View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11734_low_21 (Length: 264)

Name: NF11734_low_21
Description: NF11734
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11734_low_21
NF11734_low_21
[»] chr5 (34 HSPs)
chr5 (8-251)||(19169275-19169519)
chr5 (144-260)||(245664-245779)
chr5 (144-260)||(18695073-18695188)
chr5 (144-260)||(25556994-25557110)
chr5 (144-260)||(16901116-16901231)
chr5 (144-260)||(26639156-26639272)
chr5 (144-235)||(31055458-31055549)
chr5 (144-238)||(36641212-36641306)
chr5 (144-255)||(10379351-10379461)
chr5 (144-238)||(10293228-10293322)
chr5 (144-238)||(38408698-38408791)
chr5 (155-260)||(40428758-40428863)
chr5 (144-255)||(16307600-16307712)
chr5 (146-238)||(23765531-23765622)
chr5 (146-238)||(23815379-23815470)
chr5 (146-238)||(38476610-38476703)
chr5 (160-260)||(17704706-17704805)
chr5 (144-233)||(7835779-7835867)
chr5 (144-213)||(8645866-8645935)
chr5 (144-255)||(37961372-37961484)
chr5 (159-238)||(15885306-15885384)
chr5 (145-238)||(23040089-23040182)
chr5 (160-260)||(17825616-17825716)
chr5 (145-214)||(41663689-41663756)
chr5 (144-238)||(7187260-7187352)
chr5 (144-219)||(35302073-35302149)
chr5 (146-238)||(34125130-34125223)
chr5 (145-224)||(2373215-2373294)
chr5 (160-238)||(462851-462929)
chr5 (145-221)||(23040196-23040272)
chr5 (144-194)||(31648124-31648174)
chr5 (198-238)||(8673997-8674038)
chr5 (160-208)||(20653905-20653952)
chr5 (160-235)||(32465979-32466053)
[»] chr3 (46 HSPs)
chr3 (77-260)||(26628144-26628327)
chr3 (77-264)||(27852866-27853053)
chr3 (77-255)||(8542612-8542790)
chr3 (144-260)||(48907411-48907527)
chr3 (144-260)||(13080963-13081079)
chr3 (144-260)||(30155264-30155380)
chr3 (77-260)||(3328932-3329115)
chr3 (82-255)||(23428743-23428916)
chr3 (144-260)||(4522023-4522139)
chr3 (144-260)||(25179647-25179763)
chr3 (77-260)||(8339059-8339242)
chr3 (107-255)||(22447864-22448016)
chr3 (144-255)||(22500719-22500830)
chr3 (154-260)||(28155001-28155107)
chr3 (103-255)||(28173853-28174005)
chr3 (144-255)||(25022787-25022898)
chr3 (145-255)||(10743478-10743587)
chr3 (146-238)||(48860773-48860865)
chr3 (144-238)||(3780950-3781041)
chr3 (144-235)||(46673192-46673282)
chr3 (154-260)||(34878648-34878754)
chr3 (163-260)||(26633478-26633574)
chr3 (144-235)||(9496361-9496450)
chr3 (144-208)||(20001778-20001842)
chr3 (144-238)||(22416401-22416497)
chr3 (144-255)||(26127030-26127139)
chr3 (144-260)||(40836297-40836412)
chr3 (144-260)||(26177075-26177189)
chr3 (144-234)||(33279729-33279819)
chr3 (198-238)||(32960783-32960823)
chr3 (198-260)||(6927593-6927655)
chr3 (144-239)||(35201135-35201229)
chr3 (144-208)||(4775920-4775983)
chr3 (147-238)||(33105013-33105104)
chr3 (144-208)||(46387745-46387808)
chr3 (157-208)||(25336437-25336488)
chr3 (160-226)||(32315004-32315071)
chr3 (144-178)||(32960811-32960845)
chr3 (144-227)||(36311221-36311303)
chr3 (160-238)||(1743334-1743412)
chr3 (198-260)||(3821004-3821067)
chr3 (145-208)||(18388871-18388933)
chr3 (163-229)||(34296529-34296596)
chr3 (163-220)||(49657939-49657996)
chr3 (144-187)||(3820984-3821025)
chr3 (160-255)||(23320446-23320541)
[»] chr2 (26 HSPs)
chr2 (77-260)||(11175909-11176092)
chr2 (77-260)||(30714393-30714576)
chr2 (145-255)||(2986756-2986866)
chr2 (144-260)||(9787628-9787744)
chr2 (77-237)||(6763859-6764019)
chr2 (144-260)||(38716262-38716378)
chr2 (77-260)||(18537947-18538130)
chr2 (144-264)||(9051142-9051262)
chr2 (144-264)||(22191115-22191235)
chr2 (144-260)||(15735133-15735249)
chr2 (144-260)||(25298920-25299036)
chr2 (144-255)||(4587930-4588041)
chr2 (148-255)||(15700820-15700927)
chr2 (173-260)||(17368314-17368401)
chr2 (160-252)||(22387195-22387287)
chr2 (144-238)||(331781-331876)
chr2 (145-238)||(2190605-2190696)
chr2 (144-238)||(36464343-36464436)
chr2 (145-238)||(28365581-28365673)
chr2 (160-252)||(26829216-26829308)
chr2 (163-255)||(4104948-4105040)
chr2 (163-238)||(1020478-1020553)
chr2 (144-238)||(25884318-25884412)
chr2 (145-208)||(43301725-43301787)
chr2 (169-235)||(33199546-33199613)
chr2 (144-185)||(15147814-15147854)
[»] chr4 (35 HSPs)
chr4 (77-260)||(13397794-13397977)
chr4 (144-260)||(15058937-15059053)
chr4 (144-233)||(41877172-41877261)
chr4 (144-255)||(4433307-4433418)
chr4 (144-260)||(4357321-4357437)
chr4 (144-260)||(5304466-5304581)
chr4 (144-260)||(13826538-13826653)
chr4 (103-238)||(41034664-41034799)
chr4 (144-238)||(43793772-43793866)
chr4 (146-235)||(2931392-2931481)
chr4 (103-238)||(25011763-25011898)
chr4 (145-255)||(9195788-9195897)
chr4 (144-237)||(35475360-35475451)
chr4 (146-238)||(1588554-1588645)
chr4 (144-255)||(55780456-55780566)
chr4 (144-255)||(55844636-55844746)
chr4 (144-260)||(27018284-27018399)
chr4 (144-255)||(52838298-52838407)
chr4 (145-260)||(4098726-4098842)
chr4 (144-235)||(6789102-6789193)
chr4 (160-260)||(51291288-51291389)
chr4 (144-255)||(19232467-19232579)
chr4 (144-247)||(45633506-45633609)
chr4 (165-260)||(2715836-2715930)
chr4 (145-260)||(15734469-15734583)
chr4 (144-247)||(9397260-9397364)
chr4 (170-238)||(15795412-15795480)
chr4 (163-260)||(23362519-23362616)
chr4 (103-187)||(25618788-25618872)
chr4 (198-264)||(25618742-25618809)
chr4 (145-238)||(6209382-6209475)
chr4 (162-247)||(24626352-24626438)
chr4 (160-210)||(48158681-48158731)
chr4 (163-238)||(43336081-43336156)
chr4 (212-254)||(5931986-5932028)
[»] scaffold0025 (2 HSPs)
scaffold0025 (77-255)||(61816-61994)
scaffold0025 (144-260)||(19353-19467)
[»] chr7 (49 HSPs)
chr7 (144-260)||(27869314-27869430)
chr7 (77-238)||(2331016-2331176)
chr7 (144-260)||(19195332-19195448)
chr7 (144-260)||(20636688-20636804)
chr7 (144-260)||(35337641-35337757)
chr7 (144-251)||(21224480-21224587)
chr7 (144-238)||(20638560-20638654)
chr7 (82-255)||(3562557-3562729)
chr7 (144-261)||(42271401-42271518)
chr7 (84-260)||(41452368-41452544)
chr7 (144-254)||(24597640-24597750)
chr7 (144-255)||(8526865-8526975)
chr7 (144-261)||(31493980-31494096)
chr7 (144-252)||(17305834-17305941)
chr7 (144-255)||(11843302-11843412)
chr7 (144-260)||(19919722-19919836)
chr7 (144-260)||(36746622-36746738)
chr7 (103-255)||(48176087-48176238)
chr7 (103-261)||(13577904-13578060)
chr7 (144-234)||(18754411-18754501)
chr7 (153-264)||(10023899-10024010)
chr7 (160-235)||(44078015-44078090)
chr7 (144-238)||(21225689-21225782)
chr7 (160-260)||(14624688-14624787)
chr7 (167-255)||(24448167-24448256)
chr7 (145-255)||(4193621-4193730)
chr7 (146-255)||(5111512-5111619)
chr7 (107-238)||(10655362-10655492)
chr7 (160-253)||(26126339-26126432)
chr7 (144-227)||(24464646-24464728)
chr7 (144-238)||(4571484-4571577)
chr7 (160-219)||(6798074-6798133)
chr7 (144-238)||(39182006-39182097)
chr7 (145-224)||(3403206-3403286)
chr7 (144-251)||(26385330-26385437)
chr7 (160-235)||(3769489-3769564)
chr7 (172-238)||(39440261-39440328)
chr7 (160-220)||(15681682-15681743)
chr7 (144-227)||(25002778-25002859)
chr7 (160-238)||(9157191-9157269)
chr7 (166-260)||(15681720-15681815)
chr7 (144-238)||(23439662-23439757)
chr7 (160-235)||(3148008-3148084)
chr7 (183-264)||(9822214-9822296)
chr7 (183-264)||(10724139-10724221)
chr7 (145-237)||(19493391-19493481)
chr7 (160-238)||(29051704-29051781)
chr7 (198-253)||(6650632-6650688)
chr7 (160-239)||(43251349-43251429)
[»] chr1 (30 HSPs)
chr1 (144-260)||(24962022-24962138)
chr1 (103-260)||(24196289-24196446)
chr1 (144-261)||(24749867-24749984)
chr1 (103-255)||(46432340-46432492)
chr1 (144-260)||(48471982-48472098)
chr1 (77-260)||(3616801-3616984)
chr1 (144-260)||(19078044-19078159)
chr1 (144-260)||(19125934-19126049)
chr1 (77-260)||(29676081-29676264)
chr1 (144-238)||(4059663-4059757)
chr1 (144-255)||(43706778-43706888)
chr1 (103-237)||(28920799-28920927)
chr1 (144-255)||(51719246-51719356)
chr1 (161-261)||(27092970-27093070)
chr1 (145-222)||(21148048-21148126)
chr1 (144-247)||(2657644-2657747)
chr1 (144-251)||(16551771-16551879)
chr1 (145-227)||(29182152-29182234)
chr1 (146-238)||(31084753-31084844)
chr1 (144-238)||(2425294-2425387)
chr1 (144-238)||(22786099-22786193)
chr1 (145-238)||(4455183-4455277)
chr1 (160-238)||(47685186-47685264)
chr1 (146-238)||(18606824-18606917)
chr1 (145-238)||(2260519-2260611)
chr1 (144-234)||(28750346-28750437)
chr1 (144-227)||(9387762-9387846)
chr1 (144-238)||(10684862-10684957)
chr1 (160-208)||(16971935-16971983)
chr1 (160-239)||(26605417-26605494)
[»] chr6 (34 HSPs)
chr6 (77-260)||(4597524-4597707)
chr6 (144-255)||(24603430-24603541)
chr6 (144-260)||(34833994-34834110)
chr6 (144-255)||(18791426-18791537)
chr6 (77-260)||(26710426-26710609)
chr6 (154-260)||(35102610-35102716)
chr6 (145-238)||(31210864-31210957)
chr6 (144-255)||(32451795-32451906)
chr6 (144-238)||(15298554-15298648)
chr6 (144-238)||(24051077-24051171)
chr6 (107-260)||(25819717-25819869)
chr6 (144-260)||(8412827-8412943)
chr6 (144-260)||(14572297-14572412)
chr6 (144-238)||(22968296-22968389)
chr6 (144-238)||(23820004-23820097)
chr6 (144-235)||(3118748-3118839)
chr6 (144-239)||(32682418-32682512)
chr6 (166-260)||(18749215-18749309)
chr6 (144-260)||(22269477-22269591)
chr6 (144-238)||(4370967-4371061)
chr6 (145-255)||(19282335-19282445)
chr6 (144-208)||(18749299-18749363)
chr6 (145-254)||(4013791-4013900)
chr6 (145-227)||(26240025-26240109)
chr6 (145-227)||(16415482-16415564)
chr6 (164-238)||(24615835-24615908)
chr6 (144-235)||(12427300-12427392)
chr6 (154-238)||(9241732-9241815)
chr6 (144-208)||(2058993-2059057)
chr6 (103-238)||(34528180-34528311)
chr6 (189-238)||(2636890-2636940)
chr6 (211-260)||(20863847-20863896)
chr6 (181-238)||(12291558-12291616)
chr6 (202-255)||(23124844-23124898)
[»] chr8 (27 HSPs)
chr8 (144-252)||(17648312-17648420)
chr8 (144-260)||(19391506-19391622)
chr8 (77-260)||(4518986-4519169)
chr8 (77-264)||(30784379-30784566)
chr8 (107-260)||(19924297-19924450)
chr8 (103-261)||(8802518-8802675)
chr8 (146-260)||(38630126-38630240)
chr8 (144-264)||(33895443-33895563)
chr8 (144-261)||(4807718-4807836)
chr8 (144-260)||(5192390-5192506)
chr8 (82-260)||(12723380-12723558)
chr8 (103-234)||(44147000-44147130)
chr8 (144-238)||(22452314-22452408)
chr8 (144-260)||(21666393-21666509)
chr8 (144-261)||(32400440-32400557)
chr8 (144-215)||(21929967-21930037)
chr8 (144-238)||(18881644-18881736)
chr8 (149-238)||(3380272-3380361)
chr8 (145-227)||(3208050-3208132)
chr8 (148-235)||(4423173-4423262)
chr8 (144-260)||(7117233-7117348)
chr8 (146-250)||(18253015-18253117)
chr8 (200-251)||(23565214-23565265)
chr8 (144-208)||(1824676-1824737)
chr8 (144-208)||(1859121-1859182)
chr8 (144-247)||(31268348-31268450)
chr8 (190-260)||(41385609-41385680)
[»] scaffold0087 (1 HSPs)
scaffold0087 (77-260)||(25083-25266)
[»] scaffold0607 (1 HSPs)
scaffold0607 (144-260)||(2168-2284)
[»] scaffold0179 (1 HSPs)
scaffold0179 (144-264)||(5764-5884)
[»] scaffold1202 (1 HSPs)
scaffold1202 (144-238)||(1915-2009)
[»] scaffold0419 (1 HSPs)
scaffold0419 (103-260)||(3079-3236)
[»] scaffold0001 (1 HSPs)
scaffold0001 (144-260)||(142066-142181)
[»] scaffold0267 (1 HSPs)
scaffold0267 (144-260)||(3687-3801)
[»] scaffold0062 (2 HSPs)
scaffold0062 (148-255)||(49732-49839)
scaffold0062 (148-255)||(62271-62378)
[»] scaffold0060 (1 HSPs)
scaffold0060 (155-255)||(66254-66354)
[»] scaffold0406 (1 HSPs)
scaffold0406 (164-260)||(2080-2176)
[»] scaffold0150 (1 HSPs)
scaffold0150 (155-238)||(5911-5995)
[»] scaffold1875 (1 HSPs)
scaffold1875 (144-238)||(897-991)
[»] scaffold0007 (1 HSPs)
scaffold0007 (194-260)||(250637-250703)
[»] scaffold0002 (2 HSPs)
scaffold0002 (145-252)||(455000-455108)
scaffold0002 (151-227)||(455102-455179)
[»] scaffold0174 (1 HSPs)
scaffold0174 (146-238)||(29789-29879)
[»] scaffold0014 (1 HSPs)
scaffold0014 (163-238)||(112214-112290)
[»] scaffold0291 (1 HSPs)
scaffold0291 (145-238)||(9992-10084)
[»] scaffold0683 (1 HSPs)
scaffold0683 (144-199)||(5358-5413)
[»] scaffold0103 (1 HSPs)
scaffold0103 (189-238)||(3069-3119)
[»] scaffold0064 (1 HSPs)
scaffold0064 (198-255)||(54492-54550)


Alignment Details
Target: chr5 (Bit Score: 124; Significance: 7e-64; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 8 - 251
Target Start/End: Original strand, 19169275 - 19169519
Alignment:
Q  8 aagcagagataacgacgatgattttcatattttgagatatgacgtgtaatttggtgaataatacttacacta---accttcatttttcgtcttgtaaatt 104  Q
    ||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||   | ||||| |||||||||| ||| ||    
T  19169275 aagcacagataa-gacgatgattttcatattttgagatatgacgtgtaatttggtgaataatacttagactactaaacttcacttttcgtcttctaagtt 19169373  T
Q  105 tcaaaatgttgcaattttggccctttattnnnnnnnntcgcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaa 204  Q
    | |||||||| |||||||||  || ||||        | |||||||||| |||||||||||||| |||||||||||||||||||| ||||||||||||||    
T  19169374 ttaaaatgttacaattttggttctctattaaaaaaa-tggcaaaagtgatcccctatgtttaggaaaatatgctcatttgacctcttaacataagggaaa 19169472  T
Q  205 tatgctttttgaccccttatctttacaaaaagttatcattatggccc 251  Q
    ||||||||||||||||||||||||||||||||||   ||||||||||    
T  19169473 tatgctttttgaccccttatctttacaaaaagttgcaattatggccc 19169519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 144 - 260
Target Start/End: Original strand, 245664 - 245779
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcat 243  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||    
T  245664 gcaaaagtgacccc-tatgtttagggaaatatgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgat 245762  T
Q  244 tatggcccctttcttgg 260  Q
    |||||||||||| ||||    
T  245763 tatggccccttttttgg 245779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 144 - 260
Target Start/End: Original strand, 18695073 - 18695188
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcat 243  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||    
T  18695073 gcaaaagtgacccc-tatgtttagggaaatatgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgat 18695171  T
Q  244 tatggcccctttcttgg 260  Q
    |||||||||||| ||||    
T  18695172 tatggccccttttttgg 18695188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 144 - 260
Target Start/End: Complemental strand, 25557110 - 25556994
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcat 243  Q
    |||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||   ||    
T  25557110 gcaaaagtgaccccctatgtttagggaaatatgctcttttgaccccctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgcaat 25557011  T
Q  244 tatggcccctttcttgg 260  Q
    |||||||||||| ||||    
T  25557010 tatggccccttttttgg 25556994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 144 - 260
Target Start/End: Complemental strand, 16901231 - 16901116
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcat 243  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||   ||    
T  16901231 gcaaaagtgacccc-tatgtttagggaaatatgctcttttgacctcctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgat 16901133  T
Q  244 tatggcccctttcttgg 260  Q
    |||||||||||| ||||    
T  16901132 tatggccccttttttgg 16901116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 144 - 260
Target Start/End: Complemental strand, 26639272 - 26639156
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcat 243  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||   ||    
T  26639272 gcaaaagtgaccccatatgtttagggaaatatgctcttttgacctcctaacataagggaaatatgcgttttgaccccttatctttacaaaaagttgcaat 26639173  T
Q  244 tatggcccctttcttgg 260  Q
    ||||||| |||| ||||    
T  26639172 tatggcctcttttttgg 26639156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 144 - 235
Target Start/End: Complemental strand, 31055549 - 31055458
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaa 235  Q
    |||||||||||||||||||||||||||||||||||| ||||||| | |||||||||||||||||| ||||||||||||||||||||||||||    
T  31055549 gcaaaagtgaccccctatgtttagggaaatatgctcttttgaccccttaacataagggaaatatgttttttgaccccttatctttacaaaaa 31055458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 144 - 238
Target Start/End: Original strand, 36641212 - 36641306
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagtt 238  Q
    |||||||||| ||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  36641212 gcaaaagtgagcccctatgtttagagaaatatgctcttttgacctcctaacataagggaaatatgctttttgacccgttatctttataaaaagtt 36641306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 144 - 255
Target Start/End: Original strand, 10379351 - 10379461
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcat 243  Q
    |||||||||||| |||||||||||| |||||||||| ||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||   ||    
T  10379351 gcaaaagtgacctcctatgtttaggaaaatatgctcttttgacc-cctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgat 10379449  T
Q  244 tatggccccttt 255  Q
    |||| |||||||    
T  10379450 tatgaccccttt 10379461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 144 - 238
Target Start/End: Complemental strand, 10293322 - 10293228
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagtt 238  Q
    |||||| ||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| |||||||| |||||||||| |||||||||    
T  10293322 gcaaaaatgaccccctatgttttgggaaatatgctcttttgacctcctaacataagggaaatatgttttttgactccttatctttccaaaaagtt 10293228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 144 - 238
Target Start/End: Original strand, 38408698 - 38408791
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagtt 238  Q
    |||||||||||||||||||||||| ||||||||||| ||||||| | |||||||||||||||||| |||||||||||||||||||||||||||||    
T  38408698 gcaaaagtgaccccctatgtttagagaaatatgctcttttgaccac-taacataagggaaatatgttttttgaccccttatctttacaaaaagtt 38408791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 155 - 260
Target Start/End: Complemental strand, 40428863 - 40428758
Alignment:
Q  155 cccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcattatggcccctt 254  Q
    ||||| |||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||   |||||| ||||||    
T  40428863 cccctgtgtttagggaaatatgttcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaaattgcgattatgacccctt 40428764  T
Q  255 tcttgg 260  Q
    | ||||    
T  40428763 ttttgg 40428758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 144 - 255
Target Start/End: Complemental strand, 16307712 - 16307600
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttga-cctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatca 242  Q
    |||||||||||||||||||||||||||||||||||| ||||| || |||||||||||| ||||||| |||||||| ||||||||||||||||||||   |    
T  16307712 gcaaaagtgaccccctatgtttagggaaatatgctcttttgacccccctaacataaggaaaatatgttttttgactccttatctttacaaaaagttgcaa 16307613  T
Q  243 ttatggccccttt 255  Q
    ||||| |||||||    
T  16307612 ttatgaccccttt 16307600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 146 - 238
Target Start/End: Complemental strand, 23765622 - 23765531
Alignment:
Q  146 aaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagtt 238  Q
    |||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |  ||||||||||||||||||    
T  23765622 aaaagtgacccc-tatgtttagggaaatatgctcttttgacctcctaacataagggaaatatgctttttgatcatttatctttacaaaaagtt 23765531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 146 - 238
Target Start/End: Complemental strand, 23815470 - 23815379
Alignment:
Q  146 aaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagtt 238  Q
    |||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |  ||||||||||||||||||    
T  23815470 aaaagtgacccc-tatgtttagggaaatatgctcttttgacctcctaacataagggaaatatgctttttgatcatttatctttacaaaaagtt 23815379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 146 - 238
Target Start/End: Complemental strand, 38476703 - 38476610
Alignment:
Q  146 aaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgct-ttttgaccccttatctttacaaaaagtt 238  Q
    |||||||||||||||| ||||||||||||||||| ||||||| | |||||||||||||||||| | |||||||||||||||||  |||||||||    
T  38476703 aaaagtgaccccctatatttagggaaatatgctcttttgaccccataacataagggaaatatgatcttttgaccccttatcttctcaaaaagtt 38476610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 160 - 260
Target Start/End: Complemental strand, 17704805 - 17704706
Alignment:
Q  160 atgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcattatggcccctttcttg 259  Q
    ||||||||| |||||||||| ||||||| | ||||||||||||||||| ||||||||||| ||||||||||||||||||   |||||||||||||| |||    
T  17704805 atgtttaggaaaatatgctcttttgacc-cataacataagggaaatatactttttgaccctttatctttacaaaaagttgaaattatggccccttttttg 17704707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 144 - 233
Target Start/End: Original strand, 7835779 - 7835867
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaa 233  Q
    ||||||||| |  ||||||||||||||||||||||| ||||||| | |||||||||| ||||||| ||||||||||||||||||||||||    
T  7835779 gcaaaagtggcatcctatgtttagggaaatatgctcttttgacc-cataacataaggaaaatatgttttttgaccccttatctttacaaa 7835867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 144 - 213
Target Start/End: Original strand, 8645866 - 8645935
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttt 213  Q
    |||||| |||||||| |||||||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  8645866 gcaaaattgacccccaatgtttagggaaatatgctcttttgacctcctaacataagggaaatatgatttt 8645935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 144 - 255
Target Start/End: Complemental strand, 37961484 - 37961372
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttatca 242  Q
    |||||||||| |||| ||||||||||||||| |||| ||||||| |||||||||||||||| ||| | ||||||||||||| |||  |||||||||   |    
T  37961484 gcaaaagtgatcccccatgtttagggaaatacgctcttttgaccgcctaacataagggaaaaatgatcttttgaccccttaacttctcaaaaagttgcaa 37961385  T
Q  243 ttatggccccttt 255  Q
    |||||||||||||    
T  37961384 ttatggccccttt 37961372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 159 - 238
Target Start/End: Complemental strand, 15885384 - 15885306
Alignment:
Q  159 tatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagtt 238  Q
    |||||||| |||||||| ||| ||||||||| |||||||||||||||||| || |||| |||||||||||||||||||||    
T  15885384 tatgtttatggaaatattctcttttgacctcttaacataagggaaatatgtttgttga-cccttatctttacaaaaagtt 15885306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 145 - 238
Target Start/End: Complemental strand, 23040182 - 23040089
Alignment:
Q  145 caaaagtgaccccctatgtttagggaaatatgctcatttgacct--cctaacataagggaaatatgct-ttttgaccccttatctttacaaaaagtt 238  Q
    ||||||||||||   |||||||||||||||||||| ||||||||  |||||||||||||||||||| | |||||||||||||||||  |||||||||    
T  23040182 caaaagtgaccc---atgtttagggaaatatgctcttttgacctcccctaacataagggaaatatgatcttttgaccccttatcttctcaaaaagtt 23040089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 160 - 260
Target Start/End: Complemental strand, 17825716 - 17825616
Alignment:
Q  160 atgtttagggaaatatgctcatttgacctcctaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttatcattatggcccctttctt 258  Q
    |||||||||||||||||||| ||||||| ||||||||||| |||||||| | ||||||||| |||||||  |||||||||   |||||||||||||| ||    
T  17825716 atgtttagggaaatatgctcttttgacc-cctaacataagagaaatatgttcttttgaccctttatcttgtcaaaaagttgcgattatggcccctttttt 17825618  T
Q  259 gg 260  Q
    ||    
T  17825617 gg 17825616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 145 - 214
Target Start/End: Complemental strand, 41663756 - 41663689
Alignment:
Q  145 caaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgcttttt 214  Q
    |||||||||||||  |||||||||||||||||||| ||||||| | |||||||||||||||||| |||||    
T  41663756 caaaagtgacccc--atgtttagggaaatatgctcttttgaccccataacataagggaaatatgattttt 41663689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 144 - 238
Target Start/End: Original strand, 7187260 - 7187352
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagtt 238  Q
    |||||| |||||||  ||||||||||||||||  || |||||||  ||||||||||||||||||| ||| |||||  |||| |||||||||||||    
T  7187260 gcaaaattgacccc--atgtttagggaaatatattcttttgaccctctaacataagggaaatatgttttatgaccaattatttttacaaaaagtt 7187352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 144 - 219
Target Start/End: Complemental strand, 35302149 - 35302073
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatg--ctttttgaccc 219  Q
    ||||||||||||||| || ||||||||||||||||| ||||||| |||||||||| | |||||||  |||||||||||    
T  35302149 gcaaaagtgaccccc-atatttagggaaatatgctcttttgaccccctaacataatgtaaatatgatctttttgaccc 35302073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 146 - 238
Target Start/End: Original strand, 34125130 - 34125223
Alignment:
Q  146 aaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgct-ttttgaccccttatctttacaaaaagtt 238  Q
    |||||||||||   |||||||||||||||||||| ||||| | |||||||||||| ||||||| |  ||||||| ||||||||  |||||||||    
T  34125130 aaaagtgacccttcatgtttagggaaatatgctcttttgatcccctaacataaggaaaatatgatcatttgacctcttatcttctcaaaaagtt 34125223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 145 - 224
Target Start/End: Original strand, 2373215 - 2373294
Alignment:
Q  145 caaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgct-ttttgaccccttat 224  Q
    |||| ||||||||||||||||| | |||||||||| ||||||| | |||||||||||||||||| | || |||||||||||    
T  2373215 caaacgtgaccccctatgtttaagaaaatatgctcttttgacc-cataacataagggaaatatgatattatgaccccttat 2373294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 238
Target Start/End: Original strand, 462851 - 462929
Alignment:
Q  160 atgtttagggaaatatgctcatttgacctcctaacataagggaaatatgct-ttttgaccccttatctttacaaaaagtt 238  Q
    ||||||||||||||||||   ||||||||  ||| ||||| |||||||| | ||||||||||||||||||||||||||||    
T  462851 atgtttagggaaatatgcctttttgaccta-taatataagagaaatatgttcttttgaccccttatctttacaaaaagtt 462929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 221
Target Start/End: Complemental strand, 23040272 - 23040196
Alignment:
Q  145 caaaagtgaccccctatgtttagggaaatatgctcatttga-cctcctaacataagggaaatatg-ctttttgacccct 221  Q
    ||||||||||||| |||  |||||||||||||||| ||||| || |||||||||||||||||||| | |||||||||||    
T  23040272 caaaagtgaccccatat--ttagggaaatatgctcttttgacccccctaacataagggaaatatgaccttttgacccct 23040196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 144 - 194
Target Start/End: Original strand, 31648124 - 31648174
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaac 194  Q
    |||||||||||||| ||||||||||||||||||||  ||||||| ||||||    
T  31648124 gcaaaagtgaccccttatgtttagggaaatatgcttttttgaccccctaac 31648174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 198 - 238
Target Start/End: Complemental strand, 8674038 - 8673997
Alignment:
Q  198 agggaaatatgct-ttttgaccccttatctttacaaaaagtt 238  Q
    ||||||||||||| ||||||||||||||||||||||||||||    
T  8674038 agggaaatatgctcttttgaccccttatctttacaaaaagtt 8673997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 208
Target Start/End: Original strand, 20653905 - 20653952
Alignment:
Q  160 atgtttagggaaatatgctcatttgacctcctaacataagggaaatatg 208  Q
    |||||||||||||||||||| ||||||| ||||||||||| ||||||||    
T  20653905 atgtttagggaaatatgctcttttgacc-cctaacataagtgaaatatg 20653952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 160 - 235
Target Start/End: Complemental strand, 32466053 - 32465979
Alignment:
Q  160 atgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaa 235  Q
    ||||||||| |||||||||| ||||||| ||||| |||||  || || | ||||||||||||||||||||| ||||    
T  32466053 atgtttaggaaaatatgctcttttgacc-cctaatataagataattaagttttttgaccccttatctttaccaaaa 32465979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 104; Significance: 6e-52; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 77 - 260
Target Start/End: Complemental strand, 26628327 - 26628144
Alignment:
Q  77 ctaaccttcatttttcgtcttgtaaatttcaaaatgttgcaattttggccctttattnnnnnnnntcgcaaaagtgaccccctatgtttagggaaatatg 176  Q
    |||| |||||||||||| | | ||| |||||||||||||| ||||||||||  ||||        | |||||||||||||||||||||||||||||||||    
T  26628327 ctaaacttcatttttcgccctctaagtttcaaaatgttgcgattttggccccctattaaaaaaaatggcaaaagtgaccccctatgtttagggaaatatg 26628228  T
Q  177 ctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcattatggcccctttcttgg 260  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||| ||||    
T  26628227 ctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatggccccttttttgg 26628144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 77 - 264
Target Start/End: Complemental strand, 27853053 - 27852866
Alignment:
Q  77 ctaaccttcatttttcgtcttgtaaatttcaaaatgttgcaattttggccctttattnnnnnnnntcgcaaaagtgaccccctatgtttagggaaatatg 176  Q
    |||| ||||| |||||| | | ||| |||||||||||||||||||||||||  ||||        | |||||||||||||||||||||||||||||||||    
T  27853053 ctaaacttcacttttcgccctctaagtttcaaaatgttgcaattttggccccctattaaaaaaaatggcaaaagtgaccccctatgtttagggaaatatg 27852954  T
Q  177 ctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcattatggcccctttcttggacac 264  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||| | ||||||    
T  27852953 ctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatggcccctttttgggacac 27852866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 77 - 255
Target Start/End: Original strand, 8542612 - 8542790
Alignment:
Q  77 ctaaccttcatttttcgtcttgtaaatttcaaaatgttgcaattttggccctttattnnnnnnnntcgcaaaagtgaccccctatgtttagggaaatatg 176  Q
    |||| ||||| |||||||| | ||| ||||||||||||||||||||| |||  ||||        | |||||||||||||||||||||||||||||||||    
T  8542612 ctaaacttcacttttcgtcctctaagtttcaaaatgttgcaattttgaccccctattaaaaaaaatggcaaaagtgaccccctatgtttagggaaatatg 8542711  T
Q  177 ctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcattatggccccttt 255  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||    
T  8542712 ctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttt 8542790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 144 - 260
Target Start/End: Complemental strand, 48907527 - 48907411
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcat 243  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||   ||    
T  48907527 gcaaaagtgaccccctatgtttagggaaatatgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttaaaaaaagttgcgat 48907428  T
Q  244 tatggcccctttcttgg 260  Q
    |||||||||||| ||||    
T  48907427 tatggccccttttttgg 48907411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 144 - 260
Target Start/End: Original strand, 13080963 - 13081079
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcat 243  Q
    |||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||   ||    
T  13080963 gcaaaagtgaccccctatatttagggaaatatgctcttttgacctcataacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgat 13081062  T
Q  244 tatggcccctttcttgg 260  Q
    |||||||||||| ||||    
T  13081063 tatggccccttttttgg 13081079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 144 - 260
Target Start/End: Complemental strand, 30155380 - 30155264
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcat 243  Q
    |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||   ||    
T  30155380 gcaaaagtgatcccctatgtttagggaaatatgctcttttgacctcctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgat 30155281  T
Q  244 tatggcccctttcttgg 260  Q
    |||||||||||| ||||    
T  30155280 tatggccccttttttgg 30155264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 77 - 260
Target Start/End: Complemental strand, 3329115 - 3328932
Alignment:
Q  77 ctaaccttcatttttcgtcttgtaaatttcaaaatgttgcaattttggccctttattnnnnnnnntcgcaaaagtgaccccctatgtttagggaaatatg 176  Q
    |||| ||||| |||||| | | ||| |||||||||||||| ||||||||||  ||||        | | ||||||||||||||| |||||||||||||||    
T  3329115 ctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttggccccctattaaaaaaaatggaaaaagtgaccccctaagtttagggaaatatg 3329016  T
Q  177 ctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcattatggcccctttcttgg 260  Q
    ||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||   |||||||||||||| ||||    
T  3329015 ctcttttgacctcctaacataagggaaatatgccttttgaccccttatctttacaaaaagttgcgattatggccccttttttgg 3328932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 82 - 255
Target Start/End: Complemental strand, 23428916 - 23428743
Alignment:
Q  82 cttcatttttcgtcttgtaaatttcaaaatgttgcaattttggccctttattnnnnnnnntcgcaaaagtgaccccctatgtttagggaaatatgctcat 181  Q
    |||||||||||| |   ||| |||||||||||| ||||||||||||  ||||        | |||||||||||||||||||||||||||||||||||| |    
T  23428916 cttcatttttcgccccctaagtttcaaaatgttacaattttggccccctattaaaaaaaatggcaaaagtgaccccctatgtttagggaaatatgctctt 23428817  T
Q  182 ttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcattatggccccttt 255  Q
    |||||| |||||||||||||||||||| |||||||||||||||||||||||||||||   |||||| |||||||    
T  23428816 ttgaccccctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgattatgaccccttt 23428743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 144 - 260
Target Start/End: Original strand, 4522023 - 4522139
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcat 243  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||   ||    
T  4522023 gcaaaagtgaccccatatgtttagggaaatatgctcttttgacctcttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgat 4522122  T
Q  244 tatggcccctttcttgg 260  Q
    ||| |||||||| ||||    
T  4522123 tattgccccttttttgg 4522139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 144 - 260
Target Start/End: Original strand, 25179647 - 25179763
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcat 243  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| |||| |||||||| |||||||||||||||||||||||||||||   ||    
T  25179647 gcaaaagtgaccccctatgtttagggaaatatgctcttttgacctcctaacgtaagagaaatatgttttttgaccccttatctttacaaaaagttgcgat 25179746  T
Q  244 tatggcccctttcttgg 260  Q
    |||||||||||| ||||    
T  25179747 tatggccccttttttgg 25179763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 77 - 260
Target Start/End: Complemental strand, 8339242 - 8339059
Alignment:
Q  77 ctaaccttcatttttcgtcttgtaaatttcaaaatgttgcaattttggccctttattnnnnnnnntcgcaaaagtgaccccctatgtttagggaaatatg 176  Q
    |||| ||||| |||||| | | ||| |||||||||||||||||||||||||  ||||        | |||||||||||||| ||||||||||||||||||    
T  8339242 ctaaacttcacttttcgccctctaagtttcaaaatgttgcaattttggccccctattaaaaaaaatggcaaaagtgaccccttatgtttagggaaatatg 8339143  T
Q  177 ctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcattatggcccctttcttgg 260  Q
    ||  ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||   ||||||||| |||| ||||    
T  8339142 cttttttgacctcctaacataatagaaatatgctttttgaccccttatctttacaaaaagttgcgattatggcctcttttttgg 8339059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 107 - 255
Target Start/End: Complemental strand, 22448016 - 22447864
Alignment:
Q  107 aaaatgttgcaattttggccctttattnnnnnnnntcgcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaata 206  Q
    |||||||||||||||||||||  ||||        | |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  22448016 aaaatgttgcaattttggccccctattaaaaaatatggcaaaagtgacctcctatgtttagggaaatatgctcttttgacctcctaacataagggaaata 22447917  T
Q  207 tgctttttgacccct----tatctttacaaaaagttatcattatggccccttt 255  Q
    |||||||||||||||    |||||||||||||||||   ||||||||||||||    
T  22447916 tgctttttgaccccttatatatctttacaaaaagttgcgattatggccccttt 22447864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 144 - 255
Target Start/End: Complemental strand, 22500830 - 22500719
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcat 243  Q
    ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||   ||    
T  22500830 gcaaaagtgaccccctatgtttaggaaaatatgctcttttgacctcctaacataagggaaatatgctttttgatcccttatatttacaaaaagttgcgat 22500731  T
Q  244 tatggccccttt 255  Q
    ||||| ||||||    
T  22500730 tatggtcccttt 22500719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 154 - 260
Target Start/End: Complemental strand, 28155107 - 28155001
Alignment:
Q  154 ccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcattatggcccct 253  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||   |||||||||| |    
T  28155107 ccccatatgtttagggaaatatgctcttttgacctcctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatggccctt 28155008  T
Q  254 ttcttgg 260  Q
    || ||||    
T  28155007 tttttgg 28155001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 103 - 255
Target Start/End: Complemental strand, 28174005 - 28173853
Alignment:
Q  103 tttcaaaatgttgcaattttggccctttattnnnnnnnntcgcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataaggga 202  Q
    |||||||||||||| ||||||||||  ||||        | |||||| ||| || |||||||||||||||||||||| ||||||| ||||||||||||||    
T  28174005 tttcaaaatgttgcgattttggccccctattaaaaaaaatggcaaaaatgatcctctatgtttagggaaatatgctcttttgaccccctaacataaggga 28173906  T
Q  203 aatatgctttttgaccccttatctttacaaaaagttatcattatggccccttt 255  Q
    |||||| |||||||||||||||||||||||||||||   |||||| |||||||    
T  28173905 aatatgttttttgaccccttatctttacaaaaagttgcgattatgaccccttt 28173853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 144 - 255
Target Start/End: Complemental strand, 25022898 - 25022787
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcat 243  Q
    |||||||||||||||||||||||||||||||||||| ||||||| | |||||||||||| ||||| ||||||| |||||||||||||||||||||   ||    
T  25022898 gcaaaagtgaccccctatgtttagggaaatatgctcttttgaccccataacataagggatatatgttttttgaacccttatctttacaaaaagttgcgat 25022799  T
Q  244 tatggccccttt 255  Q
    |||| |||||||    
T  25022798 tatgaccccttt 25022787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 145 - 255
Target Start/End: Original strand, 10743478 - 10743587
Alignment:
Q  145 caaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcatt 244  Q
    |||||||||| |||||||||||||||||||||||| ||| ||| |||||||||||||||||||| |||||||||||||||||||||||||||||   |||    
T  10743478 caaaagtgactccctatgtttagggaaatatgctcttttaacc-cctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgatt 10743576  T
Q  245 atggccccttt 255  Q
    ||| |||||||    
T  10743577 atgaccccttt 10743587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 146 - 238
Target Start/End: Original strand, 48860773 - 48860865
Alignment:
Q  146 aaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagtt 238  Q
    |||| ||||||| ||||||||||||||||||||  |||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||    
T  48860773 aaaaatgaccccttatgtttagggaaatatgctattttgaccttctaacataagggaaatatgttttttgaccccttatctttacaaaaagtt 48860865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 144 - 238
Target Start/End: Original strand, 3780950 - 3781041
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagtt 238  Q
    ||||||||||||||  |||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  3780950 gcaaaagtgacccc--atgtttagggaaatatgctcttttgacc-cctaacataagggaaatatgctttttgaccctttatctttacaaaaagtt 3781041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 144 - 235
Target Start/End: Complemental strand, 46673282 - 46673192
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaa 235  Q
    |||||||||| ||||||||||||||||||||||||| ||||||  |||||||||||||||||||| ||||||||||||||||||||||||||    
T  46673282 gcaaaagtgatcccctatgtttagggaaatatgctcttttgactccctaacataagggaaatatg-tttttgaccccttatctttacaaaaa 46673192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 154 - 260
Target Start/End: Complemental strand, 34878754 - 34878648
Alignment:
Q  154 ccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcattatggcccct 253  Q
    ||||||| |||||||||||||||||| ||||||| ||||| |||||||||||||||||||||| |||||||||||||||||||||   |||||||| |||    
T  34878754 ccccctaagtttagggaaatatgctcttttgaccccctaatataagggaaatatgctttttgatcccttatctttacaaaaagtttcaattatggcacct 34878655  T
Q  254 ttcttgg 260  Q
    || ||||    
T  34878654 tttttgg 34878648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 163 - 260
Target Start/End: Complemental strand, 26633574 - 26633478
Alignment:
Q  163 tttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcattatggcccctttcttgg 260  Q
    ||||||||||||||||| ||||||| ||||||||||| |||||||| |||||||||||||||||||||||||||||   |||||||||||||| ||||    
T  26633574 tttagggaaatatgctcttttgacc-cctaacataagagaaatatgttttttgaccccttatctttacaaaaagttgcgattatggccccttttttgg 26633478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 144 - 235
Target Start/End: Complemental strand, 9496450 - 9496361
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaa 235  Q
    |||||||||||| |  |||||||||||||||||||| |||||||  ||||||||| |||||||||||||||| |||||||||||||||||||    
T  9496450 gcaaaagtgaccac--atgtttagggaaatatgctcttttgaccctctaacataaaggaaatatgctttttgtccccttatctttacaaaaa 9496361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 144 - 208
Target Start/End: Original strand, 20001778 - 20001842
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatg 208  Q
    |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  20001778 gcaaaagtgaccccctatgtttagggaaatatgctcttttgaccccctaacataagggaaatatg 20001842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 144 - 238
Target Start/End: Original strand, 22416401 - 22416497
Alignment:
Q  144 gcaaaagtgacccccta-tgtttagggaaatatgctcatttgacctcctaacataagggaaatatgct-ttttgaccccttatctttacaaaaagtt 238  Q
    ||||||||||||||| | |||||||||| |||||||| |||||||| ||||||||||| ||||||||| ||||||||| ||||||||||||||||||    
T  22416401 gcaaaagtgaccccccaatgtttagggatatatgctcttttgaccttctaacataaggtaaatatgctcttttgacccattatctttacaaaaagtt 22416497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 144 - 255
Target Start/End: Complemental strand, 26127139 - 26127030
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcat 243  Q
    ||||||||||||||  ||||||||||||||||| |  |||||||  |||||||| ||||||||||||||||| ||||||||||||||||||||||   ||    
T  26127139 gcaaaagtgacccc--atgtttagggaaatatgttattttgaccctctaacataggggaaatatgctttttggccccttatctttacaaaaagttgcgat 26127042  T
Q  244 tatggccccttt 255  Q
    ||||||| ||||    
T  26127041 tatggcctcttt 26127030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 144 - 260
Target Start/End: Complemental strand, 40836412 - 40836297
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatct-ttacaaaaagttatca 242  Q
    ||||||||||||||  ||||||||||||||||| || ||||||| ||||| |||||||||||||| ||||||||||||||| | | | ||||||||   |    
T  40836412 gcaaaagtgacccc--atgtttagggaaatatgttcttttgaccccctaatataagggaaatatgttttttgaccccttatatctcaaaaaaagttgcga 40836315  T
Q  243 ttatggcccctttcttgg 260  Q
    ||||||||||||| ||||    
T  40836314 ttatggccccttttttgg 40836297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 144 - 260
Target Start/End: Complemental strand, 26177189 - 26177075
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcat 243  Q
    ||||||||||||||  ||||| |||||||||||||  |||||||  |||||||| ||||||||||||||||| | | ||||||||||||||||||   ||    
T  26177189 gcaaaagtgacccc--atgttcagggaaatatgctattttgaccctctaacataggggaaatatgctttttggctcattatctttacaaaaagttgcgat 26177092  T
Q  244 tatggcccctttcttgg 260  Q
    ||||||| |||| ||||    
T  26177091 tatggcctcttttttgg 26177075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 144 - 234
Target Start/End: Complemental strand, 33279819 - 33279729
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgct-ttttgaccccttatctttacaaaa 234  Q
    ||||||||| ||| || |||||||| |||||||||| ||||||| |||||||||||||||||||||| |||||| ||||||| |||||||||    
T  33279819 gcaaaagtggccctct-tgtttaggaaaatatgctcttttgaccccctaacataagggaaatatgctcttttgatcccttatatttacaaaa 33279729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 198 - 238
Target Start/End: Complemental strand, 32960823 - 32960783
Alignment:
Q  198 agggaaatatgctttttgaccccttatctttacaaaaagtt 238  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  32960823 agggaaatatgctttttgaccccttatctttacaaaaagtt 32960783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 198 - 260
Target Start/End: Original strand, 6927593 - 6927655
Alignment:
Q  198 agggaaatatgctttttgaccccttatctttacaaaaagttatcattatggcccctttcttgg 260  Q
    ||||||||||| |||||||||||||||||||||||||||||   |||||| ||||||| ||||    
T  6927593 agggaaatatgttttttgaccccttatctttacaaaaagttgcgattatgaccccttttttgg 6927655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 144 - 239
Target Start/End: Complemental strand, 35201229 - 35201135
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgct-ttttgaccccttatctttacaaaaagtta 239  Q
    |||||| |||||||  |||||| |||||| |||||| |||||||  ||||||||| ||||||||| | |||||||||||||||||  ||||||||||    
T  35201229 gcaaaaatgaccccacatgttttgggaaacatgctcttttgacc--ctaacataaaggaaatatgatattttgaccccttatcttctcaaaaagtta 35201135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 144 - 208
Target Start/End: Original strand, 4775920 - 4775983
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatg 208  Q
    ||||||||||||||| |||||||||||||||||||  ||||||| ||| ||||| ||||||||||    
T  4775920 gcaaaagtgaccccc-atgtttagggaaatatgctattttgaccccctcacatacgggaaatatg 4775983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 147 - 238
Target Start/End: Original strand, 33105013 - 33105104
Alignment:
Q  147 aaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgct-ttttgaccccttatctttacaaaaagtt 238  Q
    |||||||||||| |||||||||||||||||||| ||||| || ||| |||||| |||||||| | |||||| ||||| ||||  |||||||||    
T  33105013 aaagtgaccccccatgtttagggaaatatgctcttttgatct-ctatcataagagaaatatgttattttgatcccttttcttcccaaaaagtt 33105104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 144 - 208
Target Start/End: Complemental strand, 46387808 - 46387745
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatg 208  Q
    ||||||||||||||| ||||||| ||||| |||||| ||||| | ||||||||||||||||||||    
T  46387808 gcaaaagtgaccccc-atgtttaaggaaacatgctcttttgatcccctaacataagggaaatatg 46387745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 208
Target Start/End: Original strand, 25336437 - 25336488
Alignment:
Q  157 cctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatg 208  Q
    ||||| ||||||||| ||||||| ||||||| ||||||||||||||||||||    
T  25336437 cctatatttagggaattatgctcttttgaccccctaacataagggaaatatg 25336488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 226
Target Start/End: Original strand, 32315004 - 32315071
Alignment:
Q  160 atgtttagggaaatatgctcatttgacctcctaacataagggaaatatgct-ttttgaccccttatct 226  Q
    ||||||||||||||||| || ||||||| |||||||| ||||||||||  | ||||||||||||||||    
T  32315004 atgtttagggaaatatgttcttttgaccccctaacatgagggaaatattatattttgaccccttatct 32315071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 144 - 178
Target Start/End: Complemental strand, 32960845 - 32960811
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgct 178  Q
    |||||||||||||||||||||||||||||||||||    
T  32960845 gcaaaagtgaccccctatgtttagggaaatatgct 32960811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 144 - 227
Target Start/End: Original strand, 36311221 - 36311303
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatg-ctttttgaccccttatctt 227  Q
    |||||||||||||| |||  ||||| |||||| ||| ||||||| | |||||||||||||||||| | |||| ||||||||||||    
T  36311221 gcaaaagtgaccccatat--ttaggaaaatatactcttttgaccccataacataagggaaatatgacattttaaccccttatctt 36311303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 160 - 238
Target Start/End: Original strand, 1743334 - 1743412
Alignment:
Q  160 atgtttagggaaatatgctcatttgacctcctaacataagggaaatatgct-ttttgaccccttatctttacaaaaagtt 238  Q
    ||||||||| |||||| ||| ||||||| |||||||||| |||||| || | |||||||||||||||||  |||||||||    
T  1743334 atgtttaggaaaatatactcttttgaccccctaacataa-ggaaatgtgatcttttgaccccttatcttctcaaaaagtt 1743412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 198 - 260
Target Start/End: Original strand, 3821004 - 3821067
Alignment:
Q  198 agggaaatatgct-ttttgaccccttatctttacaaaaagttatcattatggcccctttcttgg 260  Q
    ||||||||||||| ||||||||| ||||||||||||||||||   |||||| ||||||| ||||    
T  3821004 agggaaatatgctcttttgaccctttatctttacaaaaagttgcgattatgaccccttttttgg 3821067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 145 - 208
Target Start/End: Complemental strand, 18388933 - 18388871
Alignment:
Q  145 caaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatg 208  Q
    |||||||||||||| ||||| |||||||||||||| ||||||| |||| ||||||  |||||||    
T  18388933 caaaagtgaccccc-atgttaagggaaatatgctcttttgaccccctaccataagataaatatg 18388871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 163 - 229
Target Start/End: Complemental strand, 34296596 - 34296529
Alignment:
Q  163 tttagggaaatatgctcatttgacctcctaacataagggaaatatgct-ttttgaccccttatcttta 229  Q
    ||||||||||||||||| |||||||  ||||| | | ||||||||||| ||||||||| |||||||||    
T  34296596 tttagggaaatatgctcttttgaccctctaactttatggaaatatgctcttttgaccctttatcttta 34296529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 49657996 - 49657939
Alignment:
Q  163 tttagggaaatatgctcatttgacctcctaacataagggaaatatgct-ttttgacccc 220  Q
    ||||||||||||||||| ||||||| |||||||||||| ||||||| | ||||||||||    
T  49657996 tttagggaaatatgctcttttgacc-cctaacataaggaaaatatgatcttttgacccc 49657939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 144 - 187
Target Start/End: Original strand, 3820984 - 3821025
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacc 187  Q
    ||||||||||||||  |||||||||||||||||||| |||||||    
T  3820984 gcaaaagtgacccc--atgtttagggaaatatgctcttttgacc 3821025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 255
Target Start/End: Original strand, 23320446 - 23320541
Alignment:
Q  160 atgtttagggaaatatgctcatttgacctcctaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttatcattatggccccttt 255  Q
    |||||||||||||||||||| ||||||| ||||||||||| ||| | || | | |||||  ||||||||  |||||||||   ||||||||||||||    
T  23320446 atgtttagggaaatatgctcttttgacc-cctaacataagagaagtctgatatattgacttcttatcttctcaaaaagttgctattatggccccttt 23320541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 104; Significance: 6e-52; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 77 - 260
Target Start/End: Original strand, 11175909 - 11176092
Alignment:
Q  77 ctaaccttcatttttcgtcttgtaaatttcaaaatgttgcaattttggccctttattnnnnnnnntcgcaaaagtgaccccctatgtttagggaaatatg 176  Q
    |||| ||||| |||||| | | ||| |||||||||||||| ||||||||||  ||||        | |||||||||||||||||||||||||||||||||    
T  11175909 ctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttggccccctattaaaaaaaatggcaaaagtgaccccctatgtttagggaaatatg 11176008  T
Q  177 ctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcattatggcccctttcttgg 260  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| ||||    
T  11176009 ctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgtgattatggccccttttttgg 11176092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 77 - 260
Target Start/End: Complemental strand, 30714576 - 30714393
Alignment:
Q  77 ctaaccttcatttttcgtcttgtaaatttcaaaatgttgcaattttggccctttattnnnnnnnntcgcaaaagtgaccccctatgtttagggaaatatg 176  Q
    |||| ||||| |||||| | | ||||||| |||||||||||||||||||||  ||||        | |||||||||||||||||||||| ||||||||||    
T  30714576 ctaaacttcacttttcgccctctaaattttaaaatgttgcaattttggccccctattaaaaaaaatggcaaaagtgaccccctatgtttcgggaaatatg 30714477  T
Q  177 ctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcattatggcccctttcttgg 260  Q
    ||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| | |||||||||||||| ||||    
T  30714476 ctcttttgacctcctaacataagggaaatatgctttttgacccgttatctttacaaaaagttgtgattatggccccttttttgg 30714393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 145 - 255
Target Start/End: Original strand, 2986756 - 2986866
Alignment:
Q  145 caaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcatt 244  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||    
T  2986756 caaaagtgaccccctatgtttagggaaatatgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgatt 2986855  T
Q  245 atggccccttt 255  Q
    |||||||||||    
T  2986856 atggccccttt 2986866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 144 - 260
Target Start/End: Original strand, 9787628 - 9787744
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcat 243  Q
    ||||||||||||| |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  ||    
T  9787628 gcaaaagtgacccactatgtttagggaaatatgctcttttgacctgctaacataagggaaatatgctttttgaccccttatctttacaaaaagttacgat 9787727  T
Q  244 tatggcccctttcttgg 260  Q
    |||||||||||| ||||    
T  9787728 tatggccccttttttgg 9787744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 77 - 237
Target Start/End: Complemental strand, 6764019 - 6763859
Alignment:
Q  77 ctaaccttcatttttcgtcttgtaaatttcaaaatgttgcaattttggccctttattnnnnnnnntcgcaaaagtgaccccctatgtttagggaaatatg 176  Q
    |||| |||||||||||| | | ||| |||||||||||||| ||||||| ||  ||||        | |||||||||||||||||||||||||||||||||    
T  6764019 ctaaacttcatttttcgccctctaagtttcaaaatgttgcgattttggtcccctattaaaaaaaatggcaaaagtgaccccctatgtttagggaaatatg 6763920  T
Q  177 ctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagt 237  Q
    ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  6763919 ctcttttgacctcctaacataaggaaaatatgctttttgaccccttatctttacaaaaagt 6763859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 144 - 260
Target Start/End: Original strand, 38716262 - 38716378
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcat 243  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||   ||    
T  38716262 gcaaaagtgaccccatatgtttagggaaatatgctcttttgacctcctaacataagagaaatatgctttttgaccccttatctttacaaaaagttgcgat 38716361  T
Q  244 tatggcccctttcttgg 260  Q
    |||||||||||| ||||    
T  38716362 tatggccccttttttgg 38716378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 77 - 260
Target Start/End: Complemental strand, 18538130 - 18537947
Alignment:
Q  77 ctaaccttcatttttcgtcttgtaaatttcaaaatgttgcaattttggccctttattnnnnnnnntcgcaaaagtgaccccctatgtttagggaaatatg 176  Q
    |||| ||||| |||||| | | ||| |||||||||||||| ||||||||||  ||||        | |||||||||||||||||||||||||||||||||    
T  18538130 ctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttggccccctattaaaaaaaatggcaaaagtgaccccctatgtttagggaaatatg 18538031  T
Q  177 ctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcattatggcccctttcttgg 260  Q
    ||  ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||   |||||||||||||| ||||    
T  18538030 cttttttgacctcataacattagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgg 18537947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 144 - 264
Target Start/End: Complemental strand, 9051262 - 9051142
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcat 243  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||   ||    
T  9051262 gcaaaagtgactccctatgtttagggaaatatgctcttttgacctcctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgat 9051163  T
Q  244 tatggcccctttcttggacac 264  Q
    |||||||| ||| | ||||||    
T  9051162 tatggcccttttttgggacac 9051142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 144 - 264
Target Start/End: Original strand, 22191115 - 22191235
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcat 243  Q
    |||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||  ||    
T  22191115 gcaaaagtgaccccctatgtttagggaaatatgctcttttgacttcctaacataagggaaatatgccttttgaccccttatctttacaaaaagttacgat 22191214  T
Q  244 tatggcccctttcttggacac 264  Q
    |||| ||| ||| | ||||||    
T  22191215 tatgacccttttttgggacac 22191235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 144 - 260
Target Start/End: Original strand, 15735133 - 15735249
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcat 243  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||| ||||||||||||||||||  ||||||||||||||||||||||||||||   ||    
T  15735133 gcaaaagtgaccccctatgttttgggaaatatgctcttttgacctcgtaacataagggaaatatgtattttgaccccttatctttacaaaaagttgcgat 15735232  T
Q  244 tatggcccctttcttgg 260  Q
    |||||||||||| ||||    
T  15735233 tatggccccttttttgg 15735249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 144 - 260
Target Start/End: Complemental strand, 25299036 - 25298920
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcat 243  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| |||||||| ||||||||| ||||||| |||||||||||||||||||||   ||    
T  25299036 gcaaaagtgaccccctatgtttagggaaatatgctcttttgacctcttaacataaaggaaatatgttttttgatcccttatctttacaaaaagttgcgat 25298937  T
Q  244 tatggcccctttcttgg 260  Q
    |||||||||||| ||||    
T  25298936 tatggccccttttttgg 25298920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 144 - 255
Target Start/End: Original strand, 4587930 - 4588041
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcat 243  Q
    |||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||   ||    
T  4587930 gcaaaagtgaccccctatgtttagggaaatatgctcttttgaccccctaacataagggaaatatgttttttaaccccttatctttacaaaaagttgcgat 4588029  T
Q  244 tatggccccttt 255  Q
    |||| |||||||    
T  4588030 tatgaccccttt 4588041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 148 - 255
Target Start/End: Original strand, 15700820 - 15700927
Alignment:
Q  148 aagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcattatg 247  Q
    |||||||||||||||||| ||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||   ||||||    
T  15700820 aagtgaccccctatgtttcgggaaatatgctcttttgaccccctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgattatg 15700919  T
Q  248 gccccttt 255  Q
     |||||||    
T  15700920 accccttt 15700927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 173 - 260
Target Start/End: Original strand, 17368314 - 17368401
Alignment:
Q  173 tatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcattatggcccctttcttgg 260  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||| ||||    
T  17368314 tatgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgg 17368401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 160 - 252
Target Start/End: Complemental strand, 22387287 - 22387195
Alignment:
Q  160 atgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcattatggcccc 252  Q
    |||||||| ||||||||||| ||||||| ||||||||| | |||||||| ||||||||||||||||| |||||| |||| | |||||||||||    
T  22387287 atgtttagtgaaatatgctcttttgaccccctaacatatgagaaatatgttttttgaccccttatctatacaaagagttgtgattatggcccc 22387195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 144 - 238
Target Start/End: Original strand, 331781 - 331876
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgc-tttttgaccccttatctttacaaaaagtt 238  Q
    ||||||||||||  | |||||||||||||||||||| |||||||  ||||| |||||||||||||| ||||||| || |||||||| |||||||||    
T  331781 gcaaaagtgaccttccatgtttagggaaatatgctcttttgaccctctaacttaagggaaatatgcttttttgatccattatctttgcaaaaagtt 331876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 145 - 238
Target Start/End: Original strand, 2190605 - 2190696
Alignment:
Q  145 caaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgct-ttttgaccccttatctttacaaaaagtt 238  Q
    ||||||||||||   |||||||||||||||||||| |||||||  ||||| ||||| |||||||||  |||| ||||||||||||||||||||||    
T  2190605 caaaagtgaccc---atgtttagggaaatatgctcttttgaccctctaacttaaggaaaatatgctcgtttggccccttatctttacaaaaagtt 2190696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 144 - 238
Target Start/End: Original strand, 36464343 - 36464436
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgct-ttttgaccccttatctttacaaaaagtt 238  Q
    ||||||||||||||  ||||||||||||||||| || ||||||| |||||||||||||||||||  | ||||||| |||||||||  |||||||||    
T  36464343 gcaaaagtgacccc--atgtttagggaaatatgatcttttgaccccctaacataagggaaatataatcttttgactccttatcttctcaaaaagtt 36464436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 145 - 238
Target Start/End: Original strand, 28365581 - 28365673
Alignment:
Q  145 caaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgct-ttttgaccccttatctttacaaaaagtt 238  Q
    ||||||||||||| ||| ||||||||||||||||| ||||||| |||||||| ||||||||||| | |||| ||||||||||||  |||||||||    
T  28365581 caaaagtgacccc-tatatttagggaaatatgctcgtttgacc-cctaacatgagggaaatatgatcttttaaccccttatcttctcaaaaagtt 28365673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 160 - 252
Target Start/End: Complemental strand, 26829308 - 26829216
Alignment:
Q  160 atgtttagggaaatatgctcatttgacctcctaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttatcattatggcccc 252  Q
    ||||||| |||||||||||| || |||| |||||||||||||||||||| | ||||||||||||||| |  ||||||||| | |||||||||||    
T  26829308 atgtttaaggaaatatgctctttggacc-cctaacataagggaaatatgatcttttgaccccttatcatctcaaaaagttgtgattatggcccc 26829216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 163 - 255
Target Start/End: Complemental strand, 4105040 - 4104948
Alignment:
Q  163 tttagggaaatatgctcatttgacctcctaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttatcattatggccccttt 255  Q
    |||||||||||||  || ||||||||| ||||||||||| |||||||| ||||||| |||||| |||||||||||||   |||||| |||||||    
T  4105040 tttagggaaatatattcttttgacctc-taacataaggggaatatgctcttttgacaccttatatttacaaaaagttgcgattatgaccccttt 4104948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 163 - 238
Target Start/End: Original strand, 1020478 - 1020553
Alignment:
Q  163 tttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagtt 238  Q
    |||| |||||||||||  |||||||  |||||||||| |||||||| |||||| ||| |||||||| |||||||||    
T  1020478 tttatggaaatatgctattttgaccctctaacataagagaaatatgatttttgtccctttatcttttcaaaaagtt 1020553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 238
Target Start/End: Complemental strand, 25884412 - 25884318
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgct-ttttgaccccttatctttacaaaaagtt 238  Q
    ||||||||||||||| |||||||| |||||||| |  ||| | | |||||||||||||||||||| | |||| ||||||||||||  |||||||||    
T  25884412 gcaaaagtgaccccc-atgtttagagaaatatgttattttaatcccctaacataagggaaatatgatattttaaccccttatcttctcaaaaagtt 25884318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 208
Target Start/End: Original strand, 43301725 - 43301787
Alignment:
Q  145 caaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatg 208  Q
    ||||||||||||| ||||||||||||| |||| || ||||||| |||||| |||||||||||||    
T  43301725 caaaagtgaccccatatgtttagggaagtatgttcttttgacc-cctaacttaagggaaatatg 43301787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 169 - 235
Target Start/End: Original strand, 33199546 - 33199613
Alignment:
Q  169 gaaatatgctcatttgacctcctaacataagggaaatatgct-ttttgaccccttatctttacaaaaa 235  Q
    ||||||||||| |||||||| ||||| | ||||||||||||| ||||| ||  |||||||||||||||    
T  33199546 gaaatatgctcttttgaccttctaactttagggaaatatgctcttttggccttttatctttacaaaaa 33199613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 144 - 185
Target Start/End: Original strand, 15147814 - 15147854
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttga 185  Q
    ||||||||||||||| |||||||||||||||||||| |||||    
T  15147814 gcaaaagtgaccccc-atgtttagggaaatatgctcttttga 15147854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 100; Significance: 2e-49; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 77 - 260
Target Start/End: Complemental strand, 13397977 - 13397794
Alignment:
Q  77 ctaaccttcatttttcgtcttgtaaatttcaaaatgttgcaattttggccctttattnnnnnnnntcgcaaaagtgaccccctatgtttagggaaatatg 176  Q
    |||| ||||| |||||| | | ||| ||||||||| |||||||||||||||  ||||        | |||||||||||||||||||||||||||||||||    
T  13397977 ctaaacttcacttttcgccctctaagtttcaaaatattgcaattttggccccctattaaaaaaaatggcaaaagtgaccccctatgtttagggaaatatg 13397878  T
Q  177 ctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcattatggcccctttcttgg 260  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||| ||||    
T  13397877 ctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatggccccttttttgg 13397794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 144 - 260
Target Start/End: Complemental strand, 15059053 - 15058937
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcat 243  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||    
T  15059053 gcaaaagtgaccccctatgtttagggaaatatgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgat 15058954  T
Q  244 tatggcccctttcttgg 260  Q
    ||| |||||||| ||||    
T  15058953 tatagccccttttttgg 15058937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 144 - 233
Target Start/End: Complemental strand, 41877261 - 41877172
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaa 233  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41877261 gcaaaagtgaccccctatgtttagggaaatatgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaa 41877172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 144 - 255
Target Start/End: Complemental strand, 4433418 - 4433307
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcat 243  Q
    |||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| ||||||| ||||||||||||||||||||||||||||| | ||    
T  4433418 gcaaaagtgaccccctatgtttagggaaatatgctcttttgaccccctaacataaggaaaatatgttttttgaccccttatctttacaaaaagttgtgat 4433319  T
Q  244 tatggccccttt 255  Q
    |||| |||||||    
T  4433318 tatgaccccttt 4433307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 144 - 260
Target Start/End: Original strand, 4357321 - 4357437
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcat 243  Q
    ||||||||||| |||||| ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||   ||    
T  4357321 gcaaaagtgacaccctatatttagggaaatatgctcttttgaccttctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgat 4357420  T
Q  244 tatggcccctttcttgg 260  Q
    |||||||| ||| ||||    
T  4357421 tatggccctttttttgg 4357437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 144 - 260
Target Start/End: Complemental strand, 5304581 - 5304466
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcat 243  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||   ||    
T  5304581 gcaaaagtgacccc-tatgtttagggaaatatgctcttttgacctcctaacataaggaaaatatgctttttgaccccttatctttacaaaaagttgcgat 5304483  T
Q  244 tatggcccctttcttgg 260  Q
    |||||||| ||| ||||    
T  5304482 tatggcccattttttgg 5304466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 144 - 260
Target Start/End: Complemental strand, 13826653 - 13826538
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcat 243  Q
    |||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||    
T  13826653 gcaaaagtgacccc-tatgtttcgggaaatatgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgat 13826555  T
Q  244 tatggcccctttcttgg 260  Q
    ||| |||||||| ||||    
T  13826554 tatagccccttttttgg 13826538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 103 - 238
Target Start/End: Original strand, 41034664 - 41034799
Alignment:
Q  103 tttcaaaatgttgcaattttggccctttattnnnnnnnntcgcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataaggga 202  Q
    ||||||||||||||||||||| ||| |||||        | ||||||||||||||||||| | ||||||||||| || ||||||||||||||||||||||    
T  41034664 tttcaaaatgttgcaattttgaccccttattaaaaaaaatggcaaaagtgaccccctatgctcagggaaatatgatcttttgacctcctaacataaggga 41034763  T
Q  203 aatatgctttttgaccccttatctttacaaaaagtt 238  Q
    |||||||||||||||||||||| |||||||||||||    
T  41034764 aatatgctttttgaccccttatttttacaaaaagtt 41034799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 144 - 238
Target Start/End: Complemental strand, 43793866 - 43793772
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagtt 238  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  43793866 gcaaaagtgaccccatatgtttagggaaatatgctcttttgacctcctaacataagggaaatatgttttttgaccccttatatttacaaaaagtt 43793772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 146 - 235
Target Start/End: Original strand, 2931392 - 2931481
Alignment:
Q  146 aaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaa 235  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  2931392 aaaagtgaccccctatgtttagggaaatatgctcttttgacctcataacataaaggaaatatgctttttgaccccttatctttacaaaaa 2931481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 103 - 238
Target Start/End: Original strand, 25011763 - 25011898
Alignment:
Q  103 tttcaaaatgttgcaattttggccctttattnnnnnnnntcgcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataaggga 202  Q
    |||||||||||||| ||||||||||  ||||        | |||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||     
T  25011763 tttcaaaatgttgcgattttggccccctattaaaaaaaatggcaaaagtgaccccctatgtttagggaaatatgctcttttgaccccctaacataagggg 25011862  T
Q  203 aatatgctttttgaccccttatctttacaaaaagtt 238  Q
     ||||| |||||||||||||||||||||||||||||    
T  25011863 gatatgttttttgaccccttatctttacaaaaagtt 25011898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 145 - 255
Target Start/End: Complemental strand, 9195897 - 9195788
Alignment:
Q  145 caaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcatt 244  Q
    ||||||||||||||||||||||||||||||||||| ||||||| | |||||||||||||||||| |||||||||||||||||||||||||||||   |||    
T  9195897 caaaagtgaccccctatgtttagggaaatatgctcttttgacc-cataacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgatt 9195799  T
Q  245 atggccccttt 255  Q
    ||| |||||||    
T  9195798 atgaccccttt 9195788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 144 - 237
Target Start/End: Original strand, 35475360 - 35475451
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagt 237  Q
    |||||||||||||  ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  35475360 gcaaaagtgaccc--tatgtttagggaaatatgctcttttgacctcctaacataagggaaatatgttttttgaccccttatctttacaaaaagt 35475451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 146 - 238
Target Start/End: Complemental strand, 1588645 - 1588554
Alignment:
Q  146 aaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagtt 238  Q
    |||||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||    
T  1588645 aaaagtgacctcctatgtttagggaaatatgctcttttgacc-cctaacataagggaaatatgttttttgaccccttatctttacaaaaagtt 1588554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 144 - 255
Target Start/End: Original strand, 55780456 - 55780566
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcat 243  Q
    |||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||| ||||||| |||||||||||||||||||||||||||||   ||    
T  55780456 gcaaaagtgaccccctatgtttagggaaatatgctcttttgacc-cctaacctaaggaaaatatgttttttgaccccttatctttacaaaaagttgcgat 55780554  T
Q  244 tatggccccttt 255  Q
    |||| |||||||    
T  55780555 tatgaccccttt 55780566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 144 - 255
Target Start/End: Original strand, 55844636 - 55844746
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcat 243  Q
    |||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||| ||||||| |||||||||||||||||||||||||||||   ||    
T  55844636 gcaaaagtgaccccctatgtttagggaaatatgctcttttgacc-cctaacctaaggaaaatatgttttttgaccccttatctttacaaaaagttgcgat 55844734  T
Q  244 tatggccccttt 255  Q
    |||| |||||||    
T  55844735 tatgaccccttt 55844746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 144 - 260
Target Start/End: Original strand, 27018284 - 27018399
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcat 243  Q
    |||||||||||||  ||||||||||||||||||||| ||||||| ||||||| |||||||||||| |||||||||||||||| ||||||||||||   ||    
T  27018284 gcaaaagtgaccca-tatgtttagggaaatatgctcttttgaccccctaacaaaagggaaatatgttttttgaccccttatccttacaaaaagttgcaat 27018382  T
Q  244 tatggcccctttcttgg 260  Q
    |||||||||||| ||||    
T  27018383 tatggccccttttttgg 27018399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 144 - 255
Target Start/End: Original strand, 52838298 - 52838407
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcat 243  Q
    |||||| |||||||||||||||||| |||||||||| ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||   ||    
T  52838298 gcaaaaatgaccccctatgtttagg-aaatatgctcttttgacctcctaacatacgggaaatatgctttttga-cccttatctttacaaaaagttgcgat 52838395  T
Q  244 tatggccccttt 255  Q
    ||||| ||||||    
T  52838396 tatggtcccttt 52838407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 145 - 260
Target Start/End: Original strand, 4098726 - 4098842
Alignment:
Q  145 caaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttatcat 243  Q
    ||||||||||||||||||||| ||||||||||||| ||||||| |||||||||||||||||||| | |||||||||||||||||  |||||||||   ||    
T  4098726 caaaagtgaccccctatgttttgggaaatatgctcttttgaccccctaacataagggaaatatgatcttttgaccccttatcttctcaaaaagttgcaat 4098825  T
Q  244 tatggcccctttcttgg 260  Q
    || ||||||||| ||||    
T  4098826 taaggccccttttttgg 4098842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 144 - 235
Target Start/End: Complemental strand, 6789193 - 6789102
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaa 235  Q
    |||||||||||||||||||||||||||||||||||  || ||||||||||||| || |||| ||| |||||||||| |||||||||||||||    
T  6789193 gcaaaagtgaccccctatgtttagggaaatatgctgtttcgacctcctaacatgagagaaaaatgttttttgacccgttatctttacaaaaa 6789102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 160 - 260
Target Start/End: Complemental strand, 51291389 - 51291288
Alignment:
Q  160 atgtttagggaaatatgctcatttgacctcctaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttatcattatggcccctttctt 258  Q
    ||||||||||||||||| || ||||||| |||||||||||||||||||| | |||||||||||||||||  ||||||||| | |||||||||||||| ||    
T  51291389 atgtttagggaaatatgttcttttgaccccctaacataagggaaatatgatcttttgaccccttatcttctcaaaaagttgtgattatggcccctttttt 51291290  T
Q  259 gg 260  Q
    ||    
T  51291289 gg 51291288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 144 - 255
Target Start/End: Complemental strand, 19232579 - 19232467
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatg-ctttttgaccccttatctttacaaaaagttatca 242  Q
    |||||||||| ||| ||||||||||||||||||||| ||||||  |||||||||||| |||||||  ||||| |||||||||||||||||||||||   |    
T  19232579 gcaaaagtgatcccatatgtttagggaaatatgctcttttgactccctaacataaggaaaatatgttttttttaccccttatctttacaaaaagttgcga 19232480  T
Q  243 ttatggccccttt 255  Q
    ||||| |||||||    
T  19232479 ttatgaccccttt 19232467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 144 - 247
Target Start/End: Original strand, 45633506 - 45633609
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttatca 242  Q
    ||||||||||| ||||||||||||||||||||||||  |||||| |||||||||| ||||||||||| ||||||||||||||||||  |||||||| | |    
T  45633506 gcaaaagtgactccctatgtttagggaaatatgctctattgaccgcctaacataa-ggaaatatgctcttttgaccccttatcttttaaaaaagttgtga 45633604  T
Q  243 ttatg 247  Q
    |||||    
T  45633605 ttatg 45633609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 165 - 260
Target Start/End: Complemental strand, 2715930 - 2715836
Alignment:
Q  165 tagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcattatggcccctttcttgg 260  Q
    |||||||||||| || ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||   |||||||||| ||| ||||    
T  2715930 tagggaaatatgatcttttgacc-cctaacatatgggaaatatgctttttgaccccttatctttacaaaaagttgcgattatggcccattttttgg 2715836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 145 - 260
Target Start/End: Original strand, 15734469 - 15734583
Alignment:
Q  145 caaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataa-gggaaatatgctttttgaccccttatctttacaaaaagttatcat 243  Q
    |||||||||||| ||||||||||||||||||| || ||||||  |||||||||| ||||||||||| ||||||||| | || ||||||||||||| | ||    
T  15734469 caaaagtgaccctctatgtttagggaaatatgttcttttgac--cctaacataaggggaaatatgccttttgacccgtcatgtttacaaaaagttgtgat 15734566  T
Q  244 tatggcccctttcttgg 260  Q
     ||||||||||| ||||    
T  15734567 aatggccccttttttgg 15734583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 144 - 247
Target Start/End: Original strand, 9397260 - 9397364
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatg-ctttttgaccccttatctttacaaaaagttatca 242  Q
    |||||||||| | || |||| ||||||||||||||| |||||||  ||||||||| |||||||||  ||||| |||| |||||||||||||||||| |||    
T  9397260 gcaaaagtgatctcccatgtatagggaaatatgctcttttgaccctctaacataaaggaaatatgtttttttaaccctttatctttacaaaaagttgtca 9397359  T
Q  243 ttatg 247  Q
    |||||    
T  9397360 ttatg 9397364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 170 - 238
Target Start/End: Original strand, 15795412 - 15795480
Alignment:
Q  170 aaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagtt 238  Q
    |||||||||| ||||| |||||||||||||||||||| |||||||||||  |||||||| |||||||||    
T  15795412 aaatatgctcttttgaactcctaacataagggaaataggctttttgaccttttatcttttcaaaaagtt 15795480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 163 - 260
Target Start/End: Original strand, 23362519 - 23362616
Alignment:
Q  163 tttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcattatggcccctttcttgg 260  Q
    |||||||||||||| || |||||||   |||||||||| |||||||||||||   | |||||||||||||||||||   |||||| ||||||| ||||    
T  23362519 tttagggaaatatgttcttttgaccctttaacataaggaaaatatgctttttagtctcttatctttacaaaaagttgcgattatgaccccttttttgg 23362616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 103 - 187
Target Start/End: Complemental strand, 25618872 - 25618788
Alignment:
Q  103 tttcaaaatgttgcaattttggccctttattnnnnnnnntcgcaaaagtgaccccctatgtttagggaaatatgctcatttgacc 187  Q
    ||||||||||||||||||||| |||  ||||        | ||||||||||||||||| |||||||||||||||||| |||||||    
T  25618872 tttcaaaatgttgcaattttgaccccctattaagaaaaatggcaaaagtgaccccctaagtttagggaaatatgctcttttgacc 25618788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 198 - 264
Target Start/End: Complemental strand, 25618809 - 25618742
Alignment:
Q  198 agggaaatatgct-ttttgaccccttatctttacaaaaagttatcattatggcccctttcttggacac 264  Q
    ||||||||||||| |||||||||||||||||||||||||||    |||||||||||||| | ||||||    
T  25618809 agggaaatatgctcttttgaccccttatctttacaaaaagtggcgattatggcccctttttgggacac 25618742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 145 - 238
Target Start/End: Complemental strand, 6209475 - 6209382
Alignment:
Q  145 caaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgct-ttttgaccccttatctttacaaaaagtt 238  Q
    |||||||||||||  |||||||||||| |||||   ||||||| |||||||||||||||| ||| | || ||||||||||||||  |||||||||    
T  6209475 caaaagtgaccccacatgtttagggaattatgcatttttgacc-cctaacataagggaaaaatgatcttatgaccccttatcttctcaaaaagtt 6209382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 162 - 247
Target Start/End: Complemental strand, 24626438 - 24626352
Alignment:
Q  162 gtttagggaaatatgctcatttgacctcctaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttatcattatg 247  Q
    |||||||||||||||||| ||||||    |||||||||||||||||| | ||||||| |||||||||  ||||||||| | ||||||    
T  24626438 gtttagggaaatatgctcttttgactcaataacataagggaaatatgatcttttgactccttatcttctcaaaaagttgtgattatg 24626352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 160 - 210
Target Start/End: Original strand, 48158681 - 48158731
Alignment:
Q  160 atgtttagggaaatatgctcatttgacctcctaacataagggaaatatgct 210  Q
    ||||||||||||||||| || |||||||  |||||||||||||||||||||    
T  48158681 atgtttagggaaatatgatcttttgaccctctaacataagggaaatatgct 48158731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 163 - 238
Target Start/End: Complemental strand, 43336156 - 43336081
Alignment:
Q  163 tttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagtt 238  Q
    |||||||||||||| || |||||||| ||| | | | ||||||| | | |||||||| ||||||||||||||||||    
T  43336156 tttagggaaatatgttcttttgaccttctatctttatggaaataagatgtttgaccctttatctttacaaaaagtt 43336081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 254
Target Start/End: Complemental strand, 5932028 - 5931986
Alignment:
Q  212 tttgaccccttatctttacaaaaagttatcattatggcccctt 254  Q
    |||| |||| ||||||||||||||||||| |||||||||||||    
T  5932028 tttggccccctatctttacaaaaagttataattatggcccctt 5931986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 99; Significance: 6e-49; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 77 - 255
Target Start/End: Original strand, 61816 - 61994
Alignment:
Q  77 ctaaccttcatttttcgtcttgtaaatttcaaaatgttgcaattttggccctttattnnnnnnnntcgcaaaagtgaccccctatgtttagggaaatatg 176  Q
    |||| ||||| |||||| ||| ||| |||||||||||||| ||||||||||  ||||        | |||||||||||||||||||||||||||||||||    
T  61816 ctaaacttcacttttcgccttctaagtttcaaaatgttgcgattttggccccctattaaaaaaaatggcaaaagtgaccccctatgtttagggaaatatg 61915  T
Q  177 ctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcattatggccccttt 255  Q
    ||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||    
T  61916 ctcttttgacatcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttt 61994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 144 - 260
Target Start/End: Original strand, 19353 - 19467
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcat 243  Q
    |||||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||   ||    
T  19353 gcaaaagtgacccc-tatgtttagggaaatatgctcttttgacc-cctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgat 19450  T
Q  244 tatggcccctttcttgg 260  Q
    |||||||||||| ||||    
T  19451 tatggccccttttttgg 19467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 97; Significance: 9e-48; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 144 - 260
Target Start/End: Complemental strand, 27869430 - 27869314
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcat 243  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||    
T  27869430 gcaaaagtgaccccctatgtttagggaaatatgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgat 27869331  T
Q  244 tatggcccctttcttgg 260  Q
    |||||||||||| ||||    
T  27869330 tatggccccttttttgg 27869314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 77 - 238
Target Start/End: Original strand, 2331016 - 2331176
Alignment:
Q  77 ctaaccttcatttttcgtcttgtaaatttcaaaatgttgcaattttggccctttattnnnnnnnntcgcaaaagtgaccccctatgtttagggaaatatg 176  Q
    |||| ||||| |||||||| | ||| ||| ||||||||||||||||||||| |||||        | |||||||||||||||||||||||||||||||||    
T  2331016 ctaaacttcacttttcgtcctctaagttttaaaatgttgcaattttggccccttattaaaaaaa-tggcaaaagtgaccccctatgtttagggaaatatg 2331114  T
Q  177 ctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagtt 238  Q
    ||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  2331115 ctcttttgacctcctaacataagggaaatatgctttttgactccttatctttacaaaaagtt 2331176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 144 - 260
Target Start/End: Complemental strand, 19195448 - 19195332
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcat 243  Q
    ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | ||    
T  19195448 gcaaaagtgaccccctatgtttagggaaatacgctcttttgacctcctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgtgat 19195349  T
Q  244 tatggcccctttcttgg 260  Q
    |||||||||||| ||||    
T  19195348 tatggccccttttttgg 19195332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 144 - 260
Target Start/End: Original strand, 20636688 - 20636804
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcat 243  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||    
T  20636688 gcaaaagtgaccccctatgtttagggaaatatgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgat 20636787  T
Q  244 tatggcccctttcttgg 260  Q
    |||| ||||||| ||||    
T  20636788 tatgaccccttttttgg 20636804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 144 - 260
Target Start/End: Complemental strand, 35337757 - 35337641
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcat 243  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||    
T  35337757 gcaaaagtgaccccctatgtttagggaaatatgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgat 35337658  T
Q  244 tatggcccctttcttgg 260  Q
    |||| ||||||| ||||    
T  35337657 tatgaccccttttttgg 35337641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 144 - 251
Target Start/End: Complemental strand, 21224587 - 21224480
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcat 243  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||    
T  21224587 gcaaaagtgaccccctatgtttagggaaatatgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgat 21224488  T
Q  244 tatggccc 251  Q
    ||||||||    
T  21224487 tatggccc 21224480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 144 - 238
Target Start/End: Original strand, 20638560 - 20638654
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagtt 238  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20638560 gcaaaagtgaccccctatgtttagggaaatatgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagtt 20638654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 82 - 255
Target Start/End: Complemental strand, 3562729 - 3562557
Alignment:
Q  82 cttcatttttcgtcttgtaaatttcaaaatgttgcaattttggccctttattnnnnnnnntcgcaaaagtgaccccctatgtttagggaaatatgctcat 181  Q
    ||||| |||||||| | ||| |||||||||||| | ||||||||||  ||||        | |||||||||||||| ||||||||||||||||||||| |    
T  3562729 cttcacttttcgtcctctaagtttcaaaatgttacgattttggccccctattaaaaaaaatggcaaaagtgacccc-tatgtttagggaaatatgctctt 3562631  T
Q  182 ttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcattatggccccttt 255  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||    
T  3562630 ttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatggccccttt 3562557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 144 - 261
Target Start/End: Original strand, 42271401 - 42271518
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcat 243  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||   ||    
T  42271401 gcaaaagtgaccccctatgtttagggaaatatgctcttttgacctcctaacataagggaaatatgctttttgaccccttatgtttacaaaaagttgcgat 42271500  T
Q  244 tatggcccctttcttgga 261  Q
    |||||||| ||| |||||    
T  42271501 tatggccctttttttgga 42271518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 84 - 260
Target Start/End: Complemental strand, 41452544 - 41452368
Alignment:
Q  84 tcatttttcgtcttgtaaatttcaaaatgttgcaattttggccctttattnnnnnnnntcgcaaaagtgaccccctatgtttagggaaatatgctcattt 183  Q
    |||||||||||| | ||| ||||||||||||| |||||||||||  ||||        | |||||||||||||| ||||||||||||||||| ||| | |    
T  41452544 tcatttttcgtcctctaagtttcaaaatgttgtaattttggccccctattaaaaaaaatggcaaaagtgaccccttatgtttagggaaatatactcttct 41452445  T
Q  184 gacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcattatggcccctttcttgg 260  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||||| ||||||| ||||    
T  41452444 gacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatgaccccttttttgg 41452368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 144 - 254
Target Start/End: Complemental strand, 24597750 - 24597640
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcat 243  Q
    |||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||   ||    
T  24597750 gcaaaagtaaccccctatgtttagggaaatatgctcttttgacctcctaacataagggaaatatgttttttgaccccttctctttacaaaaagttgcgat 24597651  T
Q  244 tatggcccctt 254  Q
    |||||||||||    
T  24597650 tatggcccctt 24597640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 144 - 255
Target Start/End: Original strand, 8526865 - 8526975
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcat 243  Q
    |||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||   ||    
T  8526865 gcaaaaatgaccccctatgtttaggaaaatatgctcatttgacctcctaacataagggaaatatgctttttgacccc-tatttttacaaaaagttgcaat 8526963  T
Q  244 tatggccccttt 255  Q
    ||||||||||||    
T  8526964 tatggccccttt 8526975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 144 - 261
Target Start/End: Original strand, 31493980 - 31494096
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcat 243  Q
    |||||||||||||| ||||||||||||||||||||| |||||||  ||||||||||| |||||||||||||||||||||||||||||||||||||   ||    
T  31493980 gcaaaagtgacccc-tatgtttagggaaatatgctcttttgaccctctaacataaggaaaatatgctttttgaccccttatctttacaaaaagttgcgat 31494078  T
Q  244 tatggcccctttcttgga 261  Q
    |||||||||||| |||||    
T  31494079 tatggccccttttttgga 31494096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 144 - 252
Target Start/End: Original strand, 17305834 - 17305941
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcat 243  Q
    |||||||||||||| |||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| | ||    
T  17305834 gcaaaagtgacccc-tatgtttaggaaaatatgctcttttgacctcctaacataagggaaatatgctttttgaccccttatttttacaaaaagttgtgat 17305932  T
Q  244 tatggcccc 252  Q
    |||| ||||    
T  17305933 tatgacccc 17305941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 144 - 255
Target Start/End: Complemental strand, 11843412 - 11843302
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcat 243  Q
    |||||||||||| ||||||||||||||||||||||| ||||||| |||||||||||| |||||||||||||||||||||||| ||||||||||||   ||    
T  11843412 gcaaaagtgacctcctatgtttagggaaatatgctcttttgacc-cctaacataaggaaaatatgctttttgaccccttatccttacaaaaagttgcaat 11843314  T
Q  244 tatggccccttt 255  Q
    ||||||||||||    
T  11843313 tatggccccttt 11843302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 144 - 260
Target Start/End: Complemental strand, 19919836 - 19919722
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcat 243  Q
    ||||||||||||||| ||||||||| |||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| | ||    
T  19919836 gcaaaagtgaccccc-atgtttagg-aaatatgctcttttgacctcctaacataaggaaaatatgttttttgaccccttatctttacaaaaagttgtgat 19919739  T
Q  244 tatggcccctttcttgg 260  Q
    ||| |||||||| ||||    
T  19919738 tatagccccttttttgg 19919722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 144 - 260
Target Start/End: Complemental strand, 36746738 - 36746622
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcat 243  Q
    |||||||| |||| |||||||||||||||||||||| ||||||||||||||||||| ||||||||| |||| |||||||||||||||||||||||   ||    
T  36746738 gcaaaagtaacccactatgtttagggaaatatgctcttttgacctcctaacataagagaaatatgccttttaaccccttatctttacaaaaagttgcgat 36746639  T
Q  244 tatggcccctttcttgg 260  Q
    |||| ||||||| ||||    
T  36746638 tatgaccccttttttgg 36746622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 103 - 255
Target Start/End: Complemental strand, 48176238 - 48176087
Alignment:
Q  103 tttcaaaatgttgcaattttggccctttattnnnnnnnntcgcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataaggga 202  Q
    |||||||||||||| ||||||||||  ||||        | |||||||| || |||||||||||||||||||||||| ||||||| ||||||||||||||    
T  48176238 tttcaaaatgttgcgattttggccccctattaaaaaaaatggcaaaagtaactccctatgtttagggaaatatgctcttttgacc-cctaacataaggga 48176140  T
Q  203 aatatgctttttgaccccttatctttacaaaaagttatcattatggccccttt 255  Q
    |||||| |||||||||||||||||||||||||||||   |||||| |||||||    
T  48176139 aatatgttttttgaccccttatctttacaaaaagttgcgattatgaccccttt 48176087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 103 - 261
Target Start/End: Complemental strand, 13578060 - 13577904
Alignment:
Q  103 tttcaaaatgttgcaattttggccctttattnnnnnnnntcgcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataaggga 202  Q
    |||||||||||||| |||||| |||| ||||        | |||||||||||||| |||||||| |||||||||||| ||||||| ||||||||||||||    
T  13578060 tttcaaaatgttgcgattttgaccctctattaaaaaaaatggcaaaagtgacccc-tatgtttaaggaaatatgctcttttgacc-cctaacataaggga 13577963  T
Q  203 aatatgctttttgaccccttatctttacaaaaagttatcattatggcccctttcttgga 261  Q
    ||||||||||||||||| |||||| |||||||||||   |||||||||||||| |||||    
T  13577962 aatatgctttttgaccctttatctatacaaaaagttgaaattatggccccttttttgga 13577904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 144 - 234
Target Start/End: Complemental strand, 18754501 - 18754411
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaa 234  Q
    |||||||||| || |||||||||||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  18754501 gcaaaagtgatcctctatgtttagggaaatatgctcttttgaccccctaacataagggaaatatgttttttgaccccttatctttacaaaa 18754411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 153 - 264
Target Start/End: Complemental strand, 10024010 - 10023899
Alignment:
Q  153 accccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcattatggcccc 252  Q
    ||||||||||||||||||||||||||| ||||||| ||| |||||||| ||||||  |||||||||||||||||||||||||||||   | |||||||||    
T  10024010 accccctatgtttagggaaatatgctcttttgacccccttacataaggaaaatattttttttgaccccttatctttacaaaaagttgcgaatatggcccc 10023911  T
Q  253 tttcttggacac 264  Q
    ||| | ||||||    
T  10023910 tttttgggacac 10023899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 160 - 235
Target Start/End: Complemental strand, 44078090 - 44078015
Alignment:
Q  160 atgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaa 235  Q
    |||||||||||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  44078090 atgtttagggaaatatgctcttttgacctcctaacataagagaaatatgttttttgaccccttatctttacaaaaa 44078015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 144 - 238
Target Start/End: Complemental strand, 21225782 - 21225689
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagtt 238  Q
    ||||||| ||||| |||||||||||||||||||||| ||||||| |||||||||||||||||||||| ||||||||||  |||||||||||||||    
T  21225782 gcaaaagcgaccctctatgtttagggaaatatgctcttttgacc-cctaacataagggaaatatgctatttgacccctcgtctttacaaaaagtt 21225689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 160 - 260
Target Start/End: Original strand, 14624688 - 14624787
Alignment:
Q  160 atgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcattatggcccctttcttg 259  Q
    ||||||||| |||||||||| ||||||| | ||||||||||||||||| ||||||||||| ||||||||||||||||||   |||||||||||||| |||    
T  14624688 atgtttaggaaaatatgctcttttgacc-cataacataagggaaatatactttttgaccctttatctttacaaaaagttgcaattatggccccttttttg 14624786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 167 - 255
Target Start/End: Complemental strand, 24448256 - 24448167
Alignment:
Q  167 gggaaatatgctcatttgacctcctaacataagggaaatatgctttt-tgaccccttatctttacaaaaagttatcattatggccccttt 255  Q
    ||||||||||||  ||||||| |||||||||||||||||||| |||| ||||||||||||||||||||||  | | ||||||||||||||    
T  24448256 gggaaatatgcttttttgaccccctaacataagggaaatatgtttttatgaccccttatctttacaaaaaaatgtgattatggccccttt 24448167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 145 - 255
Target Start/End: Original strand, 4193621 - 4193730
Alignment:
Q  145 caaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttatcat 243  Q
    ||||||||||||| |  |||||||||||||||||| ||||||| | ||||||||| |||||||| | |||||||||||||||||| |||||||||   ||    
T  4193621 caaaagtgacccc-tgcgtttagggaaatatgctcttttgacc-cttaacataagagaaatatgatcttttgaccccttatcttttcaaaaagttgcaat 4193718  T
Q  244 tatggccccttt 255  Q
    ||||||||||||    
T  4193719 tatggccccttt 4193730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 146 - 255
Target Start/End: Original strand, 5111512 - 5111619
Alignment:
Q  146 aaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttatcatt 244  Q
    ||||||||||||  ||||||||| ||||||| || ||||||| |||||||||||||||||||| | |||||||||||||||||  |||||||||   |||    
T  5111512 aaaagtgacccc--atgtttaggaaaatatgttcttttgacc-cctaacataagggaaatatgatattttgaccccttatcttctcaaaaagttgcgatt 5111608  T
Q  245 atggccccttt 255  Q
    |||||||||||    
T  5111609 atggccccttt 5111619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 107 - 238
Target Start/End: Original strand, 10655362 - 10655492
Alignment:
Q  107 aaaatgttgcaattttggccctttattnnnnnnnntcgcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaata 206  Q
    ||||||||||| ||||||||| |||||        | |||||| ||| ||||||||||||||||||||||||| ||| | | ||||| ||||| ||||||    
T  10655362 aaaatgttgcagttttggccccttattaaaaaaaattgcaaaaatgatcccctatgtttagggaaatatgctcttttaatcccctaatataagagaaata 10655461  T
Q  207 tgctttttgaccccttatctttacaaaaagtt 238  Q
    |  ||||| |||||||||||||||||||||||    
T  10655462 t-ttttttaaccccttatctttacaaaaagtt 10655492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 160 - 253
Target Start/End: Original strand, 26126339 - 26126432
Alignment:
Q  160 atgtttagggaaatatgctcatttgacctcctaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttatcattatggcccct 253  Q
    |||||||||||||||||||  ||||||| |||||||||||||||||||| | |||||||||||||||||  |||||||||   ||||||||||||    
T  26126339 atgtttagggaaatatgcttttttgacc-cctaacataagggaaatatgatcttttgaccccttatcttctcaaaaagttgcgattatggcccct 26126432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 144 - 227
Target Start/End: Original strand, 24464646 - 24464728
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgct-ttttgaccccttatctt 227  Q
    |||| |||||||||  ||||||||||||||||| || ||||||| |||||||||||||||||||| | |||||||||||||||||    
T  24464646 gcaagagtgacccc--atgtttagggaaatatgttcttttgaccccctaacataagggaaatatgatcttttgaccccttatctt 24464728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 144 - 238
Target Start/End: Complemental strand, 4571577 - 4571484
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgct-ttttgaccccttatctttacaaaaagtt 238  Q
    |||||||||||||   |||||||||||||||||||| ||| ||| | |||||||||||||||||| | |||||||||||||||||  |||||||||    
T  4571577 gcaaaagtgaccca--atgtttagggaaatatgctctttttaccccataacataagggaaatatgatcttttgaccccttatcttctcaaaaagtt 4571484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 160 - 219
Target Start/End: Complemental strand, 6798133 - 6798074
Alignment:
Q  160 atgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccc 219  Q
    |||||||||||||||||||| |||||||  ||||||||||||||||||| ||||||||||    
T  6798133 atgtttagggaaatatgctcttttgaccctctaacataagggaaatatgatttttgaccc 6798074  T

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Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 144 - 238
Target Start/End: Original strand, 39182006 - 39182097
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgct-ttttgaccccttatctttacaaaaagtt 238  Q
    |||||| |||||||  |||||||||||||||||||| ||||||  | |||||||||||||||||| | |||||||||||||||||  |||||||||    
T  39182006 gcaaaaatgacccc--atgtttagggaaatatgctcttttgac--cataacataagggaaatatgatcttttgaccccttatcttctcaaaaagtt 39182097  T

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Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 145 - 224
Target Start/End: Complemental strand, 3403286 - 3403206
Alignment:
Q  145 caaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgct-ttttgaccccttat 224  Q
    |||||||||||||  |||| |||| |||||||||| ||||||| |||||||||||||||||||| | |||||| |||||||    
T  3403286 caaaagtgacccctcatgtataggaaaatatgctcttttgaccccctaacataagggaaatatgatcttttgatcccttat 3403206  T

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Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 144 - 251
Target Start/End: Original strand, 26385330 - 26385437
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttatca 242  Q
    |||||||||||||   |||||||||||||||||||  ||||||| ||||||||||| |||||||| | |||||||| ||||||||  |||||||||   |    
T  26385330 gcaaaagtgacccatcatgtttagggaaatatgctattttgacc-cctaacataagagaaatatgatattttgacctcttatcttctcaaaaagttgcga 26385428  T
Q  243 ttatggccc 251  Q
    |||||||||    
T  26385429 ttatggccc 26385437  T

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Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 160 - 235
Target Start/End: Original strand, 3769489 - 3769564
Alignment:
Q  160 atgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaa 235  Q
    |||||||| ||||||||||  ||||||| | ||||||| | |||||||||||||||| | ||||||||||||||||    
T  3769489 atgtttagagaaatatgcttttttgaccccttaacatatgagaaatatgctttttgatctcttatctttacaaaaa 3769564  T

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Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 172 - 238
Target Start/End: Complemental strand, 39440328 - 39440261
Alignment:
Q  172 atatgctcatttgacctcctaacataagggaaatatgct-ttttgaccccttatctttacaaaaagtt 238  Q
    ||||| || |||||||||||||||||||||||||||| | |||||| ||||||||||| |||||||||    
T  39440328 atatgatcttttgacctcctaacataagggaaatatgatcttttgatcccttatcttttcaaaaagtt 39440261  T

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Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 15681682 - 15681743
Alignment:
Q  160 atgtttagggaaatatgctcatttgacctcctaacataagggaaatatgct-ttttgacccc 220  Q
    |||||||||||||||||||| ||||||| ||||||||||||||| |||| | ||||||||||    
T  15681682 atgtttagggaaatatgctcttttgaccccctaacataagggaactatgatcttttgacccc 15681743  T

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Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 144 - 227
Target Start/End: Original strand, 25002778 - 25002859
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgct-ttttgaccccttatctt 227  Q
    |||||| |||||||  ||||||||||||| |||||| ||||||| |||||||||| ||||||||| | |||||||||||||||||    
T  25002778 gcaaaaatgacccc--atgtttagggaaacatgctcttttgacc-cctaacataaaggaaatatgatcttttgaccccttatctt 25002859  T

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Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 238
Target Start/End: Complemental strand, 9157269 - 9157191
Alignment:
Q  160 atgtttagggaaatatgctcatttgacctcctaacataagggaaatatgct-ttttgaccccttatctttacaaaaagtt 238  Q
    ||||||||| |||||||||| ||||||| ||||||||||| |||||||| | |||||||| ||||||||  |||||||||    
T  9157269 atgtttaggaaaatatgctcttttgacc-cctaacataagtgaaatatgatcttttgaccacttatcttctcaaaaagtt 9157191  T

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Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 260
Target Start/End: Original strand, 15681720 - 15681815
Alignment:
Q  166 agggaaatatgctcatttgacctcctaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttatcattatggcccctttcttgg 260  Q
    |||||| |||| || ||||||| ||||||||||||||| |||| | |||||||||||||||||  |||||||||   ||||||||| |||| ||||    
T  15681720 agggaactatgatcttttgaccccctaacataagggaactatgatcttttgaccccttatcttgtcaaaaagttgcgattatggcctcttttttgg 15681815  T

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Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 238
Target Start/End: Original strand, 23439662 - 23439757
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgct-ttttgaccccttatctttacaaaaagtt 238  Q
    ||||||||||| ||| ||||||| ||||||||| |  ||||||   ||||| ||||||||||||||| |||||| |||||||||||  ||||||||    
T  23439662 gcaaaagtgactccccatgtttaaggaaatatgatattttgactctctaacttaagggaaatatgctcttttgatcccttatcttttaaaaaagtt 23439757  T

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Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 235
Target Start/End: Original strand, 3148008 - 3148084
Alignment:
Q  160 atgtttagggaaatatgctcatttgacctcctaacataagggaaatatgct-ttttgaccccttatctttacaaaaa 235  Q
    ||||||||||| |||||||| ||||| | ||||| |||| |||||||||||  |||||||| ||| |||||||||||    
T  3148008 atgtttagggatatatgctcttttgatcccctaaaataatggaaatatgctcctttgaccctttaactttacaaaaa 3148084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 264
Target Start/End: Complemental strand, 9822296 - 9822214
Alignment:
Q  183 tgacctcctaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttatcattatggcccctttcttggacac 264  Q
    ||||| |||||||||||||||||| | | |||||||||||||||||  |||||||||   |||||| ||||||| | ||||||    
T  9822296 tgaccccctaacataagggaaatacgatcttttgaccccttatcttctcaaaaagttgcgattatgacccctttttgggacac 9822214  T

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Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 264
Target Start/End: Complemental strand, 10724221 - 10724139
Alignment:
Q  183 tgacctcctaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttatcattatggcccctttcttggacac 264  Q
    ||||| |||||||||||||||||| | | |||||||||||||||||  |||||||||   |||||| ||||||| | ||||||    
T  10724221 tgaccccctaacataagggaaatacgatcttttgaccccttatcttctcaaaaagttgcgattatgacccctttttgggacac 10724139  T

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Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 237
Target Start/End: Original strand, 19493391 - 19493481
Alignment:
Q  145 caaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatg-ctttttgaccccttatctttacaaaaagt 237  Q
    |||||||||||||  ||||||| |||||||||||  ||||||| || ||||||||| |||||||  |||||||||| |||||||  ||||||||    
T  19493391 caaaagtgacccc--atgtttatggaaatatgctattttgacc-ccaaacataaggaaaatatgattttttgaccctttatcttctcaaaaagt 19493481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 238
Target Start/End: Original strand, 29051704 - 29051781
Alignment:
Q  160 atgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagtt 238  Q
    ||||||||  |||||||||| ||||||| | ||| ||||| |||| ||| ||||||||||||||||||  |||||||||    
T  29051704 atgtttagaaaaatatgctcctttgacc-cataatataagagaaaaatgatttttgaccccttatcttctcaaaaagtt 29051781  T

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Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 198 - 253
Target Start/End: Original strand, 6650632 - 6650688
Alignment:
Q  198 agggaaatatgct-ttttgaccccttatctttacaaaaagttatcattatggcccct 253  Q
    ||||||||||||| |||||||||||||||||  |||||||||   ||||||||||||    
T  6650632 agggaaatatgctcttttgaccccttatcttctcaaaaagttgcgattatggcccct 6650688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 239
Target Start/End: Original strand, 43251349 - 43251429
Alignment:
Q  160 atgtttagggaaatatgctcatttgacctcctaacataagggaaatatgct-ttttgaccccttatctttacaaaaagtta 239  Q
    ||||||||| |||| | ||| |||||||  ||||||||||||||||||| | ||||||| | |||||||  ||||||||||    
T  43251349 atgtttaggaaaatgtactcttttgaccctctaacataagggaaatatgatcttttgactctttatcttctcaaaaagtta 43251429  T

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Target: chr1 (Bit Score: 97; Significance: 9e-48; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 144 - 260
Target Start/End: Original strand, 24962022 - 24962138
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcat 243  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||    
T  24962022 gcaaaagtgaccccctatgtttagggaaatatgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgat 24962121  T
Q  244 tatggcccctttcttgg 260  Q
    |||||||||||| ||||    
T  24962122 tatggccccttttttgg 24962138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 103 - 260
Target Start/End: Original strand, 24196289 - 24196446
Alignment:
Q  103 tttcaaaatgttgcaattttggccctttattnnnnnnnntcgcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataaggga 202  Q
    |||||||||||||| ||||||||||| ||||        | |||||||||||||| ||||||||| ||||||||||| ||||||||||||||||||||||    
T  24196289 tttcaaaatgttgcgattttggccctctattaaaaaaaatggcaaaagtgaccccatatgtttagagaaatatgctcttttgacctcctaacataaggga 24196388  T
Q  203 aatatgctttttgaccccttatctttacaaaaagttatcattatggcccctttcttgg 260  Q
    ||||||||||||||||||||||||||||||||||||   | |||||||||||| ||||    
T  24196389 aatatgctttttgaccccttatctttacaaaaagttgcgaatatggccccttttttgg 24196446  T

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Target: chr1; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 144 - 261
Target Start/End: Original strand, 24749867 - 24749984
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcat 243  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||   ||    
T  24749867 gcaaaagtgaccccctatgtttagggaaatatgctcttttgacctcataacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgat 24749966  T
Q  244 tatggcccctttcttgga 261  Q
    |||||||| ||| |||||    
T  24749967 tatggcccattttttgga 24749984  T

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Target: chr1; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 103 - 255
Target Start/End: Complemental strand, 46432492 - 46432340
Alignment:
Q  103 tttcaaaatgttgcaattttggccctttattnnnnnnnntcgcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataaggga 202  Q
    |||||||||||||| ||||||||||  ||||        | |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  46432492 tttcaaaatgttgcgattttggccccctattaaaaaaaatggcaaaagtgaccccctatgtttagggaaatatgctcttttgaccccctaacataaggga 46432393  T
Q  203 aatatgctttttgaccccttatctttacaaaaagttatcattatggccccttt 255  Q
    |||||| |||||||||||||||||||||||||||||   |||||| |||||||    
T  46432392 aatatgttttttgaccccttatctttacaaaaagttgcgattatgaccccttt 46432340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 144 - 260
Target Start/End: Complemental strand, 48472098 - 48471982
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcat 243  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||   ||    
T  48472098 gcaaaattgaccccctatgtttagggaaatatgctcttttgacctcctaacataagagaaatatgctttttgaccccttatctttacaaaaagttgcgat 48471999  T
Q  244 tatggcccctttcttgg 260  Q
    ||||| |||||| ||||    
T  48471998 tatggtcccttttttgg 48471982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 77 - 260
Target Start/End: Original strand, 3616801 - 3616984
Alignment:
Q  77 ctaaccttcatttttcgtcttgtaaatttcaaaatgttgcaattttggccctttattnnnnnnnntcgcaaaagtgaccccctatgtttagggaaatatg 176  Q
    |||| ||||| |||||| | | ||| |||||||||||||| ||||||||||  ||||        | |||||||||||| ||||||||||||||||||||    
T  3616801 ctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttggccccctattaaaaaaaatggcaaaagtgacctcctatgtttagggaaatatg 3616900  T
Q  177 ctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcattatggcccctttcttgg 260  Q
    ||| ||||||||| | |||||||||||||||| |||||||||||||||||||||||||||||   |||||||||||||| ||||    
T  3616901 ctcttttgacctcttcacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgattatggccccttttttgg 3616984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 144 - 260
Target Start/End: Complemental strand, 19078159 - 19078044
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcat 243  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||   ||    
T  19078159 gcaaaagtgacccc-tatgtttagggaaatatgctcttttgacctcctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgat 19078061  T
Q  244 tatggcccctttcttgg 260  Q
    |||| ||||||| ||||    
T  19078060 tatgaccccttttttgg 19078044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 144 - 260
Target Start/End: Complemental strand, 19126049 - 19125934
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcat 243  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||   ||    
T  19126049 gcaaaagtgacccc-tatgtttagggaaatatgctcttttgacctcctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgat 19125951  T
Q  244 tatggcccctttcttgg 260  Q
    |||| ||||||| ||||    
T  19125950 tatgaccccttttttgg 19125934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 77 - 260
Target Start/End: Original strand, 29676081 - 29676264
Alignment:
Q  77 ctaaccttcatttttcgtcttgtaaatttcaaaatgttgcaattttggccctttattnnnnnnnntcgcaaaagtgaccccctatgtttagggaaatatg 176  Q
    |||| ||||| |||||| | | ||| ||||||||||||||||||| |||||  ||||        | |||||||||| ||||||||||||||||||||||    
T  29676081 ctaaacttcacttttcgccctctaagtttcaaaatgttgcaatttaggccccatattaaaaagaatagcaaaagtgatcccctatgtttagggaaatatg 29676180  T
Q  177 ctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcattatggcccctttcttgg 260  Q
    ||| | ||| ||||||||||||| ||||||||||||||||||||||||||||| ||||||||   |||||||||||||| ||||    
T  29676181 ctcttgtgatctcctaacataagtgaaatatgctttttgaccccttatctttataaaaagttgcgattatggccccttttttgg 29676264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 144 - 238
Target Start/End: Complemental strand, 4059757 - 4059663
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagtt 238  Q
    ||||||||||||| |||||||||||||||||||||| |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  4059757 gcaaaagtgaccctctatgtttagggaaatatgctcttttgacctcctaacataaggaaaatatgttttttgaccccttatctttacaaaaagtt 4059663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 144 - 255
Target Start/End: Complemental strand, 43706888 - 43706778
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcat 243  Q
    |||||||||||||||||||||||||||||||||||| ||||||| | |||||||||||||||||| |||||||||||||||||||||||||||||   ||    
T  43706888 gcaaaagtgaccccctatgtttagggaaatatgctcttttgacc-cataacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgat 43706790  T
Q  244 tatggccccttt 255  Q
    |||| |||||||    
T  43706789 tatgaccccttt 43706778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 103 - 237
Target Start/End: Complemental strand, 28920927 - 28920799
Alignment:
Q  103 tttcaaaatgttgcaattttggccctttattnnnnnnnntcgcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataaggga 202  Q
    |||||||||||||| ||||||||||  ||||        | |||||||||||||||||||||||||||||||||||| ||||||||||||||||          
T  28920927 tttcaaaatgttgcgattttggccccctattaaaaaaaatggcaaaagtgaccccctatgtttagggaaatatgctcttttgacctcctaacat------ 28920834  T
Q  203 aatatgctttttgaccccttatctttacaaaaagt 237  Q
    |||||||||||||||||||||||||||||||||||    
T  28920833 aatatgctttttgaccccttatctttacaaaaagt 28920799  T

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Target: chr1; HSP #13
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 144 - 255
Target Start/End: Complemental strand, 51719356 - 51719246
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcat 243  Q
    |||||||||||||| ||||||||||||||||||||| ||||| | |||||||||||| ||||||| ||||| |||||||||||||||||||||||   ||    
T  51719356 gcaaaagtgaccccttatgtttagggaaatatgctcttttgatcccctaacataaggaaaatatg-ttttttaccccttatctttacaaaaagttgcgat 51719258  T
Q  244 tatggccccttt 255  Q
    |||| |||||||    
T  51719257 tatgaccccttt 51719246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 161 - 261
Target Start/End: Complemental strand, 27093070 - 27092970
Alignment:
Q  161 tgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcattatggcccctttcttgg 260  Q
    ||||||||||||||||||| ||||||| ||||| ||| | |||||||| |||||||||||||||||||||||||||||   |||||||||||||| ||||    
T  27093070 tgtttagggaaatatgctcttttgaccccctaatatatgtgaaatatgttttttgaccccttatctttacaaaaagttgcaattatggccccttttttgg 27092971  T
Q  261 a 261  Q
    |    
T  27092970 a 27092970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 145 - 222
Target Start/End: Original strand, 21148048 - 21148126
Alignment:
Q  145 caaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgct-ttttgacccctt 222  Q
    ||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| | ||||||||||||    
T  21148048 caaaagtgaccccctatgtttagggaaatatgctcttttgaccccctaacataagggaaatatgatcttttgacccctt 21148126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 144 - 247
Target Start/End: Complemental strand, 2657747 - 2657644
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttatca 242  Q
    ||||||||||| ||||||||||||||||||||||||  |||||| |||||||||| ||||||||||| ||||||||||||||||||  |||||||| | |    
T  2657747 gcaaaagtgactccctatgtttagggaaatatgctctattgaccgcctaacataa-ggaaatatgctcttttgaccccttatcttttaaaaaagttgtga 2657649  T
Q  243 ttatg 247  Q
    |||||    
T  2657648 ttatg 2657644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 144 - 251
Target Start/End: Complemental strand, 16551879 - 16551771
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttatca 242  Q
    ||||||||||||||| |||||||||||||||||||| ||||||| |||||||| ||  ||||||| | |||||||||||||||||  |||||||||   |    
T  16551879 gcaaaagtgacccccaatgtttagggaaatatgctcttttgaccccctaacatcagacaaatatgatcttttgaccccttatcttctcaaaaagttgcga 16551780  T
Q  243 ttatggccc 251  Q
    |||||||||    
T  16551779 ttatggccc 16551771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 145 - 227
Target Start/End: Complemental strand, 29182234 - 29182152
Alignment:
Q  145 caaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgct-ttttgaccccttatctt 227  Q
    ||||||||||||| ||||||||| ||||||||||| ||||||| |||||||||||||||||||| | |||||||||||||||||    
T  29182234 caaaagtgaccccttatgtttagagaaatatgctcttttgacc-cctaacataagggaaatatgatcttttgaccccttatctt 29182152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 146 - 238
Target Start/End: Complemental strand, 31084844 - 31084753
Alignment:
Q  146 aaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagtt 238  Q
    |||||||||||| ||| |||| ||||||||  |  ||||||| ||||||||| || |||||||||||||||||||||||||||||||||||||    
T  31084844 aaaagtgacccc-tatttttatggaaatataatattttgaccccctaacatatggaaaatatgctttttgaccccttatctttacaaaaagtt 31084753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 144 - 238
Target Start/End: Original strand, 2425294 - 2425387
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatg-ctttttgaccccttatctttacaaaaagtt 238  Q
    |||||||||||||| ||||||||||||| ||||||| |||||||  |||||||||||||||||||  ||||| | |||||||||||||||||||||    
T  2425294 gcaaaagtgacccc-tatgtttagggaa-tatgctcttttgaccctctaacataagggaaatatgttttttttaacccttatctttacaaaaagtt 2425387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 144 - 238
Target Start/End: Original strand, 22786099 - 22786193
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgct-ttttgaccccttatctttacaaaaagtt 238  Q
    |||||||||| |||| |||||||||||||||||||| |||||| | |||||||||| |||||||| | |||||||||||||||||  |||||||||    
T  22786099 gcaaaagtgagcccccatgtttagggaaatatgctcttttgacat-ctaacataagtgaaatatgatcttttgaccccttatcttctcaaaaagtt 22786193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 145 - 238
Target Start/End: Complemental strand, 4455277 - 4455183
Alignment:
Q  145 caaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatg-ctttttgaccccttatctttacaaaaagtt 238  Q
    ||||||||| |||| ||||||||| |||||||||| ||||||| | ||||||||||||||||||  ||||||||| ||||||||  |||||||||    
T  4455277 caaaagtgatccccaatgtttaggaaaatatgctcttttgaccccgtaacataagggaaatatgattttttgaccacttatcttctcaaaaagtt 4455183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 160 - 238
Target Start/End: Original strand, 47685186 - 47685264
Alignment:
Q  160 atgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagtt 238  Q
    ||||||| |||||||||||  ||||| | |||||||||||| ||||||| |||||||||||||| ||||||||||||||    
T  47685186 atgtttaaggaaatatgctattttgatcccctaacataaggaaaatatgttttttgaccccttacctttacaaaaagtt 47685264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 146 - 238
Target Start/End: Complemental strand, 18606917 - 18606824
Alignment:
Q  146 aaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgct-ttttgaccccttatctttacaaaaagtt 238  Q
    ||||||||||||  |||||||||||||||||||| ||||||| | |||||||||| ||||| | | |||||||||||||||||  |||||||||    
T  18606917 aaaagtgacccctcatgtttagggaaatatgctcttttgaccccataacataaggaaaatacgatcttttgaccccttatcttctcaaaaagtt 18606824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 238
Target Start/End: Complemental strand, 2260611 - 2260519
Alignment:
Q  145 caaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgct-ttttgaccccttatctttacaaaaagtt 238  Q
    |||||||||||||  |||||||| ||||||||||  ||||||| | ||| |||||||||||||| | |||| ||||||||||||  |||||||||    
T  2260611 caaaagtgacccc--atgtttagtgaaatatgcttttttgaccccataatataagggaaatatgatattttaaccccttatcttctcaaaaagtt 2260519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 234
Target Start/End: Original strand, 28750346 - 28750437
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataa-gggaaatatgctttttgaccccttatctttacaaaa 234  Q
    ||||||||||||||  ||||||||  |||||||||| |||||||  ||||||||| |||||| ||| |||||| || |||||||||| ||||    
T  28750346 gcaaaagtgacccctcatgtttagaaaaatatgctcttttgaccctctaacataaggggaaaaatgttttttggcctcttatctttataaaa 28750437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 144 - 227
Target Start/End: Original strand, 9387762 - 9387846
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttga-cctcctaacataagggaaatatgct-ttttgaccccttatctt 227  Q
    |||||||| |||||| ||||||| |||||||||||| ||||| || |||||||||||||||||||  | ||||||||| |||||||    
T  9387762 gcaaaagtaaccccc-atgtttaaggaaatatgctcttttgacccccctaacataagggaaatataatcttttgaccctttatctt 9387846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 238
Target Start/End: Original strand, 10684862 - 10684957
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcc-taacataagggaaatatgct-ttttgaccccttatctttacaaaaagtt 238  Q
    |||||||||||||| | ||||||||||||||| |||  |||||| || |||||||||  ||||||| | |||||||||||||||||  |||||||||    
T  10684862 gcaaaagtgaccccat-tgtttagggaaatatactctattgacccccctaacataagaaaaatatgatcttttgaccccttatcttctcaaaaagtt 10684957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 208
Target Start/End: Original strand, 16971935 - 16971983
Alignment:
Q  160 atgtttagggaaatatgctcatttgacctcctaacataagggaaatatg 208  Q
    ||||||||||| |||||||| || |||| ||||||||||||||||||||    
T  16971935 atgtttagggatatatgctctttagaccccctaacataagggaaatatg 16971983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 160 - 239
Target Start/End: Complemental strand, 26605494 - 26605417
Alignment:
Q  160 atgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagtta 239  Q
    |||||||||||||||||||  ||||||| |||||||||| | ||||||| |||||||   ||||| ||||||||||||||    
T  26605494 atgtttagggaaatatgctattttgacc-cctaacataa-gaaaatatgttttttgatatcttatttttacaaaaagtta 26605417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 96; Significance: 4e-47; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 77 - 260
Target Start/End: Complemental strand, 4597707 - 4597524
Alignment:
Q  77 ctaaccttcatttttcgtcttgtaaatttcaaaatgttgcaattttggccctttattnnnnnnnntcgcaaaagtgaccccctatgtttagggaaatatg 176  Q
    |||| ||||| |||||| | | ||| |||||||||||||||||||||||||  ||||        | |||||| ||||||||||||||||||||||||||    
T  4597707 ctaaacttcacttttcgccctctaagtttcaaaatgttgcaattttggccccctattataaaaaatggcaaaaatgaccccctatgtttagggaaatatg 4597608  T
Q  177 ctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcattatggcccctttcttgg 260  Q
    ||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||   |||||||||||||| ||||    
T  4597607 ctcttttgacctcctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgcaattatggccccttttttgg 4597524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 144 - 255
Target Start/End: Original strand, 24603430 - 24603541
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcat 243  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||    
T  24603430 gcaaaagtgaccccctatgtttagggaaatatgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgat 24603529  T
Q  244 tatggccccttt 255  Q
    ||||||||||||    
T  24603530 tatggccccttt 24603541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 144 - 260
Target Start/End: Original strand, 34833994 - 34834110
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcat 243  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||  ||    
T  34833994 gcaaaagtgaccccctatgtttagggaaatatgctcttttgacctcctaacataagggaaatatgttttttgacccgttatctttacaaaaagttacaat 34834093  T
Q  244 tatggcccctttcttgg 260  Q
    |||||||||||| ||||    
T  34834094 tatggccccttttttgg 34834110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 144 - 255
Target Start/End: Original strand, 18791426 - 18791537
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcat 243  Q
    |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||   ||    
T  18791426 gcaaaagtgaccccctatgtttagggaaatatgctcttttgaccccctaacataagggaaatatgctttttgacccctcatctttacaaaaagttgcgat 18791525  T
Q  244 tatggccccttt 255  Q
    ||||||||||||    
T  18791526 tatggccccttt 18791537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 77 - 260
Target Start/End: Complemental strand, 26710609 - 26710426
Alignment:
Q  77 ctaaccttcatttttcgtcttgtaaatttcaaaatgttgcaattttggccctttattnnnnnnnntcgcaaaagtgaccccctatgtttagggaaatatg 176  Q
    |||| ||||| |||||| | | ||| |||||||||||||| ||||||||||  ||||        | ||||||| |||||||||||||||||||||||||    
T  26710609 ctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttggccccctattaaaaaaaatggcaaaagcgaccccctatgtttagggaaatatg 26710510  T
Q  177 ctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcattatggcccctttcttgg 260  Q
    ||| |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||   |||||||||||||| ||||    
T  26710509 ctcttttgacctcctaacataaggaaaatatgttttttgaccccttatctttacaaaaagttgcgattatggccccttttttgg 26710426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 154 - 260
Target Start/End: Complemental strand, 35102716 - 35102610
Alignment:
Q  154 ccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcattatggcccct 253  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||    
T  35102716 ccccctatgtttagggaaatatgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggcccct 35102617  T
Q  254 ttcttgg 260  Q
    || ||||    
T  35102616 tttttgg 35102610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 145 - 238
Target Start/End: Original strand, 31210864 - 31210957
Alignment:
Q  145 caaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagtt 238  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31210864 caaaagtgaccccctatgtttaggaaaatatgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagtt 31210957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 144 - 255
Target Start/End: Original strand, 32451795 - 32451906
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcat 243  Q
    |||||||||||||||||||||||  ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||    
T  32451795 gcaaaagtgaccccctatgtttatagaaatatgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgat 32451894  T
Q  244 tatggccccttt 255  Q
    |||| |||||||    
T  32451895 tatgaccccttt 32451906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 144 - 238
Target Start/End: Original strand, 15298554 - 15298648
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagtt 238  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||||| |||||||||||||||||||||    
T  15298554 gcaaaagtgaccccctatgtttagggaaatatgctcttttgacctcctaacataaggaaaatatgttttttgatcccttatctttacaaaaagtt 15298648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 144 - 238
Target Start/End: Original strand, 24051077 - 24051171
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagtt 238  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| |||||||||||||||| |||||||||||||    
T  24051077 gcaaaagtgaccccctatgtttagggaaatatgctcttttgacctcctaacataagagaaatatactttttgaccccttatatttacaaaaagtt 24051171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 107 - 260
Target Start/End: Original strand, 25819717 - 25819869
Alignment:
Q  107 aaaatgttgcaattttggccctttattnnnnnnnntcgcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaata 206  Q
    |||||||||||||||||||||  ||||        | |||||||||||||| ||||||||||||||||| ||| | ||||||||||||||||||||||||    
T  25819717 aaaatgttgcaattttggccccctattaaaaaaaatggcaaaagtgacccc-tatgtttagggaaatatactcttctgacctcctaacataagggaaata 25819815  T
Q  207 tgctttttgaccccttatctttacaaaaagttatcattatggcccctttcttgg 260  Q
    ||||||||||||||||||||||||||||||||   |||||| ||||||| ||||    
T  25819816 tgctttttgaccccttatctttacaaaaagttgcgattatgaccccttttttgg 25819869  T

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Target: chr6; HSP #12
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 144 - 260
Target Start/End: Original strand, 8412827 - 8412943
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcat 243  Q
    ||||||| |||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||   ||    
T  8412827 gcaaaagcgaccccctatgtttagagaaatatgctcttttgaccccctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgat 8412926  T
Q  244 tatggcccctttcttgg 260  Q
    |||| ||||||| ||||    
T  8412927 tatgaccccttttttgg 8412943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 144 - 260
Target Start/End: Complemental strand, 14572412 - 14572297
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcat 243  Q
    |||||||||||||| ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||   ||    
T  14572412 gcaaaagtgacccc-tatgtttagggaaatatgctcttttgacatcctaacataagggaaatatgctttttgaccccttatctttataaaaagttgcgat 14572314  T
Q  244 tatggcccctttcttgg 260  Q
    |||||||| ||| ||||    
T  14572313 tatggccctttttttgg 14572297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 144 - 238
Target Start/End: Complemental strand, 22968389 - 22968296
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagtt 238  Q
    |||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  22968389 gcaaaagtgaccccctatgtttagggaaatatgctcttttgaccccctaacataagggaaatatgttttttga-cccttatctttacaaaaagtt 22968296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 144 - 238
Target Start/End: Original strand, 23820004 - 23820097
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagtt 238  Q
    |||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  23820004 gcaaaagtgaccccctatgtttagggaaatatgctcttttgaccccctaacataagggaaatatgttttttga-cccttatctttacaaaaagtt 23820097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 144 - 235
Target Start/End: Original strand, 3118748 - 3118839
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaa 235  Q
    ||||||||||||| |||||||||||||||||||||| ||||||| |||||||||||||||||||| ||||||||| ||||||||||||||||    
T  3118748 gcaaaagtgaccctctatgtttagggaaatatgctcttttgaccccctaacataagggaaatatgttttttgacctcttatctttacaaaaa 3118839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 144 - 239
Target Start/End: Complemental strand, 32682512 - 32682418
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagtta 239  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||| |||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  32682512 gcaaaagtgacccc-tatgtttagggaaatatgctcttttgacctcataacataaaggaaatatgttttttgaccccttatctttacaaaaagtta 32682418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 166 - 260
Target Start/End: Complemental strand, 18749309 - 18749215
Alignment:
Q  166 agggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcattatggcccctttcttgg 260  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | |||||| ||||||| ||||    
T  18749309 agggaaatatgttcatttgacctcataacataagggaaatatgctttttgaccccttatctttacaaaaagttgtgattatgtccccttttttgg 18749215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 144 - 260
Target Start/End: Original strand, 22269477 - 22269591
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcat 243  Q
    |||||||||||||| |||||||||||||||||| || ||||||| | |||||||||||||||||| ||||||||||||||||||||||||||||| |  |    
T  22269477 gcaaaagtgacccc-tatgtttagggaaatatgttcttttgacc-cttaacataagggaaatatgttttttgaccccttatctttacaaaaagttgtgtt 22269574  T
Q  244 tatggcccctttcttgg 260  Q
    |||||||||||| ||||    
T  22269575 tatggccccttttttgg 22269591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 144 - 238
Target Start/End: Original strand, 4370967 - 4371061
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgct-ttttgaccccttatctttacaaaaagtt 238  Q
    ||||||||||||| | |||||||||||||||||||| ||||||| ||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  4370967 gcaaaagtgaccctccatgtttagggaaatatgctcttttgacc-cctaacataagggaaatatgctcctttgaccccttatctttacaaaaagtt 4371061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 145 - 255
Target Start/End: Complemental strand, 19282445 - 19282335
Alignment:
Q  145 caaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcatt 244  Q
    ||||||||||||| |||||||| | |||||||||  ||||| ||||||||||||||||||||||| |||||||||||||||||| |||||||||   |||    
T  19282445 caaaagtgaccccttatgtttaagtaaatatgctattttgaactcctaacataagggaaatatgcattttgaccccttatcttttcaaaaagttgcgatt 19282346  T
Q  245 atggccccttt 255  Q
    ||| |||||||    
T  19282345 atgaccccttt 19282335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 144 - 208
Target Start/End: Complemental strand, 18749363 - 18749299
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatg 208  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  18749363 gcaaaagtgaccccctatgtttagggaaatatgctcttttgacctcttaacataagggaaatatg 18749299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 145 - 254
Target Start/End: Complemental strand, 4013900 - 4013791
Alignment:
Q  145 caaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttatcat 243  Q
    |||||||||||||| |||||||||||||||||||| ||||||| ||||| |||||||||||||| | |||||||||||||||||  ||||| |||   ||    
T  4013900 caaaagtgaccccc-atgtttagggaaatatgctcttttgaccccctaatataagggaaatatgatcttttgaccccttatcttctcaaaatgttgcgat 4013802  T
Q  244 tatggcccctt 254  Q
    |||||||||||    
T  4013801 tatggcccctt 4013791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 145 - 227
Target Start/End: Original strand, 26240025 - 26240109
Alignment:
Q  145 caaaagtgaccccctatgtttagggaaatatgctcatttgacctcc-taacataagggaaatatgct-ttttgaccccttatctt 227  Q
    |||||||||||||  ||||||| |||||||||||| ||||||| || |||||||||||||||||| | |||||||||||||||||    
T  26240025 caaaagtgacccctcatgtttacggaaatatgctcttttgacccccttaacataagggaaatatgatcttttgaccccttatctt 26240109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 145 - 227
Target Start/End: Complemental strand, 16415564 - 16415482
Alignment:
Q  145 caaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgct-ttttgaccccttatctt 227  Q
    ||||||||||||| |||||||||||||||||  || ||||||| |||||||||||||||||||| | |||||||| ||||||||    
T  16415564 caaaagtgacccc-tatgtttagggaaatatattcttttgaccgcctaacataagggaaatatgatattttgaccgcttatctt 16415482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 164 - 238
Target Start/End: Complemental strand, 24615908 - 24615835
Alignment:
Q  164 ttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagtt 238  Q
    |||||||||||||||| ||||||| ||||||||| | ||||||||||||||||||| || ||||||| |||||||    
T  24615908 ttagggaaatatgctcttttgacc-cctaacatatgagaaatatgctttttgacccattctctttactaaaagtt 24615835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 144 - 235
Target Start/End: Original strand, 12427300 - 12427392
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatg-ctttttgaccccttatctttacaaaaa 235  Q
    |||||||||| |||| |||||||||||||||||||| ||||| |   |||||||| |||||||||  ||||| |||| |||||||||||||||    
T  12427300 gcaaaagtgatcccccatgtttagggaaatatgctcttttgaaccattaacataaaggaaatatgttttttttaccctttatctttacaaaaa 12427392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 154 - 238
Target Start/End: Original strand, 9241732 - 9241815
Alignment:
Q  154 ccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgct-ttttgaccccttatctttacaaaaagtt 238  Q
    |||||| || ||||||||||||| || |||||||  ||||||||||||||||||| | |||||||||||||||||  |||||||||    
T  9241732 ccccctttgcttagggaaatatgttcttttgacc--ctaacataagggaaatatgatcttttgaccccttatcttctcaaaaagtt 9241815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 144 - 208
Target Start/End: Complemental strand, 2059057 - 2058993
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatg 208  Q
    |||||||||||||   |||||||||||||||||||  ||||||  ||||||||||||||||||||    
T  2059057 gcaaaagtgacccttcatgtttagggaaatatgctattttgacaccctaacataagggaaatatg 2058993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 103 - 238
Target Start/End: Original strand, 34528180 - 34528311
Alignment:
Q  103 tttcaaaatgttgcaattttggccctttattnnnnnnnntcgcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataaggga 202  Q
    |||||||||||||| ||||| |||| |||||        | ||||||||||||| ||||||||||||||||||     |||| || ||||||||||  ||    
T  34528180 tttcaaaatgttgctattttagccccttattaaaaaaaatggcaaaagtgaccctctatgtttagggaaatat-----tttggccccctaacataaatga 34528274  T
Q  203 aatatgct-ttttgaccccttatctttacaaaaagtt 238  Q
    |||||| | |||||||||||||||||  |||||||||    
T  34528275 aatatgatcttttgaccccttatcttctcaaaaagtt 34528311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 189 - 238
Target Start/End: Original strand, 2636890 - 2636940
Alignment:
Q  189 cctaacataagggaaatatgct-ttttgaccccttatctttacaaaaagtt 238  Q
    |||||||||||| ||||||||| |||||||||||||| |||||||||||||    
T  2636890 cctaacataaggtaaatatgctattttgaccccttatttttacaaaaagtt 2636940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 211 - 260
Target Start/End: Complemental strand, 20863896 - 20863847
Alignment:
Q  211 ttttgaccccttatctttacaaaaagttatcattatggcccctttcttgg 260  Q
    ||||||||||||||||||||||||||||   |||||||||||||| ||||    
T  20863896 ttttgaccccttatctttacaaaaagttgcgattatggccccttttttgg 20863847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 238
Target Start/End: Complemental strand, 12291616 - 12291558
Alignment:
Q  181 tttgacctcctaacataagggaaatatgct-ttttgaccccttatctttacaaaaagtt 238  Q
    ||||||| |||||||||||||||||||| | ||||||||| |||||||  |||||||||    
T  12291616 tttgaccccctaacataagggaaatatgatcttttgaccctttatcttctcaaaaagtt 12291558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 255
Target Start/End: Complemental strand, 23124898 - 23124844
Alignment:
Q  202 aaatatgct-ttttgaccccttatctttacaaaaagttatcattatggccccttt 255  Q
    ||||||||| ||||||||||||||||||||||||||||   |||||| |||||||    
T  23124898 aaatatgctcttttgaccccttatctttacaaaaagttgcgattatgaccccttt 23124844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 93; Significance: 2e-45; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 144 - 252
Target Start/End: Original strand, 17648312 - 17648420
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcat 243  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||    
T  17648312 gcaaaagtgaccccctatgtttagggaaatatgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgat 17648411  T
Q  244 tatggcccc 252  Q
    |||||||||    
T  17648412 tatggcccc 17648420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 144 - 260
Target Start/End: Complemental strand, 19391622 - 19391506
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcat 243  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||   ||    
T  19391622 gcaaaagtgaccccctatgtttagggaaatatgctcttttgacctcctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgat 19391523  T
Q  244 tatggcccctttcttgg 260  Q
    |||||||||||| ||||    
T  19391522 tatggccccttttttgg 19391506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 77 - 260
Target Start/End: Complemental strand, 4519169 - 4518986
Alignment:
Q  77 ctaaccttcatttttcgtcttgtaaatttcaaaatgttgcaattttggccctttattnnnnnnnntcgcaaaagtgaccccctatgtttagggaaatatg 176  Q
    |||| ||||| |||||||| | ||| |||||||||||||| |||||||| |  ||||        | |||||||||||||||||||||||||||||||||    
T  4519169 ctaaacttcacttttcgtcctctaagtttcaaaatgttgcgattttggctccctattaaaaaaaatggcaaaagtgaccccctatgtttagggaaatatg 4519070  T
Q  177 ctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcattatggcccctttcttgg 260  Q
    ||| ||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||   |||||||||||||| ||||    
T  4519069 ctcttttgatctcctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgattatggccccttttttgg 4518986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 77 - 264
Target Start/End: Complemental strand, 30784566 - 30784379
Alignment:
Q  77 ctaaccttcatttttcgtcttgtaaatttcaaaatgttgcaattttggccctttattnnnnnnnntcgcaaaagtgaccccctatgtttagggaaatatg 176  Q
    |||| ||||| |||||| | | ||| |||||||||||||| |||||||||| |||||        | |||||||||||||| ||||||||||||||||||    
T  30784566 ctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttggccccttattaaaaaaaatggcaaaagtgaccccgtatgtttagggaaatatg 30784467  T
Q  177 ctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcattatggcccctttcttggacac 264  Q
    ||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||   |||||||||| ||| | ||||||    
T  30784466 ctcttttgacctcctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgattatggcccttttttgggacac 30784379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 107 - 260
Target Start/End: Original strand, 19924297 - 19924450
Alignment:
Q  107 aaaatgttgcaattttggccctttattnnnnnnnntcgcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaata 206  Q
    ||||||||||||||||||||| |||||        | |||||||||||||||||||||||||||||||| ||| | ||||||||||||||||||||||||    
T  19924297 aaaatgttgcaattttggccccttattaaaaaaaatggcaaaagtgaccccctatgtttagggaaatatactcttctgacctcctaacataagggaaata 19924396  T
Q  207 tgctttttgaccccttatctttacaaaaagttatcattatggcccctttcttgg 260  Q
    ||||||||||||||||||||||||||||||||   |||||| ||||||| ||||    
T  19924397 tgctttttgaccccttatctttacaaaaagttgcgattatgaccccttttttgg 19924450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 103 - 261
Target Start/End: Complemental strand, 8802675 - 8802518
Alignment:
Q  103 tttcaaaatgttgcaattttggccctttattnnnnnnnntcgcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataaggga 202  Q
    |||||||||||||| ||||||||||  ||||        | ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||    
T  8802675 tttcaaaatgttgcgattttggccccctattaaaaaaaatggcaaaagtgaccctctatgtttagggaaatatgctcttttgacctcctaacataaggga 8802576  T
Q  203 aatatgctttttgaccccttatctttacaaaaagttatcattatggcccctttcttgga 261  Q
    |||| |||||||||||||||||||||||||||||||   |||||||||||||| |||||    
T  8802575 aata-gctttttgaccccttatctttacaaaaagttgcgattatggccccttttttgga 8802518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 146 - 260
Target Start/End: Original strand, 38630126 - 38630240
Alignment:
Q  146 aaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcatta 245  Q
    ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||    
T  38630126 aaaagtgactccctatgtttagggaaatatgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgatta 38630225  T
Q  246 tggcccctttcttgg 260  Q
    || ||||||| ||||    
T  38630226 tgaccccttttttgg 38630240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 144 - 264
Target Start/End: Original strand, 33895443 - 33895563
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcat 243  Q
    |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||   ||    
T  33895443 gcaaaagtgatcccctatgtttagggaaatatgctcttttgacctcctaacataagggaaatatgttttttaaccccttatctttacaaaaagttgcaat 33895542  T
Q  244 tatggcccctttcttggacac 264  Q
    |||||||| ||| ||||||||    
T  33895543 tatggccctttttttggacac 33895563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 144 - 261
Target Start/End: Complemental strand, 4807836 - 4807718
Alignment:
Q  144 gcaaaagtgacccc-ctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatca 242  Q
    |||||||||||||| ||||||||| ||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   |    
T  4807836 gcaaaagtgacccctctatgtttaaggaaatatgttcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcga 4807737  T
Q  243 ttatggcccctttcttgga 261  Q
    ||||||||||||| |||||    
T  4807736 ttatggccccttttttgga 4807718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 144 - 260
Target Start/End: Complemental strand, 5192506 - 5192390
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcat 243  Q
    |||||||||||| ||||||||||||||||||||||| ||||||||| |||||||||||||||||| ||||||||| |||||||||||||||||||   ||    
T  5192506 gcaaaagtgacctcctatgtttagggaaatatgctcttttgacctcttaacataagggaaatatgttttttgacctcttatctttacaaaaagttgcgat 5192407  T
Q  244 tatggcccctttcttgg 260  Q
    |||||||||||| ||||    
T  5192406 tatggccccttttttgg 5192390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 82 - 260
Target Start/End: Complemental strand, 12723558 - 12723380
Alignment:
Q  82 cttcatttttcgtcttgtaaatttcaaaatgttgcaattttggccctttattnnnnnnnntcgcaaaagtgaccccctatgtttagggaaatatgctcat 181  Q
    ||||| |||||| | | ||| |||||||||||||| ||||||||||  ||||        | |||||| ||||||||||||||||| ||||||||||| |    
T  12723558 cttcacttttcgccctctaagtttcaaaatgttgcgattttggccccctattaaaaaaaatggcaaaaatgaccccctatgtttagagaaatatgctctt 12723459  T
Q  182 ttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcattatggcccctttcttgg 260  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||   ||||||| |||||| ||||    
T  12723458 ttgacctcctaacataagggaaatatgttttttgacccgttatctttacaaaaagttgcgattatggtcccttttttgg 12723380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 103 - 234
Target Start/End: Original strand, 44147000 - 44147130
Alignment:
Q  103 tttcaaaatgttgcaattttggccctttattnnnnnnnntcgcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataaggga 202  Q
    |||||||||||||| ||||||||||  ||||        | |||||||||||||| ||||||||||||||||||||  ||||||||||||||||||||||    
T  44147000 tttcaaaatgttgcgattttggccccctattaaaaaaaatggcaaaagtgacccc-tatgtttagggaaatatgctattttgacctcctaacataaggga 44147098  T
Q  203 aatatgctttttgaccccttatctttacaaaa 234  Q
    ||||||||||||||||||||||||||||||||    
T  44147099 aatatgctttttgaccccttatctttacaaaa 44147130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 144 - 238
Target Start/End: Complemental strand, 22452408 - 22452314
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagtt 238  Q
    |||||||||||| | ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  22452408 gcaaaagtgacctcatatatttagggaaatatgctcttttgacctcctaacataagggaaatatgctttttgacctcttatctttacaaaaagtt 22452314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 144 - 260
Target Start/End: Complemental strand, 21666509 - 21666393
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcat 243  Q
    ||||||||||||||| ||||||||||||||||||||  |||||| |||||||||||||||||||| |||||||||||||||||||| | ||||||   ||    
T  21666509 gcaaaagtgaccccccatgtttagggaaatatgctctcttgaccccctaacataagggaaatatgttttttgaccccttatctttagataaagttgcaat 21666410  T
Q  244 tatggcccctttcttgg 260  Q
    |||||||||||| ||||    
T  21666409 tatggccccttttttgg 21666393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 144 - 261
Target Start/End: Complemental strand, 32400557 - 32400440
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcat 243  Q
    |||||||||||||||||||||||| ||||||||| | ||||||| ||||||||||||||||||||| ||||||||  ||||||||||||||||||   ||    
T  32400557 gcaaaagtgaccccctatgtttagtgaaatatgcgcttttgaccccctaacataagggaaatatgccttttgaccatttatctttacaaaaagttgcaat 32400458  T
Q  244 tatggcccctttcttgga 261  Q
    |||| ||||||| |||||    
T  32400457 tatgaccccttttttgga 32400440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 144 - 215
Target Start/End: Complemental strand, 21930037 - 21929967
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttg 215  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  21930037 gcaaaagtgacccc-tatgtttagggaaatatgctcttttgacctcctaacataagggaaatatgctttttg 21929967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 144 - 238
Target Start/End: Complemental strand, 18881736 - 18881644
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgct-ttttgaccccttatctttacaaaaagtt 238  Q
    |||||||||||||   |||||||||||||||||||  ||||| || ||||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  18881736 gcaaaagtgaccc---atgtttagggaaatatgctattttgagcttctaacataagggaaatacgctcttttgaccccttatctttacaaaaagtt 18881644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 149 - 238
Target Start/End: Original strand, 3380272 - 3380361
Alignment:
Q  149 agtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagtt 238  Q
    |||||||||| ||||||||| |||||||||| |||| ||  ||| ||||||||||||||| ||||||||| ||||||| |||||||||||    
T  3380272 agtgaccccccatgtttaggtaaatatgctcttttgtccctctagcataagggaaatatgttttttgacctcttatctctacaaaaagtt 3380361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 145 - 227
Target Start/End: Original strand, 3208050 - 3208132
Alignment:
Q  145 caaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgct-ttttgaccccttatctt 227  Q
    ||||||||| || ||||||||||||||||||| || ||||||| |||||||||||||||||||| | |||||||||||||||||    
T  3208050 caaaagtgaacctctatgtttagggaaatatgttcttttgacc-cctaacataagggaaatatgatattttgaccccttatctt 3208132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 148 - 235
Target Start/End: Complemental strand, 4423262 - 4423173
Alignment:
Q  148 aagtgaccccctatgtttagggaaatatgctcatttgacctcc-taacataagggaaatatgct-ttttgaccccttatctttacaaaaa 235  Q
    ||||||||||| ||||||| ||||||||| || ||| |||||| |||||||||||||||||| | |||||||||||||||||| ||||||    
T  4423262 aagtgaccccccatgtttatggaaatatgttcttttaacctccataacataagggaaatatgatcttttgaccccttatcttttcaaaaa 4423173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 144 - 260
Target Start/End: Complemental strand, 7117348 - 7117233
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttatca 242  Q
    ||||||||||||||  |||||||| ||||||||||| |||||||  |||||| ||||| ||| || | |||| |||||||||||||||||||||||   |    
T  7117348 gcaaaagtgacccc--atgtttagagaaatatgctcttttgacccactaacagaaggggaatgtgttcttttaaccccttatctttacaaaaagttgcaa 7117251  T
Q  243 ttatggcccctttcttgg 260  Q
    ||||||||| ||| ||||    
T  7117250 ttatggccctttttttgg 7117233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 146 - 250
Target Start/End: Complemental strand, 18253117 - 18253015
Alignment:
Q  146 aaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgcttttt-gaccccttatctttacaaaaagttatcatt 244  Q
    ||||||||||||  ||||||||||||||||| |  ||||||| | |||||||||||||||||| ||||| |||||||||||||  ||||||||| | |||    
T  18253117 aaaagtgacccc--atgtttagggaaatatgtttttttgacc-cataacataagggaaatatgattttttgaccccttatcttctcaaaaagttgtgatt 18253021  T
Q  245 atggcc 250  Q
    ||||||    
T  18253020 atggcc 18253015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 200 - 251
Target Start/End: Original strand, 23565214 - 23565265
Alignment:
Q  200 ggaaatatgctttttgaccccttatctttacaaaaagttatcattatggccc 251  Q
    |||||||||||||||||||||||||||||||||||||||   ||||||||||    
T  23565214 ggaaatatgctttttgaccccttatctttacaaaaagttgcgattatggccc 23565265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 144 - 208
Target Start/End: Original strand, 1824676 - 1824737
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatg 208  Q
    ||||||||||||||  |||||||||||||||||||| ||||||| |||||||||||| |||||||    
T  1824676 gcaaaagtgacccc--atgtttagggaaatatgctcttttgacc-cctaacataaggaaaatatg 1824737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 144 - 208
Target Start/End: Original strand, 1859121 - 1859182
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatg 208  Q
    ||||||||||||||  |||||||||||||||||||| ||||||| |||||||||||| |||||||    
T  1859121 gcaaaagtgacccc--atgtttagggaaatatgctcttttgacc-cctaacataaggaaaatatg 1859182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 144 - 247
Target Start/End: Original strand, 31268348 - 31268450
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttatca 242  Q
    ||||||||||| |||  ||||||||||||||||||| |||| || | ||||||||||| |||||||| ||| ||||| ||||||||| |||||||| | |    
T  31268348 gcaaaagtgactccccgtgtttagggaaatatgctcttttg-ccccataacataaggg-aatatgctctttagaccctttatctttataaaaagttgtga 31268445  T
Q  243 ttatg 247  Q
    |||||    
T  31268446 ttatg 31268450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 190 - 260
Target Start/End: Complemental strand, 41385680 - 41385609
Alignment:
Q  190 ctaacataagggaaatatgcttttt-gaccccttatctttacaaaaagttatcattatggcccctttcttgg 260  Q
    ||||||||||||||||||| ||||| ||||||||||| |  ||||||||| | |||||||| ||| ||||||    
T  41385680 ctaacataagggaaatatgattttttgaccccttatcatctcaaaaagttgtgattatggcacctgtcttgg 41385609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 92; Significance: 9e-45; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 77 - 260
Target Start/End: Complemental strand, 25266 - 25083
Alignment:
Q  77 ctaaccttcatttttcgtcttgtaaatttcaaaatgttgcaattttggccctttattnnnnnnnntcgcaaaagtgaccccctatgtttagggaaatatg 176  Q
    |||| |||||||||||||| | ||| ||  |||||||||| |||||||||| |||||        | | |||||||||||||||||||||||||||||||    
T  25266 ctaaacttcatttttcgtcctctaagttctaaaatgttgcgattttggccccttattaaaaaaaatggtaaaagtgaccccctatgtttagggaaatatg 25167  T
Q  177 ctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcattatggcccctttcttgg 260  Q
    ||| ||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||| | |||||||||||||| ||||    
T  25166 ctcttttgaccccctaacataagggaaatatgctttttgaccccttatctttaacaaaagttgtgattatggccccttttttgg 25083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0607 (Bit Score: 89; Significance: 6e-43; HSPs: 1)
Name: scaffold0607
Description:

Target: scaffold0607; HSP #1
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 144 - 260
Target Start/End: Complemental strand, 2284 - 2168
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcat 243  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||   ||    
T  2284 gcaaaagtgaccccctatgtttagggaaatatgctcttttgacctcctaacataagggcaatatgctttttgaccccttatctttacaaaaagttgcgat 2185  T
Q  244 tatggcccctttcttgg 260  Q
    |||| ||||||| ||||    
T  2184 tatgaccccttttttgg 2168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179 (Bit Score: 89; Significance: 6e-43; HSPs: 1)
Name: scaffold0179
Description:

Target: scaffold0179; HSP #1
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 144 - 264
Target Start/End: Complemental strand, 5884 - 5764
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcat 243  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||   ||    
T  5884 gcaaaagtgaccccctatgtttagggaaatatgctcttttgacctcctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgat 5785  T
Q  244 tatggcccctttcttggacac 264  Q
    |||||||| ||| | ||||||    
T  5784 tatggcccttttttgggacac 5764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1202 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold1202
Description:

Target: scaffold1202; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 144 - 238
Target Start/End: Complemental strand, 2009 - 1915
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagtt 238  Q
    |||||||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2009 gcaaaagtgaccccctatgtttagggaaatatgctattttgaccccctaacataagggaaatatgctttttgaccccttatctttacaaaaagtt 1915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419 (Bit Score: 82; Significance: 8e-39; HSPs: 1)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 103 - 260
Target Start/End: Complemental strand, 3236 - 3079
Alignment:
Q  103 tttcaaaatgttgcaattttggccctttattnnnnnnnntcgcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataaggga 202  Q
    ||||||||||||||||||||| |||  ||||        | |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||    
T  3236 tttcaaaatgttgcaattttgaccccctattaaaaaaaatggcaaaagtgacctcctatgtttagggaaatatgctcttttgacctcctaacataaggga 3137  T
Q  203 aatatgctttttgaccccttatctttacaaaaagttatcattatggcccctttcttgg 260  Q
    |||||| ||||||||| |||||||||||||||||||   ||||||||| |||| ||||    
T  3136 aatatgttttttgacctcttatctttacaaaaagttgcaattatggcctcttttttgg 3079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 144 - 260
Target Start/End: Complemental strand, 142181 - 142066
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcat 243  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||   ||    
T  142181 gcaaaagtgacccc-tatgtttagggaaatatgctcttttgacctcctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgat 142083  T
Q  244 tatggcccctttcttgg 260  Q
    |||||||| ||| ||||    
T  142082 tatggcccattttttgg 142066  T

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Target: scaffold0267 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0267
Description:

Target: scaffold0267; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 144 - 260
Target Start/End: Complemental strand, 3801 - 3687
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcat 243  Q
    ||||||||||||||  |||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||   ||    
T  3801 gcaaaagtgacccc--atgtttagggaaatatgctcttttgaccccctaacataagggaaatatgctttttgaccccttatctttacaaaaagtttcgat 3704  T
Q  244 tatggcccctttcttgg 260  Q
    ||| |||||||| ||||    
T  3703 tatagccccttttttgg 3687  T

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Target: scaffold0062 (Bit Score: 76; Significance: 3e-35; HSPs: 2)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 148 - 255
Target Start/End: Original strand, 49732 - 49839
Alignment:
Q  148 aagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcattatg 247  Q
    |||||||||||||||||| ||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||   ||||||    
T  49732 aagtgaccccctatgtttcgggaaatatgctcttttgaccccctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgattatg 49831  T
Q  248 gccccttt 255  Q
     |||||||    
T  49832 accccttt 49839  T

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Target: scaffold0062; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 148 - 255
Target Start/End: Original strand, 62271 - 62378
Alignment:
Q  148 aagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcattatg 247  Q
    |||||||||||||||||| ||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||   ||||||    
T  62271 aagtgaccccctatgtttcgggaaatatgctcttttgaccccctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgattatg 62370  T
Q  248 gccccttt 255  Q
     |||||||    
T  62371 accccttt 62378  T

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Target: scaffold0060 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 155 - 255
Target Start/End: Original strand, 66254 - 66354
Alignment:
Q  155 cccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcattatggcccctt 254  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||   |||||| ||||||    
T  66254 cccctatgtttagggaaatatgctattttgacctcctaacataagggaactatgctttttgaccccttatctttacaaaaagttgcgattatgacccctt 66353  T
Q  255 t 255  Q
    |    
T  66354 t 66354  T

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Target: scaffold0406 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0406
Description:

Target: scaffold0406; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 164 - 260
Target Start/End: Original strand, 2080 - 2176
Alignment:
Q  164 ttagggaaatatgctcatttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttatcattatggcccctttcttgg 260  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||   ||||| |||||||| ||||    
T  2080 ttagggaaatatgctcttttgacctcctaacataagggaaacatgctttttgaccccatatctttacaaaaagttgcgattatagccccttttttgg 2176  T

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Target: scaffold0150 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 155 - 238
Target Start/End: Original strand, 5911 - 5995
Alignment:
Q  155 cccctatgtttagggaaatatgctcatttgacctcc-taacataagggaaatatgctttttgaccccttatctttacaaaaagtt 238  Q
    ||||||||||||||||||||||||  ||||||| || ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  5911 cccctatgtttagggaaatatgctattttgacccccctaacataagggaaatatgctttttgaccccttatctttataaaaagtt 5995  T

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Target: scaffold1875 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold1875
Description:

Target: scaffold1875; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 144 - 238
Target Start/End: Complemental strand, 991 - 897
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgct-ttttgaccccttatctttacaaaaagtt 238  Q
    ||||||||||||||  ||||||||||| |||||||  |||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  991 gcaaaagtgacccca-atgtttagggatatatgctattttgaccttctaacataaggtaaatatgctcttttgaccccttatctttacaaaaagtt 897  T

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Target: scaffold0007 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 194 - 260
Target Start/End: Complemental strand, 250703 - 250637
Alignment:
Q  194 cataagggaaatatgctttttgaccccttatctttacaaaaagttatcattatggcccctttcttgg 260  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| | |||||||||||||| ||||    
T  250703 cataagggaaatatgttttttgaccccttatctttacaaaaagttgtgattatggccccttttttgg 250637  T

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Target: scaffold0002 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 145 - 252
Target Start/End: Original strand, 455000 - 455108
Alignment:
Q  145 caaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttatcat 243  Q
    |||||||||||||| |||||||||||||||||||| ||| ||| |||||||||| ||||||| | | |||||||||||||||||  | ||||||| | ||    
T  455000 caaaagtgaccccccatgtttagggaaatatgctcttttaaccccctaacataaaggaaatacgatcttttgaccccttatcttctctaaaagttttgat 455099  T
Q  244 tatggcccc 252  Q
    |||| ||||    
T  455100 tatgacccc 455108  T

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Target: scaffold0002; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 151 - 227
Target Start/End: Original strand, 455102 - 455179
Alignment:
Q  151 tgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgct-ttttgaccccttatctt 227  Q
    |||||||| ||||||||| ||||||| || ||| ||| |||||||||||||||||||| | |||||||||||||||||    
T  455102 tgaccccccatgtttaggaaaatatgttcttttaaccccctaacataagggaaatatgatcttttgaccccttatctt 455179  T

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Target: scaffold0174 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 146 - 238
Target Start/End: Original strand, 29789 - 29879
Alignment:
Q  146 aaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgct-ttttgaccccttatctttacaaaaagtt 238  Q
    ||||||||||||  |||||| ||||||||||||| || |||| |||||||||||||||||||| | |||||||||||||||||  |||||||||    
T  29789 aaaagtgacccc--atgtttggggaaatatgctctttggacc-cctaacataagggaaatatgatcttttgaccccttatcttctcaaaaagtt 29879  T

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Target: scaffold0014 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 163 - 238
Target Start/End: Original strand, 112214 - 112290
Alignment:
Q  163 tttagggaaatatgctcatttgacctcctaacataagggaaatatgct-ttttgaccccttatctttacaaaaagtt 238  Q
    |||||||||||||||   |||||||||||||||||||||||||||| | ||||||| |||||||||  |||||||||    
T  112214 tttagggaaatatgcctttttgacctcctaacataagggaaatatgatcttttgactccttatcttctcaaaaagtt 112290  T

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Target: scaffold0291 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 145 - 238
Target Start/End: Original strand, 9992 - 10084
Alignment:
Q  145 caaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataagggaaatatgct-ttttgaccccttatctttacaaaaagtt 238  Q
    |||||||||||| | |||||||||||||||||||| ||||||| | |||||||||| ||||||| | ||| |||||||||||||  |||||||||    
T  9992 caaaagtgaccctc-atgtttagggaaatatgctcttttgacc-cataacataaggaaaatatgatctttagaccccttatcttctcaaaaagtt 10084  T

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Target: scaffold0683 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0683
Description:

Target: scaffold0683; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 199
Target Start/End: Original strand, 5358 - 5413
Alignment:
Q  144 gcaaaagtgaccccctatgtttagggaaatatgctcatttgacctcctaacataag 199  Q
    |||||||||||||| |||||||||  |||||||||| |||||||||||||| ||||    
T  5358 gcaaaagtgaccccttatgtttagaaaaatatgctcttttgacctcctaacgtaag 5413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 189 - 238
Target Start/End: Complemental strand, 3119 - 3069
Alignment:
Q  189 cctaacataagggaaatatgct-ttttgaccccttatctttacaaaaagtt 238  Q
    |||||||||||| ||||||||| |||||||||||||| |||||||||||||    
T  3119 cctaacataaggtaaatatgctattttgaccccttatttttacaaaaagtt 3069  T

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Target: scaffold0064 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 198 - 255
Target Start/End: Original strand, 54492 - 54550
Alignment:
Q  198 agggaaatatgct-ttttgaccccttatctttacaaaaagttatcattatggccccttt 255  Q
    ||||||||||||| ||||| ||||||||||||||||||||||   ||||||||||||||    
T  54492 agggaaatatgctcttttggccccttatctttacaaaaagttgcgattatggccccttt 54550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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