View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF11733_low_1 (Length: 1205)
Name: NF11733_low_1
Description: NF11733
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11733_low_1 |
 |  |
|
Alignment Details
Target: chr3 (Bit Score: 1161; Significance: 0; HSPs: 9)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 1161; E-Value: 0
Query Start/End: Original strand, 1 - 1188
Target Start/End: Complemental strand, 53492455 - 53491265
Alignment:
| Q |
1 |
aggggacatcgtgacttgcctttgaaacttaatcaatggtgcaatgctgttagatgggtggtcggagatcccacaccattcatcaggtactttctttttt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
53492455 |
aggggacatcgtgacttgcctttgaaactcaatcaatggtgcaatgttgttagatgggtggtcggagatcccacaccattcatcaggtactttctttttt |
53492356 |
T |
 |
| Q |
101 |
accatgttttcctttttccatgttataacaatgtgttggctgctgtaacgtaatgaaaactttcaagctttatataagaggcttaaacaattccaaaaat |
200 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
53492355 |
accatcttttcctttttccatgttataacaatgtgttggctgctgtaacgtaatgaaaactttcaagctttatataagaggcttaaacaattccaaaaat |
53492256 |
T |
 |
| Q |
201 |
tgatattatgcattgtagttatatgtcttacataatgccttaaaattctgcccattttctttttgaatggattttcatcttacggtgagttttctttttg |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
53492255 |
tgatattatgcattgtagttatatgtcttacataatgccttaaaattctgcccattttctttttgaatggattttcatcttacggtgagttttctttttg |
53492156 |
T |
 |
| Q |
301 |
aatgggtgttcaccttgtttgggtttggtgaattagtcttggatattgtttttatcatgcacatctactttatattggaacttgtttatagtcccatttt |
400 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
53492155 |
aatgggtgttcaccttgtttgggtttggtgaattagtcttggatattgtttttatcatgcacatctactttatattggaacttgtttatagtcccatttt |
53492056 |
T |
 |
| Q |
401 |
agggtgcttattcaaattttgattgcaggagtcgtgagttcctttggcaagaaggtcacagtgcttttgcaacagaggatgaagcacatgcagaggtatt |
500 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
53492055 |
agggtgcttattcaaattttgattgcaggagtcgtgagttcctttggcaagaaggtcacagtgcttttgcaacagaggatgaagcacatgcagaggtatt |
53491956 |
T |
 |
| Q |
501 |
ccgtc---tagttattttaggaatctgccttaatatatgcatctttggcatctgtaatgagtatttgaggcctttcctcctgttcaattttcctaggcat |
597 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
53491955 |
ccgtcaagtagttattttaggaatctgccttaatatatgcatctttggcatctgtaatgagtatttgaggcctttcctcctgttcaattttcctaggcat |
53491856 |
T |
 |
| Q |
598 |
ttattccaaacactggttgtgggatacaaggtgcaactacccattgtttgagacaaaagtttgctgaaaagttcgaggtaaaatttgaagatatgaaggg |
697 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
53491855 |
ttattccaaacactggttgtgggatacaaggtgcaactacccattgtttgagacaaaagtttgctgaaaagttcgaggtaaaatttgaagatatgaaggg |
53491756 |
T |
 |
| Q |
698 |
agagaaagcaatggtttggcagaattcatggggctattctactcgaactgtaagcttttaatgtctagagtatacatgaatggaaggattcctcttatgt |
797 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
53491755 |
agagaaagcaatggtttggcagaattcatggggctattctactcgaactgtaagcttttaatgtctagagtatacatgaatggaaggattcctcttatgt |
53491656 |
T |
 |
| Q |
798 |
acgattgcatttatatttttgtccgcttttttaacagattggagcgatggtgatggttcatggtgatgacaagggattggtgctacctcctaaagtagca |
897 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
53491655 |
acgattgcatttatatttttgtccgcttttttaacagattggagcgatggtgatggttcatggtgatgacaagggattggtgctacctcctaaagtagca |
53491556 |
T |
 |
| Q |
898 |
tcgactcaagtcattgtgattccagtgccttacaaagatgttgatactcaaggaatctatgacacttgtaaagcaactgtgaatatgttgtgtgaagcaa |
997 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
53491555 |
tcaactcaagtcattgtgattccagtgccttacaaagatgttgatactcaaggaatctatgacacttgtaaagcaactgtgaatatgttgtgtgaagcaa |
53491456 |
T |
 |
| Q |
998 |
aaaatacgtgctgagttagattctagagataactgttctcctgaaaggaagtattctgattgggaattgaaaggtgtccctctaaggattgaaattgggc |
1097 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
53491455 |
aaaatacgtgctgagttagattctagagataactgttctcctgaaaggaagtattctgattgggaattgaaaggtgtccctctaaggattgaaattgggc |
53491356 |
T |
 |
| Q |
1098 |
caaaggatttagtaaataagcaggttatctatgttgtcttgttgttgctcttatattcttacatatgtcattttgcttctactgtttatgt |
1188 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
53491355 |
caaaggatttagtaaataagcaggttatctatgttgtcttgttgttgctcttatattcttacatatgtcattttgcttctactgtttatgt |
53491265 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 475; E-Value: 0
Query Start/End: Original strand, 578 - 1179
Target Start/End: Complemental strand, 53499468 - 53498870
Alignment:
| Q |
578 |
tgttcaattttcctaggcatttattccaaacactggttgtgggatacaaggtgcaactacccattgtttgagacaaaagtttgctgaaaagttcgaggta |
677 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| |
|
|
| T |
53499468 |
tgttcagttttcctaggcatttattccaaacactggttgtgggatacaaggtgcaactacccattgcttgggacaaaagtttgctgaaaagttcgaggta |
53499369 |
T |
 |
| Q |
678 |
aaatttgaagatatgaagggagagaaagcaatggtttggcagaattcatggggctattctactcgaactgtaagcttttaatgtctagagtatacatgaa |
777 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
53499368 |
aaatttgaagataagaagggagagaaagcaatggtttggcagaactcatggggctattctactcgaactgtaagcttttaatgtctagagtatacatgaa |
53499269 |
T |
 |
| Q |
778 |
tggaaggattcctcttatgtacgattgcatttatatttttgtccgcttttttaacagattggagcgatggtgatggttcatggtgatgacaagggattgg |
877 |
Q |
| |
|
|||||| | |||| ||||||||||||||||||||||||| |||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||| |
|
|
| T |
53499268 |
tggaagaactccttttatgtacgattgcatttatattttagtccgcttatttaacagattggagcaatggtgatggttcatggcgatgacaagggattgg |
53499169 |
T |
 |
| Q |
878 |
tgctacctcctaaagtagcatcgactcaagtcattgtgattccagtgccttacaaagatgttgatactcaaggaatctatgacacttgtaaagcaactgt |
977 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
53499168 |
tgctacctcctaaagtagcatcaactcaagtcattgtgattccagtgccttacaaagatgttgatactcaaggaatctatgacacttgtaaagcaactgt |
53499069 |
T |
 |
| Q |
978 |
gaatatgttgtgtgaagcaaaaaatacgtgctgagttagattctagagataactgttctcctgaaaggaagtattctgattgggaattgaaaggtgtccc |
1077 |
Q |
| |
|
||||||| ||||||||||| ||||||||||||||||||||||||||||||| || |||||||||| |||||||||||| |||||| ||||||| ||||| |
|
|
| T |
53499068 |
gaatatgctgtgtgaagca-aaaatacgtgctgagttagattctagagatagctactctcctgaaaagaagtattctgaatgggaaatgaaaggcgtccc |
53498970 |
T |
 |
| Q |
1078 |
tctaaggattgaaattgggccaaaggatttagtaaataagcaggttatctatgttgtcttgttgttgctcttatattcttacatatgtcattttgcttct |
1177 |
Q |
| |
|
|||||||||||||||| |||||| |||||||| |||||| |||||||||||||||||| |||||||||||||||||||| || |||||||||||||||| |
|
|
| T |
53498969 |
tctaaggattgaaattaggccaatggatttagaaaataaacaggttatctatgttgtcctgttgttgctcttatattct--cacatgtcattttgcttct |
53498872 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 829 - 1175
Target Start/End: Complemental strand, 16070303 - 16069958
Alignment:
| Q |
829 |
taacagattggagcgatggtgatggttcatggtgatgacaagggattggtgctacctcctaaagtagcatcgactcaagtcattgtgattccagtgcctt |
928 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
16070303 |
taacagattggagtgatggtgatggttcatggtgatgacaagggattggtgctaccgcctaaagtagcatcaactcaagtcattgtgattccagtgcctt |
16070204 |
T |
 |
| Q |
929 |
acaaagatgttgatactcaaggaatctatgacacttgtaaagcaactgtgaatatgttgtgtgaagcaaaaaatacgtgctgagttagattctagagata |
1028 |
Q |
| |
|
||||| | |||||| | |||||||| ||||| ||||||||||| | ||||| |||||| |||||| ||||||| ||||| ||||||||||||||||||| |
|
|
| T |
16070203 |
acaaaaacgttgattgtgaaggaatcaatgacgcttgtaaagcagccgtgaagatgttgcgtgaag-aaaaaattcgtgccgagttagattctagagata |
16070105 |
T |
 |
| Q |
1029 |
actgttctcctgaaaggaagtattctgattgggaattgaaaggtgtccctctaaggattgaaattgggccaaaggatttagtaaataagcaggttatcta |
1128 |
Q |
| |
|
||| ||||| |||||| ||||||||||| |||||| |||||||||||||| ||| | |||||||||||| ||||| ||||| ||||||||||||||| | |
|
|
| T |
16070104 |
actattctcttgaaagaaagtattctgaatgggaaatgaaaggtgtccctttaatggttgaaattgggctaaagggtttaggaaataagcaggttattaa |
16070005 |
T |
 |
| Q |
1129 |
tgttgtcttgttgttgctcttatattcttacatatgtcattttgctt |
1175 |
Q |
| |
|
|||||| | || |||| ||| ||||||| ||||||||||| ||||| |
|
|
| T |
16070004 |
tgttgttatattattgcacttgtattctttcatatgtcattatgctt |
16069958 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 164; E-Value: 5e-87
Query Start/End: Original strand, 1 - 272
Target Start/End: Complemental strand, 53500375 - 53500118
Alignment:
| Q |
1 |
aggggacatcgtgacttgcctttgaaacttaatcaatggtgcaatgctgttagatgggtggtcggagatcccacaccattcatcaggtactttctttttt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| |
|
|
| T |
53500375 |
aggggacatcgtgacttgcctttgaaacttaatcaatggtgcaatgctgttagatgggtggtcggagatcccacaccgttcatcaggtactttttttttt |
53500276 |
T |
 |
| Q |
101 |
accatgttttcctttttccatgttataacaatgtgttggctgctgtaacgtaatgaaaactttcaagctttatataagaggcttaaacaattccaaaaat |
200 |
Q |
| |
|
||||| |||||||||||||||||||||| ||||||||| || |||||||||| |||||||||||||| ||||| ||||| |||||| |
|
|
| T |
53500275 |
accatcttttcctttttccatgttataatgatgtgttggttgatgtaacgtaa-caaaactttcaagct-------------ttaaaaaattctaaaaat |
53500190 |
T |
 |
| Q |
201 |
tgatattatgcattgtagttatatgtcttacataatgccttaaaattctgcccattttctttttgaatggat |
272 |
Q |
| |
|
||||||||||| |||||||| ||||||||||||||||||||||| |||||| |||||||||||||||||||| |
|
|
| T |
53500189 |
tgatattatgcgttgtagttttatgtcttacataatgccttaaagttctgcacattttctttttgaatggat |
53500118 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 141; E-Value: 3e-73
Query Start/End: Original strand, 369 - 564
Target Start/End: Complemental strand, 53500085 - 53499888
Alignment:
| Q |
369 |
tttatattggaacttgtttatagtcccattttagggtgcttattcaaattttgattgcaggagtcgtgagttcctttggcaagaaggtcacagtgctttt |
468 |
Q |
| |
|
||||||||| |||||||| ||||||||||||| |||||||||| |||||||||||||||||||||||||||| |||||||||||||||||| |||||||| |
|
|
| T |
53500085 |
tttatattgaaacttgttcatagtcccatttt-gggtgcttatacaaattttgattgcaggagtcgtgagtttctttggcaagaaggtcacggtgctttt |
53499987 |
T |
 |
| Q |
469 |
gcaacagaggatgaagcacatgcagaggtattccgtc---tagttattttaggaatctgccttaatatatgcatctttggcatctgtaatgagtatttg |
564 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||| ||||||||| ||||||||||||||||||| |||| |
|
|
| T |
53499986 |
gcaacagaggatgaagcacatgcagaggtattccatcaagtagttattttaggaatctgccttactatatgcatttttggcatctgtaatgagtctttg |
53499888 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 119; E-Value: 3e-60
Query Start/End: Original strand, 578 - 764
Target Start/End: Complemental strand, 16070576 - 16070390
Alignment:
| Q |
578 |
tgttcaattttcctaggcatttattccaaacactggttgtgggatacaaggtgcaactacccattgtttgagacaaaagtttgctgaaaagttcgaggta |
677 |
Q |
| |
|
||||||||||| |||||| ||||||||||||| |||| ||||||||||||||||| |||||||||||||| |||||||||||||||| ||||| ||| || |
|
|
| T |
16070576 |
tgttcaatttttctaggcttttattccaaacattggtcgtgggatacaaggtgcagctacccattgtttgggacaaaagtttgctgagaagtttgagata |
16070477 |
T |
 |
| Q |
678 |
aaatttgaagatatgaagggagagaaagcaatggtttggcagaattcatggggctattctactcgaactgtaagcttttaatgtcta |
764 |
Q |
| |
|
|| |||||||||| ||||| ||||||| |||||||||||||||| |||||||| | |||||||||||||||||||||| |||||||| |
|
|
| T |
16070476 |
aactttgaagataagaaggtagagaaaacaatggtttggcagaactcatgggggttttctactcgaactgtaagctttcaatgtcta |
16070390 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 76; E-Value: 2e-34
Query Start/End: Original strand, 343 - 546
Target Start/End: Complemental strand, 16071337 - 16071131
Alignment:
| Q |
343 |
atattgtttttatcatgcacatctactttatattggaacttg--tttatagtcccattttagggtgcttattcaaattttgattgcaggagtcgtgagtt |
440 |
Q |
| |
|
||||||||||||||| ||||||||||||| |||| ||||||| | |||||| |||||| | | ||| |||||||||||||||||||||||||||| |
|
|
| T |
16071337 |
atattgtttttatcacgcacatctactttgtattagaacttgcatatatagtat-attttaagcag-ttagacaaattttgattgcaggagtcgtgagtt |
16071240 |
T |
 |
| Q |
441 |
cctttggcaagaaggtcacagtgcttttgcaacagaggatgaagcacatgcagaggtattccgtc---tagttattttaggaatctgccttaatatatgc |
537 |
Q |
| |
|
|||||||||||||| |||||||||||||| | ||||| |||||| ||||||||||||||| || ||||| |||||||||| ||||||||||| ||| |
|
|
| T |
16071239 |
tctttggcaagaaggacacagtgcttttgcttctgaggaagaagcagatgcagaggtattccatcaagtagttgttttaggaatttgccttaatatttgc |
16071140 |
T |
 |
| Q |
538 |
atctttggc |
546 |
Q |
| |
|
|| |||||| |
|
|
| T |
16071139 |
atatttggc |
16071131 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 16071570 - 16071454
Alignment:
| Q |
1 |
aggggacatcgtgacttgcctttgaaacttaatcaatggtgcaatgctgttagatgggtggtcggagatcccacaccattcatcaggtac--tttctttt |
98 |
Q |
| |
|
|||||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| |||||| |||||| || ||| |||| |
|
|
| T |
16071570 |
aggggacaccgcgacttgcctttgaaacttaatcaatggtgcaatgcggttagatgggtggttggagatcccataccattaatcaggcactttttttttt |
16071471 |
T |
 |
| Q |
99 |
ttaccatgttttccttt |
115 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
16071470 |
ttaccatgttttccttt |
16071454 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1051 - 1089
Target Start/End: Complemental strand, 53516516 - 53516478
Alignment:
| Q |
1051 |
ttctgattgggaattgaaaggtgtccctctaaggattga |
1089 |
Q |
| |
|
|||||| |||||| ||||||||||||||||||||||||| |
|
|
| T |
53516516 |
ttctgaatgggaaatgaaaggtgtccctctaaggattga |
53516478 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 204; Significance: 1e-111; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 587 - 1122
Target Start/End: Original strand, 45354908 - 45355440
Alignment:
| Q |
587 |
ttcctaggcatttattccaaacactggttgtgggatacaaggtgcaactacccattgtttgagacaaaagtttgctgaaaagttcgaggtaaaatttgaa |
686 |
Q |
| |
|
|||||||||||||||||||||||||||| |||| ||||||||||||||| | ||||||||| ||||||| |||||| ||| ||| ||| |||| | |||| |
|
|
| T |
45354908 |
ttcctaggcatttattccaaacactggtcgtggtatacaaggtgcaacttctcattgtttgggacaaaattttgctaaaatgtttgagataaactatgaa |
45355007 |
T |
 |
| Q |
687 |
gatatgaagggagagaaagcaatggtttggcagaattcatggggctattctactcgaactgtaagcttttaatgtctagagtatacatgaatggaaggat |
786 |
Q |
| |
|
|| ||||||||||||||||||||| |||||||| || |||| |||| ||||||||||||||||||| ||| ||| | |||||||| || | | || |
|
|
| T |
45355008 |
aatgagaagggagagaaagcaatggtctggcagaactcgtgggcctatagtactcgaactgtaagcttt-aatttcttcaatatacatgcattgcaatat |
45355106 |
T |
 |
| Q |
787 |
tcctcttatgtacgattgcatttatatttttgtccgcttttttaacagattggagcgatggtgatggttcatggtgatgacaagggattggtgctacctc |
886 |
Q |
| |
|
| ||| | || ||||||||| | ||| | | |||||||| |||||||||| | ||||||||||||||||||||||||||||||||||||||| || | |
|
|
| T |
45355107 |
tggtctaaa-tatgattgcattaacgtttctttgcgctttttcaacagattggggtgatggtgatggttcatggtgatgacaagggattggtgctgccac |
45355205 |
T |
 |
| Q |
887 |
ctaaagtagcatcgactcaagtcattgtgattccagtgccttacaaagatgttgatactcaaggaatctatgacacttgtaaagcaactgtgaatatgtt |
986 |
Q |
| |
|
||||||||||||| |||||||||||||||||| |||||||||||||||| ||||||||||||||||| ||| | |||| ||||||||||||||||| |
|
|
| T |
45355206 |
ctaaagtagcatcagttcaagtcattgtgattcctgtgccttacaaagatgctgatactcaaggaatctttgatgcctgtaccgcaactgtgaatatgtt |
45355305 |
T |
 |
| Q |
987 |
gtgtgaagcaaaaaatacgtgctgagttagattctagagataactgttctcctgaaaggaagtattctgattgggaattgaaaggtgtccctctaaggat |
1086 |
Q |
| |
|
|| ||||| | ||| |||||||||| |||| | ||||| |||| |||||||| | |||| |||||| | |||||| |||||||||| ||||||||||| |
|
|
| T |
45355306 |
gttggaagc-aggaattcgtgctgagtcagatgccagagacaactattctcctggatggaaatattctcagtgggaaatgaaaggtgttcctctaaggat |
45355404 |
T |
 |
| Q |
1087 |
tgaaattgggccaaaggatttagtaaataagcaggt |
1122 |
Q |
| |
|
|||||| ||||| |||||||||| |||||||||||| |
|
|
| T |
45355405 |
tgaaatcgggcccaaggatttagcaaataagcaggt |
45355440 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 65; E-Value: 6e-28
Query Start/End: Original strand, 346 - 502
Target Start/End: Original strand, 45354189 - 45354343
Alignment:
| Q |
346 |
ttgtttttatcatgcacatctactttatattggaacttgtttatagtcccattttagggtgcttattcaaattttgattgcaggagtcgtgagttccttt |
445 |
Q |
| |
|
|||||||||||||| |||| ||||| ||| || |||| | |||||||| |||| ||||| ||||| | |||||| ||||||||||||||||||| |||| |
|
|
| T |
45354189 |
ttgtttttatcatgtacatttacttcgtat-ggcacttttgtatagtcc-atttcagggtacttataccaattttaattgcaggagtcgtgagtttcttt |
45354286 |
T |
 |
| Q |
446 |
ggcaagaaggtcacagtgcttttgcaacagaggatgaagcacatgcagaggtattcc |
502 |
Q |
| |
|
|||||||||| |||| ||||||||||||| |||| |||||| || |||||||||||| |
|
|
| T |
45354287 |
ggcaagaaggacacactgcttttgcaacaaaggaggaagcagatacagaggtattcc |
45354343 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 45353620 - 45353706
Alignment:
| Q |
1 |
aggggacatcgtgacttgcctttgaaacttaatcaatggtgcaatgctgttagatgggtggtcggagatcccacaccattcatcagg |
87 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||| |||||||||| ||||||||||| | || | |||||||||||||||||||| |
|
|
| T |
45353620 |
aggggacatcgtgacttgcctttgaagcttaatcagtggtgcaatgttgttagatgggagttcagcaatcccacaccattcatcagg |
45353706 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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