View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11733_low_40 (Length: 234)
Name: NF11733_low_40
Description: NF11733
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11733_low_40 |
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Alignment Details
Target: chr1 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 3922864 - 3923078
Alignment:
| Q |
1 |
tataatgcacacttattaaatatagactcaaatggaaaagtaaatgtagactgagatgtccaagtaaacttcactgccaaatggatttcacccatcttag |
100 |
Q |
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| T |
3922864 |
tataatgcacacttattaaatatagactcaaatggaaaagtaaatgtagactgagatgtccaagtaaacttcactgccaaatggatttcacccatcttag |
3922963 |
T |
|
| Q |
101 |
ttacaccagagggatgtaaacctataagagggtaagaatgtgcatacactttgccgttttcaagtgttgatagacgaatccttatcttagccattatagt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3922964 |
ttacaccagagggatgtaaacctataagagggtaagaatgtgcatacactttgccgttttcaagtgttgatagacgaatccttatcttagccattatagt |
3923063 |
T |
|
| Q |
201 |
atctcttgcacctct |
215 |
Q |
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||||||||||||||| |
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| T |
3923064 |
atctcttgcacctct |
3923078 |
T |
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