View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11733_low_26 (Length: 324)
Name: NF11733_low_26
Description: NF11733
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11733_low_26 |
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Alignment Details
Target: chr8 (Bit Score: 292; Significance: 1e-164; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 292; E-Value: 1e-164
Query Start/End: Original strand, 17 - 312
Target Start/End: Complemental strand, 7212623 - 7212328
Alignment:
| Q |
17 |
accaaacataaataatcattcaacaataataattctgacatttgatttaattcctaagctaatgttttttaatgtccaaacattcccttcattcattcca |
116 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
7212623 |
accaaacataaataatcattcaacaataataattctgacatttgatttaattcctaagctaatgttttttaatgtcaaaacattcccttcattcattcca |
7212524 |
T |
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| Q |
117 |
caaagcaaacataggaacttgattaaccaaacccaaatttccaagcctattgttgttcatgtggtcattttcattgcttccatcatcaaattttggtcca |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7212523 |
caaagcaaacataggaacttgattaaccaaacccaaatttccaagcctattgttgttcatgtggtcattttcattgcttccatcatcaaattttggtcca |
7212424 |
T |
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| Q |
217 |
tgcagtgtgaagtaaccatgtccataatctgctccactcactccaaactcattaggtagtcccaatgaacatttgggactttgagggttcatctca |
312 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7212423 |
tgcagtgtgaagtaaccatgtccataatctgctccactcactccaaactcattaggtagtcccaatgaacatttgggactttgagggttcatctca |
7212328 |
T |
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