaaaaca-taaagaatgtt 31598810  T
Q  627 tgaaattaaacaacacattacatatcattacataaaatatctatcgacattctacgcacatgcagatggaacgaacataaagatata 713  Q
    ||||||||| |||| ||||||||| ||||| || |||| ||||  |||||||||||||||||||| | |||||| || ||| |||||    
T  31598811 tgaaattaagcaactcattacataacattatatgaaatctctactgacattctacgcacatgcagttagaacgaccacaaatatata 31598897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 449 - 751
Target Start/End: Complemental strand, 10423337 - 10423031
Alignment:
Q  449 tttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaat 548  Q
    ||||||||||||||| ||||||||||||| || |||||||| || ||||||| |||| | | ||||||||||||||||| ||||||| ||||||||||||    
T  10423337 tttttacctgtaattaaaccagagcattttcaaaggcaatataaatcatacaacattgaaactcggtcataaacaagaaaaatacat-atcttttacaat 10423239  T
Q  549 tgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaatattaaagagtgcttgaaattaaacaacacattaca 648  Q
    || |  ||||||||| || || |||||   || ||||||||| || ||||||||||||||||||  ||| |  |||     ||||||||||| |||||||    
T  10423238 tgtccataattaaattaaaccgacattaggttcaaattacacaaacgtttgaaattcatcaaaacgttacaatgtgtccataattaaacaactcattaca 10423139  T
Q  649 tatcattacataaaatatctatcgacattctacgcacatgcagatggaacgaacata-----aagatatattatcttcaaccatattctgaaacataaat 743  Q
    |||||||| || ||||  |||   |||||| |||||  |||| ||||||||||||||     |  ||||||||||||| ||||||||| |||||||||||    
T  10423138 tatcattagattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattccgaaacataaat 10423039  T
Q  744 cctacgtc 751  Q
    || |||||    
T  10423038 ccgacgtc 10423031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 449 - 771
Target Start/End: Original strand, 6186789 - 6187130
Alignment:
Q  449 tttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcata--aacaagaacaatacataatcttttaca 546  Q
    ||||||||||||||||||||| |||||||||  ||||||||| | || |||| |||||| | || ||||||  |||||||| ||||||| |||||||| |    
T  6186789 tttttacctgtaattcaaccaaagcatttccgaaggcaatactagtcgtacaacatttatactcagtcatataaacaagaaaaatacattatcttttata 6186888  T
Q  547 attgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaatattaaagagtgcttgaaattaaacaacac---- 642  Q
     | | |  ||||||||||||||| ||||||| ||||||||||||| |||||||||||||||||||| ||||||| |||     |||||||||||||        
T  6186889 gtagtcaataattaaatcaatccgacatttcgttaaaattacacgtatgtttgaaattcatcaaaacattaaagggtgtccataattaaacaacacatta 6186988  T
Q  643 ------attacatatcattacataaaatatctatcgacattctacgcacatgcagatggaacgaacata-----aagatatattatcttcaaccatattc 731  Q
          |||||||||||||| || |||| ||||  |||||||||||||  |||| ||||||||||||||     |  ||||||||||||| ||||||||     
T  6186989 caacatattacatatcattaaattaaatctctactgacattctacgcatttgcatatggaacgaacatacatatataatatattatcttccaccatattg 6187088  T
Q  732 tgaaacataaatcctacgt--ctatcgtcacgaataagccaa 771  Q
      |||||||||||| | ||  ||||||||  |||||||||||    
T  6187089 ctaaacataaatccaatgtcgctatcgtcgtgaataagccaa 6187130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 431 - 658
Target Start/End: Original strand, 18578746 - 18578974
Alignment:
Q  431 caagccattttttgccta-tttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaaca 529  Q
    |||||||||||| | ||| ||||||| |||||||||||||||| ||||||| |||||||| |||| ||||| |||||| | ||  ||||||||||| | |    
T  18578746 caagccatttttcggctagtttttacttgtaattcaaccagagtatttccaaaggcaatataacttatacaacatttaaactcactcataaacaagtaaa 18578845  T
Q  530 atacataatcttttacaattgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaatattaaagagtgcttga 629  Q
    |||||  |||||||||||||| |  |||||||||||| || |||||| ||| ||| ||||| || ||||||||||||||||||| ||| | ||||         
T  18578846 atacaatatcttttacaattgtccataattaaatcaaaccgacatttgattcaaaatacacaaaagtttgaaattcatcaaaatgttacatagtgtccat 18578945  T
Q  630 aattaaacaacacattacatatcattaca 658  Q
    |||||||||||||||||||  ||||||||    
T  18578946 aattaaacaacacattacaactcattaca 18578974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 449 - 612
Target Start/End: Complemental strand, 44051023 - 44050860
Alignment:
Q  449 tttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaat 548  Q
    ||||||| ||||||| |||||||||||||||| |||||||| || ||||||| |||| | | ||||||||||||||||| ||||||  ||||||||||||    
T  44051023 tttttacttgtaattaaaccagagcatttccaaaggcaatataaatcatacaacattgaaactcggtcataaacaagaaaaatacaatatcttttacaat 44050924  T
Q  549 tgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaa 612  Q
    || |  |||||||||||| || ||||||  || ||||||||| || ||||||||||||||||||    
T  44050923 tgtccataattaaatcaaaccgacatttggttcaaattacacaaacgtttgaaattcatcaaaa 44050860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 449 - 613
Target Start/End: Original strand, 38460568 - 38460732
Alignment:
Q  449 tttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaat 548  Q
    ||||||||||||||| ||||||||||||| || |||||||| || ||||||| |||| | | ||||||||||||||||| |||| |  ||||||||||||    
T  38460568 tttttacctgtaattaaaccagagcattttcaaaggcaatataaatcatacaacattgaaactcggtcataaacaagaaaaatataatatcttttacaat 38460667  T
Q  549 tgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaat 613  Q
    || |  ||||||||| || || |||||| ||| ||||||||| || |||||||||||||||||||    
T  38460668 tgtccataattaaattaaaccgacatttgattcaaattacacaaaagtttgaaattcatcaaaat 38460732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 427 - 612
Target Start/End: Complemental strand, 37395171 - 37394984
Alignment:
Q  427 ttttcaagccatttttt--gcctatttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaa 524  Q
    |||||||||||||||||  |||  ||||||||||||||| |||||||||||||||| ||| || | || ||||||| |||| | | |||| |||||||||    
T  37395171 ttttcaagccattttttcggccagtttttacctgtaattaaaccagagcatttccaaaggaaaaataattcatacaacattgaaactcggacataaacaa 37395072  T
Q  525 gaacaatacataatcttttacaattgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaa 612  Q
    ||  ||||||  |||||||||||||| |  ||||||||| || || |||||| ||| ||||||||| || ||||||||||||||||||    
T  37395071 gataaatacaatatcttttacaattgtccataattaaattaaaccgacatttgattcaaattacacaaacgtttgaaattcatcaaaa 37394984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 449 - 625
Target Start/End: Complemental strand, 30043362 - 30043186
Alignment:
Q  449 tttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaat 548  Q
    ||||||| || ||||||||||||||||||| ||||||||||| | || |||| |||||| | |  |||||||||||||| |||  || ||||||||||||    
T  30043362 tttttacatgaaattcaaccagagcatttcaagaggcaatactattcgtacaacatttatactaagtcataaacaagaaaaatgtattatcttttacaat 30043263  T
Q  549 tgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaatattaaagagtgc 625  Q
    |  |  ||||||||||||||| || |    ||||||||||||| |||||||||||| ||||||| ||||||||||||    
T  30043262 tatccataattaaatcaatccgacgtagagttaaaattacacggatgtttgaaatttatcaaaacattaaagagtgc 30043186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 431 - 612
Target Start/End: Complemental strand, 50905112 - 50904930
Alignment:
Q  431 caagccattttttg-cctatttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaaca 529  Q
    |||||||||||| | || |||||||||||||||| |||||||||||||| | | |||||| || ||||||| |||| | | |||  |||||||||||| |    
T  50905112 caagccatttttcggccaatttttacctgtaattaaaccagagcatttctaaatgcaatataaatcatacaacattgaaactcgaacataaacaagaaaa 50905013  T
Q  530 atacataatcttttacaattgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaa 612  Q
    |||   ||||||||||||||| |  |||||||||||| || ||||||  || ||||||||| || ||||||||||||||||||    
T  50905012 atatgaaatcttttacaattgtccataattaaatcaaaccgacattttgttcaaattacacaaacgtttgaaattcatcaaaa 50904930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 431 - 751
Target Start/End: Complemental strand, 3408190 - 3407862
Alignment:
Q  431 caagccatttttt--gcctatttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaac 528  Q
    |||||||||||||  |||  ||||||| ||||||| |||||||||||||||| |||||| | || |||||||  ||| | | |||||||||| |||||      
T  3408190 caagccattttttcggccagtttttacttgtaattaaaccagagcatttccaaaggcaaaataattcatacaagattgaaactcggtcataatcaagata 3408091  T
Q  529 aatacataatcttttacaattgactgtaattaaatcaatccaaca-tttcattaaaattacacgaatgtttgaaattcatcaaaatattaaagagtgctt 627  Q
    ||||||  ||||||||||||||    ||||||||| || || ||| |||  ||||||||| || || |||||||||||||||||| |||| | ||||       
T  3408090 aatacaatatcttttacaattgttcataattaaattaaaccgacattttggttaaaattaaacaaacgtttgaaattcatcaaaacattacaaagtgtcc 3407991  T
Q  628 gaaattaaacaacacattacatatcattacataaaatatctatcgacattctacgcacatgcagatggaacgaacata-----aagatatattatcttca 722  Q
      |||||||| || ||||||| ||||||| || ||||  |||   |||||| |||||  |||| ||||||||||||||     |  |||||||||||||     
T  3407990 ataattaaactactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttcc 3407891  T
Q  723 accatattctgaaacataaatcctacgtc 751  Q
    ||||||||| ||||||||||||| |||||    
T  3407890 accatattccgaaacataaatccgacgtc 3407862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 449 - 609
Target Start/End: Original strand, 37016041 - 37016201
Alignment:
Q  449 tttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaat 548  Q
    ||||||||||||||| |||||||||||||| | |||||| |||| |||||||||||| | | |||| |||||||||||  ||||||  ||||||||||||    
T  37016041 tttttacctgtaattaaaccagagcatttcgaaaggcaaaacaattcatacatcattgaaactcggacataaacaagataaatacaatatcttttacaat 37016140  T
Q  549 tgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatca 609  Q
    || |  |||||||||||| |  || ||| ||| ||||||||  || |||||||||||||||    
T  37016141 tgtccataattaaatcaaactgacgtttgattcaaattacagaaacgtttgaaattcatca 37016201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 465 - 612
Target Start/End: Original strand, 51642165 - 51642312
Alignment:
Q  465 aaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaattgactgtaattaaatc 564  Q
    ||||||||||||| || |||||||| || |||||||  ||| | | ||| ||||||||||||| ||||||  |||||||||||||| |  ||||||||||    
T  51642165 aaccagagcattttcaaaggcaatataaatcatacaatattgaaactcgatcataaacaagaaaaatacaatatcttttacaattgtccataattaaatc 51642264  T
Q  565 aatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaa 612  Q
    || || ||||||  || ||||||||| || ||||||||||||||||||    
T  51642265 aaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaa 51642312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 431 - 607
Target Start/End: Complemental strand, 4774563 - 4774386
Alignment:
Q  431 caagccattttttgccta-tttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaaca 529  Q
    |||||||||||| | ||| ||||||||||||||| |||||||||||||||| || ||||| |||| ||||| |||||| | || ||||||| |||| | |    
T  4774563 caagccatttttcgactagtttttacctgtaatttaaccagagcatttccaaagccaatataacttatacaacatttaaactcagtcataagcaagtaaa 4774464  T
Q  530 atacataatcttttacaattgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcat 607  Q
    |||||  ||| |||||||||| |  ||||||||||||  | ||||||  || ||| ||||| || |||||||||||||    
T  4774463 atacaatatcatttacaattgtccataattaaatcaaatcgacatttggttcaaaatacacaaaagtttgaaattcat 4774386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 450 - 609
Target Start/End: Original strand, 51492215 - 51492374
Alignment:
Q  450 ttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaatt 549  Q
    |||||||||||||| |||||||||||||| | |||||| | || ||||||| |||| | | |||  |||||||||||  | ||||  |||||||||||||    
T  51492215 ttttacctgtaattaaaccagagcatttcgaaaggcaaaataattcatacaacattaaaactcgaacataaacaagataagtacaatatcttttacaatt 51492314  T
Q  550 gactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatca 609  Q
    | |  |||||||||||| || ||||||  || ||||||||| || |||||||||||||||    
T  51492315 gtccataattaaatcaaaccgacatttggttcaaattacacaaacgtttgaaattcatca 51492374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 431 - 614
Target Start/End: Original strand, 44674262 - 44674445
Alignment:
Q  431 caagccattttttgcctatttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaa 530  Q
    |||||| ||||||| | | |||| ||||||||| || ||||||||||| | |||||| |||| ||||||| |||| | | |||| |||||||||||  |     
T  44674262 caagcctttttttggccagttttccctgtaattaaatcagagcatttcgaaaggcaaaacaattcatacaacattgaaactcggacataaacaagataag 44674361  T
Q  531 tacataatcttttacaattgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaata 614  Q
    ||||  |||||||||||||| |  |||||||||||| || ||||||  || ||||||||| ||  ||| |||||||||| ||||    
T  44674362 tacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaacatttaaaattcatcataata 44674445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 511 - 771
Target Start/End: Original strand, 10374244 - 10374511
Alignment:
Q  511 tcggtcataaacaagaacaatacataatcttttacaattgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaa 610  Q
    |||||||||| |||||| ||||||  | |||||||| ||| |  ||||||||| || || ||||||  || ||||||||| || ||||||||||||||||    
T  10374244 tcggtcataaccaagaaaaatacaataccttttacagttgtccataattaaatgaaaccgacatttggttcaaattacacaaacgtttgaaattcatcaa 10374343  T
Q  611 aatattaaagagtgcttgaaattaaacaacacattacatatcattacataaaatatctatcgacattctacgcacatgcagatggaacgaacata----- 705  Q
    || |||| |  |||     ||||||||||| ||||||| ||||||| || ||||  |||   |||||| |||||  |||| ||||||||||||||         
T  10374344 aacattacaaggtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatat 10374443  T
Q  706 aagatatattatcttcaaccatattctgaaacataaatcctacgt--ctatcgtcacgaataagccaa 771  Q
    |  ||||||||||||| ||||||||  ||||||||||||  | ||  |||||||| ||||||||||||    
T  10374444 ataatatattatcttccaccatatttcgaaacataaatctgatgtcgctatcgtcgcgaataagccaa 10374511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 449 - 609
Target Start/End: Complemental strand, 50278753 - 50278593
Alignment:
Q  449 tttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaat 548  Q
    ||||||||||||||| || ||||||||||| | |||||| | ||   ||||| |||| | | |||| |||||||||||| ||||||  ||||||||||||    
T  50278753 tttttacctgtaattaaaacagagcatttcgaaaggcaaaataatctatacaacattgaaactcggacataaacaagaaaaatacaatatcttttacaat 50278654  T
Q  549 tgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatca 609  Q
    |     |||||||||||| || ||||||  || ||||||||| || |||||||||||||||    
T  50278653 tattcataattaaatcaaaccgacatttggttgaaattacacaaacgtttgaaattcatca 50278593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 431 - 611
Target Start/End: Original strand, 15995844 - 15996026
Alignment:
Q  431 caagccatttttt--gcctatttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaac 528  Q
    |||||||||||||  |||  ||||||||||||||| |||||||||||||||| |||||| | || |||||||  ||| | | |||| |||||  ||||      
T  15995844 caagccattttttcggccagtttttacctgtaattaaaccagagcatttccaaaggcaaaataattcatacaagattgaaagtcggacataatgaagata 15995943  T
Q  529 aatacataatcttttacaattgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaa 611  Q
    | ||||  ||||||||||||||    ||||||||| || || ||||||  ||||||||| || || |||||||||||||||||    
T  15995944 agtacaatatcttttacaattgttcataattaaattaaaccgacatttggttaaaattaaacaaacgtttgaaattcatcaaa 15996026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 630 - 771
Target Start/End: Complemental strand, 37394952 - 37394804
Alignment:
Q  630 aattaaacaacacattacatatcattacataaaatatctatcgacattctacgcacatgcagatggaacgaacata-----aagatatattatcttcaac 724  Q
    ||||||||||| ||||||| ||||||| || ||||  |||   |||||| |||||  |||| ||||||||||||||     |  ||||||||||||| ||    
T  37394952 aattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccac 37394853  T
Q  725 catattctgaaacataaatcctacgt--ctatcgtcacgaataagccaa 771  Q
    ||||||| ||||||||||||  ||||  |||||||| ||||||||||||    
T  37394852 catattccgaaacataaatctgacgtcgctatcgtcgcgaataagccaa 37394804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 709 - 771
Target Start/End: Complemental strand, 44050744 - 44050680
Alignment:
Q  709 atatattatcttcaaccatattctgaaacataaatcctacgt--ctatcgtcacgaataagccaa 771  Q
    ||||||||||||| ||||||||| ||||||||||||| ||||  |||||||| ||||||||||||    
T  44050744 atatattatcttccaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaa 44050680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 431 - 751
Target Start/End: Original strand, 49563963 - 49564292
Alignment:
Q  431 caagccatttttt--gcctatttttacctgtaattcaaccagagcatttccagaggcaatacaactcata--catcatttacaatcggtcataaacaaga 526  Q
    |||||||||||||  |||  ||||||||||||||| |||||||||||||||| ||| |||| || |||||   || ||| | | |||| |||||  ||||    
T  49563963 caagccattttttcggccagtttttacctgtaattaaaccagagcatttccaaaggtaatataattcatatgtatgattgaaactcggacataatgaaga 49564062  T
Q  527 acaatacataatcttttacaattgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaatattaaagagtgct 626  Q
      ||||||  || |||||||||||    ||||||||| || || ||||||  ||||||||| ||  | |||||||||||||||||| |||| | ||||      
T  49564063 taaatacaatatattttacaattgttcataattaaattaaaccgacatttggttaaaattaaacagacgtttgaaattcatcaaaacattacaaagtgtc 49564162  T
Q  627 tgaaattaaacaacacattacatatcattacataaaatatctatcgacattctacgcacatgcagatggaacgaacata-----aagatatattatcttc 721  Q
       |||||||| || ||||||| ||||||| || ||||  |||   |||||| | |||  | || ||||||||||||||     |  ||||||| |||||    
T  49564163 cataattaaactactcattacacatcattaaattaaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatattgtcttc 49564262  T
Q  722 aaccatattctgaaacataaatcctacgtc 751  Q
     ||||||||| ||||||||||||| |||||    
T  49564263 caccatattccgaaacataaatccgacgtc 49564292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 636 - 751
Target Start/End: Complemental strand, 30043166 - 30043046
Alignment:
Q  636 acaacacattacatatcattacataaaatatctatcgacattctacgcacatgcagatggaacgaacataaagatata-----ttatcttcaaccatatt 730  Q
    ||||||||||||||||| ||| || |||| |||   ||||||||| | |  |||| |||||||||| ||| | |||||     |||||||| ||||||||    
T  30043166 acaacacattacatatcgttaaatgaaatctctggtgacattctatgaagttgcaaatggaacgaaaatacaaatataatatattatcttccaccatatt 30043067  T
Q  731 ctgaaacataaatcctacgtc 751  Q
    ||||||||||||||| |||||    
T  30043066 ctgaaacataaatccgacgtc 30043046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 709 - 751
Target Start/End: Original strand, 38460833 - 38460875
Alignment:
Q  709 atatattatcttcaaccatattctgaaacataaatcctacgtc 751  Q
    ||||||||| ||| ||||||||||||||||||||||| |||||    
T  38460833 atatattattttccaccatattctgaaacataaatccaacgtc 38460875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 106; Significance: 1e-52; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 449 - 698
Target Start/End: Original strand, 6267617 - 6267866
Alignment:
Q  449 tttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaat 548  Q
    ||||||||| ||||||| |||||||||||||| ||||||||| | || |||| ||||||   || |||||||||||||| ||||||| |||||||||  |    
T  6267617 tttttacctataattcagccagagcatttccaaaggcaatactagtcgtacaacatttatcctcagtcataaacaagaaaaatacattatcttttaccgt 6267716  T
Q  549 tgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaatattaaagagtgcttgaaattaaacaacacattaca 648  Q
    |  |  ||||||||||||||| |||||||||||||||| || ||||||||||||||||||| || |||||||||||     |||||||||||||||||||    
T  6267717 tatccataattaaatcaatccgacatttcattaaaattgcaagaatgtttgaaattcatcataacattaaagagtgtccataattaaacaacacattaca 6267816  T
Q  649 tatcattacataaaatatctatcgacattctacgcacatgcagatggaac 698  Q
    |||||||| || |||| ||||  |||||||||||||  ||||||||||||    
T  6267817 tatcattaaattaaatctctactgacattctacgcagttgcagatggaac 6267866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 449 - 648
Target Start/End: Complemental strand, 43179830 - 43179631
Alignment:
Q  449 tttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaat 548  Q
    ||||||||||||||||||||||||||||| || ||||||||| | || |||| |||||| | ||||||| ||||||||| |||| || |||||||||| |    
T  43179830 tttttacctgtaattcaaccagagcattttcaaaggcaatactagtcgtacaacatttatactcggtcaaaaacaagaaaaatatattatcttttacact 43179731  T
Q  549 tgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaatattaaagagtgcttgaaattaaacaacacattaca 648  Q
    || |  |||||||  |||||||||||||| ||||||||||||||||||||||||||||||||||  ||||||||||     |||||||||||||||||||    
T  43179730 tgtccataattaatacaatccaacatttcgttaaaattacacgaatgtttgaaattcatcaaaacgttaaagagtgtccataattaaacaacacattaca 43179631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 449 - 771
Target Start/End: Original strand, 7796720 - 7797049
Alignment:
Q  449 tttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaat 548  Q
    ||||||||||||||| |||||||||||||||| |||||||| || ||||||| |||| | | ||||| ||||||||||| ||||||  |||||||| |||    
T  7796720 tttttacctgtaattaaaccagagcatttccaaaggcaatataaatcatacaacattgaaactcggttataaacaagaaaaatacaatatcttttataat 7796819  T
Q  549 tgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaatattaaagagtgcttgaaattaaacaacacattaca 648  Q
    || |  |||||||||||| || ||||||  || ||||||||| || ||||||||||||||||||  ||| | ||||     ||||||||||| |||||||    
T  7796820 tgtccataattaaatcaaaccgacatttggttcaaattacacaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaaacaactcattaca 7796919  T
Q  649 tatcattacataaaatatctatcgacattctacgcacatgcagatggaacgaacata-----aagatatattatcttcaaccatattctgaaacataaat 743  Q
     ||||||| || ||||  |||   |||||| |||||  |||| ||||||||||||||     |  ||||||||||||| ||||||||| |||||||||||    
T  7796920 catcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattccgaaacataaat 7797019  T
Q  744 cctacgt--ctatcgtcacgaataagccaa 771  Q
    || ||||  |||||||| ||||||||||||    
T  7797020 ccgacgtcgctatcgtcgcgaataagccaa 7797049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 482 - 603
Target Start/End: Complemental strand, 16440313 - 16440192
Alignment:
Q  482 aggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaattgactgtaattaaatcaatccaacatttcatta 581  Q
    ||||||||||||||||||| |||||| |||| ||||||||||||||||||||||||| ||||| |||||||  ||||||||||||||| | ||||| |||    
T  16440313 aggcaatacaactcatacaccatttataatcagtcataaacaagaacaatacataatattttagaattgaccataattaaatcaatccgatatttcgtta 16440214  T
Q  582 aaattacacgaatgtttgaaat 603  Q
    ||||||||||||||||| ||||    
T  16440213 aaattacacgaatgtttaaaat 16440192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 431 - 751
Target Start/End: Original strand, 25890117 - 25890444
Alignment:
Q  431 caagccatttttt--gcctatttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaac 528  Q
    |||||||||||||  |||  ||||||||||||||| |||||||||||||||| |||||| | || |||||||  ||| | | |||| |||||||||||      
T  25890117 caagccattttttcggccagtttttacctgtaattaaaccagagcatttccaaaggcaaaataattcatacaagattgaaactcggacataaacaagata 25890216  T
Q  529 aatacataatcttttacaattgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaatattaaagagtgcttg 628  Q
    ||||||  ||||| ||||||||    ||||||||| || || ||||||  ||||||||| || || |||||||||||||||||| |||| | |||| |      
T  25890217 aatacaatatcttatacaattgttcataattaaattaaaccgacatttggttaaaattaaacaaacgtttgaaattcatcaaaacattacaaagtgttca 25890316  T
Q  629 aaattaaacaacacattacatatcattacataaaatatctatcgacattctacgcacatgcagatggaacgaacata-----aagatatattatcttcaa 723  Q
     ||||||||||| ||||||| ||||||| || ||||  |||   |||||| |||||  |||| ||||||||||||||     |  ||||||||| ||| |    
T  25890317 taattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattattttcca 25890416  T
Q  724 ccatattctgaaacataaatcctacgtc 751  Q
    |||||||||||||||||||||| |||||    
T  25890417 ccatattctgaaacataaatccgacgtc 25890444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 427 - 612
Target Start/End: Original strand, 24053273 - 24053459
Alignment:
Q  427 ttttcaagccattttttgccta-tttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaag 525  Q
    |||||||||||||||| | | | ||||||||||||||| ||||||||||||| || |||||||| |||| ||||| |||||| | || ||||||||||||    
T  24053273 ttttcaagccatttttcggccagtttttacctgtaatttaaccagagcattttcaaaggcaatataacttatacaacatttaaactcagtcataaacaag 24053372  T
Q  526 aacaatacataatcttttacaattgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaa 612  Q
     | ||||||  |||||||||||||| |  |||||| ||||| || ||||||  || ||| ||||| || ||||||||||||||||||    
T  24053373 taaaatacaatatcttttacaattgtccataattacatcaaaccgacatttggttcaaaatacacaaaagtttgaaattcatcaaaa 24053459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 449 - 771
Target Start/End: Complemental strand, 33995079 - 33994750
Alignment:
Q  449 tttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaat 548  Q
    ||||||| ||||||| ||||||| |||||||| |||||||| |||| ||||| |||||| | || |||||||||||| | ||||||  ||||||||||||    
T  33995079 tttttacatgtaatttaaccagaacatttccaaaggcaatataacttatacaacatttaaactcagtcataaacaagtaaaatacaatatcttttacaat 33994980  T
Q  549 tgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaatattaaagagtg--cttgaaattaaacaacacatta 646  Q
    || |  |||||||||||| || ||||||  || ||| ||||  || ||||||||||| |||||   ||| | ||||  | || |  ||||||||||||||    
T  33994979 tgtccataattaaatcaaaccgacatttggttcaaaatacaaaaaagtttgaaattcttcaaatcgttacatagtgtccatgca--taaacaacacatta 33994882  T
Q  647 catatcattacataaaatatctatcgacattctacgcacatgcagatggaacgaacata-----aagatatattatcttcaaccatattctgaaacataa 741  Q
    || ||||||| || ||||  |||   |||||| |||||  |||| ||||||||||||||     |  ||||||||||||| ||||||||  |||||||||    
T  33994881 cacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattaagaaacataa 33994782  T
Q  742 atcctacgt--ctatcgtcacgaataagccaa 771  Q
    |||| ||||  |||||||| ||||||||||||    
T  33994781 atccgacgtcgctatcgtcgcgaataagccaa 33994750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 431 - 745
Target Start/End: Complemental strand, 34080081 - 34079760
Alignment:
Q  431 caagccatttttt--gcctatttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaac 528  Q
    |||||||||||||  |||  ||||||||||||||| |||||||||||||||| |||||| | || |||||||  ||| | | |||| ||||| |||||      
T  34080081 caagccattttttcggccagtttttacctgtaattaaaccagagcatttccaaaggcaaaataattcatacaagattgaaactcggacataatcaagata 34079982  T
Q  529 aatacataatcttttacaattgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaatattaaagagtgcttg 628  Q
    | ||||  ||||||||||||||    ||||||||| || || ||||||  ||||||||| || || |||||||||||||||||| |||| | ||||        
T  34079981 agtacaatatcttttacaattgttcataattaaattaaaccgacatttggttaaaattaaacaaacgtttgaaattcatcaaaacattacaaagtgtcca 34079882  T
Q  629 aaattaaacaacacattacatatcattacataaaatatctatcgacattctacgcacatgcagatggaacgaacata-----aagatatattatcttcaa 723  Q
     ||||||||||| ||||||| ||||||| || ||||   ||   |||||| |||||  |||| ||||||||||||||     |  ||||||||||||| |    
T  34079881 taattaaacaactcattacacatcattaaattaaatccttacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttcca 34079782  T
Q  724 ccatattctgaaacataaatcc 745  Q
    ||||||||||||||||||||||    
T  34079781 ccatattctgaaacataaatcc 34079760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 427 - 612
Target Start/End: Original strand, 34122643 - 34122830
Alignment:
Q  427 ttttcaagccatttttt--gcctatttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaa 524  Q
    |||||||||||||||||  |||  ||||||||||||||| ||||||||||||| || |||||| | || ||||||| |||| | | |||| |||||||||    
T  34122643 ttttcaagccattttttcggccagtttttacctgtaattaaaccagagcattttcaaaggcaaaataattcatacaacattgaaactcggacataaacaa 34122742  T
Q  525 gaacaatacataatcttttacaattgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaa 612  Q
    ||  ||||||  |||||||||||||| |  ||||||||| || || ||||||  || ||||||||| || ||||||||||||||||||    
T  34122743 gataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttcaaattacacaaacgtttgaaattcatcaaaa 34122830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 427 - 751
Target Start/End: Original strand, 27863522 - 27863853
Alignment:
Q  427 ttttcaagccatttttt--gcctatttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaa 524  Q
    |||||||||||||||||  |||  ||||||||||||||| ||||||| |||||||| |||||| | || ||| |||  ||| | | |||| ||||| |||    
T  27863522 ttttcaagccattttttcggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaataattcacacaagattgaaactcggacataatcaa 27863621  T
Q  525 gaacaatacataatcttttacaattgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaatattaaagagtg 624  Q
    ||  | ||||  ||||||||||||||    ||||||||| || || ||||||  ||||||||| || || |||||||||||||||||| |||| | ||||    
T  27863622 gataagtacaatatcttttacaattgttcataattaaattaaaccgacatttggttaaaattaaacaaacgtttgaaattcatcaaaacattacaaagtg 27863721  T
Q  625 cttgaaattaaacaacacattacatatcattacataaaatatctatcgacattctacgcacatgcagatggaacgaacata-----aagatatattatct 719  Q
         ||||||||||| ||||||| ||||||| || ||||  |||   |||||| |||||  |||| ||||||||||||||     |  |||||||||||    
T  27863722 tccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcaaatggaacgaacatacatatataatatattatct 27863821  T
Q  720 tcaaccatattctgaaacataaatcctacgtc 751  Q
    || |||||||||  |||||||||||| |||||    
T  27863822 tccaccatattccaaaacataaatccgacgtc 27863853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 449 - 612
Target Start/End: Original strand, 25877763 - 25877924
Alignment:
Q  449 tttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaat 548  Q
    ||||||||||||||| ||||||||||||| || | |||||| || ||||||| |||| | | | ||||||||||||||| ||||||  ||||||||||||    
T  25877763 tttttacctgtaattaaaccagagcattttcaaaagcaatataaatcatacaacattgaaacttggtcataaacaagaaaaatacaatatcttttacaat 25877862  T
Q  549 tgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaa 612  Q
    || |  |||||||||  | || ||||||  || ||||||||| || ||||||||||||||||||    
T  25877863 tgtccataattaaat--aaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaa 25877924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 449 - 751
Target Start/End: Original strand, 13563784 - 13564091
Alignment:
Q  449 tttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaat 548  Q
    ||||||||||||||| |||||||||||||||| |||||| | || |||||||  ||| | | |||| |||||  ||||  | ||||  ||||||||||||    
T  13563784 tttttacctgtaattaaaccagagcatttccaaaggcaaaataattcatacaagattgaaactcggacataatgaagataagtacaatatcttttacaat 13563883  T
Q  549 tgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaatattaaagagtgcttgaaattaaacaacacattaca 648  Q
    ||    ||||||||| || || ||||||  ||||||||| || || ||||||||||||| |||| |||| | ||||     ||||||||||| |||||||    
T  13563884 tgttcataattaaattaaaccgacatttggttaaaattaaacaaacgtttgaaattcattaaaacattacaaagtgtccataattaaacaactcattaca 13563983  T
Q  649 tatcattacataaaatatctatcgacattctacgcacatgcagatggaacgaacata-----aagatatattatcttcaaccatattctgaaacataaat 743  Q
     ||||||| || ||||  |||   |||||| |||||  |||| ||||| ||||||||     |  ||||||||||||| ||||||||| |||||||||||    
T  13563984 catcattaaattaaatccctacttacattcaacgcaattgcatatggatcgaacatacatatataatatattatcttccaccatattccgaaacataaat 13564083  T
Q  744 cctacgtc 751  Q
    || |||||    
T  13564084 ccgacgtc 13564091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 457 - 612
Target Start/End: Original strand, 24050177 - 24050332
Alignment:
Q  457 tgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaattgactgta 556  Q
    ||||||| |||||||||||| ||| ||| |||| |||| ||||| |||||| | || |||||||||||| | ||||||  |||||||||||||| |  ||    
T  24050177 tgtaatttaaccagagcattaccaaaggaaatataacttatacaacatttaaattcagtcataaacaagtaaaatacaatatcttttacaattgtccata 24050276  T
Q  557 attaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaa 612  Q
    |||||||||| || ||||||  || ||| ||||| || ||||||||||||||||||    
T  24050277 attaaatcaaaccgacatttggttcaaaatacacaaaagtttgaaattcatcaaaa 24050332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 431 - 751
Target Start/End: Original strand, 28882117 - 28882438
Alignment:
Q  431 caagccatttttt--gcctatttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaac 528  Q
    |||||||||||||  |||  ||||||||||||||| ||||||||||||| || ||||||       ||||||  ||| | | |||||||||| |||||      
T  28882117 caagccattttttcggccagtttttacctgtaattaaaccagagcatttacaaaggcaaa------catacaagattgaaactcggtcataatcaagata 28882210  T
Q  529 aatacataatcttttacaattgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaatattaaagagtgcttg 628  Q
    ||||||  ||||||||||||||    ||||||||| || || ||||||| ||||||||| || || |||||||||||||||||| |||| | ||||        
T  28882211 aatacaatatcttttacaattgttcataattaaattaaaccgacatttcgttaaaattaaacaaacgtttgaaattcatcaaaacattacaaagtgtcca 28882310  T
Q  629 aaattaaacaacacattacatatcattacataaaatatctatcgacattctacgcacatgcagatggaacgaacata-----aagatatattatcttcaa 723  Q
     |||||||| || ||||||| ||||||| || ||||  | |   |||||| |||||  |||| ||||||||||||||     |  ||||||||||||| |    
T  28882311 taattaaactactcattacacatcattaaattaaatccccacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttcca 28882410  T
Q  724 ccatattctgaaacataaatcctacgtc 751  Q
    |||||||| ||||||||||||| |||||    
T  28882411 ccatattccgaaacataaatccgacgtc 28882438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 449 - 617
Target Start/End: Complemental strand, 1039735 - 1039567
Alignment:
Q  449 tttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaat 548  Q
    ||||||||||||||| ||||||||||||| || |||||| | || |||||||  ||| | | |||| |||||||| ||  ||||||  ||||||||||||    
T  1039735 tttttacctgtaattaaaccagagcattttcaaaggcaaaataattcatacaagattgaaactcggacataaacacgataaatacaatatcttttacaat 1039636  T
Q  549 tgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaatatta 617  Q
    || |  ||||||||| || || ||||||  ||||||||| || || |||||||||||||||||| ||||    
T  1039635 tgtccataattaaattaaaccgacatttggttaaaattaaacaaacgtttgaaattcatcaaaacatta 1039567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 427 - 734
Target Start/End: Original strand, 7017630 - 7017944
Alignment:
Q  427 ttttcaagccatttttt--gcctatttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaa 524  Q
    |||||||||||||||||  |||  |||||| |||||||| |||||||||||||||| |||||| | || |||||||  ||| | | |||| |||||  ||    
T  7017630 ttttcaagccattttttcggccagtttttatctgtaattaaaccagagcatttccaaaggcaaaataattcatacaagattgaaactcggacataatgaa 7017729  T
Q  525 gaacaatacataatcttttacaattgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaatattaaagagtg 624  Q
    ||  | ||||  ||||||||||||||    ||||||||| || || ||||||  ||||||||| || || |||||||||||||||||| |||| | ||||    
T  7017730 gataagtacaatatcttttacaattgttcataattaaattaaaccgacatttggttaaaattaaacaaacgtttgaaattcatcaaaacattacaaagtg 7017829  T
Q  625 cttgaaattaaacaacacattacatatcattacataaaatatctatcgacattctacgcacatgcagatggaacgaacata-----aagatatattatct 719  Q
         |||||||| || ||||||| ||||||| || ||||  |||   |||||| |||||  |||| ||||||||||||||     |  |||||||||||    
T  7017830 tccataattaaactactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatct 7017929  T
Q  720 tcaaccatattctga 734  Q
    || ||||||||||||    
T  7017930 tccaccatattctga 7017944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 449 - 751
Target Start/End: Original strand, 37814725 - 37815032
Alignment:
Q  449 tttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaat 548  Q
    ||||||||||||||| |||||||||||||||| |||||| | || |||||||  ||| | | |||| |||||  ||||  | ||||  ||||||||||||    
T  37814725 tttttacctgtaattaaaccagagcatttccaaaggcaaaataattcatacaagattgaaactcggacataatgaagataagtacaatatcttttacaat 37814824  T
Q  549 tgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaatattaaagagtgcttgaaattaaacaacacattaca 648  Q
    ||    ||||||||| || || ||||||  ||||||||| || || |||||||||||||||||| |||| | ||||     |||||||| || |||||||    
T  37814825 tgttcataattaaattaaaccgacatttggttaaaattaaacaaacgtttgaaattcatcaaaacattacaaagtgtccataattaaactactcattaca 37814924  T
Q  649 tatcattacataaaatatctatcgacattctacgcacatgcagatggaacgaacata-----aagatatattatcttcaaccatattctgaaacataaat 743  Q
     ||||||| || ||||  |||   || ||| |||||  | || ||||||||||||||     |  ||||||||||||| ||||||||| |||||||||||    
T  37814925 catcattaaattaaatccctacttactttcaacgcaattacatatggaacgaacatacatatataatatattatcttccaccatattccgaaacataaat 37815024  T
Q  744 cctacgtc 751  Q
    || |||||    
T  37815025 ccgacgtc 37815032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 427 - 609
Target Start/End: Complemental strand, 41799721 - 41799539
Alignment:
Q  427 ttttcaagccattttttgccta-tttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaag 525  Q
    |||||||||||||||| | | | ||||||||||||||| || ||||||||||| | |||||| | || ||||||| |||| | | | || ||||||||||    
T  41799721 ttttcaagccatttttcggccagtttttacctgtaattaaagcagagcatttcgaaaggcaaaataattcatacaacattgaaacttggacataaacaag 41799622  T
Q  526 aacaatacataatcttttacaattgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatca 609  Q
    || |||||| | | ||||||||||| |  ||||||||| || || |||||| ||| ||||||||| || |||||||||||||||    
T  41799621 aaaaataca-atttttttacaattgtccataattaaattaaaccgacatttgattcaaattacacaaacgtttgaaattcatca 41799539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 522 - 612
Target Start/End: Original strand, 30292292 - 30292382
Alignment:
Q  522 caagaacaatacataatcttttacaattgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaa 612  Q
    ||||||||||||||||| || ||||||||||   |||||||||||| | ||||||| ||||||||||||||||||| |||||||| |||||    
T  30292292 caagaacaatacataattttgtacaattgaccaaaattaaatcaattcgacatttcgttaaaattacacgaatgttcgaaattcaacaaaa 30292382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 427 - 609
Target Start/End: Complemental strand, 7762197 - 7762013
Alignment:
Q  427 ttttcaagccatttttt--gcctatttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaa 524  Q
    |||||||||| ||||||  |||  ||||||||||||||| ||||| |||||||  | |||||| |||| ||||||| |||| | | |||  |||||||||    
T  7762197 ttttcaagcctttttttcggccagtttttacctgtaattaaaccaaagcattttgaaaggcaaaacaattcatacaacattgaaactcgaacataaacaa 7762098  T
Q  525 gaacaatacataatcttttacaattgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatca 609  Q
    ||   |||||  |||||||||||||| |  |||||||||||| || ||||||  || ||||||||| || |||||||||||||||    
T  7762097 gatagatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaacgtttgaaattcatca 7762013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 414 - 494
Target Start/End: Original strand, 15394158 - 15394239
Alignment:
Q  414 ttctgcataatggttttcaagccattttttgcctattt-ttacctgtaattcaaccagagcatttccagaggcaatacaact 494  Q
    ||||||||||||||||||||| ||||||  |||||||| |||||||||||||||||| | || |||||||||||||||||||    
T  15394158 ttctgcataatggttttcaagtcattttcggcctatttattacctgtaattcaaccacatcaattccagaggcaatacaact 15394239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 448 - 527
Target Start/End: Original strand, 4196696 - 4196775
Alignment:
Q  448 atttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaa 527  Q
    |||||||||||||||| |||||||||||||||| |||||||| || ||||||| |||| | | |||||||||||||||||    
T  4196696 atttttacctgtaattaaaccagagcatttccaaaggcaatataaatcatacaacattgaaactcggtcataaacaagaa 4196775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 431 - 609
Target Start/End: Original strand, 38407271 - 38407449
Alignment:
Q  431 caagccattttttgcctatttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaa 530  Q
    |||||||||||  |||  ||||||||||||||| || |||| |||||| | |||||| | || ||||||| |||| | | || | |||||||||||| ||    
T  38407271 caagccattttcggccagtttttacctgtaattaaagcagaacatttcgaaaggcaaaataattcatacaacattgaaactcagacataaacaagaaaaa 38407370  T
Q  531 tacataatcttttacaattgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatca 609  Q
    ||||  |||||||| ||||| |  |||||||||||| ||  |||||  || ||||||||| || |||||||||||||||    
T  38407371 tacaatatcttttagaattgtccataattaaatcaaaccggcatttggttcaaattacacaaacgtttgaaattcatca 38407449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 709 - 794
Target Start/End: Original strand, 34122946 - 34123033
Alignment:
Q  709 atatattatcttcaaccatattctgaaacataaatcctacgt--ctatcgtcacgaataagccaatgcttataaatcaccgttttcca 794  Q
    ||||||||||||| ||||||||||||||||||||||  ||||  |||||||| |||||||||||| || ||||| | |||||||||||    
T  34122946 atatattatcttccaccatattctgaaacataaatctgacgtcgctatcgtcgcgaataagccaaggcatataacttaccgttttcca 34123033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 449 - 751
Target Start/End: Original strand, 38855857 - 38856165
Alignment:
Q  449 tttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaat 548  Q
    ||||||||||||||| |||||||  ||||||| |||| | | || |||||||  ||| | | |||||||||| |||||  ||||||  ||||||||||||    
T  38855857 tttttacctgtaattaaaccagacaatttccaaaggctaaataattcatacaatattgaaactcggtcataatcaagataaatacaatatcttttacaat 38855956  T
Q  549 tgactgtaattaaatcaatccaaca-tttcattaaaattacacgaatgtttgaaattcatcaaaatattaaagagtgcttgaaattaaacaacacattac 647  Q
    ||   |||||||||| || || ||| |||  |||| |||| || || |||||||||||||||||| |||| | ||||     |||||||| || ||||||    
T  38855957 tgttcgtaattaaattaaaccgacattttggttaacattaaacaaacgtttgaaattcatcaaaacattacaaagtgtccataattaaactactcattac 38856056  T
Q  648 atatcattacataaaatatctatcgacattctacgcacatgcagatggaacgaacata-----aagatatattatcttcaaccatattctgaaacataaa 742  Q
    | ||||||| ||  |||  |||   |||||| |||||  | || ||||||||||||||     |  ||||||||||||| ||||||||| ||||||||||    
T  38856057 acatcattaaattcaatccctacttacattcaacgcaattacatatggaacgaacatacatatataatatattatcttccaccatattccgaaacataaa 38856156  T
Q  743 tcctacgtc 751  Q
    ||| |||||    
T  38856157 tccgacgtc 38856165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 431 - 590
Target Start/End: Complemental strand, 28388469 - 28388308
Alignment:
Q  431 caagccatttttt--gcctatttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaac 528  Q
    |||||||||||||  |||  ||||||||||||||| |||||||||||||||| |||||| | || |||||||  ||| | | |||| ||||||||| |      
T  28388469 caagccattttttcggccagtttttacctgtaattaaaccagagcatttccaaaggcaaaataattcatacaagattgaaattcggacataaacaaaata 28388370  T
Q  529 aatacataatcttttacaattgactgtaattaaatcaatccaacatttcattaaaattacac 590  Q
    ||||||  || ||||||||||| |  ||||||||| || || ||||||  || |||||||||    
T  28388369 aatacaatattttttacaattgtccataattaaattaaaccgacatttggttcaaattacac 28388308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 709 - 794
Target Start/End: Complemental strand, 43179530 - 43179443
Alignment:
Q  709 atatattatcttcaaccatattctgaaacataaatcctacgt--ctatcgtcacgaataagccaatgcttataaatcaccgttttcca 794  Q
    ||||||||||||| ||||||||| ||||||||||||  ||||  |||||||| |||||||||||| || ||||  | |||||||||||    
T  43179530 atatattatcttccaccatattccgaaacataaatcaaacgtcgctatcgtcgcgaataagccaaggcatatagcttaccgttttcca 43179443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 659 - 713
Target Start/End: Complemental strand, 16440197 - 16440143
Alignment:
Q  659 taaaatatctatcgacattctacgcacatgcagatggaacgaacataaagatata 713  Q
    |||||||| |||||||||||||||||| |||||||| ||| |||| |||||||||    
T  16440197 taaaatatttatcgacattctacgcacgtgcagatgaaacaaacacaaagatata 16440143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 709 - 751
Target Start/End: Original strand, 24050446 - 24050488
Alignment:
Q  709 atatattatcttcaaccatattctgaaacataaatcctacgtc 751  Q
    ||||||||||||| ||||||||||||||||||||||| |||||    
T  24050446 atatattatcttccaccatattctgaaacataaatccgacgtc 24050488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 709 - 751
Target Start/End: Original strand, 24053571 - 24053613
Alignment:
Q  709 atatattatcttcaaccatattctgaaacataaatcctacgtc 751  Q
    ||||||||||||| ||||||||||||||||||||||| |||||    
T  24053571 atatattatcttccaccatattctgaaacataaatccgacgtc 24053613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 449 - 751
Target Start/End: Original strand, 11029151 - 11029457
Alignment:
Q  449 tttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaat 548  Q
    ||||||||||||||| |||||||  ||||||| |||| | | || |||||||  ||| | | |||||||||| |||||  ||| ||  ||||||||||||    
T  11029151 tttttacctgtaattaaaccagacaatttccaaaggctaaataattcatacaatattgaaactcggtcataatcaagataaatgcaatatcttttacaat 11029250  T
Q  549 tgactgtaattaaatcaatccaacatttca-ttaaaattacacgaatgtttgaaattcatcaaaatattaaagagtgcttgaaattaaacaacacattac 647  Q
    ||    ||||||||| || || ||||||   |||| |||| || || |||||||||||||||||| |||| | ||| | |  |||||||| || ||| ||    
T  11029251 tgttcataattaaattaaaccgacattttggttaacattaaacaaacgtttgaaattcatcaaaacattacaaagtccat--aattaaactactcatcac 11029348  T
Q  648 atatcattacataaaatatctatcgacattctacgcacatgcagatggaacgaacataaagatat-----attatcttcaaccatattctgaaacataaa 742  Q
    | ||||||| || ||||  |||   |||||| |||||  | || ||| |||||||||| | ||||     ||||||||| ||||||||| ||||||||||    
T  11029349 acatcattaaattaaatccctacttacattcaacgcaattacatatgaaacgaacatacatatataatatattatcttccaccatattccgaaacataaa 11029448  T
Q  743 tcctacgtc 751  Q
    ||| |||||    
T  11029449 tccgacgtc 11029457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 94; Significance: 2e-45; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 488 - 713
Target Start/End: Complemental strand, 10165730 - 10165506
Alignment:
Q  488 tacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaattgactgtaattaaatcaatccaacatttcattaaaatta 587  Q
    |||||| |||||| || ||| ||||  |||||| |||||||||| |||||||||| || ||||||   |||||||||||| ||||||||  |||||||||    
T  10165730 tacaacccatacaccaattataatccatcataagcaagaacaatgcataatctttcaccattgacaaaaattaaatcaattcaacattttgttaaaatta 10165631  T
Q  588 cacgaatgtttgaaattcatcaaaatattaaagagtgcttgaaattaaacaacacattacatatcattacataaaatatctatcgacattctacgcacat 687  Q
    ||||||||||||||||||| ||||| | ||||||||| |||||||| |||||||||||||| | |||||||| |||| ||||  ||||||||  ||||||    
T  10165630 cacgaatgtttgaaattcaacaaaaga-taaagagtgtttgaaattcaacaacacattacacaacattacatgaaatctctacagacattcttggcacat 10165532  T
Q  688 gcagatggaacgaacataaagatata 713  Q
    |||| ||||||| ||| |||||||||    
T  10165531 gcagttggaacggacacaaagatata 10165506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 426 - 679
Target Start/End: Complemental strand, 25234199 - 25233945
Alignment:
Q  426 gttttcaagccattttttg-cctattt-ttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaaca 523  Q
    |||||||||||| |||| | ||||||| |||||||||||||||| | | || ||| ||||| ||||||||||||||| || ||| |||  || |||||||    
T  25234199 gttttcaagccaattttcgacctatttattacctgtaattcaacaacaacaattctagaggaaatacaactcatacaccaattataattagttataaaca 25234100  T
Q  524 agaacaatacataatcttttacaattgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaatattaaagagt 623  Q
    ||||||||||||||||||| ||||||||    |||||||| ||| ||||||||| ||||||| |||||||||||||||||||| | ||| | |||| | |    
T  25234099 agaacaatacataatctttcacaattgatcaaaattaaattaattcaacatttcgttaaaataacacgaatgtttgaaattcaactaaaca-taaaaaat 25234001  T
Q  624 gcttgaaattaaacaacacattacatatcattacataaaatatctatcgacattct 679  Q
    | |||||||| |||||||||||||||| |||||||| |||| ||||  ||||||||    
T  25234000 gtttgaaattgaacaacacattacataacattacatgaaatctctactgacattct 25233945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 449 - 771
Target Start/End: Original strand, 8459100 - 8459429
Alignment:
Q  449 tttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaat 548  Q
    ||||||||||||||| ||||| |||||||||| |||||||| || ||||||| |||| | | | ||||||||||||||| ||||||  ||||||||||||    
T  8459100 tttttacctgtaattaaaccatagcatttccaaaggcaatataaatcatacaacattgaaacttggtcataaacaagaaaaatacaatatcttttacaat 8459199  T
Q  549 tgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaatattaaagagtgcttgaaattaaacaacacattaca 648  Q
    || |  |||||||||||| || ||||||  || ||||||||| || ||||||||||||||||||  ||||| ||||     ||||||||||| |||||||    
T  8459200 tgtccataattaaatcaaaccgacatttggttcaaattacacaaacgtttgaaattcatcaaaacgttaaaaagtgtccataattaaacaactcattaca 8459299  T
Q  649 tatcattacataaaatatctatcgacattctacgcacatgcagatggaacgaacata-----aagatatattatcttcaaccatattctgaaacataaat 743  Q
     || |||| || ||||  |||   |||||| |||||  | || || |||||||||||     |  ||||||||||||| |||||||| ||||||||||||    
T  8459300 catgattaaattaaatccctacttacattcaacgcaattacatatagaacgaacatacatgtataatatattatcttctaccatattttgaaacataaat 8459399  T
Q  744 cctacgt--ctatcgtcacgaataagccaa 771  Q
    || ||||  |||||||| ||||||||||||    
T  8459400 ccgacgtcgctatcgtcgcgaataagccaa 8459429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 427 - 609
Target Start/End: Complemental strand, 4518369 - 4518186
Alignment:
Q  427 ttttcaagccattttttgccta-tttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaag 525  Q
    |||||||||||||||| | | | ||||||||||||||| ||||| |||||||||| |||||||| || ||||||| |||| | | |||||||||||||||    
T  4518369 ttttcaagccatttttcggccagtttttacctgtaattaaaccaaagcatttccaaaggcaatataaatcatacaacattgaaactcggtcataaacaag 4518270  T
Q  526 aacaatacataatcttttacaattgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatca 609  Q
    || ||||||  |||||||||||||| |  |||||||||||| || ||||||  || ||||||||| || |||||||||||||||    
T  4518269 aaaaatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatca 4518186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 456 - 771
Target Start/End: Complemental strand, 37019319 - 37018997
Alignment:
Q  456 ctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaattgactgt 555  Q
    |||||||| |||||||| |||| || ||| || | || ||||||| |||| | | ||||  ||||||||||  ||||||  |||||||||||||| |  |    
T  37019319 ctgtaattaaaccagagtattttcaaaggtaaaataattcatacaacattgaaactcggatataaacaagataaatacaatatcttttacaattgtccat 37019220  T
Q  556 aattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaatattaaagagtgcttgaaattaaacaacacattacatatcatt 655  Q
    |||||||| || |||||||||  || ||||||||| || ||||||||||||||||||| ||| | ||||     ||||||||||| ||||||| ||||||    
T  37019219 aattaaattaaaccaacatttggttcaaattacacaaacgtttgaaattcatcaaaatgttacaaagtgtccataattaaacaactcattacacatcatt 37019120  T
Q  656 acataaaatatctatcgacattctacgcacatgcagatggaacgaacata-----aagatatattatcttcaaccatattctgaaacataaatcctacgt 750  Q
    | || |||| ||||   |||||| |||||  |||| ||||||||||||||     |  ||||||||||||| ||||||||| ||||||||||||||| ||    
T  37019119 aaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattccgaaacataaatcctatgt 37019020  T
Q  751 --ctatcgtcacgaataagccaa 771  Q
      |||||||| ||||||||||||    
T  37019019 cgctatcgtcgcgaataagccaa 37018997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 449 - 771
Target Start/End: Complemental strand, 5141799 - 5141471
Alignment:
Q  449 tttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaat 548  Q
    ||||||||||||||| || |||| |||||||| |||||||| |||||||||| |||||| | || | |||||||||||| | |||||| ||||||||| |    
T  5141799 tttttacctgtaattaaagcagaacatttccaaaggcaatataactcatacaacatttatactcaggcataaacaagaaaattacata-tcttttacagt 5141701  T
Q  549 tgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaatattaaagagtgcttgaaattaaacaacacattaca 648  Q
    || |  |||||||||||| || |||     ||  |||||| |||||||||||||||||| ||||  ||||| ||||     ||||||||||||||||| |    
T  5141700 tgtccataattaaatcaaaccgacaaggggttcgaattactcgaatgtttgaaattcattaaaacgttaaatagtgtcaataattaaacaacacattata 5141601  T
Q  649 tatcattacataaaatatctatcgacattctacgcacatgcagatggaacgaacata-----aagatatattatcttcaaccatattctgaaacataaat 743  Q
    |||| ||| || |||| ||||  |||||||||||||  |||| ||||||||||||||     |  ||||||||||||| | ||||||| |||||||| ||    
T  5141600 tatcgttaaattaaatctctactgacattctacgcaattgcatatggaacgaacatacatatataatatattatcttccatcatattccgaaacatacat 5141501  T
Q  744 cctacgt--ctatcgtcacgaataagccaa 771  Q
    |  ||||  |||||||| ||||||||||||    
T  5141500 ctgacgtcgctatcgtcgcgaataagccaa 5141471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 449 - 768
Target Start/End: Original strand, 7966125 - 7966458
Alignment:
Q  449 tttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatc-ttttacaa 547  Q
    ||||||||||||||| |||||||||||||||| |||||||| |||| ||||| |||||| | || |||||||||||| | ||||||  ||| ||||||||    
T  7966125 tttttacctgtaatttaaccagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataaacaagtaaaatacaatatctttttacaa 7966224  T
Q  548 ttgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaatattaaagagtgcttgaaattaaacaacacattac 647  Q
    ||| |  |||||||||||| || ||||||  || ||| ||||| || ||||||||||||||||||  ||| | ||||     ||||||||||||||||||    
T  7966225 ttgtccataattaaatcaaaccgacatttggttcaaaatacacaaaagtttgaaattcatcaaaacgttacatagtgtccataattaaacaacacattac 7966324  T
Q  648 at------atcattacataaaatatctatcgacattctacgcacatgcagatggaacgaacataaa-----gatatattatcttcaaccatattctgaaa 736  Q
    ||      ||||||| || ||||  |||   |||||| |||||  |||| |||||||||||||| |      ||||||||||||| ||||||||| ||||    
T  7966325 atttacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatgtaatatattatcttccaccatattccgaaa 7966424  T
Q  737 cataaatcctacgt--ctatcgtcacgaataagc 768  Q
    ||||||||  ||||  |||||||| |||||||||    
T  7966425 cataaatctgacgtcgctatcgtcgcgaataagc 7966458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 430 - 612
Target Start/End: Complemental strand, 51666616 - 51666433
Alignment:
Q  430 tcaagccattttttg-cctatttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaac 528  Q
    ||||||||||||| | || |||||||||||||||| ||||| |||||||||| |||||||| || ||||||| |||| | | |||||||||||||||||     
T  51666616 tcaagccatttttcggccaatttttacctgtaattaaaccaaagcatttccaaaggcaatataaatcatacaacattgaaactcggtcataaacaagaaa 51666517  T
Q  529 aatacataatcttttacaattgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaa 612  Q
    ||||||  || ||||||||||| |  |||||||||||| || ||||||  || ||||||||  || ||||||||||||||||||    
T  51666516 aatacaatatattttacaattgtccataattaaatcaaaccgacatttggttcaaattacataaaagtttgaaattcatcaaaa 51666433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 449 - 617
Target Start/End: Complemental strand, 46979188 - 46979020
Alignment:
Q  449 tttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaat 548  Q
    ||||||| ||||||| || ||||||||||||| |||||||| || ||||||| |||| | | ||||||||||||||||| |||| |  ||||||||||||    
T  46979188 tttttacttgtaattaaatcagagcatttccaaaggcaatataaatcatacaacattgaaactcggtcataaacaagaaaaatagaatatcttttacaat 46979089  T
Q  549 tgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaatatta 617  Q
    || |  |||||||||||| |  |||||| ||| ||||||||| || |||||||||||||||||| ||||    
T  46979088 tgtccataattaaatcaaacagacatttgattcaaattacacaaaagtttgaaattcatcaaaacatta 46979020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 449 - 611
Target Start/End: Original strand, 19495182 - 19495344
Alignment:
Q  449 tttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaat 548  Q
    ||||||||||||||| |||||||||||||||| ||| |||| || ||||||| |||||| | || |||||||| ||||| ||||||  ||||||||||||    
T  19495182 tttttacctgtaattaaaccagagcatttccaaaggtaatataattcatacaacatttaaactcagtcataaataagaaaaatacaatatcttttacaat 19495281  T
Q  549 tgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaa 611  Q
    || |  |||||||||||| || ||||||  || ||| ||||| || |||||||||||||||||    
T  19495282 tgtccataattaaatcaaaccgacatttggttcaaaatacacaaaagtttgaaattcatcaaa 19495344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 431 - 612
Target Start/End: Complemental strand, 13178083 - 13177903
Alignment:
Q  431 caagccattttttgccta-tttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaaca 529  Q
    |||||||||||||| | | ||||||||||||||| |||||||||||||||| |||||||| |||| |||  | ||||| | || |||||||||||| | |    
T  13178083 caagccattttttgaccagtttttacctgtaatttaaccagagcatttccaaaggcaatataacttata--ttatttaaactcagtcataaacaagtaaa 13177986  T
Q  530 atacataatcttttacaattgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaa 612  Q
    ||| |  |||||||||||||| |  |||||||||||| || ||||||  || ||||||||| || ||||||||||||||||||    
T  13177985 atataatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaa 13177903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 449 - 751
Target Start/End: Complemental strand, 44469941 - 44469634
Alignment:
Q  449 tttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaat 548  Q
    ||||||||||||||| ||||||||||||| || |||||| | || |||||||  ||| | | |||| ||||| |||||  | ||||  ||||||||||||    
T  44469941 tttttacctgtaattgaaccagagcattttcaaaggcaaaataattcatacaagattgaaactcggacataatcaagataagtacaatatcttttacaat 44469842  T
Q  549 tgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaatattaaagagtgcttgaaattaaacaacacattaca 648  Q
    ||    ||||||||| || || ||||||  ||||||||| || || |||||||||||||||||| |||| | ||||     ||||||||||| |||||||    
T  44469841 tgttcataattaaattaaaccgacatttggttaaaattaaacaaacgtttgaaattcatcaaaacattacaaagtgtccataattaaacaactcattaca 44469742  T
Q  649 tatcattacataaaatatctatcgacattctacgcacatgcagatggaacgaacata-----aagatatattatcttcaaccatattctgaaacataaat 743  Q
     ||||||| || ||||  |||   |||||| |||||  |||| ||||||||||||||     |  ||||||||||||| ||||||||| |||||||||||    
T  44469741 catcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattccgaaacataaat 44469642  T
Q  744 cctacgtc 751  Q
    || |||||    
T  44469641 ccgacgtc 44469634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 449 - 609
Target Start/End: Original strand, 94540 - 94700
Alignment:
Q  449 tttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaat 548  Q
    ||||||||||||||| || ||||||||||| | |||||| |||| ||||||| |||| | | |||| |||||||||||  ||||||  ||||||||||||    
T  94540 tttttacctgtaattaaagcagagcatttcgaaaggcaaaacaattcatacaacattgaaactcggacataaacaagataaatacaatatcttttacaat 94639  T
Q  549 tgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatca 609  Q
    || |  |||||||||||| || ||||||  || ||||||||| || |||||||||||||||    
T  94640 tgtccataattaaatcaaaccgacatttggttcaaattacacaaacgtttgaaattcatca 94700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 428 - 611
Target Start/End: Complemental strand, 1656042 - 1655858
Alignment:
Q  428 tttcaagccattttttgccta-tttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaaga 526  Q
    ||||||||||||||| | | | ||||||||||||||| || ||||||||||||| |||||||| |||| ||||| |||||| | |  ||||||||||||     
T  1656042 tttcaagccatttttcggccagtttttacctgtaatttaatcagagcatttccaaaggcaatataacttatacaacatttaaatttagtcataaacaagt 1655943  T
Q  527 acaatacataatcttttacaattgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaa 611  Q
    | ||||||  |||||||||||||| |  |||||||||||| |  ||||||  || ||| ||||| || |||||||||||||||||    
T  1655942 aaaatacaatatcttttacaattgtccataattaaatcaaacggacatttggttcaaaatacacaaaagtttgaaattcatcaaa 1655858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 449 - 617
Target Start/End: Complemental strand, 46886318 - 46886150
Alignment:
Q  449 tttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaat 548  Q
    ||||||||||||||| ||||||||| |||||| |||||| | || ||||||| |||| | | |||| |||||||||||  ||||||  ||||||||||||    
T  46886318 tttttacctgtaattaaaccagagcctttccaaaggcaaaataattcatacaacattgaaactcggacataaacaagataaatacaatatcttttacaat 46886219  T
Q  549 tgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaatatta 617  Q
    || |  ||||||||| || || ||||||  |||||||||||| || |||||||||||||| ||| ||||    
T  46886218 tgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcgaaacatta 46886150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 449 - 751
Target Start/End: Original strand, 9710720 - 9711027
Alignment:
Q  449 tttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaat 548  Q
    ||||||||||||||| ||| |||| ||||||| ||| || | || ||||||| |||| | | | || |||||||||||  ||||||  ||||||||||||    
T  9710720 tttttacctgtaattaaacaagagtatttccaaaggtaaaataattcatacaacattgaaactaggacataaacaagataaatacaatatcttttacaat 9710819  T
Q  549 tgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaatattaaagagtgcttgaaattaaacaacacattaca 648  Q
    || |  |||||||||||| |  ||||||  || ||||||||| || ||||||||||||||||||| ||| | ||||     ||||||||||| |||||||    
T  9710820 tgtccataattaaatcaaactgacatttggttcaaattacacaaacgtttgaaattcatcaaaatgttacaaagtgtccataattaaacaactcattaca 9710919  T
Q  649 tatcattacataaaatatctatcgacattctacgcacatgcagatggaacgaacata-----aagatatattatcttcaaccatattctgaaacataaat 743  Q
     ||||||| || ||||  |||   |||||| |||||  |||| |||||| |||||||     |  ||||||||||||  ||||||||| |||||||||||    
T  9710920 catcattaaattaaatccctacttacattcaacgcaattgcatatggaaagaacatacatatataatatattatctttcaccatattccgaaacataaat 9711019  T
Q  744 cctacgtc 751  Q
    || |||||    
T  9711020 ccgacgtc 9711027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 431 - 601
Target Start/End: Complemental strand, 47715036 - 47714865
Alignment:
Q  431 caagccattttttgccta-tttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaaca 529  Q
    |||||||||||| | ||| ||||||||| ||||||||||||||||||||||||  |||||  | || |||| |||||| | || ||||||||||| || |    
T  47715036 caagccatttttcggctagtttttacctataattcaaccagagcatttccagaaacaatattagtcgtacaacatttatactcagtcataaacaacaaaa 47714937  T
Q  530 atacataatcttttacaattgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaa 601  Q
    |||||| |||||||| |  || |  ||||| ||||||||| |||||||||||||||||||  ||||||||||    
T  47714936 atacattatcttttatagctgtccataattgaatcaatccgacatttcattaaaattacattaatgtttgaa 47714865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 449 - 609
Target Start/End: Complemental strand, 22527625 - 22527465
Alignment:
Q  449 tttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaat 548  Q
    ||||||||||||||| |||||||||||||| | |||||| |||| ||||||| |||| | | |||| |||||||||||  ||||||  || |||||||||    
T  22527625 tttttacctgtaattaaaccagagcatttcgaaaggcaaaacaattcatacaacattgaaactcggacataaacaagataaatacaatatgttttacaat 22527526  T
Q  549 tgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatca 609  Q
    || |  |||||||||||| || ||||||  || ||||||||| || |||| ||||||||||    
T  22527525 tgtccataattaaatcaaaccgacatttggttcaaattacacaaacgtttaaaattcatca 22527465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 449 - 617
Target Start/End: Original strand, 50113450 - 50113618
Alignment:
Q  449 tttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaat 548  Q
    |||||| |||||||| |||||||||||||||| |||||| | || ||||||| | || | | || | |||||||||||  ||||||  ||||||||||||    
T  50113450 tttttaactgtaattaaaccagagcatttccaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaat 50113549  T
Q  549 tgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaatatta 617  Q
    || |  ||||||||| || || ||||||  |||||||||||| || |||||||||||||||||| ||||    
T  50113550 tgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacatta 50113618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 449 - 771
Target Start/End: Complemental strand, 25040011 - 25039682
Alignment:
Q  449 tttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaat 548  Q
    ||||||||||||||| ||||||| |||||||| || ||||| ||||  |||| |||||| | || |||||||||||| | ||||||  ||||||||||||    
T  25040011 tttttacctgtaatttaaccagaacatttccaaagacaatataacttgtacaacatttaaactcagtcataaacaagtaaaatacaatatcttttacaat 25039912  T
Q  549 tgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaatattaaagagtg--cttgaaattaaacaacacatta 646  Q
    || |  |||||||||||| |  | ||||  || ||| ||||| || |||| ||||||||||||   ||| | ||||  | || |  ||||||||||||||    
T  25039911 tgtccataattaaatcaaactgatatttggttcaaaatacacaaaagtttaaaattcatcaaatcgttacatagtgtccatgca--taaacaacacatta 25039814  T
Q  647 catatcattacataaaatatctatcgacattctacgcacatgcagatggaacgaacata-----aagatatattatcttcaaccatattctgaaacataa 741  Q
    || ||||||| || ||||  |||   |||||| |||||  || | ||||||||||||||     |  ||||||||||||| ||||||||| |||||||||    
T  25039813 cacatcattaaattaaatccctacttacattcaacgcaattgtatatggaacgaacatacacatataatatattatcttccaccatattccgaaacataa 25039714  T
Q  742 atcctacgtc--tatcgtcacgaataagccaa 771  Q
    |||| |||||  ||||| | ||||||||||||    
T  25039713 atccgacgtcgttatcgacgcgaataagccaa 25039682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 449 - 610
Target Start/End: Original strand, 19521739 - 19521900
Alignment:
Q  449 tttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaat 548  Q
    |||||||||| |||| || ||||||||||| | |||||| | || ||||||| |||| | | |||| |||||||||||| |||||   ||||||||||||    
T  19521739 tttttacctgcaattaaagcagagcatttcgaaaggcaaaataattcatacagcattgaaactcggacataaacaagaaaaatactatatcttttacaat 19521838  T
Q  549 tgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaa 610  Q
    || || ||||||||||||  | ||||||  || ||||||||| || ||||||||||||||||    
T  19521839 tgtctataattaaatcaaatcgacatttggttcaaattacacaaacgtttgaaattcatcaa 19521900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 448 - 609
Target Start/End: Original strand, 31780109 - 31780270
Alignment:
Q  448 atttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaa 547  Q
    |||||||||||||||| | |||||||||||| |  ||||| |||| ||||||| |||| | | |||| |||||||||||  ||||||  |||||||||||    
T  31780109 atttttacctgtaattaagccagagcatttcgaatggcaaaacaattcatacaacattgaaactcggacataaacaagataaatacaatatcttttacaa 31780208  T
Q  548 ttgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatca 609  Q
    ||| |  |||||||||||| || |||||   || ||||||||| || |||||||||||||||    
T  31780209 ttgtccataattaaatcaaaccgacattaggttcaaattacacaaacgtttgaaattcatca 31780270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 570 - 648
Target Start/End: Original strand, 1179877 - 1179955
Alignment:
Q  570 aacatttcattaaaattacacgaatgtttgaaattcatcaaaatattaaagagtgcttgaaattaaacaacacattaca 648  Q
    |||||||| |||||||||||||||||||||||||||||||||| |||||||||||     |||||||||||||||||||    
T  1179877 aacatttcgttaaaattacacgaatgtttgaaattcatcaaaacattaaagagtgtccacaattaaacaacacattaca 1179955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 448 - 751
Target Start/End: Original strand, 29352375 - 29352683
Alignment:
Q  448 atttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaa 547  Q
    |||||||| ||||||| ||||||||||||| || |||||| | || |||||||  ||| | | |||| |||||  ||||  ||||||  |||||||||||    
T  29352375 atttttacttgtaattaaaccagagcatttgcaaaggcaaaataattcatacaagattgaaactcggacataatgaagataaatacaatatcttttacaa 29352474  T
Q  548 ttgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaatattaaagagtgcttgaaattaaacaacacattac 647  Q
    |||    ||||||||| || || ||||||  ||||||||| || || |||||||||||||||||| |||| | ||||     |||||||| || ||||||    
T  29352475 ttgttaataattaaattaaaccgacatttggttaaaattaaacaaacgtttgaaattcatcaaaacattacaaagtgtccataattaaactactcattac 29352574  T
Q  648 atatcattacataaaatatctatcgacattctacgcacatgcagatggaacgaacata-----aagatatattatcttcaaccatattctgaaacataaa 742  Q
    | ||||||| || ||||  |||   |||||| | |||  | || ||||||||||||||     |  ||||||||||||| ||||||||| ||||||||||    
T  29352575 acatcattaaattaaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatattatcttccaccatattccgaaacataaa 29352674  T
Q  743 tcctacgtc 751  Q
    ||| |||||    
T  29352675 tccgacgtc 29352683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 466 - 617
Target Start/End: Original strand, 36072522 - 36072673
Alignment:
Q  466 accagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaattgactgtaattaaatca 565  Q
    |||||| |||||||| |||||||| |||| ||||| || ||| | || |||||||||||| | ||||||  ||||||||||||||    |||||||||||    
T  36072522 accagaacatttccaaaggcaatataacttatacaacagttaaactcagtcataaacaagtaaaatacaatatcttttacaattgttcataattaaatca 36072621  T
Q  566 atccaacatttcattaaaattacacgaatgtttgaaattcatcaaaatatta 617  Q
    | || ||||||  || ||| ||||| || |||||||||||||||||| ||||    
T  36072622 aaccgacatttggttcaaaatacacaaaagtttgaaattcatcaaaacatta 36072673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 450 - 609
Target Start/End: Complemental strand, 52805489 - 52805330
Alignment:
Q  450 ttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaatt 549  Q
    |||||||||||||| |||||||| ||||||| |||||| | || ||||| | |||| | | || | |||||| ||||| ||||||  |||||||||||||    
T  52805489 ttttacctgtaattaaaccagagtatttccaaaggcaaaataattcatataacattgaaactctgacataaataagaaaaatacaatatcttttacaatt 52805390  T
Q  550 gactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatca 609  Q
    | |  ||||||||| || || ||||||  || ||||||||| || |||||||||||||||    
T  52805389 gtccataattaaattaaaccgacatttggttcaaattacacaaacgtttgaaattcatca 52805330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 514 - 656
Target Start/End: Original strand, 38690117 - 38690259
Alignment:
Q  514 gtcataaacaagaacaatacataatcttttacaattgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaat 613  Q
    |||||||| ||||| ||||||  |||||||||||||| |  || ||||||||| || |||||| ||| ||||||||| || ||||||||||||||||||     
T  38690117 gtcataaataagaaaaatacaatatcttttacaattgtccatagttaaatcaaaccgacatttgattcaaattacacaaaagtttgaaattcatcaaaac 38690216  T
Q  614 attaaagagtgcttgaaattaaacaacacattacatatcatta 656  Q
     ||| | ||||     ||||||||||||||||||| |||||||    
T  38690217 gttacaaagtgtccataattaaacaacacattacacatcatta 38690259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 431 - 617
Target Start/End: Complemental strand, 15051298 - 15051110
Alignment:
Q  431 caagccatttttt--gcctatttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaac 528  Q
    |||||||||||||  |||  ||||||||||||||| |||||||||||||||| |||||| | || |||||||  ||| | | |||| |||||  ||||      
T  15051298 caagccattttttcggccagtttttacctgtaattaaaccagagcatttccaaaggcaaaataattcatacaagattgaaactcggacataatgaagata 15051199  T
Q  529 aatacataatcttttacaattgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaatatta 617  Q
    | ||||  ||||||||||||||    ||||||||| || || ||||||  ||||||||| || || |||||||||||||||||| ||||    
T  15051198 agtacaatatcttttacaattgttcataattaaattaaaccgacatttggttaaaattaaacaaacgtttgaaattcatcaaaacatta 15051110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 431 - 617
Target Start/End: Complemental strand, 20353885 - 20353697
Alignment:
Q  431 caagccatttttt--gcctatttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaac 528  Q
    |||||||||||||  |||  ||||||||||||||| |||||||||||||||| ||| |||| || |||||||  ||| | | |||| |||||  ||||      
T  20353885 caagccattttttcggccagtttttacctgtaattaaaccagagcatttccaaaggtaatataattcatacaagattgaaactcggacataatgaagaca 20353786  T
Q  529 aatacataatcttttacaattgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaatatta 617  Q
    ||||||  ||||||||||||||    ||||||||| || || ||||||  ||||||||| ||  | |||||||||||||||||| ||||    
T  20353785 aatacaatatcttttacaattgttcataattaaattaaaccgacatttggttaaaattaaacagacgtttgaaattcatcaaaacatta 20353697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 449 - 610
Target Start/End: Complemental strand, 22345974 - 22345818
Alignment:
Q  449 tttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaat 548  Q
    ||||||||||||||| | |||||||||||||| |||||||| || ||||||| |||| | | |||| |     |||||| ||||||  ||||||||||||    
T  22345974 tttttacctgtaattaagccagagcatttccaaaggcaatataaatcatacaacattgaaactcggac-----caagaaaaatacaatatcttttacaat 22345880  T
Q  549 tgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaa 610  Q
    || |  ||| |||||||| || ||||||  || ||||||||| || ||||||||||||||||    
T  22345879 tgtccataagtaaatcaaaccgacatttggttcaaattacacaaacgtttgaaattcatcaa 22345818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 449 - 609
Target Start/End: Complemental strand, 471000 - 470840
Alignment:
Q  449 tttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaat 548  Q
    ||||||||||||||| |||||||||||||| | |||||| |||| ||||||| |||| | | |||| |||||||||||  | ||||  ||||||||| ||    
T  471000 tttttacctgtaattaaaccagagcatttcgaaaggcaaaacaattcatacaacattgaaactcggacataaacaagataagtacaatatcttttaccat 470901  T
Q  549 tgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatca 609  Q
    ||    ||||| |||||| || ||||||  || |||||| || || |||||||||||||||    
T  470900 tgttcataatttaatcaaaccgacatttggttcaaattatacaaacgtttgaaattcatca 470840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 431 - 751
Target Start/End: Complemental strand, 30909979 - 30909652
Alignment:
Q  431 caagccatttttt--gcctatttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaac 528  Q
    |||||||||||||  |||  ||||||||||||||| |||||||||||||||| |||||| | || |||||||  ||| | | |||| |||||  || |      
T  30909979 caagccattttttcggccagtttttacctgtaattaaaccagagcatttccaaaggcaaaataattcatacaagattgaaactcggacataatgaacata 30909880  T
Q  529 aatacataatcttttacaattgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaatattaaagagtgcttg 628  Q
    | ||||  ||||||||||||||    ||||||||| || || || |||  ||||||||| || || |||||||||||||||||| |||| | ||||        
T  30909879 agtacaatatcttttacaattgttcataattaaattaaaccgacgtttggttaaaattaaacaaacgtttgaaattcatcaaaacattacaaagtgtcca 30909780  T
Q  629 aaattaaacaacacattacatatcattacataaaatatctatcgacattctacgcacatgcagatggaacgaacata-----aagatatattatcttcaa 723  Q
     |||||||  || ||||||| ||||||| || ||||  |||   |||||| |||||  |||| ||| ||||||||||     |  ||||||||||||| |    
T  30909779 taattaaagtactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatgaaacgaacatacatatataatatattatcttcca 30909680  T
Q  724 ccatattctgaaacataaatcctacgtc 751  Q
    |||||||| ||||||||||||| |||||    
T  30909679 ccatattccgaaacataaatccgacgtc 30909652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 456 - 609
Target Start/End: Original strand, 16281846 - 16281999
Alignment:
Q  456 ctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaattgactgt 555  Q
    |||||||| || ||||||||||| | |||||| | || ||||||| |||| | | |||| |||||||||||| ||||||  || ||||||||||| |  |    
T  16281846 ctgtaattaaagcagagcatttcgaaaggcaaaataattcatacaacattaaaactcggacataaacaagaaaaatacaatattttttacaattgtccat 16281945  T
Q  556 aattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatca 609  Q
    |||||||| || || |||| |  || ||||||||| || |||||||||||||||    
T  16281946 aattaaattaaaccgacatctggttcaaattacacaaacgtttgaaattcatca 16281999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 449 - 605
Target Start/End: Complemental strand, 21144561 - 21144405
Alignment:
Q  449 tttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaat 548  Q
    |||||| |||||| | || ||||| ||||| | |||||| | || ||||||| |||| | | |||  |||||||||||| ||||||  ||||||||||||    
T  21144561 tttttatctgtaagtaaagcagagaatttcgaaaggcaaaataattcatacaacattgaaactcgaacataaacaagaaaaatacaatatcttttacaat 21144462  T
Q  549 tgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattc 605  Q
    || || ||||||||||||  | ||||||  || ||||||||| || |||||||||||    
T  21144461 tgtctataattaaatcaaatcgacatttggttcaaattacacaaacgtttgaaattc 21144405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 514 - 660
Target Start/End: Original strand, 33168111 - 33168257
Alignment:
Q  514 gtcataaacaagaacaatacataatcttttacaattgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaat 613  Q
    |||||||||||| | |||| || |||||||||| ||| |  |||||||||||| || ||||||  || ||| |||||||| |||||||| |||||||||     
T  33168111 gtcataaacaaggaaaatatattatcttttacagttgtccataattaaatcaaaccgacatttagttcaaagtacacgaaagtttgaaaatcatcaaaac 33168210  T
Q  614 attaaagagtgcttgaaattaaacaacacattacatatcattacata 660  Q
     ||| | ||||     |||||||||||||||||||  ||||||||||    
T  33168211 gttacatagtgtccataattaaacaacacattacaactcattacata 33168257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 709 - 771
Target Start/End: Complemental strand, 1655745 - 1655681
Alignment:
Q  709 atatattatcttcaaccatattctgaaacataaatcctacgt--ctatcgtcacgaataagccaa 771  Q
    ||||||||||||| ||||||||| ||||||||||||| ||||  |||||||| ||||||||||||    
T  1655745 atatattatcttccaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaa 1655681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 709 - 771
Target Start/End: Original strand, 19495460 - 19495524
Alignment:
Q  709 atatattatcttcaaccatattctgaaacataaatcctacgt--ctatcgtcacgaataagccaa 771  Q
    ||||||||||||| ||||||||| ||||||||||||| ||||  |||||||| ||||||||||||    
T  19495460 atatattatcttccaccatattccgaaacataaatccaacgtcgctatcgtctcgaataagccaa 19495524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 537 - 751
Target Start/End: Complemental strand, 5082206 - 5081987
Alignment:
Q  537 atcttttacaattgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaatattaaagagtgcttgaaattaaa 636  Q
    ||||||||||||||    ||||||||| || || ||||||  ||||||||| || || |||||||||||||||||| |||| | ||||     |||||||    
T  5082206 atcttttacaattgttcataattaaattaaaccgacatttggttaaaattaaacaaacgtttgaaattcatcaaaacattacaaagtgtccataattaaa 5082107  T
Q  637 caacacattacatatcattacataaaatatctatcgacattctacgcacatgcagatggaacgaacataaagatata-----ttatcttcaaccatattc 731  Q
      || | ||||| ||||||| || ||||   |||  |||||| |||||  |||| |||||||||||||| | |||||     |||||||| |||||||||    
T  5082106 gtactccttacacatcattaaattaaatccatatttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattc 5082007  T
Q  732 tgaaacataaatcctacgtc 751  Q
     ||||||||||||| |||||    
T  5082006 cgaaacataaatccgacgtc 5081987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 431 - 751
Target Start/End: Original strand, 38771752 - 38772081
Alignment:
Q  431 caagccatttttt--gcctatttttacctgtaattcaaccagagcatttccagaggcaatacaactcata--catcatttacaatcggtcataaacaaga 526  Q
    |||||||||||||  |||  ||||||||||||||| |||||||||||||||| ||| |||| || |||||   || ||| | | |||| |||||  ||||    
T  38771752 caagccattttttcggccagtttttacctgtaattaaaccagagcatttccaaaggtaatataattcatatgtatgattgaaactcggacataatgaaga 38771851  T
Q  527 acaatacataatcttttacaattgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaatattaaagagtgct 626  Q
      ||||||  ||| ||||||||||    ||||||||| || || ||||||  ||||||||| ||  | |||||||||||||||||| |||| | ||||      
T  38771852 taaatacaatatcctttacaattgttcataattaaattaaaccgacatttggttaaaattaaacagacgtttgaaattcatcaaaacattacaaagtgtc 38771951  T
Q  627 tgaaattaaacaacacattacatatcattacataaaatatctatcgacattctacgcacatgcagatggaacgaacata-----aagatatattatcttc 721  Q
       |||||||| || ||||||| ||||||| || ||||  |||   |||||| | |||  | || ||||||||||||||     |  ||||||| |||||    
T  38771952 cataattaaactactcattacacatcattaaattaaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatattgtcttc 38772051  T
Q  722 aaccatattctgaaacataaatcctacgtc 751  Q
     ||||||||| ||||||||||||| |||||    
T  38772052 caccatattccgaaacataaatccgacgtc 38772081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 709 - 751
Target Start/End: Original strand, 6558309 - 6558351
Alignment:
Q  709 atatattatcttcaaccatattctgaaacataaatcctacgtc 751  Q
    ||||||||||||| ||||||||||||||||||||||| |||||    
T  6558309 atatattatcttccaccatattctgaaacataaatccgacgtc 6558351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 630 - 751
Target Start/End: Original strand, 12643529 - 12643655
Alignment:
Q  630 aattaaacaacacattacatatcattacataaaatatctatcgacattctacgcacatgcagatggaacgaacata-----aagatatattatcttcaac 724  Q
    ||||||||||| ||||||| ||||||| || ||||  |||   |||||| |||||  |||| ||||||||||||||     |  ||||||||| ||| ||    
T  12643529 aattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattattttccac 12643628  T
Q  725 catattctgaaacataaatcctacgtc 751  Q
    ||||||||||||||||||||| |||||    
T  12643629 catattctgaaacataaatccgacgtc 12643655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 466 - 611
Target Start/End: Original strand, 6558047 - 6558192
Alignment:
Q  466 accagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaattgactgtaattaaatca 565  Q
    ||||||||||||||| |||||| | || |||||||  ||| | | |||| |||||  ||||  | ||||  ||||||||||||||    ||||||||| |    
T  6558047 accagagcatttccaaaggcaaaataattcatacaagattgaaactcggacataatgaagataagtacaatatcttttacaattgttcataattaaatta 6558146  T
Q  566 atccaacatttcattaaaattacacgaatgtttgaaattcatcaaa 611  Q
    | || ||||||  ||||||||| || ||||||||||||||||||||    
T  6558147 aaccgacatttggttaaaattaaacaaatgtttgaaattcatcaaa 6558192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 449 - 751
Target Start/End: Complemental strand, 13633803 - 13633495
Alignment:
Q  449 tttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaat 548  Q
    ||||||||||||||| |||||||  ||||||| |||| | | || |||||||  ||| | | |||||||||| |||||  ||||||  ||||||||||||    
T  13633803 tttttacctgtaattaaaccagacaatttccaaaggctaaataattcatacaatattgaaactcggtcataatcaagataaatacaatatcttttacaat 13633704  T
Q  549 tgactgtaattaaatcaatccaacatttca-ttaaaattacacgaatgtttgaaattcatcaaaatattaaagagtgcttgaaattaaacaacacattac 647  Q
    ||    |||||||||  | || ||||||   |||| |||| || || |||||||||||||||||| |||| | ||||     |||||||| || ||||||    
T  13633703 tgttcataattaaatttaaccgacattttggttaacattaaacaaacgtttgaaattcatcaaaacattacaaagtgtccataattaaactactcattac 13633604  T
Q  648 atatcattacataaaatatctatcgacattctacgcacatgcagatggaacgaacataaagatata-----ttatcttcaaccatattctgaaacataaa 742  Q
    | |||| || || ||||  |||   |||||| |||||  | || ||||||| |||||| | |||||     |||||||| ||||||||| ||||||||||    
T  13633603 acatcaataaattaaatccctacttacattcaacgcaattacatatggaacaaacatacatatataatatattatcttccaccatattccgaaacataaa 13633504  T
Q  743 tcctacgtc 751  Q
    ||| |||||    
T  13633503 tccgacgtc 13633495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 431 - 500
Target Start/End: Complemental strand, 23359299 - 23359228
Alignment:
Q  431 caagccatttttt--gcctatttttacctgtaattcaaccagagcatttccagaggcaatacaactcataca 500  Q
    |||||||||||||  |||  ||||||||||||||| |||||||||||||||| |||||| | || |||||||    
T  23359299 caagccattttttcggccagtttttacctgtaattaaaccagagcatttccaaaggcaaaataattcataca 23359228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 709 - 751
Target Start/End: Complemental strand, 13177791 - 13177749
Alignment:
Q  709 atatattatcttcaaccatattctgaaacataaatcctacgtc 751  Q
    ||||||||||||| ||||||||| ||||||||||||| |||||    
T  13177791 atatattatcttccaccatattccgaaacataaatccgacgtc 13177749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 642 - 751
Target Start/End: Original strand, 36072708 - 36072822
Alignment:
Q  642 cattacatatcattacataaaatatctatcgacattctacgcacatgcagatggaacgaacata-----aagatatattatcttcaaccatattctgaaa 736  Q
    ||||||| ||||||| || |||| ||||   |||||| |||||  |||| ||||||||||||||     |  ||||||||||||| ||||||||| ||||    
T  36072708 cattacacatcattaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattccgaaa 36072807  T
Q  737 cataaatcctacgtc 751  Q
    ||||||||| |||||    
T  36072808 cataaatccgacgtc 36072822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 630 - 771
Target Start/End: Original strand, 50113645 - 50113793
Alignment:
Q  630 aattaaacaacacattacatatcattacataaaatatctatcgacattctacgcacatgcagatggaacgaacataaagatat-----attatcttcaac 724  Q
    ||||||||||| ||||||| || |||| || ||||  |||   |||||| || ||  |||| |||||||||||||| | ||||     ||||||||| ||    
T  50113645 aattaaacaactcattacacattattaaattaaatccctacttacattcaacacaattgcatatggaacgaacatacatatataatatattatcttccac 50113744  T
Q  725 catattctgaaacataaatcctacgt--ctatcgtcacgaataagccaa 771  Q
    ||||||| ||||||||||||  ||||  |||||||| ||||||||||||    
T  50113745 catattccgaaacataaatctgacgtcgctatcgtcgcgaataagccaa 50113793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 87; Significance: 3e-41; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 515 - 713
Target Start/End: Original strand, 7314585 - 7314782
Alignment:
Q  515 tcataaacaagaacaatacataatcttttacaattgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaata 614  Q
    ||||||| |||||||||||||||||||| |||||||||   |||||||||||| | ||||||  ||||||||| |||||||||||||||||| ||||| |    
T  7314585 tcataaataagaacaatacataatctttcacaattgaccaaaattaaatcaattcgacattttgttaaaattatacgaatgtttgaaattcaacaaaaca 7314684  T
Q  615 ttaaagagtgcttgaaattaaacaacacattacatatcattacataaaatatctatcgacattctacgcacatgcagatggaacgaacataaagatata 713  Q
     |||||| || |||||||| |||||||||||||||| |||||| | |||| ||||| |||||| | |||| |||||| |||||| |||| |||||||||    
T  7314685 -taaagaatgtttgaaattgaacaacacattacataacattacctgaaatgtctattgacattttgcgcaaatgcagttggaacaaacacaaagatata 7314782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 414 - 766
Target Start/End: Complemental strand, 14014001 - 14013652
Alignment:
Q  414 ttctgcataatggttttcaagccattttttgcctattt-ttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatc 512  Q
    |||||||||||||  ||||| |||||||   ||||||| |||||||||||||||| | | || |||||||| |||||||||| |  ||||||||   | |    
T  14014001 ttctgcataatggaattcaaaccattttcgccctatttattacctgtaattcaac-acatcaattccagagccaatacaacttaggcatcattttggaac 14013903  T
Q  513 ggtcataaacaagaacaatacataatcttttacaattgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaa 612  Q
      ||||||||||||||||||||||||||||||||| ||||    ||||||||| ||  | |||| |||||||||||| ||| |||| ||||| |||||||    
T  14013902 attcataaacaagaacaatacataatcttttacaactgaccaacattaaatcagtctgatattttattaaaattacatgaacgtttcaaatttatcaaaa 14013803  T
Q  613 tattaaagagtgcttgaaattaaacaacacattacatatcattacataaaatatctatcgacattctacgcacatgcagatggaacgaacataaag---- 708  Q
     ||| ||||||| |||||||||||||||||||||          |||||||| ||||| || |||||||||||||||| |||||| ||||| || |        
T  14013802 cattgaagagtgtttgaaattaaacaacacatta----------cataaaatctctattgatattctacgcacatgcaaatggaaagaacacaatgatat 14013713  T
Q  709 -atatattatcttcaaccatattctgaaacataaatcctacgt--ctatcgtcacgaataa 766  Q
     ||||||||||||||||||  |||  |||||||||| ||||||  ||||| ||||||||||    
T  14013712 aatatattatcttcaaccacgttcctaaacataaattctacgtcactatcatcacgaataa 14013652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 449 - 607
Target Start/End: Original strand, 6489471 - 6489629
Alignment:
Q  449 tttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaat 548  Q
    ||||||||  ||||| |||||||||||||||| |||||||| || ||||||| |||| | | ||||||||||||||||| ||||||| ||||||||||||    
T  6489471 tttttaccgctaattaaaccagagcatttccaaaggcaatataaatcatacaacattgaaactcggtcataaacaagaaaaatacattatcttttacaat 6489570  T
Q  549 tgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcat 607  Q
    || |  |||||||||||| || ||||||  || ||||||||| || |||||||||||||    
T  6489571 tgtccataattaaatcaaaccgacatttggttcaaattacacaaacgtttgaaattcat 6489629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 515 - 750
Target Start/End: Original strand, 35443315 - 35443553
Alignment:
Q  515 tcataaacaagaacaatacataatcttttacaattgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaata 614  Q
    ||||||||||||||||| |||||| ||| |||||||||   |||||||| |||   ||||||| |||||| ||||||||||||||||||||| |||||||    
T  35443315 tcataaacaagaacaatgcataatttttcacaattgaccaaaattaaattaatttgacatttcgttaaaa-tacacgaatgtttgaaattcaacaaaata 35443413  T
Q  615 ttaaagagtgcttgaaattaaacaacacattacatatcattacataaaatatctatcgacattctacgcacatgcagatggaacgaacataaag-----a 709  Q
     ||||||||| ||||||||||||||| ||| || ||  |||| || |||| | ||  |||||||| ||||| ||||| || || ||||| ||||     |    
T  35443414 -taaagagtgtttgaaattaaacaactcataacttaatattatatgaaatctttactgacattcttcgcacgtgcagttgaaatgaacacaaagatataa 35443512  T
Q  710 tatattatcttcaaccatattctgaaacataaatcctacgt 750  Q
    |||||||| ||||||||||| |  |||||||||||||||||    
T  35443513 tatattattttcaaccatatgcctaaacataaatcctacgt 35443553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 457 - 612
Target Start/End: Original strand, 21951950 - 21952105
Alignment:
Q  457 tgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaattgactgta 556  Q
    ||||||| |||||||||||||||| | |||||| || ||||||| |||| | | |||  |||||||||||| ||||||  |||||||||||||| |  ||    
T  21951950 tgtaattaaaccagagcatttccaaatgcaatataaatcatacaacattgaaactcgaacataaacaagaaaaatacaatatcttttacaattgtccata 21952049  T
Q  557 attaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaa 612  Q
    |||||||||| || |||||| ||||||||||||| || ||||||||||||||||||    
T  21952050 attaaatcaaaccgacatttgattaaaattacacaaacgtttgaaattcatcaaaa 21952105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 431 - 609
Target Start/End: Complemental strand, 600493 - 600314
Alignment:
Q  431 caagccattttttg-cctatttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaaca 529  Q
    |||||||||||| | || |||||||||||||||| |||||||||||||  | |||||| | || ||||||| |||| | | |||| |||||||||||| |    
T  600493 caagccatttttcggccaatttttacctgtaattaaaccagagcatttttaaaggcaaaataattcatacaacattgaaactcggacataaacaagaaaa 600394  T
Q  530 atacataatcttttacaattgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatca 609  Q
    |||||  |||||||||||||| |  |||||||||||| || ||||||  || ||||||||| || |||||||||||||||    
T  600393 atacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaacgtttgaaattcatca 600314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 449 - 617
Target Start/End: Complemental strand, 4002435 - 4002267
Alignment:
Q  449 tttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaat 548  Q
    ||||||||||||||| |||||||||||||||| |||||| | || |||||||  ||| | | |||| |||||||||||  ||||||  ||||||||||||    
T  4002435 tttttacctgtaattaaaccagagcatttccaaaggcaaaataattcatacaagattgaaactcggacataaacaagataaatacaatatcttttacaat 4002336  T
Q  549 tgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaatatta 617  Q
    || |  ||||||||| || || ||||||  ||||||||| || || |||||||||||||||||| ||||    
T  4002335 tgtccataattaaattaaaccgacatttggttaaaattaaacaaacgtttgaaattcatcaaaacatta 4002267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 449 - 609
Target Start/End: Complemental strand, 42166342 - 42166182
Alignment:
Q  449 tttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaat 548  Q
    ||||||||||||||| |||||||||||||  | |||||| |||| ||||||| |||| | | |||| |||||||||||  ||||||  ||||||||||||    
T  42166342 tttttacctgtaattaaaccagagcattttgaaaggcaaaacaattcatacaacattgaaactcggacataaacaagataaatacaatatcttttacaat 42166243  T
Q  549 tgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatca 609  Q
    || |  |||||||||||| || ||||||  || ||||||||| ||||||||||||| ||||    
T  42166242 tgtccataattaaatcaaaccgacatttggttcaaattacactaatgtttgaaatttatca 42166182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 431 - 751
Target Start/End: Original strand, 9426728 - 9427055
Alignment:
Q  431 caagccatttttt--gcctatttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaac 528  Q
    |||||||||||||  |||  ||||||||||||||| |||||||||||||||| |||||| | || |||||||  ||| | | |||| |||||  ||||      
T  9426728 caagccattttttcggccagtttttacctgtaattaaaccagagcatttccaaaggcaaaataattcatacaagattgaaactcggacataatgaagata 9426827  T
Q  529 aatacataatcttttacaattgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaatattaaagagtgcttg 628  Q
    | ||||  ||||||||||||||    ||||||||| || || ||||||  ||||||||| || || |||||||||||||||||| |||| | ||||        
T  9426828 agtacaatatcttttacaattgttcataattaaattaaaccgacatttggttaaaattaaacaaacgtttgaaattcatcaaaacattacaaagtgtcca 9426927  T
Q  629 aaattaaacaacacattacatatcattacataaaatatctatcgacattctacgcacatgcagatggaacgaacata-----aagatatattatcttcaa 723  Q
     |||||||| || ||||||| ||||||| || ||||  |||   |||||| |||||  | || ||||||||||||||     |  ||||||||||||| |    
T  9426928 taattaaactactcattacacatcattaaattaaatccctacttacattcaacgcaattacatatggaacgaacatacatatataatatattatcttcca 9427027  T
Q  724 ccatattctgaaacataaatcctacgtc 751  Q
    |||||||| ||||||||||||| |||||    
T  9427028 ccatattccgaaacataaatccgacgtc 9427055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 449 - 744
Target Start/End: Original strand, 48246554 - 48246854
Alignment:
Q  449 tttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaat 548  Q
    ||||||||||||||| ||||||||||||| || |||||| | || ||||| | |||| | | || | ||||| ||| |  ||||||  ||||||||||||    
T  48246554 tttttacctgtaattaaaccagagcattttcaaaggcaaaataattcataaaacattgaaactcagacataagcaatataaatacaatatcttttacaat 48246653  T
Q  549 tgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaatattaaagagtgcttgaaattaaacaacacattaca 648  Q
    || |  ||||||||| || || ||||||  |||||||||||| ||  ||||||||||||||||| |||| | ||||     ||||||||||| |||||||    
T  48246654 tgtccataattaaattaaaccgacatttggttaaaattacacaaacttttgaaattcatcaaaaaattacaaagtgtccataattaaacaactcattaca 48246753  T
Q  649 tatcattacataaaatatctatcgacattctacgcacatgcagatggaacgaacata-----aagatatattatcttcaaccatattctgaaacataaat 743  Q
     ||||||| || ||||  |||   |||||| |||||  |||| ||||||| ||||||     |  ||||||||||||| ||||||||| |||||||||||    
T  48246754 catcattaaattaaatccctacttacattcaacgcagttgcatatggaacaaacatacatatataatatattatcttccaccatattccgaaacataaat 48246853  T
Q  744 c 744  Q
    |    
T  48246854 c 48246854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 449 - 609
Target Start/End: Original strand, 50213600 - 50213760
Alignment:
Q  449 tttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaat 548  Q
    ||||||||||||||| || ||||||||||| | |||||| | || ||||||| |||| | | |||| |||||||||||| ||| ||  ||||||||||||    
T  50213600 tttttacctgtaattaaagcagagcatttcgaaaggcaaaataattcatacaacattgaaactcggacataaacaagaaaaatgcaatatcttttacaat 50213699  T
Q  549 tgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatca 609  Q
    || |  |||||||||||| || ||||||  || ||||||||| || |||||||||||||||    
T  50213700 tgtccataattaaatcaaaccgacatttggttcaaattacacaaacgtttgaaattcatca 50213760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 449 - 612
Target Start/End: Original strand, 7841238 - 7841401
Alignment:
Q  449 tttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaat 548  Q
    ||||||||||||||| |||||||||||||||| |||||| | || ||||||| |||| | | || | |||||||||||  ||||||  ||||||||||||    
T  7841238 tttttacctgtaattaaaccagagcatttccaaaggcaaaataattcatacaacattgaaactcagacataaacaagataaatacagtatcttttacaat 7841337  T
Q  549 tgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaa 612  Q
    || |  ||| ||||| || || ||||||  |||||||||||| || |||| |||||||||||||    
T  7841338 tgtccataagtaaattaaaccgacatttggttaaaattacacaaacgtttaaaattcatcaaaa 7841401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 431 - 609
Target Start/End: Original strand, 47070592 - 47070771
Alignment:
Q  431 caagccattttttgccta-tttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaaca 529  Q
    |||||||||||| | ||| ||||||||||||||| |||||||||||||| | |||||| |||| ||||||| |||| | | |||  |||||||||||  |    
T  47070592 caagccatttttcggctagtttttacctgtaattaaaccagagcatttcgaaaggcaaaacaattcatacaacattgaaactcgaacataaacaagataa 47070691  T
Q  530 atacataatcttttacaattgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatca 609  Q
    |||||  ||||||| |||||| |  |||||||||||| || || |||  || ||||||||| || |||||||||||||||    
T  47070692 atacaatatcttttccaattgtccataattaaatcaaaccgacgtttggttcaaattacacaaacgtttgaaattcatca 47070771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 449 - 604
Target Start/End: Original strand, 52387942 - 52388097
Alignment:
Q  449 tttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaat 548  Q
    ||||||||||||||| |||||||||||||| | ||||||  ||| ||||||| |||| | | |||| ||||||||| |  ||||||  ||||||||||||    
T  52387942 tttttacctgtaattaaaccagagcatttcgaaaggcaaaccaattcatacaacattgaaactcggacataaacaatataaatacaatatcttttacaat 52388041  T
Q  549 tgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaatt 604  Q
    ||||  |||||||||||| || ||||||  || ||||||||| || ||||||||||    
T  52388042 tgaccataattaaatcaaaccgacattttgttcaaattacacaaacgtttgaaatt 52388097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 449 - 609
Target Start/End: Complemental strand, 36134213 - 36134053
Alignment:
Q  449 tttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaat 548  Q
    ||||||||||||||| || ||||||||||| | |||||| | || ||||||| |||| | | |||| |||||||||||  ||||||  ||||||||||||    
T  36134213 tttttacctgtaattaaatcagagcatttcgaaaggcaaaataattcatacaacattgaaactcggacataaacaagataaatacaatatcttttacaat 36134114  T
Q  549 tgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatca 609  Q
    || |  |||||||||||| || ||||||  || ||||||||| || |||| ||||||||||    
T  36134113 tgtccataattaaatcaaaccgacatttggttcaaattacacaaacgtttaaaattcatca 36134053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 449 - 612
Target Start/End: Original strand, 67016 - 67179
Alignment:
Q  449 tttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaat 548  Q
    ||||||||||||||| |||||||||| | ||| | |||||| || ||||||| |||||| | ||  | ||||||||| | ||||||  ||||||||||||    
T  67016 tttttacctgtaattaaaccagagcaatcccaaatgcaatataattcatacaacatttaaactcacttataaacaagtaaaatacaatatcttttacaat 67115  T
Q  549 tgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaa 612  Q
    || |  |||||||||||| || ||||||  || ||| ||||| || ||||||||||||||||||    
T  67116 tgtccataattaaatcaaaccgacatttggttcaaactacacaaaagtttgaaattcatcaaaa 67179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 449 - 609
Target Start/End: Original strand, 2271497 - 2271658
Alignment:
Q  449 tttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaaga-acaatacataatcttttacaa 547  Q
    ||||||||||||||| |||||||||||||| | |||||| |||| ||||||| |||| | | | || ||||||||||| | ||||||  |||||||||||    
T  2271497 tttttacctgtaattaaaccagagcatttcgaaaggcaaaacaattcatacaacattgaaacttggacataaacaagataaaatacaatatcttttacaa 2271596  T
Q  548 ttgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatca 609  Q
    ||| |  |||||||||||| || ||||||  || |||||| || || |||| ||||||||||    
T  2271597 ttgtccataattaaatcaaaccgacatttggttcaaattagacaaacgtttaaaattcatca 2271658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 431 - 750
Target Start/End: Complemental strand, 6745276 - 6744950
Alignment:
Q  431 caagccatttttt--gcctatttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaac 528  Q
    |||||||||||||  |||  ||||||||||||||| |||||||||||||||| ||| |||| || |||||||  ||| | | |||| |||||  ||||      
T  6745276 caagccattttttcggccagtttttacctgtaattaaaccagagcatttccaaaggtaatataattcatacaagattgaaactcggacataatgaagata 6745177  T
Q  529 aatacataatcttttacaattgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaatattaaagagtgcttg 628  Q
    ||||||  ||||||||||||||    ||||||||| || || ||||||  ||||||||| ||  | |||||||||||||||||| |||| | ||||        
T  6745176 aatacaatatcttttacaattgttcataattaaattaaaccgacatttggttaaaattaaacagacgtttgaaattcatcaaaacattacaaagtgtcca 6745077  T
Q  629 aaattaaacaacacattacatatcattacataaaatatctatcgacattctacgcacatgcagatggaacgaacata-----aagatatattatcttcaa 723  Q
     |||||||| || ||||||| ||||||| || ||||  |||   |||||| | |||  | || ||||||||||||||     |  ||||||| ||||| |    
T  6745076 taattaaactactcattacacatcattaaattaaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatattgtcttcca 6744977  T
Q  724 ccatattctgaaacataaatcctacgt 750  Q
    |||||||| ||||||||||||| ||||    
T  6744976 ccatattccgaaacataaatccgacgt 6744950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 449 - 607
Target Start/End: Complemental strand, 9473879 - 9473721
Alignment:
Q  449 tttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaat 548  Q
    ||||||||||||||| ||||||| |||||| | |||||| |||| ||||||| |||| | | |||| ||||||||| |  ||||||  |||| |||||||    
T  9473879 tttttacctgtaattaaaccagatcatttcgaaaggcaaaacaattcatacaacattgaaactcggacataaacaatataaatacaatatctattacaat 9473780  T
Q  549 tgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcat 607  Q
    |  |  |||||||||||| || ||||||  || || |||||| || |||||||||||||    
T  9473779 tatccataattaaatcaaaccgacatttggttcaagttacacaaacgtttgaaattcat 9473721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 449 - 563
Target Start/End: Complemental strand, 14402927 - 14402813
Alignment:
Q  449 tttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaat 548  Q
    ||||||||||||||| |||||||||||||||| |||||| | || |||||||  ||| | | |||| |||||||||||  ||||||  ||||||||||||    
T  14402927 tttttacctgtaattaaaccagagcatttccaaaggcaaaataattcatacaagattgaaactcggacataaacaagataaatacaatatcttttacaat 14402828  T
Q  549 tgactgtaattaaat 563  Q
    || |  |||||||||    
T  14402827 tgtccataattaaat 14402813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 448 - 609
Target Start/End: Complemental strand, 16647104 - 16646944
Alignment:
Q  448 atttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaa 547  Q
    ||||||| |||||||| |||||||||||||| | |||||| |||| ||||||| |||| | | || | |||||| ||||  |||| |  ||||||||| |    
T  16647104 atttttatctgtaattaaaccagagcatttcgaaaggcaaaacaattcatacaacattgaaactcagacataaa-aagataaatataatatcttttacga 16647006  T
Q  548 ttgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatca 609  Q
    ||| |  |||||||||||| || ||||||  || ||||||||| || |||||||||||||||    
T  16647005 ttgtccataattaaatcaaaccgacatttggtttaaattacacaaacgtttgaaattcatca 16646944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 431 - 617
Target Start/End: Original strand, 36812960 - 36813148
Alignment:
Q  431 caagccatttttt--gcctatttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaac 528  Q
    |||||||||||||  |||  |||||||||||| || |||||||||||||||| |||||| | ||  ||||||  ||| | | |||| |||||||||||      
T  36812960 caagccattttttcggccagtttttacctgtagttaaaccagagcatttccaaaggcaaaataatccatacaagattgaaactcggacataaacaagata 36813059  T
Q  529 aatacataatcttttacaattgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaatatta 617  Q
    ||||||  ||||| ||||||||    ||||||||| || || ||||||  ||||||||| || || ||||||||||||| |||| ||||    
T  36813060 aatacaatatcttatacaattgttcataattaaattaaaccgacatttggttaaaattaaacaaacgtttgaaattcattaaaacatta 36813148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 431 - 751
Target Start/End: Original strand, 13743390 - 13743716
Alignment:
Q  431 caagccatttttt--gcctatttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaac 528  Q
    |||||||||||||  |||  ||||||||||||||| ||| |||||||||||| |||||| | || |||||||  ||| | | |||| ||||| |||||      
T  13743390 caagccattttttcggccagtttttacctgtaattaaactagagcatttccaaaggcaaaataattcatacaagattgaaactcggacataatcaagata 13743489  T
Q  529 aatacataatcttttacaattgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaatattaaagagtgcttg 628  Q
    | ||||  ||||||||||||||    ||||||||| || || ||||||  || |||||| || || |||||||||||||||||| |||| | ||||        
T  13743490 agtacaatatcttttacaattgttcataattaaattaaaccgacatttggtt-aaattaaacaaacgtttgaaattcatcaaaacattacaaagtgtcca 13743588  T
Q  629 aaattaaacaacacattacatatcattacataaaatatctatcgacattctacgcacatgcagatggaacgaacata-----aagatatattatcttcaa 723  Q
     |||||||| || ||||||| ||||||| || ||||  |||   |||||| | |||  | || ||||||||||||||     |  ||||||| ||||| |    
T  13743589 taattaaactactcattacacatcattaaattaaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatattgtcttcca 13743688  T
Q  724 ccatattctgaaacataaatcctacgtc 751  Q
    |||||||| ||||||||||||| |||||    
T  13743689 ccatattccgaaacataaatccgacgtc 13743716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 431 - 608
Target Start/End: Complemental strand, 2857932 - 2857753
Alignment:
Q  431 caagccatttttt--gcctatttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaac 528  Q
    |||||||||||||  |||  ||||||||||||||| |||||||||||||||| |||||| | || |||||||  ||| | | | || |||||  ||||      
T  2857932 caagccattttttcggccagtttttacctgtaattaaaccagagcatttccaaaggcaaaataattcatacaagattgaaacttggacataatgaagata 2857833  T
Q  529 aatacataatcttttacaattgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatc 608  Q
    | ||||  ||||||||||||||    ||||||||| || || ||||||  ||||||||| || || ||||||||||||||    
T  2857832 agtacaatatcttttacaattgttcataattaaattaaaccgacatttggttaaaattaaacaaacgtttgaaattcatc 2857753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 431 - 612
Target Start/End: Original strand, 46989635 - 46989818
Alignment:
Q  431 caagccatttttt--gcctatttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaac 528  Q
    |||||||||||||  |||  ||||||||||||||| ||||| || |||| || |||||| | || |||||||    | | | |||| |||||||||||      
T  46989635 caagccattttttcggccagtttttacctgtaattaaaccaaagtattttcaaaggcaaaataattcatacaaatgtgaaactcggacataaacaagata 46989734  T
Q  529 aatacataatcttttacaattgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaa 612  Q
    ||||||  |||||||||||||| |  ||||||||| || || ||||||  || ||||||||| ||  |||||||||||||||||    
T  46989735 aatacaatatcttttacaattgtccataattaaattaaaccgacatttggttcaaattacacaaacatttgaaattcatcaaaa 46989818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 530 - 612
Target Start/End: Complemental strand, 9440492 - 9440410
Alignment:
Q  530 atacataatcttttacaattgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaa 612  Q
    ||||||||||||| |||||||||    ||||||||||| | ||||| | ||||||||||| || ||||||||||||| |||||    
T  9440492 atacataatctttcacaattgaccaagattaaatcaattcgacattacgttaaaattacatgattgtttgaaattcaacaaaa 9440410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 449 - 750
Target Start/End: Complemental strand, 3953146 - 3952838
Alignment:
Q  449 tttttacctgtaattcaaccagagcatttccagaggcaatacaactcata--catcatttacaatcggtcataaacaagaacaatacataatcttttaca 546  Q
    ||||||||||||||| |||||||||||||||| ||| |||| || |||||   || ||| | | |||| |||||  ||||  ||||||  ||||||||||    
T  3953146 tttttacctgtaattaaaccagagcatttccaaaggtaatataattcatatgtatgattgaaactcggacataatgaagataaatacaatatcttttaca 3953047  T
Q  547 attgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaatattaaagagtgcttgaaattaaacaacacatta 646  Q
    ||||    ||||||||| || || ||||||  ||||||||| |   | |||||||||||||||||| |||| | ||||     |||||||| || |||||    
T  3953046 attgttcataattaaattaaaccgacatttggttaaaattaaatagacgtttgaaattcatcaaaacattacaaagtgtccataattaaactactcatta 3952947  T
Q  647 catatcattacataaaatatctatcgacattctacgcacatgcagatggaacgaacata-----aagatatattatcttcaaccatattctgaaacataa 741  Q
    || ||||||| || ||||  |||   |||||| | |||  | || ||||||||||||||     |  ||||||| ||||| ||||||||| |||||||||    
T  3952946 cacatcattaaattaaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatattgtcttccaccatattccgaaacataa 3952847  T
Q  742 atcctacgt 750  Q
    |||| ||||    
T  3952846 atccgacgt 3952838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 630 - 771
Target Start/End: Original strand, 6489667 - 6489815
Alignment:
Q  630 aattaaacaacacattacatatcattacataaaatatctatcgacattctacgcacatgcagatggaacgaacataaagatat-----attatcttcaac 724  Q
    ||||||||||| ||||||| ||||||| || ||||  |||   |||||| || ||  |||| |||||||||||||| | ||||     ||||||||| ||    
T  6489667 aattaaacaactcattacacatcattaaattaaattcctacttacattcaacacaattgcatatggaacgaacatacatatataatatattatcttccac 6489766  T
Q  725 catattctgaaacataaatcctacg--tctatcgtcacgaataagccaa 771  Q
    ||||||| |||| |||||||| |||   |||||||||||||||||||||    
T  6489767 catattccgaaatataaatccgacgacgctatcgtcacgaataagccaa 6489815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 709 - 751
Target Start/End: Original strand, 2743863 - 2743905
Alignment:
Q  709 atatattatcttcaaccatattctgaaacataaatcctacgtc 751  Q
    ||||||||||||| ||||||||| ||||||||||||| |||||    
T  2743863 atatattatcttccaccatattccgaaacataaatccgacgtc 2743905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 556 - 606
Target Start/End: Original strand, 39964665 - 39964715
Alignment:
Q  556 aattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattca 606  Q
    ||||||||| || | ||||||| ||||||||||| ||||||||||||||||    
T  39964665 aattaaatctattcgacatttcgttaaaattacatgaatgtttgaaattca 39964715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 709 - 771
Target Start/End: Original strand, 46989934 - 46989998
Alignment:
Q  709 atatattatcttcaaccatattctgaaacataaatcctacgtc--tatcgtcacgaataagccaa 771  Q
    ||||||||||||| |||||||||  |||||||||||| |||||   |||||| ||||||||||||    
T  46989934 atatattatcttccaccatattccaaaacataaatccgacgtcgtcatcgtcgcgaataagccaa 46989998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 83; Significance: 7e-39; HSPs: 21)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 449 - 771
Target Start/End: Original strand, 34622641 - 34622970
Alignment:
Q  449 tttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaat 548  Q
    ||||||| ||||||| |||||||||||||||| |||||||| || ||||||| |||| | | ||||||||||| ||||| ||||||  || |||||||||    
T  34622641 tttttacatgtaattaaaccagagcatttccaaaggcaatataaatcatacaacattgaaactcggtcataaataagaaaaatacaatatattttacaat 34622740  T
Q  549 tgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaatattaaagagtgcttgaaattaaacaacacattaca 648  Q
    || |  |||||||||||| || ||||||  || ||||||||| || ||||||||||||||||||  ||| | ||||     ||||||||||| |||||||    
T  34622741 tgtccataattaaatcaaaccgacatttggttcaaattacacaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaaacaactcattaca 34622840  T
Q  649 tatcattacataaaatatctatcgacattctacgcacatgcagatggaacgaacata-----aagatatattatcttcaaccatattctgaaacataaat 743  Q
     ||||||| || |||  ||||   |||||| |||||  |||| ||| ||||||||||     |  ||||||||||||| | ||||||| |||||||||||    
T  34622841 catcattaaattaaacttctacttacattcaacgcaattgcatatgaaacgaacatacatatataatatattatcttccatcatattccgaaacataaat 34622940  T
Q  744 cctacgt--ctatcgtcacgaataagccaa 771  Q
    || ||||  |||||||| ||||||||||||    
T  34622941 ccgacgtcgctatcgtcgcgaataagccaa 34622970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 476 - 713
Target Start/End: Original strand, 5731819 - 5732055
Alignment:
Q  476 ttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaattgactgtaattaaatcaatccaacatt 575  Q
    ||||||||||| |||||||| ||||||| |||||| | ||||||| | ||||||||||||||||| | ||||||||    |||||||| |||    ||||    
T  5731819 ttccagaggcagtacaactcgtacatcaattacaaccagtcataagccagaacaatacataatctatcacaattgatcaaaattaaataaatttggcatt 5731918  T
Q  576 tcattaaaattacacgaatgtttgaaattcatcaaaatattaaagagtgcttgaaattaaacaacacattacatatcattacataaaatatctatcgaca 675  Q
    || |||| |||||||||| |||| ||||||| ||||| || ||| |||| ||||||||  ||||||||||||||| |||||||| |||| ||||| || |    
T  5731919 tcgttaatattacacgaacgttttaaattcaacaaaacat-aaatagtgtttgaaattggacaacacattacataacattacatgaaatctctattgaaa 5732017  T
Q  676 ttctacgcacatgcagatggaacgaacataaagatata 713  Q
    |||| ||||||||||| | ||||||||| |||||||||    
T  5732018 ttctccgcacatgcagtttgaacgaacacaaagatata 5732055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 431 - 617
Target Start/End: Original strand, 19044416 - 19044603
Alignment:
Q  431 caagccattttttgccta-tttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaaca 529  Q
    |||||||||||| | ||| ||||||||||||||| |||||||| ||||||| |||||||| || ||||||| |||| | | | |||||||| |||||| |    
T  19044416 caagccatttttcggctagtttttacctgtaattaaaccagagaatttccaaaggcaatataaatcatacaacattgaaattgggtcataaccaagaaaa 19044515  T
Q  530 atacataatcttttacaattgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaatatta 617  Q
    |||||  |||||||||| ||| |  |||||||||||| || ||||||  || ||||||||| || |||||||||||||||||| ||||    
T  19044516 atacaatatcttttacagttgtccataattaaatcaaaccgacatttggttcaaattacacaaacgtttgaaattcatcaaaacatta 19044603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 431 - 617
Target Start/End: Complemental strand, 20710220 - 20710033
Alignment:
Q  431 caagccattttttgccta-tttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaaca 529  Q
    |||||||||||| | ||| ||||||||||||||| |||||||| ||||||| |||||||| || ||||||| |||| | | | |||||||| |||||| |    
T  20710220 caagccatttttcggctagtttttacctgtaattaaaccagagaatttccaaaggcaatataaatcatacaacattgaaattgggtcataaccaagaaaa 20710121  T
Q  530 atacataatcttttacaattgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaatatta 617  Q
    |||||  |||||||||| ||| |  |||||||||||| || ||||||  || ||||||||| || |||||||||||||||||| ||||    
T  20710120 atacaatatcttttacagttgtccataattaaatcaaaccgacatttggttcaaattacacaaacgtttgaaattcatcaaaacatta 20710033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 431 - 771
Target Start/End: Complemental strand, 47742939 - 47742590
Alignment:
Q  431 caagccatttttt--gcctatttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaac 528  Q
    |||||||||||||  |||  ||||||||||||||| ||||||||||||| || |||||| | || ||||||| |||| | |   || || ||||||||      
T  47742939 caagccatttttttggccagtttttacctgtaattaaaccagagcattttcaaaggcaaaataattcatacaacattgaaacatggacaaaaacaagata 47742840  T
Q  529 aatacataatcttttacaattgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaatattaaagagtgcttg 628  Q
    ||| ||  |||||||||||||| |  ||||||||| || |||||||||  || ||||||||| || ||||||||||||||||||  ||| | ||||        
T  47742839 aatgcaatatcttttacaattgtccataattaaattaaaccaacatttggttcaaattacacaaacgtttgaaattcatcaaaacgttacaaagtgtcca 47742740  T
Q  629 aaattaaacaacacattacatatcattacataaaatatctatcgacattctacgcacatgcagatggaacgaacata-----aagatatattatcttcaa 723  Q
     ||||||||||| ||||||| ||||||| || ||||  |||   |||||| |||||  |||| ||||||||||||||     |  ||||||||||||| |    
T  47742739 taattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttcca 47742640  T
Q  724 ccatattctgaaacataaatcctacgt--ctatcgtcacgaataagccaa 771  Q
    |||||||| ||||||||||||| ||||  | |||||| ||||||||||||    
T  47742639 ccatattccgaaacataaatccgacgtcgccatcgtcgcgaataagccaa 47742590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 449 - 751
Target Start/End: Complemental strand, 18109724 - 18109416
Alignment:
Q  449 tttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaat 548  Q
    |||||| |||||||| |||||||||||||||| |||||| | || |||||||  ||| | | |||||||||| |||||  ||||||  ||||||||||||    
T  18109724 tttttatctgtaattaaaccagagcatttccaaaggcaaaataattcatacaagattgaaactcggtcataatcaagataaatacaatatcttttacaat 18109625  T
Q  549 tgactgtaattaaatcaatccaaca-tttcattaaaattacacgaatgtttgaaattcatcaaaatattaaagagtgcttgaaattaaacaacacattac 647  Q
    ||    ||||||||| || || ||| |||  ||||||||| || || |||||||||||||||||| |||| | ||||     |||||||| || ||||||    
T  18109624 tgttcataattaaattaaaccgacattttggttaaaattaaacaaacgtttgaaattcatcaaaacattacaaagtgtccataattaaactactcattac 18109525  T
Q  648 atatcattacataaaatatctatcgacattctacgcacatgcagatggaacgaacata-----aagatatattatcttcaaccatattctgaaacataaa 742  Q
    | ||||||| || ||||  |||   |||||| |||||  |||| ||||||||||||||     |  ||||||||||||| ||||||||| ||||||||||    
T  18109524 acatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattccgaaacataaa 18109425  T
Q  743 tcctacgtc 751  Q
    ||| |||||    
T  18109424 tccgacgtc 18109416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 448 - 658
Target Start/End: Original strand, 10705389 - 10705599
Alignment:
Q  448 atttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaa 547  Q
    |||||||| ||||||| ||||| |||||||| | |||||||| |||| ||||| |||||| | || |||||||||||| | ||||||  |||||||||||    
T  10705389 atttttacatgtaatttaaccaaagcatttctaaaggcaatataacttatacaacatttaaactcagtcataaacaagtaaaatacaatatcttttacaa 10705488  T
Q  548 ttgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaatattaaagagtgcttgaaattaaacaacacattac 647  Q
    ||| |  |||||||||||| || ||||||  || ||| ||||| || |||| |||||||||||||| ||| | ||||     |||||||||| |||||||    
T  10705489 ttgtccataattaaatcaaaccgacatttggttcaaaatacacaaaagtttaaaattcatcaaaatgttacatagtgtccataattaaacaatacattac 10705588  T
Q  648 atatcattaca 658  Q
    |  ||||||||    
T  10705589 aactcattaca 10705599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 431 - 751
Target Start/End: Complemental strand, 15070301 - 15069973
Alignment:
Q  431 caagccatttttt--gcctatttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaac 528  Q
    |||||||||||||  |||  ||||||||||||| | |||||||||||||||| |||| | | || |||||||  ||| | | |||||||||| |||||      
T  15070301 caagccattttttcggccagtttttacctgtaaataaaccagagcatttccaaaggctaaataattcatacaagattgaaactcggtcataatcaagata 15070202  T
Q  529 aatacataatcttttacaattgactgtaattaaatcaatccaaca-tttcattaaaattacacgaatgtttgaaattcatcaaaatattaaagagtgctt 627  Q
    ||||||  ||||||||||||||    ||||||||| || || ||| |||  ||||||||| || || |||||||||||||||||| |||| | ||||       
T  15070201 aatacaatatcttttacaattgttcataattaaattaaaccgacattttggttaaaattaaacaaacgtttgaaattcatcaaaacattacaaagtgtcc 15070102  T
Q  628 gaaattaaacaacacattacatatcattacataaaatatctatcgacattctacgcacatgcagatggaacgaacata-----aagatatattatcttca 722  Q
      |||||||| || ||||||| ||||||| || ||||  |||   |||||| |||||  |||| ||||||||||||||     |  |||||||||||||     
T  15070101 ataattaaactactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttcc 15070002  T
Q  723 accatattctgaaacataaatcctacgtc 751  Q
    ||||||||| ||||||||||||| |||||    
T  15070001 accatattccgaaacataaatccgacgtc 15069973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 431 - 617
Target Start/End: Complemental strand, 40928903 - 40928715
Alignment:
Q  431 caagccatttttt--gcctatttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaac 528  Q
    |||||||||||||  |||  ||||||||||||||| |||||||||||||||| |||||| | || |||||||  ||| | | |||||||||| |||||      
T  40928903 caagccattttttcggccagtttttacctgtaattaaaccagagcatttccaaaggcaaaataattcatacaagattgaaactcggtcataatcaagata 40928804  T
Q  529 aatacataatcttttacaattgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaatatta 617  Q
    ||||||  ||||||||||||||    ||||||||| || || ||||||  ||||||||| || || |||||||||||||||||| ||||    
T  40928803 aatacaatatcttttacaattgttcataattaaattaaaccgacatttggttaaaattaaacaaacgtttgaaattcatcaaaacatta 40928715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 451 - 609
Target Start/End: Complemental strand, 17838563 - 17838405
Alignment:
Q  451 tttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaattg 550  Q
    ||||| ||||||| |||||||||||||| | |||||| |||| ||||||| |||| | | |||| |||||||||||  ||||||  ||||||||||||||    
T  17838563 tttacttgtaattaaaccagagcatttcgaaaggcaaaacaattcatacaacattgaaactcggacataaacaagataaatacaatatcttttacaattg 17838464  T
Q  551 actgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatca 609  Q
     |  |||||||||||| || ||||||  || ||||||||| || |||| ||||||||||    
T  17838463 tccataattaaatcaaaccgacatttggttcaaattacacaaacgtttaaaattcatca 17838405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 449 - 607
Target Start/End: Complemental strand, 34742325 - 34742168
Alignment:
Q  449 tttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaat 548  Q
    ||||||||||||||| ||  |||||||||| | |||||| | || ||||||| |||| | | |||| |||||||||||| ||||||  ||||||||||||    
T  34742325 tttttacctgtaattaaagtagagcatttcgaaaggcaaaa-aattcatacaacattgaaactcggacataaacaagaaaaatacaatatcttttacaat 34742227  T
Q  549 tgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcat 607  Q
    || |  ||||||||||||  | |||||| ||| ||||||||| || |||||||||||||    
T  34742226 tgtccataattaaatcaaatcgacatttgattcaaattacacaaacgtttgaaattcat 34742168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 449 - 751
Target Start/End: Complemental strand, 42503769 - 42503461
Alignment:
Q  449 tttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaat 548  Q
    ||||||||||||||| ||||||||||| |||| |||| | | || |||| ||  ||| | | |||||||||| |||||  ||||||  |||||||| |||    
T  42503769 tttttacctgtaattaaaccagagcatctccaaaggctaaataattcatgcaagattgaaactcggtcataatcaagataaatacaatatcttttataat 42503670  T
Q  549 tgactgtaattaaatcaatccaaca-tttcattaaaattacacgaatgtttgaaattcatcaaaatattaaagagtgcttgaaattaaacaacacattac 647  Q
    ||    | ||||||| || |||||| |||  ||||||||| || || |||||||||||||||||| |||| | ||||     |||||||| || ||||||    
T  42503669 tgttcatgattaaattaaaccaacattttggttaaaattaaacaaacgtttgaaattcatcaaaacattacaaagtgtccataattaaactactcattac 42503570  T
Q  648 atatcattacataaaatatctatcgacattctacgcacatgcagatggaacgaacata-----aagatatattatcttcaaccatattctgaaacataaa 742  Q
    | ||||||| || ||||  |||   |||||| || ||  |||| ||||||||||||||     |  ||||||||||||| ||||||||| ||||||||||    
T  42503569 acatcattaaattaaatccctacttacattcaacacaattgcatatggaacgaacatacatatataatatattatcttccaccatattccgaaacataaa 42503470  T
Q  743 tcctacgtc 751  Q
    ||| |||||    
T  42503469 tccgacgtc 42503461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 485 - 612
Target Start/End: Original strand, 12111394 - 12111521
Alignment:
Q  485 caatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaattgactgtaattaaatcaatccaacatttcattaaaa 584  Q
    ||||| || ||||||| |||| | | ||||||||||||||||| ||||||  |||||||| ||||| |  |||||||||||| || ||||||  || |||    
T  12111394 caatataaatcatacaacattgaaactcggtcataaacaagaaaaatacaatatcttttataattgtccataattaaatcaaaccgacatttggttcaaa 12111493  T
Q  585 ttacacgaatgtttgaaattcatcaaaa 612  Q
    |||||| || |||| |||||||||||||    
T  12111494 ttacaccaaagtttaaaattcatcaaaa 12111521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 431 - 751
Target Start/End: Original strand, 603902 - 604229
Alignment:
Q  431 caagccatttttt--gcctatttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaac 528  Q
    |||||||||||||  |||  ||||||||||||||| ||||||| |||||||| ||| || | || |||||||  ||| | | |||  |||||  ||||      
T  603902 caagccattttttcggccagtttttacctgtaattaaaccagaacatttccaaaggtaaaataattcatacaagattgaaactcgaacataatgaagata 604001  T
Q  529 aatacataatcttttacaattgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaatattaaagagtgcttg 628  Q
    ||||||  ||||||||||||||    ||||||||| ||  | ||||||  ||||||||| || || |||||||||||||||||| |||| | ||||        
T  604002 aatacaatatcttttacaattgttcataattaaattaaatcgacatttggttaaaattaaacaaacgtttgaaattcatcaaaacattacaaagtgtcca 604101  T
Q  629 aaattaaacaacacattacatatcattacataaaatatctatcgacattctacgcacatgcagatggaacgaacataaagatat-----attatcttcaa 723  Q
     |||||||| || ||||||| ||||||| || ||||  |||   |||||| |||||  | || ||||||| |||||| | ||||     ||||||||| |    
T  604102 taattaaactactcattacacatcattaaattaaatccctacttacattcaacgcaattacatatggaacaaacatacatatataatatattatcttcca 604201  T
Q  724 ccatattctgaaacataaatcctacgtc 751  Q
    |||||||| ||||||||||||| |||||    
T  604202 ccatattccgaaacataaatccgacgtc 604229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 449 - 604
Target Start/End: Original strand, 29592686 - 29592841
Alignment:
Q  449 tttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaat 548  Q
    ||||||||||||||| |||||||||||||||| ||| || | || |||||||  ||| | | |||| |||||||||||  ||||||  || |||||||||    
T  29592686 tttttacctgtaattaaaccagagcatttccaaaggaaaaataattcatacaagattgaaactcggacataaacaagataaatacaatattttttacaat 29592785  T
Q  549 tgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaatt 604  Q
    || |  ||||||||| || || ||||||  || ||||||||| ||  |||||||||    
T  29592786 tgtccataattaaattaaaccgacatttggttcaaattacacaaacttttgaaatt 29592841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 539 - 613
Target Start/End: Complemental strand, 47065148 - 47065074
Alignment:
Q  539 cttttacaattgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaat 613  Q
    |||||||||||| |  |||||||||||| || |||||| ||| ||||||||| || |||||||||||||||||||    
T  47065148 cttttacaattgtccataattaaatcaaaccgacatttgatttaaattacacaaaagtttgaaattcatcaaaat 47065074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 630 - 794
Target Start/End: Original strand, 19044630 - 19044801
Alignment:
Q  630 aattaaacaacacattacatatcattacataaaatatctatcgacattctacgcacatgcagatggaacgaacata-----aagatatattatcttcaac 724  Q
    ||||||||||  ||||||| ||||||| || |||| ||||   |||||| |||||  |||| ||||||||||||||     |  ||||||||||||| ||    
T  19044630 aattaaacaaatcattacacatcattaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccac 19044729  T
Q  725 catattctgaaacataaatcctacgt--ctatcgtcacgaataagccaatgcttataaatcaccgttttcca 794  Q
    ||||||  ||||||||||||  ||||  |||||||| |||||||||||| || ||||| |  ||||||||||    
T  19044730 catatttcgaaacataaatctgacgtcgctatcgtcgcgaataagccaaggcatataacttgccgttttcca 19044801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 630 - 794
Target Start/End: Complemental strand, 20710006 - 20709835
Alignment:
Q  630 aattaaacaacacattacatatcattacataaaatatctatcgacattctacgcacatgcagatggaacgaacata-----aagatatattatcttcaac 724  Q
    ||||||||||  ||||||| ||||||| || |||| ||||   |||||| |||||  |||| ||||||||||||||     |  ||||||||||||| ||    
T  20710006 aattaaacaaatcattacacatcattaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccac 20709907  T
Q  725 catattctgaaacataaatcctacgt--ctatcgtcacgaataagccaatgcttataaatcaccgttttcca 794  Q
    ||||||  ||||||||||||  ||||  |||||||| |||||||||||| || ||||| |  ||||||||||    
T  20709906 catatttcgaaacataaatctgacgtcgctatcgtcgcgaataagccaaggcatataacttgccgttttcca 20709835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 458 - 609
Target Start/End: Original strand, 5537996 - 5538147
Alignment:
Q  458 gtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaattgactgtaa 557  Q
    |||||| || ||||||||||| | ||| || | || ||||||| |||| | | |||| |||||||||||| |||| |  ||||| |||||||| |  |||    
T  5537996 gtaattaaagcagagcatttcgaaagggaaaataattcatacaacattgaaactcggacataaacaagaaaaataaaatatcttatacaattgtccataa 5538095  T
Q  558 ttaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatca 609  Q
    ||||||||| || ||||||  || |||||| || || |||||||||||||||    
T  5538096 ttaaatcaaaccgacatttggttcaaattatacaaacgtttgaaattcatca 5538147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 431 - 751
Target Start/End: Complemental strand, 30790958 - 30790629
Alignment:
Q  431 caagccatttttt--gcctatttttacctgtaattcaaccagagcatttccagaggcaatacaactcata--catcatttacaatcggtcataaacaaga 526  Q
    |||||||||||||  |||  ||||||||||||||| |||||||||||||||| ||| |||| || |||||   || ||| | | |||| |||||  ||||    
T  30790958 caagccattttttcggccattttttacctgtaattaaaccagagcatttccaaaggtaatataattcatatgtatgattgaaactcggacataatgaaga 30790859  T
Q  527 acaatacataatcttttacaattgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaatattaaagagtgct 626  Q
      |||| |  ||||||||||||||    ||||||||| || || ||||||  ||||||||| ||  | |||||||||||||||||| |||| | ||||      
T  30790858 taaatagaatatcttttacaattgttcataattaaattaaaccgacatttggttaaaattaaacagacgtttgaaattcatcaaaacattacaaagtgtc 30790759  T
Q  627 tgaaattaaacaacacattacatatcattacataaaatatctatcgacattctacgcacatgcagatggaacgaacata-----aagatatattatcttc 721  Q
       |||||||| || ||||||| ||||||| || ||||  |||   |||||| | |||  | || ||||||||||||||     |  ||||||| |||||    
T  30790758 cataattaaactactcattacacatcattaaattaaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatattgtcttc 30790659  T
Q  722 aaccatattctgaaacataaatcctacgtc 751  Q
     ||||||||| ||||||||||||| |||||    
T  30790658 caccatattccgaaacataaatccgacgtc 30790629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 712 - 794
Target Start/End: Original strand, 29592913 - 29592997
Alignment:
Q  712 tattatcttcaaccatattctgaaacataaatcctacgt--ctatcgtcacgaataagccaatgcttataaatcaccgttttcca 794  Q
    |||||||||| ||||||||| ||||||||||||  ||||  |||||||  |||||||||||| || ||||| |  ||||||||||    
T  29592913 tattatcttccaccatattccgaaacataaatctgacgtcgctatcgttgcgaataagccaaggcatataacttgccgttttcca 29592997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 76; Significance: 1e-34; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 449 - 612
Target Start/End: Complemental strand, 20041 - 19878
Alignment:
Q  449 tttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaat 548  Q
    ||||||||||||||| |||||||||||||||| |||||||| || ||||||| |||| | | ||||||||||||||||| ||||||  ||||||||||||    
T  20041 tttttacctgtaattaaaccagagcatttccaaaggcaatataaatcatacaacattgaaactcggtcataaacaagaaaaatacaatatcttttacaat 19942  T
Q  549 tgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaa 612  Q
    || |  |||||||||||| || ||||||  || ||||||||| || |||| |||||||||||||    
T  19941 tgtccataattaaatcaaaccgacatttggttcaaattacacaaacgtttaaaattcatcaaaa 19878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 73; Significance: 6e-33; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 449 - 744
Target Start/End: Complemental strand, 15885 - 15585
Alignment:
Q  449 tttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaat 548  Q
    ||||||||||||||| |||||||||||||||| |||||| | || |||||||  ||| | | |||| |||||||||||  ||||||  ||||||||||||    
T  15885 tttttacctgtaattaaaccagagcatttccaaaggcaaaataattcatacaagattgaaactcggacataaacaagataaatacaatatcttttacaat 15786  T
Q  549 tgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaatattaaagagtgcttgaaattaaacaacacattaca 648  Q
    || |  ||||||||| || || ||||||  ||||||||| || || |||||||||||||||||| |||| | ||||     ||||||||||| |||||||    
T  15785 tgtccataattaaattaaaccgacatttagttaaaattaaacaaacgtttgaaattcatcaaaacattacaaagtgtccataattaaacaactcattaca 15686  T
Q  649 tatcattacataaaatatctatcgacattctacgcacatgcagatggaacgaacata-----aagatatattatcttcaaccatattctgaaacataaat 743  Q
     ||||||| || ||||  |||   |||||| |||||  |||| ||||||||||||||     |  ||||||||| ||| ||||||||| |||||||||||    
T  15685 catcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattattttccaccatattccgaaacataaat 15586  T
Q  744 c 744  Q
    |    
T  15585 c 15585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0513 (Bit Score: 58; Significance: 6e-24; HSPs: 1)
Name: scaffold0513
Description:

Target: scaffold0513; HSP #1
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 431 - 705
Target Start/End: Original strand, 8322 - 8598
Alignment:
Q  431 caagccatttttt--gcctatttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaac 528  Q
    |||||||||||||  |||  ||||||||||||||| ||||| |||||||||| |||||| | || |||||||  ||| | | |||| ||||| |||||      
T  8322 caagccattttttcggccagtttttacctgtaattaaaccaaagcatttccaaaggcaaaataattcatacaagattgaaactcgggcataatcaagata 8421  T
Q  529 aatacataatcttttacaattgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaatattaaagagtgcttg 628  Q
    | ||||  ||||||||||||||    ||||||||| || |||||||||  ||||||||| || || |||||||||||||||||| |||| | ||||        
T  8422 agtacaatatcttttacaattgttcataattaaattaaaccaacatttggttaaaattaaacaaacgtttgaaattcatcaaaacattacaaagtgtcca 8521  T
Q  629 aaattaaacaacacattacatatcattacataaaatatctatcgacattctacgcacatgcagatggaacgaacata 705  Q
     ||||||||||| ||||||| ||||||| || ||||  |||   |||||| |||||  |||| ||||||||||||||    
T  8522 taattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacata 8598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494 (Bit Score: 58; Significance: 6e-24; HSPs: 1)
Name: scaffold0494
Description:

Target: scaffold0494; HSP #1
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 431 - 751
Target Start/End: Complemental strand, 5277 - 4949
Alignment:
Q  431 caagccatttttt--gcctatttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaac 528  Q
    |||||||||||||  |||  ||||||||||||||| |||||||||||||||| |||| | | || |||||||  ||| | | |||||||||| |||||      
T  5277 caagccattttttcggccagtttttacctgtaattaaaccagagcatttccaaaggctaaataattcatacaagattgaaactcggtcataatcaagata 5178  T
Q  529 aatacataatcttttacaattgactgtaattaaatcaatccaaca-tttcattaaaattacacgaatgtttgaaattcatcaaaatattaaagagtgctt 627  Q
    ||||||  ||||||||||||||    ||||||||| || || ||| |||  ||||||||| || || ||||||||||||| |||| |||| | ||||       
T  5177 aatacaatatcttttacaattgttcataattaaattaaaccgacattttggttaaaattaaacaaacgtttgaaattcatgaaaacattacaaagtgtcc 5078  T
Q  628 gaaattaaacaacacattacatatcattacataaaatatctatcgacattctacgcacatgcagatggaacgaacata-----aagatatattatcttca 722  Q
      |||||||| || ||||||| ||||||| || ||||  |||   |||||| |||||  |||| ||||||||||||||     |  |||||||||||||     
T  5077 ataattaaactactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttcc 4978  T
Q  723 accatattctgaaacataaatcctacgtc 751  Q
    ||||||||| ||||||||||||| |||||    
T  4977 accatattccgaaacataaatccgacgtc 4949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 57; Significance: 2e-23; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 449 - 609
Target Start/End: Original strand, 12546 - 12706
Alignment:
Q  449 tttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaat 548  Q
    ||||||||||||||| |||||||||||||| | | |||| |||| ||||||| |||| | | |||| |||||||||||  ||||||  ||||||||||||    
T  12546 tttttacctgtaattaaaccagagcatttcgaaaagcaaaacaattcatacaacattgaaactcggacataaacaagataaatacaatatcttttacaat 12645  T
Q  549 tgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatca 609  Q
    || |  |||||||||||| || ||||||  || ||||||||| || |||| ||||||||||    
T  12646 tgtccataattaaatcaaaccgacattttgtttaaattacacaaacgtttaaaattcatca 12706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 431 - 617
Target Start/End: Original strand, 22524 - 22711
Alignment:
Q  431 caagccatttttt--gcctatttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaac 528  Q
    |||||||||||||  ||| |||||||||||||||| |||||||||||||||| |||||| | || |||||||  ||| | | |||| ||||| |||||      
T  22524 caagccattttttcggccaatttttacctgtaattaaaccagagcatttccaaaggcaaaataattcatacaagattgaaactcggacataatcaagata 22623  T
Q  529 aatacataatcttttacaattgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaatatta 617  Q
    ||||||  |||||||||||||| |  ||||||||| || || ||||||  ||||||||| || || | |||||||||||||||| ||||    
T  22624 aatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattaaacaaacg-ttgaaattcatcaaaacatta 22711  T

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Target: scaffold0169 (Bit Score: 54; Significance: 1e-21; HSPs: 2)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 449 - 546
Target Start/End: Complemental strand, 1614 - 1517
Alignment:
Q  449 tttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttaca 546  Q
    ||||||||||||||| |||||||||||||||| |||||||| || ||||||| |||| | | ||||||||||||||||| ||||||  ||||||||||    
T  1614 tttttacctgtaattaaaccagagcatttccaaaggcaatataaatcatacaacattgaaactcggtcataaacaagaaaaatacaatatcttttaca 1517  T

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Target: scaffold0169; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 709 - 771
Target Start/End: Complemental strand, 10929 - 10865
Alignment:
Q  709 atatattatcttcaaccatattctgaaacataaatcctacgt--ctatcgtcacgaataagccaa 771  Q
    ||||||||||||| ||||||||||||||||||||||  ||||  |||||||||||||||||||||    
T  10929 atatattatcttccaccatattctgaaacataaatctgacgtcgctatcgtcacgaataagccaa 10865  T

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Target: scaffold0011 (Bit Score: 53; Significance: 5e-21; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 449 - 609
Target Start/End: Complemental strand, 236166 - 236006
Alignment:
Q  449 tttttacctgtaattcaaccagagcatttccagaggcaatacaactcatacatcatttacaatcggtcataaacaagaacaatacataatcttttacaat 548  Q
    ||||||||||||||| |||||||||||||| | |||||| |||| |||||||  ||| | | || | |||||||||||  ||||||  ||||||||||||    
T  236166 tttttacctgtaattaaaccagagcatttcgaaaggcaaaacaattcatacaatattgaaactcagacataaacaagataaatacaatatcttttacaat 236067  T
Q  549 tgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatca 609  Q
    || |  ||||||||||||  | ||||||  || ||||||||| || |||||||||||||||    
T  236066 tgtccataattaaatcaaatcgacatttggttcaaattacacaaacgtttgaaattcatca 236006  T

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Target: scaffold0057 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 537 - 658
Target Start/End: Original strand, 21868 - 21989
Alignment:
Q  537 atcttttacaattgactgtaattaaatcaatccaacatttcattaaaattacacgaatgtttgaaattcatcaaaatattaaagagtgcttgaaattaaa 636  Q
    |||||||||||||| |  |||||||||||| || ||||||  || ||||||||| || ||||||||||||||||||  ||||| ||||     |||||||    
T  21868 atcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttaaaaagtgtccataattaaa 21967  T
Q  637 caacacattacatatcattaca 658  Q
    ||||||||||||  ||||||||    
T  21968 caacacattacaactcattaca 21989  T

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Target: scaffold0057; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 449 - 500
Target Start/End: Original strand, 21792 - 21843
Alignment:
Q  449 tttttacctgtaattcaaccagagcatttccagaggcaatacaactcataca 500  Q
    ||||||||||||||| |||||||||||||||| | |||||| || |||||||    
T  21792 tttttacctgtaattaaaccagagcatttccaaaagcaatataaatcataca 21843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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