View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11734_low_23 (Length: 255)

Name: NF11734_low_23
Description: NF11734
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11734_low_23
NF11734_low_23
[»] chr7 (36 HSPs)
chr7 (159-255)||(28317733-28317829)
chr7 (159-251)||(40300585-40300677)
chr7 (159-255)||(42881928-42882024)
chr7 (166-251)||(22660211-22660296)
chr7 (159-255)||(30720444-30720539)
chr7 (159-255)||(47159061-47159158)
chr7 (159-243)||(115010-115094)
chr7 (14-66)||(42882104-42882156)
chr7 (159-243)||(38970384-38970470)
chr7 (159-251)||(30630287-30630380)
chr7 (159-250)||(33078456-33078548)
chr7 (159-196)||(26815507-26815544)
chr7 (159-196)||(33508254-33508291)
chr7 (159-196)||(48985266-48985303)
chr7 (14-66)||(47158919-47158971)
chr7 (159-240)||(37952115-37952196)
chr7 (159-243)||(33379621-33379705)
chr7 (162-196)||(36521880-36521914)
chr7 (159-251)||(37888708-37888800)
chr7 (159-196)||(5813661-5813698)
chr7 (208-249)||(30566952-30566993)
chr7 (159-196)||(32126903-32126940)
chr7 (159-196)||(32749335-32749372)
chr7 (159-196)||(35028472-35028509)
chr7 (159-196)||(39770112-39770149)
chr7 (163-196)||(40690709-40690742)
chr7 (160-196)||(22194615-22194651)
chr7 (160-196)||(43570795-43570831)
chr7 (208-243)||(43201639-43201674)
chr7 (159-196)||(24793819-24793856)
chr7 (160-193)||(25038245-25038278)
chr7 (159-196)||(25217942-25217979)
chr7 (159-196)||(37888222-37888259)
chr7 (212-240)||(20354596-20354624)
chr7 (208-240)||(37888176-37888208)
chr7 (212-240)||(38351952-38351980)
[»] chr3 (75 HSPs)
chr3 (159-255)||(51998890-51998986)
chr3 (159-255)||(6044982-6045078)
chr3 (159-255)||(42564270-42564366)
chr3 (159-255)||(50734340-50734436)
chr3 (159-255)||(50778419-50778515)
chr3 (159-255)||(37182718-37182815)
chr3 (159-255)||(32120088-32120185)
chr3 (159-255)||(44084632-44084729)
chr3 (159-251)||(4046448-4046541)
chr3 (159-251)||(41183598-41183691)
chr3 (159-255)||(10424304-10424402)
chr3 (14-66)||(6044836-6044888)
chr3 (14-66)||(32119941-32119993)
chr3 (14-66)||(44084822-44084874)
chr3 (159-243)||(20139893-20139977)
chr3 (159-243)||(29701991-29702075)
chr3 (159-251)||(55027091-55027183)
chr3 (159-235)||(12975173-12975249)
chr3 (159-240)||(31169915-31169997)
chr3 (159-240)||(46136922-46137003)
chr3 (159-251)||(49086464-49086556)
chr3 (159-196)||(4873807-4873844)
chr3 (208-249)||(7008440-7008481)
chr3 (159-196)||(25787409-25787446)
chr3 (159-196)||(25829366-25829403)
chr3 (159-196)||(26162189-26162226)
chr3 (159-196)||(30415111-30415148)
chr3 (159-196)||(33934896-33934933)
chr3 (159-196)||(38571797-38571834)
chr3 (159-196)||(42598064-42598101)
chr3 (208-243)||(6832948-6832983)
chr3 (159-240)||(35471967-35472048)
chr3 (208-243)||(35540268-35540303)
chr3 (159-243)||(43475751-43475838)
chr3 (159-193)||(7008504-7008538)
chr3 (159-235)||(48886482-48886558)
chr3 (159-196)||(5844672-5844709)
chr3 (33-66)||(10424185-10424218)
chr3 (159-196)||(11908421-11908458)
chr3 (159-196)||(17469799-17469836)
chr3 (159-196)||(25450134-25450171)
chr3 (159-196)||(27847968-27848005)
chr3 (159-196)||(42602253-42602290)
chr3 (159-196)||(47147656-47147693)
chr3 (159-196)||(50034675-50034712)
chr3 (159-196)||(51436010-51436047)
chr3 (160-196)||(28410777-28410813)
chr3 (162-243)||(33187764-33187846)
chr3 (160-196)||(35852893-35852929)
chr3 (160-196)||(43022986-43023022)
chr3 (160-196)||(46572610-46572646)
chr3 (207-243)||(49407022-49407058)
chr3 (160-195)||(15493431-15493466)
chr3 (208-250)||(15007524-15007566)
chr3 (159-251)||(50020325-50020415)
chr3 (159-240)||(51304897-51304980)
chr3 (207-244)||(4046359-4046396)
chr3 (159-196)||(6832997-6833034)
chr3 (159-196)||(7520781-7520818)
chr3 (159-192)||(33751700-33751733)
chr3 (159-196)||(35540217-35540254)
chr3 (159-196)||(36178134-36178171)
chr3 (159-196)||(37410138-37410175)
chr3 (208-249)||(38571850-38571891)
chr3 (167-196)||(49027075-49027104)
chr3 (159-196)||(49356939-49356976)
chr3 (159-196)||(49822598-49822635)
chr3 (212-240)||(11908375-11908403)
chr3 (159-195)||(15007581-15007617)
chr3 (160-196)||(26549895-26549931)
chr3 (207-251)||(33751639-33751683)
chr3 (212-240)||(49027122-49027150)
chr3 (160-196)||(49146972-49147008)
chr3 (160-196)||(49710155-49710191)
chr3 (160-196)||(53722875-53722911)
[»] chr2 (38 HSPs)
chr2 (159-255)||(14383295-14383391)
chr2 (159-255)||(22349552-22349648)
chr2 (159-255)||(44280442-44280538)
chr2 (159-255)||(36527144-36527242)
chr2 (14-66)||(22349406-22349458)
chr2 (159-251)||(1072712-1072805)
chr2 (159-255)||(43022015-43022114)
chr2 (14-66)||(43022197-43022249)
chr2 (159-240)||(7762833-7762914)
chr2 (159-251)||(926502-926594)
chr2 (159-243)||(4279428-4279513)
chr2 (159-251)||(9118153-9118246)
chr2 (159-251)||(12858218-12858311)
chr2 (159-251)||(30819318-30819411)
chr2 (159-196)||(7585184-7585221)
chr2 (159-196)||(9072621-9072658)
chr2 (159-196)||(39432412-39432449)
chr2 (207-243)||(14151938-14151974)
chr2 (159-196)||(1308331-1308368)
chr2 (159-196)||(1987527-1987564)
chr2 (159-196)||(4296303-4296340)
chr2 (159-196)||(8855382-8855419)
chr2 (159-196)||(13151232-13151269)
chr2 (159-196)||(17928855-17928892)
chr2 (159-196)||(36855056-36855093)
chr2 (207-244)||(44280357-44280394)
chr2 (208-240)||(5145077-5145109)
chr2 (159-195)||(31184938-31184974)
chr2 (160-196)||(43494918-43494954)
chr2 (212-243)||(13151287-13151318)
chr2 (166-196)||(5145027-5145057)
chr2 (208-250)||(31184988-31185030)
chr2 (208-250)||(31204714-31204756)
chr2 (159-196)||(2778797-2778834)
chr2 (159-196)||(36209112-36209149)
chr2 (159-196)||(37246037-37246074)
chr2 (207-251)||(1987469-1987513)
chr2 (159-195)||(31204664-31204700)
[»] chr1 (45 HSPs)
chr1 (159-255)||(45623181-45623277)
chr1 (159-255)||(51494124-51494220)
chr1 (159-255)||(37690946-37691041)
chr1 (159-255)||(29919693-29919789)
chr1 (159-255)||(48384829-48384925)
chr1 (159-251)||(10265684-10265776)
chr1 (159-243)||(43739367-43739451)
chr1 (159-255)||(14097011-14097109)
chr1 (159-255)||(19578562-19578660)
chr1 (167-251)||(31159761-31159844)
chr1 (14-66)||(48384682-48384734)
chr1 (14-66)||(31159937-31159990)
chr1 (159-243)||(17675995-17676078)
chr1 (159-238)||(33167556-33167635)
chr1 (159-251)||(48407698-48407792)
chr1 (159-251)||(45242379-45242472)
chr1 (159-240)||(51156335-51156416)
chr1 (159-196)||(643502-643539)
chr1 (159-196)||(2474774-2474811)
chr1 (159-196)||(8471596-8471633)
chr1 (165-239)||(30878290-30878363)
chr1 (159-240)||(37822942-37823022)
chr1 (159-243)||(51523602-51523687)
chr1 (162-196)||(36231307-36231341)
chr1 (159-196)||(8464950-8464987)
chr1 (159-196)||(27629992-27630029)
chr1 (159-196)||(29524287-29524324)
chr1 (159-196)||(31471571-31471608)
chr1 (159-196)||(37419876-37419913)
chr1 (159-196)||(45363864-45363901)
chr1 (159-195)||(37646089-37646125)
chr1 (159-195)||(44450917-44450953)
chr1 (159-195)||(44651459-44651495)
chr1 (208-251)||(8464893-8464936)
chr1 (208-239)||(36231254-36231285)
chr1 (212-243)||(47297295-47297326)
chr1 (159-196)||(17786629-17786666)
chr1 (159-196)||(52930344-52930381)
chr1 (160-196)||(3754708-3754744)
chr1 (212-240)||(8471551-8471579)
chr1 (207-251)||(17786572-17786616)
chr1 (160-196)||(20584473-20584509)
chr1 (212-240)||(29524239-29524267)
chr1 (160-196)||(47297242-47297278)
chr1 (160-196)||(48927259-48927295)
[»] chr4 (59 HSPs)
chr4 (159-255)||(8995079-8995175)
chr4 (159-255)||(16021165-16021261)
chr4 (159-255)||(34463189-34463285)
chr4 (159-255)||(55549703-55549799)
chr4 (159-255)||(3529908-3530005)
chr4 (159-250)||(33077508-33077599)
chr4 (160-243)||(38173877-38173960)
chr4 (14-66)||(40721520-40721572)
chr4 (159-255)||(34198908-34199005)
chr4 (159-255)||(13113857-13113952)
chr4 (159-255)||(40721336-40721431)
chr4 (14-66)||(3529764-3529816)
chr4 (14-66)||(8995269-8995321)
chr4 (162-251)||(52773219-52773309)
chr4 (159-248)||(56054581-56054669)
chr4 (159-250)||(28901445-28901538)
chr4 (14-66)||(34198762-34198814)
chr4 (14-61)||(34463046-34463094)
chr4 (208-251)||(23539371-23539414)
chr4 (159-240)||(27864243-27864324)
chr4 (159-240)||(35809729-35809810)
chr4 (159-251)||(48506245-48506338)
chr4 (159-250)||(31336182-31336276)
chr4 (159-251)||(40596414-40596506)
chr4 (159-196)||(3614899-3614936)
chr4 (159-196)||(16171542-16171579)
chr4 (159-196)||(21654502-21654539)
chr4 (159-196)||(31848453-31848490)
chr4 (159-237)||(19273256-19273334)
chr4 (159-251)||(19409809-19409902)
chr4 (159-243)||(28447561-28447646)
chr4 (159-235)||(33607351-33607427)
chr4 (159-196)||(2211996-2212033)
chr4 (159-196)||(17329554-17329591)
chr4 (159-196)||(23389622-23389659)
chr4 (159-196)||(45081128-45081165)
chr4 (159-196)||(46914190-46914227)
chr4 (207-244)||(52773130-52773167)
chr4 (159-196)||(53181132-53181169)
chr4 (160-196)||(55598-55634)
chr4 (208-240)||(53347389-53347421)
chr4 (160-196)||(55408218-55408254)
chr4 (159-251)||(36658769-36658862)
chr4 (165-196)||(53347344-53347375)
chr4 (159-193)||(12159129-12159163)
chr4 (159-240)||(13093816-13093896)
chr4 (166-196)||(18469011-18469041)
chr4 (162-196)||(48403559-48403593)
chr4 (159-196)||(7401563-7401600)
chr4 (159-196)||(23539321-23539358)
chr4 (160-193)||(33527082-33527115)
chr4 (159-196)||(34434196-34434233)
chr4 (160-193)||(39048704-39048737)
chr4 (163-196)||(47749732-47749765)
chr4 (159-195)||(10090138-10090174)
chr4 (212-240)||(17329610-17329638)
chr4 (212-240)||(18469059-18469087)
chr4 (160-196)||(21047596-21047632)
chr4 (160-196)||(39113432-39113468)
[»] chr8 (33 HSPs)
chr8 (159-255)||(42860247-42860344)
chr8 (159-251)||(15056911-15057003)
chr8 (159-255)||(45100674-45100771)
chr8 (159-255)||(35932181-35932277)
chr8 (159-251)||(12272111-12272203)
chr8 (159-240)||(40283944-40284025)
chr8 (159-251)||(26631805-26631897)
chr8 (159-251)||(30470471-30470563)
chr8 (159-196)||(13817434-13817471)
chr8 (159-196)||(31129102-31129139)
chr8 (159-196)||(42861080-42861117)
chr8 (159-237)||(26244969-26245047)
chr8 (159-240)||(1633069-1633150)
chr8 (159-240)||(29732020-29732101)
chr8 (162-196)||(5214180-5214214)
chr8 (163-196)||(1954904-1954937)
chr8 (159-196)||(4625177-4625214)
chr8 (159-196)||(5736405-5736442)
chr8 (159-196)||(8449686-8449723)
chr8 (159-196)||(13783838-13783875)
chr8 (159-196)||(18028996-18029033)
chr8 (159-196)||(26748611-26748648)
chr8 (159-196)||(34954985-34955022)
chr8 (162-196)||(7511416-7511450)
chr8 (159-196)||(23550125-23550162)
chr8 (159-196)||(35101779-35101816)
chr8 (159-196)||(36912951-36912988)
chr8 (159-195)||(13497655-13497691)
chr8 (207-251)||(17744905-17744949)
chr8 (212-240)||(23550079-23550107)
chr8 (160-196)||(30289415-30289451)
chr8 (159-191)||(38204920-38204952)
chr8 (160-196)||(39810709-39810745)
[»] scaffold1905 (2 HSPs)
scaffold1905 (159-249)||(259-349)
scaffold1905 (159-240)||(1085-1166)
[»] chr5 (40 HSPs)
chr5 (159-255)||(13592565-13592662)
chr5 (159-255)||(19241633-19241728)
chr5 (159-255)||(23648713-23648809)
chr5 (159-255)||(23809763-23809859)
chr5 (159-251)||(31008053-31008145)
chr5 (159-255)||(42318209-42318305)
chr5 (14-66)||(19241823-19241875)
chr5 (159-243)||(4938427-4938511)
chr5 (207-255)||(29616190-29616238)
chr5 (160-251)||(34529066-34529157)
chr5 (161-243)||(42804440-42804521)
chr5 (159-243)||(27405837-27405921)
chr5 (159-196)||(3455211-3455248)
chr5 (159-196)||(4580392-4580429)
chr5 (159-196)||(27946004-27946041)
chr5 (159-251)||(30644688-30644782)
chr5 (159-196)||(31011730-31011767)
chr5 (159-196)||(32973038-32973075)
chr5 (159-196)||(36572052-36572089)
chr5 (159-196)||(40892175-40892212)
chr5 (159-240)||(4219068-4219150)
chr5 (159-240)||(25670460-25670540)
chr5 (159-193)||(7651359-7651393)
chr5 (159-251)||(41152527-41152619)
chr5 (159-196)||(9958067-9958104)
chr5 (207-244)||(13592710-13592747)
chr5 (159-196)||(25033571-25033608)
chr5 (159-196)||(25653207-25653244)
chr5 (159-196)||(29616135-29616172)
chr5 (159-196)||(32363108-32363145)
chr5 (159-195)||(7827497-7827533)
chr5 (160-196)||(14279218-14279254)
chr5 (159-240)||(23089872-23089953)
chr5 (159-196)||(8176020-8176057)
chr5 (159-196)||(13479243-13479280)
chr5 (207-240)||(13479295-13479328)
chr5 (159-196)||(21368637-21368674)
chr5 (160-196)||(12913234-12913270)
chr5 (160-196)||(15972969-15973005)
chr5 (160-196)||(37882130-37882166)
[»] chr6 (23 HSPs)
chr6 (159-255)||(10886564-10886660)
chr6 (159-243)||(12513363-12513447)
chr6 (159-251)||(635009-635102)
chr6 (159-240)||(26653807-26653888)
chr6 (159-240)||(26759776-26759857)
chr6 (159-196)||(6377131-6377168)
chr6 (159-251)||(8222441-8222535)
chr6 (159-196)||(8668819-8668856)
chr6 (159-196)||(17957999-17958036)
chr6 (159-241)||(30446602-30446687)
chr6 (159-196)||(34841860-34841897)
chr6 (159-243)||(12502246-12502331)
chr6 (162-251)||(32360076-32360165)
chr6 (159-196)||(198210-198247)
chr6 (159-196)||(2503728-2503765)
chr6 (159-196)||(24348861-24348898)
chr6 (159-196)||(29951725-29951762)
chr6 (159-196)||(34328783-34328820)
chr6 (160-196)||(6725324-6725360)
chr6 (212-243)||(34242743-34242774)
chr6 (160-196)||(7541326-7541362)
chr6 (212-240)||(24348807-24348835)
chr6 (160-196)||(34242791-34242827)
[»] scaffold0021 (1 HSPs)
scaffold0021 (159-196)||(109868-109905)
[»] scaffold0004 (1 HSPs)
scaffold0004 (159-240)||(106173-106254)
[»] scaffold0758 (1 HSPs)
scaffold0758 (159-196)||(6370-6407)
[»] scaffold0012 (1 HSPs)
scaffold0012 (160-249)||(124369-124458)
[»] scaffold1183 (1 HSPs)
scaffold1183 (160-196)||(28-64)


Alignment Details
Target: chr7 (Bit Score: 67; Significance: 7e-30; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 159 - 255
Target Start/End: Original strand, 28317733 - 28317829
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattattagctttgtattagccttt 255  Q
    ||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||||||||    
T  28317733 ctctataaatagagacttggatcatttgatttggacacagaaaaaaaatcaagtttttcactctcttaatcttattattagctttgtattagccttt 28317829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 159 - 251
Target Start/End: Original strand, 40300585 - 40300677
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattattagctttgtattagc 251  Q
    ||||||||||||||||||||||||||||||||||||||          |||||||||||| ||||||||||||||||||||||||||||||||    
T  40300585 ctctataaatagagacttggatcatttgatttggacacagaaaaaaaatcaagtttttcattctcttaatcttattattagctttgtattagc 40300677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 159 - 255
Target Start/End: Complemental strand, 42882024 - 42881928
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattattagctttgtattagccttt 255  Q
    ||||||||||||||| ||||||||||||||||||||||          ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  42882024 ctctataaatagagatttggatcatttgatttggacacagaaaaaaaatcaagtttttcactctcttaatcttatcattagctttgtattagccttt 42881928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 166 - 251
Target Start/End: Complemental strand, 22660296 - 22660211
Alignment:
Q  166 aatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattattagctttgtattagc 251  Q
    |||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||||    
T  22660296 aatagagacttggatcatttgatttggacacagaaaaaaaatcaagtttttcactctcttaatcttattattagctttgtattagc 22660211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 159 - 255
Target Start/End: Complemental strand, 30720539 - 30720444
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattattagctttgtattagccttt 255  Q
    |||||||||||||||||| |||||||||||||||||||          ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  30720539 ctctataaatagagacttagatcatttgatttggacacagaaaaaaa-tcaagtttttcacactcttaatcttattattagctttgtattagccttt 30720444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 159 - 255
Target Start/End: Original strand, 47159061 - 47159158
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnn-tcaagtttttcactctcttaatcttattattagctttgtattagccttt 255  Q
    ||||||||||||||||||| |||||||||| |||||||           ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  47159061 ctctataaatagagacttgaatcatttgatgtggacacagaaaaaaaaatcaagtttttcactctcttaatcttatcattagctttgtattagccttt 47159158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 159 - 243
Target Start/End: Complemental strand, 115094 - 115010
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattattagcttt 243  Q
    |||||||||||||||||| |||||||||| ||||||||          |||||||||||||||||||||||||||||||||||||    
T  115094 ctctataaatagagacttagatcatttgacttggacacaggaaaaaaatcaagtttttcactctcttaatcttattattagcttt 115010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 42882156 - 42882104
Alignment:
Q  14 agagaggaaatggataaaggaagacacatggcattatgtgattggctgcttgg 66  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  42882156 agagaggaaatggataaagcaagacacatgacattatgtgattggctgcttgg 42882104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 159 - 243
Target Start/End: Complemental strand, 38970470 - 38970384
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac--nnnnnnnnnntcaagtttttcactctcttaatcttattattagcttt 243  Q
    ||||||||||||||||||||||||||||||||||||||             ||||||||||||||||||||||||||||||||||||    
T  38970470 ctctataaatagagacttggatcatttgatttggacacagaaaaaaaaaaacaagtttttcactctcttaatcttattattagcttt 38970384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 159 - 251
Target Start/End: Original strand, 30630287 - 30630380
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac-nnnnnnnnnntcaagtttttcactctcttaatcttattattagctttgtattagc 251  Q
    ||||||||||||||||||||||||||||||||||||||           |||||||||||||| |||| |||||||||||| |||| |||||||    
T  30630287 ctctataaatagagacttggatcatttgatttggacacagaaaaaaaaatcaagtttttcactatcttcatcttattattatctttctattagc 30630380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 159 - 250
Target Start/End: Original strand, 33078456 - 33078548
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnnt-caagtttttcactctcttaatcttattattagctttgtattag 250  Q
    |||||||||||||||||| |||||||||||||||||||            ||||||||||| |||||||||||||||||||||||| ||||||    
T  33078456 ctctataaatagagactttgatcatttgatttggacacagaaaaaaaaaacaagtttttcattctcttaatcttattattagctttctattag 33078548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 196
Target Start/End: Complemental strand, 26815544 - 26815507
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac 196  Q
    ||||||||||||||||||||||||||||||||||||||    
T  26815544 ctctataaatagagacttggatcatttgatttggacac 26815507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 196
Target Start/End: Original strand, 33508254 - 33508291
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac 196  Q
    ||||||||||||||||||||||||||||||||||||||    
T  33508254 ctctataaatagagacttggatcatttgatttggacac 33508291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 196
Target Start/End: Complemental strand, 48985303 - 48985266
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac 196  Q
    ||||||||||||||||||||||||||||||||||||||    
T  48985303 ctctataaatagagacttggatcatttgatttggacac 48985266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 66
Target Start/End: Original strand, 47158919 - 47158971
Alignment:
Q  14 agagaggaaatggataaaggaagacacatggcattatgtgattggctgcttgg 66  Q
    ||||||||||||||||||||| || || |||||||| ||||||||||||||||    
T  47158919 agagaggaaatggataaaggaggatacgtggcattaagtgattggctgcttgg 47158971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 240
Target Start/End: Complemental strand, 37952196 - 37952115
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattattagc 240  Q
    ||||||||||||||||||| ||||||||||||||||||          |||   ||||||||||||||||||||||||||||    
T  37952196 ctctataaatagagacttgaatcatttgatttggacacagaaaaaaaatcataattttcactctcttaatcttattattagc 37952115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 159 - 243
Target Start/End: Complemental strand, 33379705 - 33379621
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattattagcttt 243  Q
    |||||||||||||||||||| |||||||||||||||||           ||||||||||||| |||| |||||||||||| ||||    
T  33379705 ctctataaatagagacttggttcatttgatttggacacaaaaaaaaaaccaagtttttcactatcttcatcttattattatcttt 33379621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 162 - 196
Target Start/End: Complemental strand, 36521914 - 36521880
Alignment:
Q  162 tataaatagagacttggatcatttgatttggacac 196  Q
    |||||||||||||||||||||||||||||||||||    
T  36521914 tataaatagagacttggatcatttgatttggacac 36521880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 159 - 251
Target Start/End: Complemental strand, 37888800 - 37888708
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattattagctttgtattagc 251  Q
    |||||||||||||||||||| |||||||||||||||||           ||||||||||||| |||| |||| ||||||| |||| |||||||    
T  37888800 ctctataaatagagacttggttcatttgatttggacacagaaaaaaaaccaagtttttcactatcttcatctaattattatctttctattagc 37888708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 196
Target Start/End: Complemental strand, 5813698 - 5813661
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac 196  Q
    |||||||||||||||||||| |||||||||||||||||    
T  5813698 ctctataaatagagacttggttcatttgatttggacac 5813661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 30566993 - 30566952
Alignment:
Q  208 caagtttttcactctcttaatcttattattagctttgtatta 249  Q
    ||||||||| |||||||||||||||||||||||||| |||||    
T  30566993 caagtttttaactctcttaatcttattattagctttctatta 30566952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 196
Target Start/End: Original strand, 32126903 - 32126940
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac 196  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  32126903 ctctacaaatagagacttggatcatttgatttggacac 32126940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 196
Target Start/End: Complemental strand, 32749372 - 32749335
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac 196  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  32749372 ctctataaatagagacttggaacatttgatttggacac 32749335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 196
Target Start/End: Original strand, 35028472 - 35028509
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac 196  Q
    |||||||||||||||||||| |||||||||||||||||    
T  35028472 ctctataaatagagacttggttcatttgatttggacac 35028509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 196
Target Start/End: Complemental strand, 39770149 - 39770112
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac 196  Q
    |||||||||||||||||| |||||||||||||||||||    
T  39770149 ctctataaatagagacttagatcatttgatttggacac 39770112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 163 - 196
Target Start/End: Complemental strand, 40690742 - 40690709
Alignment:
Q  163 ataaatagagacttggatcatttgatttggacac 196  Q
    ||||||||||||||||||||||||||||||||||    
T  40690742 ataaatagagacttggatcatttgatttggacac 40690709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 196
Target Start/End: Complemental strand, 22194651 - 22194615
Alignment:
Q  160 tctataaatagagacttggatcatttgatttggacac 196  Q
    |||||||||| ||||||||||||||||||||||||||    
T  22194651 tctataaataaagacttggatcatttgatttggacac 22194615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 196
Target Start/End: Original strand, 43570795 - 43570831
Alignment:
Q  160 tctataaatagagacttggatcatttgatttggacac 196  Q
    ||||||||||||||||||| |||||||||||||||||    
T  43570795 tctataaatagagacttggttcatttgatttggacac 43570831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 208 - 243
Target Start/End: Original strand, 43201639 - 43201674
Alignment:
Q  208 caagtttttcactctcttaatcttattattagcttt 243  Q
    ||||||||||||| ||||||||||||||||||||||    
T  43201639 caagtttttcactatcttaatcttattattagcttt 43201674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 159 - 196
Target Start/End: Complemental strand, 24793856 - 24793819
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac 196  Q
    |||||||||||||||||||| || ||||||||||||||    
T  24793856 ctctataaatagagacttggttcgtttgatttggacac 24793819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 160 - 193
Target Start/End: Original strand, 25038245 - 25038278
Alignment:
Q  160 tctataaatagagacttggatcatttgatttgga 193  Q
    ||||||||||||||||||| ||||||||||||||    
T  25038245 tctataaatagagacttggttcatttgatttgga 25038278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 159 - 196
Target Start/End: Original strand, 25217942 - 25217979
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac 196  Q
    ||||||||||||||| |||| |||||||||||||||||    
T  25217942 ctctataaatagagatttggttcatttgatttggacac 25217979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 159 - 196
Target Start/End: Complemental strand, 37888259 - 37888222
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac 196  Q
    ||||||||||||||| || |||||||||||||||||||    
T  37888259 ctctataaatagagatttagatcatttgatttggacac 37888222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 212 - 240
Target Start/End: Complemental strand, 20354624 - 20354596
Alignment:
Q  212 tttttcactctcttaatcttattattagc 240  Q
    |||||||||||||||||||||||||||||    
T  20354624 tttttcactctcttaatcttattattagc 20354596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 208 - 240
Target Start/End: Complemental strand, 37888208 - 37888176
Alignment:
Q  208 caagtttttcactctcttaatcttattattagc 240  Q
    |||||||||||||||||||||||||| ||||||    
T  37888208 caagtttttcactctcttaatcttatcattagc 37888176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 212 - 240
Target Start/End: Complemental strand, 38351980 - 38351952
Alignment:
Q  212 tttttcactctcttaatcttattattagc 240  Q
    |||||||||||||||||||||||||||||    
T  38351980 tttttcactctcttaatcttattattagc 38351952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 67; Significance: 7e-30; HSPs: 75)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 159 - 255
Target Start/End: Original strand, 51998890 - 51998986
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattattagctttgtattagccttt 255  Q
    ||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||||||||    
T  51998890 ctctataaatagagacttggatcatttgatttggacacagaaaaaaaatcaagtttttcactctcttaatcttattattagctttgtattagccttt 51998986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 159 - 255
Target Start/End: Original strand, 6044982 - 6045078
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattattagctttgtattagccttt 255  Q
    ||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  6044982 ctctataaatagagacttggatcatttgatttggacacagaaaaaaaatcaagtttttcactctcttaatcttatcattagctttgtattagccttt 6045078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 159 - 255
Target Start/End: Complemental strand, 42564366 - 42564270
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattattagctttgtattagccttt 255  Q
    |||||||||||||||||| |||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||||||||    
T  42564366 ctctataaatagagacttagatcatttgatttggacacagaaaaaaaatcaagtttttcactctcttaatcttattattagctttgtattagccttt 42564270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 159 - 255
Target Start/End: Complemental strand, 50734436 - 50734340
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattattagctttgtattagccttt 255  Q
    ||||||||||||||||||||||||||||||||||||||          |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  50734436 ctctataaatagagacttggatcatttgatttggacacagaaaaaaaatcaaatttttcactctcttaatcttattattagctttgtattagccttt 50734340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 159 - 255
Target Start/End: Original strand, 50778419 - 50778515
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattattagctttgtattagccttt 255  Q
    ||||||||||||||||||||||||||||||||||||||          |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  50778419 ctctataaatagagacttggatcatttgatttggacacagaaaaaaaatcaaatttttcactctcttaatcttattattagctttgtattagccttt 50778515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 159 - 255
Target Start/End: Original strand, 37182718 - 37182815
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnn-tcaagtttttcactctcttaatcttattattagctttgtattagccttt 255  Q
    ||||||||||||||||||||||||||||||||||||||           |||||||||||||||||||||||||||||||||||||||||||||||||    
T  37182718 ctctataaatagagacttggatcatttgatttggacacagaaaaaaaaatcaagtttttcactctcttaatcttattattagctttgtattagccttt 37182815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 159 - 255
Target Start/End: Original strand, 32120088 - 32120185
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnn-tcaagtttttcactctcttaatcttattattagctttgtattagccttt 255  Q
    ||||||||||||||||||||||||||||||||||||||           ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  32120088 ctctataaatagagacttggatcatttgatttggacacagaaaaaaaaatcaagttattcactctcttaatcttattattagctttgtattagccttt 32120185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 159 - 255
Target Start/End: Complemental strand, 44084729 - 44084632
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnn-tcaagtttttcactctcttaatcttattattagctttgtattagccttt 255  Q
    ||||||||||||||||||||||||||||||||||||||           ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  44084729 ctctataaatagagacttggatcatttgatttggacacagaaaaaaaaatcaagttattcactctcttaatcttattattagctttgtattagccttt 44084632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 159 - 251
Target Start/End: Complemental strand, 4046541 - 4046448
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnn-tcaagtttttcactctcttaatcttattattagctttgtattagc 251  Q
    ||||||||||||||||||| ||||||||||||||||||           |||||||||||||||||||||||||||||||||||||||||||||    
T  4046541 ctctataaatagagacttgaatcatttgatttggacacagaaaaaaaaatcaagtttttcactctcttaatcttattattagctttgtattagc 4046448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 159 - 251
Target Start/End: Complemental strand, 41183691 - 41183598
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnn-tcaagtttttcactctcttaatcttattattagctttgtattagc 251  Q
    ||||||||||||||||||||||||||||||||||||||           ||||||||||||||||||||||||||||||||||||||| |||||    
T  41183691 ctctataaatagagacttggatcatttgatttggacacagaaaaaaaaatcaagtttttcactctcttaatcttattattagctttgtgttagc 41183598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 159 - 255
Target Start/End: Original strand, 10424304 - 10424402
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnn--tcaagtttttcactctcttaatcttattattagctttgtattagccttt 255  Q
    |||||||||||||||||||||| |||||||||||||||            ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  10424304 ctctataaatagagacttggattatttgatttggacacagaaaaaaaaaatcaagtttttcactctcttaatcttatcattagctttgtattagccttt 10424402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 14 - 66
Target Start/End: Original strand, 6044836 - 6044888
Alignment:
Q  14 agagaggaaatggataaaggaagacacatggcattatgtgattggctgcttgg 66  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  6044836 agagaggaaatggataaagcaagacacatggcattatgtgattggctgcttgg 6044888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 14 - 66
Target Start/End: Original strand, 32119941 - 32119993
Alignment:
Q  14 agagaggaaatggataaaggaagacacatggcattatgtgattggctgcttgg 66  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  32119941 agagaggaaatggataaaggaagacacatggcattatatgattggctgcttgg 32119993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 44084874 - 44084822
Alignment:
Q  14 agagaggaaatggataaaggaagacacatggcattatgtgattggctgcttgg 66  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  44084874 agagaggaaatggataaaggaagacacatggcattatatgattggctgcttgg 44084822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 159 - 243
Target Start/End: Complemental strand, 20139977 - 20139893
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattattagcttt 243  Q
    ||||||||||||||||||||||||||||||||| |||           |||||||||||||||||||||||||||||||||||||    
T  20139977 ctctataaatagagacttggatcatttgatttgaacagagaaaaaaaatcaagtttttcactctcttaatcttattattagcttt 20139893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 159 - 243
Target Start/End: Complemental strand, 29702075 - 29701991
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattattagcttt 243  Q
    ||||||||||||||||||||||||||||||||||| ||          |||||||||||||||||||||||| ||||||||||||    
T  29702075 ctctataaatagagacttggatcatttgatttggatacagaaaaaaaatcaagtttttcactctcttaatctcattattagcttt 29701991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 159 - 251
Target Start/End: Complemental strand, 55027183 - 55027091
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattattagctttgtattagc 251  Q
    ||||||||||||||||||||||||||||||||||||||           ||||||||||||||||||||| ||||||||| |||| |||||||    
T  55027183 ctctataaatagagacttggatcatttgatttggacacagaaaaaaaaccaagtttttcactctcttaatattattattatctttctattagc 55027091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 159 - 235
Target Start/End: Complemental strand, 12975249 - 12975173
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttatta 235  Q
    ||||| ||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||    
T  12975249 ctctacaaatagagacttggatcatttgatttggacacagaaaaaaaatcaagtttttcactctcttaatcttatta 12975173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 159 - 240
Target Start/End: Original strand, 31169915 - 31169997
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac-nnnnnnnnnntcaagtttttcactctcttaatcttattattagc 240  Q
    ||||| ||||||||||||||||||||||||||||||||           ||||||||||||||||||||||||||||||||||    
T  31169915 ctctacaaatagagacttggatcatttgatttggacacagaaaaaaaaatcaagtttttcactctcttaatcttattattagc 31169997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 159 - 240
Target Start/End: Original strand, 46136922 - 46137003
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattattagc 240  Q
    |||||||||||||||||||||| ||||||||||||||           ||||||||||||||||||||||||| ||||||||    
T  46136922 ctctataaatagagacttggataatttgatttggacatagaaaaaaaatcaagtttttcactctcttaatctttttattagc 46137003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 159 - 251
Target Start/End: Complemental strand, 49086556 - 49086464
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattattagctttgtattagc 251  Q
    ||||||||||||||| |||| |||||||||||||||||          |||||||||||||| |||| |||||||||||| |||| |||||||    
T  49086556 ctctataaatagagatttggttcatttgatttggacacagaaaaaaaatcaagtttttcactatcttcatcttattattatctttctattagc 49086464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 196
Target Start/End: Original strand, 4873807 - 4873844
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac 196  Q
    ||||||||||||||||||||||||||||||||||||||    
T  4873807 ctctataaatagagacttggatcatttgatttggacac 4873844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 7008481 - 7008440
Alignment:
Q  208 caagtttttcactctcttaatcttattattagctttgtatta 249  Q
    |||||||||||||||||||||||||||||||||||| |||||    
T  7008481 caagtttttcactctcttaatcttattattagctttctatta 7008440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 196
Target Start/End: Original strand, 25787409 - 25787446
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac 196  Q
    ||||||||||||||||||||||||||||||||||||||    
T  25787409 ctctataaatagagacttggatcatttgatttggacac 25787446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 196
Target Start/End: Original strand, 25829366 - 25829403
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac 196  Q
    ||||||||||||||||||||||||||||||||||||||    
T  25829366 ctctataaatagagacttggatcatttgatttggacac 25829403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 196
Target Start/End: Original strand, 26162189 - 26162226
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac 196  Q
    ||||||||||||||||||||||||||||||||||||||    
T  26162189 ctctataaatagagacttggatcatttgatttggacac 26162226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 196
Target Start/End: Original strand, 30415111 - 30415148
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac 196  Q
    ||||||||||||||||||||||||||||||||||||||    
T  30415111 ctctataaatagagacttggatcatttgatttggacac 30415148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 196
Target Start/End: Original strand, 33934896 - 33934933
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac 196  Q
    ||||||||||||||||||||||||||||||||||||||    
T  33934896 ctctataaatagagacttggatcatttgatttggacac 33934933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 196
Target Start/End: Original strand, 38571797 - 38571834
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac 196  Q
    ||||||||||||||||||||||||||||||||||||||    
T  38571797 ctctataaatagagacttggatcatttgatttggacac 38571834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 196
Target Start/End: Original strand, 42598064 - 42598101
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac 196  Q
    ||||||||||||||||||||||||||||||||||||||    
T  42598064 ctctataaatagagacttggatcatttgatttggacac 42598101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 208 - 243
Target Start/End: Complemental strand, 6832983 - 6832948
Alignment:
Q  208 caagtttttcactctcttaatcttattattagcttt 243  Q
    ||||||||||||||||||||||||||||||||||||    
T  6832983 caagtttttcactctcttaatcttattattagcttt 6832948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 240
Target Start/End: Original strand, 35471967 - 35472048
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattattagc 240  Q
    ||||| ||||||||||||||||||||||||||||||||          |||  |||||||||||||||||||||| ||||||    
T  35471967 ctctacaaatagagacttggatcatttgatttggacacagaaaaaaaatcatatttttcactctcttaatcttataattagc 35472048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 208 - 243
Target Start/End: Original strand, 35540268 - 35540303
Alignment:
Q  208 caagtttttcactctcttaatcttattattagcttt 243  Q
    ||||||||||||||||||||||||||||||||||||    
T  35540268 caagtttttcactctcttaatcttattattagcttt 35540303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 243
Target Start/End: Complemental strand, 43475838 - 43475751
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac---nnnnnnnnnntcaagtttttcactctcttaatcttattattagcttt 243  Q
    |||||||||||||||||| |||||||||||||||||||              ||||||||||||||||||||||||||||||||||||    
T  43475838 ctctataaatagagactttgatcatttgatttggacacagaaaaaaaaaaaccaagtttttcactctcttaatcttattattagcttt 43475751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 159 - 193
Target Start/End: Complemental strand, 7008538 - 7008504
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttgga 193  Q
    |||||||||||||||||||||||||||||||||||    
T  7008538 ctctataaatagagacttggatcatttgatttgga 7008504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 159 - 235
Target Start/End: Original strand, 48886482 - 48886558
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttatta 235  Q
    ||||| |||||||||||| |||||||||||||||||||           ||||||||||||||||||||||||||||    
T  48886482 ctctacaaatagagactttgatcatttgatttggacacagaaaaaaaaccaagtttttcactctcttaatcttatta 48886558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 196
Target Start/End: Original strand, 5844672 - 5844709
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac 196  Q
    |||||||||||||||||||| |||||||||||||||||    
T  5844672 ctctataaatagagacttggttcatttgatttggacac 5844709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 66
Target Start/End: Original strand, 10424185 - 10424218
Alignment:
Q  33 gaagacacatggcattatgtgattggctgcttgg 66  Q
    ||||||||||||||||||||||||||||||||||    
T  10424185 gaagacacatggcattatgtgattggctgcttgg 10424218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 196
Target Start/End: Complemental strand, 11908458 - 11908421
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac 196  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  11908458 ctctacaaatagagacttggatcatttgatttggacac 11908421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 196
Target Start/End: Complemental strand, 17469836 - 17469799
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac 196  Q
    |||||||||||||||||||| |||||||||||||||||    
T  17469836 ctctataaatagagacttggttcatttgatttggacac 17469799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 196
Target Start/End: Original strand, 25450134 - 25450171
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac 196  Q
    |||||||||||||||||||| |||||||||||||||||    
T  25450134 ctctataaatagagacttggttcatttgatttggacac 25450171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 196
Target Start/End: Complemental strand, 27848005 - 27847968
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac 196  Q
    |||||||||||||||||||||||||||||||| |||||    
T  27848005 ctctataaatagagacttggatcatttgattttgacac 27847968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 196
Target Start/End: Complemental strand, 42602290 - 42602253
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac 196  Q
    |||||||||||||||||||| |||||||||||||||||    
T  42602290 ctctataaatagagacttggttcatttgatttggacac 42602253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 196
Target Start/End: Complemental strand, 47147693 - 47147656
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac 196  Q
    |||||||||||||||||||| |||||||||||||||||    
T  47147693 ctctataaatagagacttggttcatttgatttggacac 47147656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 196
Target Start/End: Complemental strand, 50034712 - 50034675
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac 196  Q
    |||||||||||||||||||| |||||||||||||||||    
T  50034712 ctctataaatagagacttggttcatttgatttggacac 50034675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 196
Target Start/End: Complemental strand, 51436047 - 51436010
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac 196  Q
    |||||||||||||||||| |||||||||||||||||||    
T  51436047 ctctataaatagagacttagatcatttgatttggacac 51436010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 196
Target Start/End: Complemental strand, 28410813 - 28410777
Alignment:
Q  160 tctataaatagagacttggatcatttgatttggacac 196  Q
    ||||||||||||||||||| |||||||||||||||||    
T  28410813 tctataaatagagacttggttcatttgatttggacac 28410777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 243
Target Start/End: Original strand, 33187764 - 33187846
Alignment:
Q  162 tataaatagagacttggatcatttgatttggacacnnnnnnnnnntc-aagtttttcactctcttaatcttattattagcttt 243  Q
    ||||||||||||||||||| |||||||||||||||           | |||||||||||||||| ||||||||||||||||||    
T  33187764 tataaatagagacttggattatttgatttggacacagaaaaaaaaaccaagtttttcactctctaaatcttattattagcttt 33187846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 196
Target Start/End: Original strand, 35852893 - 35852929
Alignment:
Q  160 tctataaatagagacttggatcatttgatttggacac 196  Q
    ||||||||||||||||||| |||||||||||||||||    
T  35852893 tctataaatagagacttggttcatttgatttggacac 35852929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 196
Target Start/End: Complemental strand, 43023022 - 43022986
Alignment:
Q  160 tctataaatagagacttggatcatttgatttggacac 196  Q
    ||||||||||||||||||| |||||||||||||||||    
T  43023022 tctataaatagagacttggttcatttgatttggacac 43022986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 196
Target Start/End: Original strand, 46572610 - 46572646
Alignment:
Q  160 tctataaatagagacttggatcatttgatttggacac 196  Q
    ||||||||||||||||||| |||||||||||||||||    
T  46572610 tctataaatagagacttggttcatttgatttggacac 46572646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 207 - 243
Target Start/End: Original strand, 49407022 - 49407058
Alignment:
Q  207 tcaagtttttcactctcttaatcttattattagcttt 243  Q
    ||||||||||||| |||||||||||||||||||||||    
T  49407022 tcaagtttttcaccctcttaatcttattattagcttt 49407058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 160 - 195
Target Start/End: Original strand, 15493431 - 15493466
Alignment:
Q  160 tctataaatagagacttggatcatttgatttggaca 195  Q
    ||||||||||||||||||| ||||||||||||||||    
T  15493431 tctataaatagagacttggttcatttgatttggaca 15493466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 208 - 250
Target Start/End: Complemental strand, 15007566 - 15007524
Alignment:
Q  208 caagtttttcactctcttaatcttattattagctttgtattag 250  Q
    ||||||||||| ||||||||||||||||||| |||| ||||||    
T  15007566 caagtttttcattctcttaatcttattattaactttctattag 15007524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 251
Target Start/End: Complemental strand, 50020415 - 50020325
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattattagctttgtattagc 251  Q
    |||||||||||||||||||| |||||||||||| ||||           ||||||||||||| |||| |||||||||||| |||| |||||||    
T  50020415 ctctataaatagagacttggttcatttgatttgaacacaaaaaaaac--caagtttttcactatcttcatcttattattatctttctattagc 50020325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 240
Target Start/End: Complemental strand, 51304980 - 51304897
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnn--tcaagtttttcactctcttaatcttattattagc 240  Q
    ||||| ||||||| ||||||||||||||||||||||||            |||| |||||||||||||||||||||||||||||    
T  51304980 ctctacaaatagaaacttggatcatttgatttggacacagaaaaaaaaaatcaaatttttcactctcttaatcttattattagc 51304897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 207 - 244
Target Start/End: Complemental strand, 4046396 - 4046359
Alignment:
Q  207 tcaagtttttcactctcttaatcttattattagctttg 244  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  4046396 tcaaatttttcactctcttaatcttattattagatttg 4046359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 159 - 196
Target Start/End: Complemental strand, 6833034 - 6832997
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac 196  Q
    ||||| ||||||||||||||||||||||||||| ||||    
T  6833034 ctctacaaatagagacttggatcatttgatttgaacac 6832997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 159 - 196
Target Start/End: Original strand, 7520781 - 7520818
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac 196  Q
    |||||||||||||||||||| | |||||||||||||||    
T  7520781 ctctataaatagagacttggtttatttgatttggacac 7520818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 159 - 192
Target Start/End: Complemental strand, 33751733 - 33751700
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttgg 192  Q
    |||||||||||||||||||| |||||||||||||    
T  33751733 ctctataaatagagacttggttcatttgatttgg 33751700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 159 - 196
Target Start/End: Original strand, 35540217 - 35540254
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac 196  Q
    |||||||||||||||||||||| ||||||||| |||||    
T  35540217 ctctataaatagagacttggataatttgattttgacac 35540254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 159 - 196
Target Start/End: Original strand, 36178134 - 36178171
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac 196  Q
    ||||| ||||||| ||||||||||||||||||||||||    
T  36178134 ctctacaaatagaaacttggatcatttgatttggacac 36178171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 159 - 196
Target Start/End: Original strand, 37410138 - 37410175
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac 196  Q
    |||||||||||||||||||| |||||| ||||||||||    
T  37410138 ctctataaatagagacttggttcatttaatttggacac 37410175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 38571850 - 38571891
Alignment:
Q  208 caagtttttcactctcttaatcttattattagctttgtatta 249  Q
    ||||||||||| |||||||||||||||||||| ||| |||||    
T  38571850 caagtttttcattctcttaatcttattattagttttctatta 38571891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 167 - 196
Target Start/End: Original strand, 49027075 - 49027104
Alignment:
Q  167 atagagacttggatcatttgatttggacac 196  Q
    ||||||||||||||||||||||||||||||    
T  49027075 atagagacttggatcatttgatttggacac 49027104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 159 - 196
Target Start/End: Original strand, 49356939 - 49356976
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac 196  Q
    |||| ||||||||||||||| |||||||||||||||||    
T  49356939 ctctttaaatagagacttggttcatttgatttggacac 49356976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 159 - 196
Target Start/End: Original strand, 49822598 - 49822635
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac 196  Q
    ||||||||||||| |||||||| |||||||||||||||    
T  49822598 ctctataaatagaaacttggataatttgatttggacac 49822635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 212 - 240
Target Start/End: Complemental strand, 11908403 - 11908375
Alignment:
Q  212 tttttcactctcttaatcttattattagc 240  Q
    |||||||||||||||||||||||||||||    
T  11908403 tttttcactctcttaatcttattattagc 11908375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 195
Target Start/End: Complemental strand, 15007617 - 15007581
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggaca 195  Q
    ||||||||||| ||||||||||| |||||||||||||    
T  15007617 ctctataaataaagacttggatcttttgatttggaca 15007581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 196
Target Start/End: Original strand, 26549895 - 26549931
Alignment:
Q  160 tctataaatagagacttggatcatttgatttggacac 196  Q
    |||||||||| |||||||| |||||||||||||||||    
T  26549895 tctataaataaagacttggttcatttgatttggacac 26549931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 251
Target Start/End: Complemental strand, 33751683 - 33751639
Alignment:
Q  207 tcaagtttttcactctcttaatcttattattagctttgtattagc 251  Q
    |||||||||||||| |||| |||||||||||| |||| |||||||    
T  33751683 tcaagtttttcactatcttcatcttattattatctttctattagc 33751639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 212 - 240
Target Start/End: Original strand, 49027122 - 49027150
Alignment:
Q  212 tttttcactctcttaatcttattattagc 240  Q
    |||||||||||||||||||||||||||||    
T  49027122 tttttcactctcttaatcttattattagc 49027150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 196
Target Start/End: Original strand, 49146972 - 49147008
Alignment:
Q  160 tctataaatagagacttggatcatttgatttggacac 196  Q
    |||||||||||||| |||| |||||||||||||||||    
T  49146972 tctataaatagagaattggttcatttgatttggacac 49147008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 196
Target Start/End: Original strand, 49710155 - 49710191
Alignment:
Q  160 tctataaatagagacttggatcatttgatttggacac 196  Q
    ||||||||||||||||||| ||||||||||| |||||    
T  49710155 tctataaatagagacttggttcatttgattttgacac 49710191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 196
Target Start/End: Complemental strand, 53722911 - 53722875
Alignment:
Q  160 tctataaatagagacttggatcatttgatttggacac 196  Q
    ||||||||||||||||| | |||||||||||||||||    
T  53722911 tctataaatagagactttgttcatttgatttggacac 53722875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 67; Significance: 7e-30; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 159 - 255
Target Start/End: Complemental strand, 14383391 - 14383295
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattattagctttgtattagccttt 255  Q
    ||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||||||||    
T  14383391 ctctataaatagagacttggatcatttgatttggacacagaaaaaaaatcaagtttttcactctcttaatcttattattagctttgtattagccttt 14383295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 159 - 255
Target Start/End: Original strand, 22349552 - 22349648
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattattagctttgtattagccttt 255  Q
    ||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  22349552 ctctataaatagagacttggatcatttgatttggacacagaaaaaaaatcaagtttttcactctcttaatcttatcattagctttgtattagccttt 22349648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 159 - 255
Target Start/End: Complemental strand, 44280538 - 44280442
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattattagctttgtattagccttt 255  Q
    ||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  44280538 ctctataaatagagacttggatcatttgatttggacacagaaaaaaaatcaagtttttcactctcttaatcttattattagctttgtattagtcttt 44280442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 159 - 255
Target Start/End: Complemental strand, 36527242 - 36527144
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnn--tcaagtttttcactctcttaatcttattattagctttgtattagccttt 255  Q
    ||||||||||||||||||||||||||||||||||||||            |||||||||||||||||||||||||||||||||||||||||||||||||    
T  36527242 ctctataaatagagacttggatcatttgatttggacacagaaaaaaaaaatcaagtttttcactctcttaatcttattattagctttgtattagccttt 36527144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 14 - 66
Target Start/End: Original strand, 22349406 - 22349458
Alignment:
Q  14 agagaggaaatggataaaggaagacacatggcattatgtgattggctgcttgg 66  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  22349406 agagaggaaatggataaagcaagacacatggcattatgtgattggctgcttgg 22349458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 159 - 251
Target Start/End: Original strand, 1072712 - 1072805
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac-nnnnnnnnnntcaagtttttcactctcttaatcttattattagctttgtattagc 251  Q
    ||||||||||||||||||||||||||||||||||||||           |||||||||||||||||||||||||||||||| |||| |||||||    
T  1072712 ctctataaatagagacttggatcatttgatttggacacagagaaaaaaatcaagtttttcactctcttaatcttattattatctttctattagc 1072805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 159 - 255
Target Start/End: Complemental strand, 43022114 - 43022015
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnn---tcaagtttttcactctcttaatcttattattagctttgtattagccttt 255  Q
    ||||||||||||||||||||||||||||||||||||||             ||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  43022114 ctctataaatagagacttggatcatttgatttggacacagaaaaaaaaaaatcaagtttttcactctcttaatcttatcattagatttgtattagccttt 43022015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 43022249 - 43022197
Alignment:
Q  14 agagaggaaatggataaaggaagacacatggcattatgtgattggctgcttgg 66  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  43022249 agagaggaaatggataaagcaagacacatgacattatgtgattggctgcttgg 43022197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 159 - 240
Target Start/End: Original strand, 7762833 - 7762914
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattattagc 240  Q
    ||||| ||||||||||||||||||||||||||||||||          |||| |||||||||||||||||||||||||||||    
T  7762833 ctctacaaatagagacttggatcatttgatttggacacagaaaaaaaatcaaatttttcactctcttaatcttattattagc 7762914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 159 - 251
Target Start/End: Original strand, 926502 - 926594
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattattagctttgtattagc 251  Q
    |||||||||||||||||||| |||||||||||||||||           ||||||||||||| ||||||||||||||||| |||| |||||||    
T  926502 ctctataaatagagacttggttcatttgatttggacacagaaaaaaaaccaagtttttcactatcttaatcttattattatctttctattagc 926594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 159 - 243
Target Start/End: Complemental strand, 4279513 - 4279428
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnn-tcaagtttttcactctcttaatcttattattagcttt 243  Q
    ||||| |||||||||||||||||||||||||| |||||           |||||||||||||||||||||||||||||||||||||    
T  4279513 ctctacaaatagagacttggatcatttgattttgacacagaaaaaaaaatcaagtttttcactctcttaatcttattattagcttt 4279428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 159 - 251
Target Start/End: Complemental strand, 9118246 - 9118153
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac-nnnnnnnnnntcaagtttttcactctcttaatcttattattagctttgtattagc 251  Q
    ||||||||||||||||||||||||||||||||||||||            ||||||||||||||||||||| ||||||||| |||| |||||||    
T  9118246 ctctataaatagagacttggatcatttgatttggacacagaaaaaaaaaccaagtttttcactctcttaatattattattatctttctattagc 9118153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 159 - 251
Target Start/End: Complemental strand, 12858311 - 12858218
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac-nnnnnnnnnntcaagtttttcactctcttaatcttattattagctttgtattagc 251  Q
    ||||||||||||||||||||||||||||||||||||||           |||||||||||||| |||| |||||||||||| |||| |||||||    
T  12858311 ctctataaatagagacttggatcatttgatttggacacagaaaaaaaaatcaagtttttcactatcttcatcttattattatctttctattagc 12858218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 159 - 251
Target Start/End: Original strand, 30819318 - 30819411
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac-nnnnnnnnnntcaagtttttcactctcttaatcttattattagctttgtattagc 251  Q
    ||||||||||||||||||||||||||||||||||||||           |||||||||||||| |||| |||||||||||| |||| |||||||    
T  30819318 ctctataaatagagacttggatcatttgatttggacacagaaaaaaaaatcaagtttttcactatcttcatcttattattatctttctattagc 30819411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 196
Target Start/End: Original strand, 7585184 - 7585221
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac 196  Q
    ||||||||||||||||||||||||||||||||||||||    
T  7585184 ctctataaatagagacttggatcatttgatttggacac 7585221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 196
Target Start/End: Original strand, 9072621 - 9072658
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac 196  Q
    ||||||||||||||||||||||||||||||||||||||    
T  9072621 ctctataaatagagacttggatcatttgatttggacac 9072658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 196
Target Start/End: Original strand, 39432412 - 39432449
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac 196  Q
    ||||||||||||||||||||||||||||||||||||||    
T  39432412 ctctataaatagagacttggatcatttgatttggacac 39432449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 207 - 243
Target Start/End: Original strand, 14151938 - 14151974
Alignment:
Q  207 tcaagtttttcactctcttaatcttattattagcttt 243  Q
    |||||||||||||||||||||||||||||||||||||    
T  14151938 tcaagtttttcactctcttaatcttattattagcttt 14151974  T

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Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 196
Target Start/End: Original strand, 1308331 - 1308368
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac 196  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  1308331 ctctacaaatagagacttggatcatttgatttggacac 1308368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 196
Target Start/End: Complemental strand, 1987564 - 1987527
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac 196  Q
    |||||||||||||||||||| |||||||||||||||||    
T  1987564 ctctataaatagagacttggttcatttgatttggacac 1987527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 196
Target Start/End: Original strand, 4296303 - 4296340
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac 196  Q
    |||||||||||||||||||| |||||||||||||||||    
T  4296303 ctctataaatagagacttggttcatttgatttggacac 4296340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 196
Target Start/End: Complemental strand, 8855419 - 8855382
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac 196  Q
    |||||||||||||||||||| |||||||||||||||||    
T  8855419 ctctataaatagagacttggttcatttgatttggacac 8855382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 196
Target Start/End: Original strand, 13151232 - 13151269
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac 196  Q
    |||||||||||||||||||||||||||||||| |||||    
T  13151232 ctctataaatagagacttggatcatttgatttcgacac 13151269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 196
Target Start/End: Original strand, 17928855 - 17928892
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac 196  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  17928855 ctctacaaatagagacttggatcatttgatttggacac 17928892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 196
Target Start/End: Original strand, 36855056 - 36855093
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac 196  Q
    |||||||||||||||||||| |||||||||||||||||    
T  36855056 ctctataaatagagacttggttcatttgatttggacac 36855093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 207 - 244
Target Start/End: Complemental strand, 44280394 - 44280357
Alignment:
Q  207 tcaagtttttcactctcttaatcttattattagctttg 244  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  44280394 tcaagtttttcactctcttaatcttattattagatttg 44280357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 208 - 240
Target Start/End: Original strand, 5145077 - 5145109
Alignment:
Q  208 caagtttttcactctcttaatcttattattagc 240  Q
    |||||||||||||||||||||||||||||||||    
T  5145077 caagtttttcactctcttaatcttattattagc 5145109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 195
Target Start/End: Original strand, 31184938 - 31184974
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggaca 195  Q
    |||||||||||||||||||| ||||||||||||||||    
T  31184938 ctctataaatagagacttggttcatttgatttggaca 31184974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 196
Target Start/End: Original strand, 43494918 - 43494954
Alignment:
Q  160 tctataaatagagacttggatcatttgatttggacac 196  Q
    ||||||||||||||||||| |||||||||||||||||    
T  43494918 tctataaatagagacttggttcatttgatttggacac 43494954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 212 - 243
Target Start/End: Original strand, 13151287 - 13151318
Alignment:
Q  212 tttttcactctcttaatcttattattagcttt 243  Q
    ||||||||||||||||||||||||||||||||    
T  13151287 tttttcactctcttaatcttattattagcttt 13151318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 196
Target Start/End: Original strand, 5145027 - 5145057
Alignment:
Q  166 aatagagacttggatcatttgatttggacac 196  Q
    |||||||||||||||||||||||||||||||    
T  5145027 aatagagacttggatcatttgatttggacac 5145057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 208 - 250
Target Start/End: Original strand, 31184988 - 31185030
Alignment:
Q  208 caagtttttcactctcttaatcttattattagctttgtattag 250  Q
    ||||||||||||| ||||||||||||||||| |||| ||||||    
T  31184988 caagtttttcactatcttaatcttattattatctttctattag 31185030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 208 - 250
Target Start/End: Original strand, 31204714 - 31204756
Alignment:
Q  208 caagtttttcactctcttaatcttattattagctttgtattag 250  Q
    ||||||||||||| ||||||||||||||||| |||| ||||||    
T  31204714 caagtttttcactatcttaatcttattattatctttctattag 31204756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 159 - 196
Target Start/End: Original strand, 2778797 - 2778834
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac 196  Q
    |||||||||||||||||||| | |||||||||||||||    
T  2778797 ctctataaatagagacttggtttatttgatttggacac 2778834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 159 - 196
Target Start/End: Original strand, 36209112 - 36209149
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac 196  Q
    ||||| |||||||||||||||||||||||||| |||||    
T  36209112 ctctacaaatagagacttggatcatttgatttagacac 36209149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 159 - 196
Target Start/End: Complemental strand, 37246074 - 37246037
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac 196  Q
    |||||||||||||||||||| |||||| ||||||||||    
T  37246074 ctctataaatagagacttggttcatttaatttggacac 37246037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 251
Target Start/End: Complemental strand, 1987513 - 1987469
Alignment:
Q  207 tcaagtttttcactctcttaatcttattattagctttgtattagc 251  Q
    |||||||||||||| |||| |||||||||||| |||| |||||||    
T  1987513 tcaagtttttcactatcttcatcttattattatctttctattagc 1987469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 195
Target Start/End: Original strand, 31204664 - 31204700
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggaca 195  Q
    |||| ||||||||||||||| ||||||||||||||||    
T  31204664 ctctgtaaatagagacttggttcatttgatttggaca 31204700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 67; Significance: 7e-30; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 159 - 255
Target Start/End: Original strand, 45623181 - 45623277
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattattagctttgtattagccttt 255  Q
    ||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||||||||    
T  45623181 ctctataaatagagacttggatcatttgatttggacacagaaaaaaaatcaagtttttcactctcttaatcttattattagctttgtattagccttt 45623277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 159 - 255
Target Start/End: Original strand, 51494124 - 51494220
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattattagctttgtattagccttt 255  Q
    ||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  51494124 ctctataaatagagacttggatcatttgatttggacacagaaaaaaaatcaagtttttcactctcttaatcttattattagttttgtattagccttt 51494220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 159 - 255
Target Start/End: Original strand, 37690946 - 37691041
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattattagctttgtattagccttt 255  Q
    ||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||||||||    
T  37690946 ctctataaatagagacttggatcatttgatttggacacagaaaaaaa-tcaagtttttcactctcttaatcttattattagctttgtattagccttt 37691041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 159 - 255
Target Start/End: Complemental strand, 29919789 - 29919693
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattattagctttgtattagccttt 255  Q
    ||||||||||||||||||||||||||||||||| ||||          |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  29919789 ctctataaatagagacttggatcatttgatttgaacacagaaaaaaaatcaaatttttcactctcttaatcttattattagctttgtattagccttt 29919693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 159 - 255
Target Start/End: Original strand, 48384829 - 48384925
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattattagctttgtattagccttt 255  Q
    |||||||||||||||||||||||||||||||||||| |          ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  48384829 ctctataaatagagacttggatcatttgatttggacgcagaaaaaaaatcaagtttttcactctcttaatcttatcattagctttgtattagccttt 48384925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 159 - 251
Target Start/End: Original strand, 10265684 - 10265776
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattattagctttgtattagc 251  Q
    ||||||||||||||||||||||||||||||||||||||          ||||  ||||||||||||||||||||||||||||||| |||||||    
T  10265684 ctctataaatagagacttggatcatttgatttggacacagaaaaaaaatcaaaattttcactctcttaatcttattattagctttctattagc 10265776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 159 - 243
Target Start/End: Complemental strand, 43739451 - 43739367
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattattagcttt 243  Q
    ||||||||||||||||||| ||||||||||||||||||          |||||||||||||||||||||||||||||||||||||    
T  43739451 ctctataaatagagacttgaatcatttgatttggacacaggaaaaaaatcaagtttttcactctcttaatcttattattagcttt 43739367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 159 - 255
Target Start/End: Complemental strand, 14097109 - 14097011
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnn--tcaagtttttcactctcttaatcttattattagctttgtattagccttt 255  Q
    |||||||||||||||||| ||| |||||||||||||||            |||||||||||||||||||||||||||||||||||||||||||||||||    
T  14097109 ctctataaatagagactttgattatttgatttggacacagaaaaaaaaaatcaagtttttcactctcttaatcttattattagctttgtattagccttt 14097011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 159 - 255
Target Start/End: Original strand, 19578562 - 19578660
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnnt--caagtttttcactctcttaatcttattattagctttgtattagccttt 255  Q
    ||||||||||||||||||||||||||||||||||||||             |||||||||||||||||||||||||||||||| |||||||||||||||    
T  19578562 ctctataaatagagacttggatcatttgatttggacacagaaaaaaaaaaccaagtttttcactctcttaatcttattattagttttgtattagccttt 19578660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 167 - 251
Target Start/End: Complemental strand, 31159844 - 31159761
Alignment:
Q  167 atagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattattagctttgtattagc 251  Q
    ||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||||    
T  31159844 atagagacttggatcatttgatttggacacagaaaaaaa-tcaagtttttcactctcttaatcttattattagctttgtattagc 31159761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 14 - 66
Target Start/End: Original strand, 48384682 - 48384734
Alignment:
Q  14 agagaggaaatggataaaggaagacacatggcattatgtgattggctgcttgg 66  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  48384682 agagaggaaatggataaagcaagacacatggcattatgtgattggctgcttgg 48384734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 31159990 - 31159937
Alignment:
Q  14 agagaggaaatggataaagg-aagacacatggcattatgtgattggctgcttgg 66  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  31159990 agagaggaaatggataaagggaagacacatggcattatgtgattggctgcttgg 31159937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 159 - 243
Target Start/End: Original strand, 17675995 - 17676078
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattattagcttt 243  Q
    ||||||||||||||||||||||||||||||||||||||           ||| ||||||||||||||||||||||||||||||||    
T  17675995 ctctataaatagagacttggatcatttgatttggacacaaaaaaaaac-caaatttttcactctcttaatcttattattagcttt 17676078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 159 - 238
Target Start/End: Complemental strand, 33167635 - 33167556
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattatta 238  Q
    ||||||||||||||||||| ||||||||||||||||||          |||| |||||||||||||||||||||||||||    
T  33167635 ctctataaatagagacttgaatcatttgatttggacacagaaaaaaaatcaaatttttcactctcttaatcttattatta 33167556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 159 - 251
Target Start/End: Complemental strand, 48407792 - 48407698
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnn--tcaagtttttcactctcttaatcttattattagctttgtattagc 251  Q
    ||||||||||||||||||| ||||||||||||| ||||            |||||||||||||||||||||||||||||||| ||||||||||||    
T  48407792 ctctataaatagagacttgaatcatttgatttgaacacagaaaaaaaaaatcaagtttttcactctcttaatcttattattaactttgtattagc 48407698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 159 - 251
Target Start/End: Complemental strand, 45242472 - 45242379
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac-nnnnnnnnnntcaagtttttcactctcttaatcttattattagctttgtattagc 251  Q
    ||||||||||||||||||||||||||||||||||||||           |||||||||||||| |||| |||||||||||| |||| |||||||    
T  45242472 ctctataaatagagacttggatcatttgatttggacacagaaaaaaaaatcaagtttttcactatcttcatcttattattatctttctattagc 45242379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 159 - 240
Target Start/End: Original strand, 51156335 - 51156416
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattattagc 240  Q
    ||||||||||||||||||||||||||||||||||||||          |||  |||||||||||||||||||||| ||||||    
T  51156335 ctctataaatagagacttggatcatttgatttggacacagaaaaaaaatcatatttttcactctcttaatcttataattagc 51156416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 196
Target Start/End: Original strand, 643502 - 643539
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac 196  Q
    ||||||||||||||||||||||||||||||||||||||    
T  643502 ctctataaatagagacttggatcatttgatttggacac 643539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 196
Target Start/End: Original strand, 2474774 - 2474811
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac 196  Q
    ||||||||||||||||||||||||||||||||||||||    
T  2474774 ctctataaatagagacttggatcatttgatttggacac 2474811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 196
Target Start/End: Complemental strand, 8471633 - 8471596
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac 196  Q
    ||||||||||||||||||||||||||||||||||||||    
T  8471633 ctctataaatagagacttggatcatttgatttggacac 8471596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 165 - 239
Target Start/End: Original strand, 30878290 - 30878363
Alignment:
Q  165 aaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattattag 239  Q
    ||||||||||||||||||||||||||||||||           ||||||||||||||||||||||||||||||||    
T  30878290 aaatagagacttggatcatttgatttggacacagaaaaaaac-caagtttttcactctcttaatcttattattag 30878363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 240
Target Start/End: Complemental strand, 37823022 - 37822942
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattattagc 240  Q
    ||||| ||||||||||||||||||||||||||||||||           ||| |||||||||||||||||||||||||||||    
T  37823022 ctctacaaatagagacttggatcatttgatttggacacaaaaaaaaac-caaatttttcactctcttaatcttattattagc 37822942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 243
Target Start/End: Complemental strand, 51523687 - 51523602
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac-nnnnnnnnnntcaagtttttcactctcttaatcttattattagcttt 243  Q
    |||||||||||||||||||||||||||||||| |||||            |||||||||||||||||||||||| |||||||||||    
T  51523687 ctctataaatagagacttggatcatttgatttagacacaaaaaaaaaaaccaagtttttcactctcttaatctttttattagcttt 51523602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 162 - 196
Target Start/End: Complemental strand, 36231341 - 36231307
Alignment:
Q  162 tataaatagagacttggatcatttgatttggacac 196  Q
    |||||||||||||||||||||||||||||||||||    
T  36231341 tataaatagagacttggatcatttgatttggacac 36231307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 196
Target Start/End: Complemental strand, 8464987 - 8464950
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac 196  Q
    |||||||||||||||||||| |||||||||||||||||    
T  8464987 ctctataaatagagacttggttcatttgatttggacac 8464950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 196
Target Start/End: Original strand, 27629992 - 27630029
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac 196  Q
    |||||||||||||||||||| |||||||||||||||||    
T  27629992 ctctataaatagagacttggttcatttgatttggacac 27630029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 196
Target Start/End: Complemental strand, 29524324 - 29524287
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac 196  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  29524324 ctctacaaatagagacttggatcatttgatttggacac 29524287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 196
Target Start/End: Complemental strand, 31471608 - 31471571
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac 196  Q
    |||||||||||||||||||| |||||||||||||||||    
T  31471608 ctctataaatagagacttggttcatttgatttggacac 31471571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 196
Target Start/End: Original strand, 37419876 - 37419913
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac 196  Q
    |||||||||||||||||||| |||||||||||||||||    
T  37419876 ctctataaatagagacttggttcatttgatttggacac 37419913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 196
Target Start/End: Complemental strand, 45363901 - 45363864
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac 196  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  45363901 ctctacaaatagagacttggatcatttgatttggacac 45363864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 195
Target Start/End: Original strand, 37646089 - 37646125
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggaca 195  Q
    |||||||||||||||||||| ||||||||||||||||    
T  37646089 ctctataaatagagacttggttcatttgatttggaca 37646125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 195
Target Start/End: Original strand, 44450917 - 44450953
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggaca 195  Q
    |||||||||||||||||||| ||||||||||||||||    
T  44450917 ctctataaatagagacttggttcatttgatttggaca 44450953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 195
Target Start/End: Complemental strand, 44651495 - 44651459
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggaca 195  Q
    |||||||||||||||||||| ||||||||||||||||    
T  44651495 ctctataaatagagacttggttcatttgatttggaca 44651459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 208 - 251
Target Start/End: Complemental strand, 8464936 - 8464893
Alignment:
Q  208 caagtttttcactctcttaatcttattattagctttgtattagc 251  Q
    ||||||||||||| ||||||||||||||||| |||| |||||||    
T  8464936 caagtttttcactatcttaatcttattattatctttctattagc 8464893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 208 - 239
Target Start/End: Complemental strand, 36231285 - 36231254
Alignment:
Q  208 caagtttttcactctcttaatcttattattag 239  Q
    ||||||||||||||||||||||||||||||||    
T  36231285 caagtttttcactctcttaatcttattattag 36231254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 212 - 243
Target Start/End: Original strand, 47297295 - 47297326
Alignment:
Q  212 tttttcactctcttaatcttattattagcttt 243  Q
    ||||||||||||||||||||||||||||||||    
T  47297295 tttttcactctcttaatcttattattagcttt 47297326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 159 - 196
Target Start/End: Complemental strand, 17786666 - 17786629
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac 196  Q
    |||||||||||||||||||| |||||||||||| ||||    
T  17786666 ctctataaatagagacttggttcatttgatttgtacac 17786629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 159 - 196
Target Start/End: Original strand, 52930344 - 52930381
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac 196  Q
    |||||||||||||||||||| |||||||||||| ||||    
T  52930344 ctctataaatagagacttggttcatttgatttgaacac 52930381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 196
Target Start/End: Original strand, 3754708 - 3754744
Alignment:
Q  160 tctataaatagagacttggatcatttgatttggacac 196  Q
    |||||||||||||| |||| |||||||||||||||||    
T  3754708 tctataaatagagaattggttcatttgatttggacac 3754744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 212 - 240
Target Start/End: Complemental strand, 8471579 - 8471551
Alignment:
Q  212 tttttcactctcttaatcttattattagc 240  Q
    |||||||||||||||||||||||||||||    
T  8471579 tttttcactctcttaatcttattattagc 8471551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 251
Target Start/End: Complemental strand, 17786616 - 17786572
Alignment:
Q  207 tcaagtttttcactctcttaatcttattattagctttgtattagc 251  Q
    |||||||||||||| |||| |||||||||||| |||| |||||||    
T  17786616 tcaagtttttcactatcttcatcttattattatctttctattagc 17786572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 196
Target Start/End: Original strand, 20584473 - 20584509
Alignment:
Q  160 tctataaatagagacttggatcatttgatttggacac 196  Q
    ||||||||||||||||||| ||||||||||| |||||    
T  20584473 tctataaatagagacttggttcatttgattttgacac 20584509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 212 - 240
Target Start/End: Complemental strand, 29524267 - 29524239
Alignment:
Q  212 tttttcactctcttaatcttattattagc 240  Q
    |||||||||||||||||||||||||||||    
T  29524267 tttttcactctcttaatcttattattagc 29524239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 196
Target Start/End: Original strand, 47297242 - 47297278
Alignment:
Q  160 tctataaatagagacttggatcatttgatttggacac 196  Q
    |||||||||||||||||| ||||||| ||||||||||    
T  47297242 tctataaatagagacttgaatcatttcatttggacac 47297278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 196
Target Start/End: Complemental strand, 48927295 - 48927259
Alignment:
Q  160 tctataaatagagacttggatcatttgatttggacac 196  Q
    ||||||||||||| ||||| |||||||||||||||||    
T  48927295 tctataaatagaggcttggttcatttgatttggacac 48927259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 63; Significance: 2e-27; HSPs: 59)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 159 - 255
Target Start/End: Complemental strand, 8995175 - 8995079
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattattagctttgtattagccttt 255  Q
    ||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  8995175 ctctataaatagagacttggatcatttgatttggacacagaaaaaaaatcaagtttttcactctcttaatcttatcattagctttgtattagccttt 8995079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 159 - 255
Target Start/End: Complemental strand, 16021261 - 16021165
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattattagctttgtattagccttt 255  Q
    ||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  16021261 ctctataaatagagacttggatcatttgatttggacacagaaaaaaaatcaagtttttcactctcttaatcttattattagatttgtattagccttt 16021165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 159 - 255
Target Start/End: Original strand, 34463189 - 34463285
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattattagctttgtattagccttt 255  Q
    |||||||||||||||||||||| |||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||||||||    
T  34463189 ctctataaatagagacttggattatttgatttggacacagaaaaaaaatcaagtttttcactctcttaatcttattattagctttgtattagccttt 34463285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 159 - 255
Target Start/End: Original strand, 55549703 - 55549799
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattattagctttgtattagccttt 255  Q
    |||||||||||||||||||||| |||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  55549703 ctctataaatagagacttggataatttgatttggacacagaaaaaaaatcaagtttttcactctcttaatcttattattagctttgtattaaccttt 55549799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 159 - 255
Target Start/End: Original strand, 3529908 - 3530005
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnn-tcaagtttttcactctcttaatcttattattagctttgtattagccttt 255  Q
    ||||||||||||||||||||||||||||||||||||||           ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  3529908 ctctataaatagagacttggatcatttgatttggacacagaaaaaaaaatcaagtttttcactctcttaatcttatcattagctttgtattagccttt 3530005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 159 - 250
Target Start/End: Original strand, 33077508 - 33077599
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattattagctttgtattag 250  Q
    ||||||||||| ||||||||||||||||||||||||||          |||| |||||||||||||||||||||||||||||||||||||||    
T  33077508 ctctataaataaagacttggatcatttgatttggacacagaaaaaaaatcaaatttttcactctcttaatcttattattagctttgtattag 33077599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 160 - 243
Target Start/End: Complemental strand, 38173960 - 38173877
Alignment:
Q  160 tctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattattagcttt 243  Q
    |||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||    
T  38173960 tctataaatagagacttggatcatttgatttggacacagaaaaaaaatcaagtttttcactctcttaatcttattattagcttt 38173877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 40721572 - 40721520
Alignment:
Q  14 agagaggaaatggataaaggaagacacatggcattatgtgattggctgcttgg 66  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40721572 agagaggaaatggataaaggaagacacatggcattatgtgattggctgcttgg 40721520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 159 - 255
Target Start/End: Original strand, 34198908 - 34199005
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnn-tcaagtttttcactctcttaatcttattattagctttgtattagccttt 255  Q
    |||||| |||||||||||||||||||||||||||||||           ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  34198908 ctctattaatagagacttggatcatttgatttggacacagaaaaaaaaatcaagtttttcactctcttaatcttatcattagctttgtattagccttt 34199005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 159 - 255
Target Start/End: Complemental strand, 13113952 - 13113857
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattattagctttgtattagccttt 255  Q
    ||||||||||||||||||||||||||||||||||||||          |||||| ||||||||||||||| ||||||||||||||||||||| ||||    
T  13113952 ctctataaatagagacttggatcatttgatttggacac-agaaaaaaatcaagtatttcactctcttaatattattattagctttgtattagtcttt 13113857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 159 - 255
Target Start/End: Complemental strand, 40721431 - 40721336
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattattagctttgtattagccttt 255  Q
    ||||||||||||| |||| |||||||||||||||||||          ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  40721431 ctctataaatagatactttgatcatttgatttggacacaaaaaaaaa-tcaagtttttcactctcttaatcttatcattagctttgtattagccttt 40721336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 14 - 66
Target Start/End: Original strand, 3529764 - 3529816
Alignment:
Q  14 agagaggaaatggataaaggaagacacatggcattatgtgattggctgcttgg 66  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  3529764 agagaggaaatggataaagcaagacacatggcattatgtgattggctgcttgg 3529816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 8995321 - 8995269
Alignment:
Q  14 agagaggaaatggataaaggaagacacatggcattatgtgattggctgcttgg 66  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  8995321 agagaggaaatggataaagcaagacacatggcattatgtgattggctgcttgg 8995269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 162 - 251
Target Start/End: Complemental strand, 52773309 - 52773219
Alignment:
Q  162 tataaatagagacttggatcatttgatttggacacnnnnnnnnnn-tcaagtttttcactctcttaatcttattattagctttgtattagc 251  Q
    |||||||||||||||| ||||||||||||||||||           |||||||||||||||||||||||||||||||||||||||||||||    
T  52773309 tataaatagagacttgaatcatttgatttggacacagaaaaaaaaatcaagtttttcactctcttaatcttattattagctttgtattagc 52773219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 159 - 248
Target Start/End: Complemental strand, 56054669 - 56054581
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattattagctttgtatt 248  Q
    ||||||||||||||||||||||||||||||||||||||           |||||||||||||||||||||||||||||||||||| ||||    
T  56054669 ctctataaatagagacttggatcatttgatttggacacagaaaaaaac-caagtttttcactctcttaatcttattattagctttctatt 56054581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 159 - 250
Target Start/End: Complemental strand, 28901538 - 28901445
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnnt--caagtttttcactctcttaatcttattattagctttgtattag 250  Q
    ||||||||||||||||||||||||||||||||||||||             |||||||||||||||||||||||||||||||||||| ||||||    
T  28901538 ctctataaatagagacttggatcatttgatttggacacagaaaaaaaaaaccaagtttttcactctcttaatcttattattagctttctattag 28901445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 66
Target Start/End: Original strand, 34198762 - 34198814
Alignment:
Q  14 agagaggaaatggataaaggaagacacatggcattatgtgattggctgcttgg 66  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  34198762 agagaggaaatggataaaggaagacagatgtcattatgtgattggctgcttgg 34198814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 61
Target Start/End: Original strand, 34463046 - 34463094
Alignment:
Q  14 agagaggaaatggataaaggaa-gacacatggcattatgtgattggctg 61  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  34463046 agagaggaaatggataaaggaaagacacatggcattatgtgattggctg 34463094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 208 - 251
Target Start/End: Original strand, 23539371 - 23539414
Alignment:
Q  208 caagtttttcactctcttaatcttattattagctttgtattagc 251  Q
    |||||||||||||||||||||||||||||||||||| |||||||    
T  23539371 caagtttttcactctcttaatcttattattagctttctattagc 23539414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 159 - 240
Target Start/End: Complemental strand, 27864324 - 27864243
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattattagc 240  Q
    ||||| ||||||| ||||||||||||||||||||||||          |||| |||||||||||||||||||||||||||||    
T  27864324 ctctacaaatagaaacttggatcatttgatttggacacacaaaaaaaatcaaatttttcactctcttaatcttattattagc 27864243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 159 - 240
Target Start/End: Complemental strand, 35809810 - 35809729
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattattagc 240  Q
    ||||| ||||||| ||||||||||||||||||||||||          |||| |||||||||||||||||||||||||||||    
T  35809810 ctctacaaatagaaacttggatcatttgatttggacacagaaaaaaaatcaaatttttcactctcttaatcttattattagc 35809729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 159 - 251
Target Start/End: Original strand, 48506245 - 48506338
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac-nnnnnnnnnntcaagtttttcactctcttaatcttattattagctttgtattagc 251  Q
    ||||||||||||||||||||||||||||||||||||||            ||||||||||||||||||||| ||||||||| |||| |||||||    
T  48506245 ctctataaatagagacttggatcatttgatttggacacagaaaaaaaaaccaagtttttcactctcttaatattattattatctttctattagc 48506338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 159 - 250
Target Start/End: Original strand, 31336182 - 31336276
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac---nnnnnnnnnntcaagtttttcactctcttaatcttattattagctttgtattag 250  Q
    ||||||||||||||||||||||||||||||||||||||              ||||||||||||||||||||||||| |||||||||| ||||||    
T  31336182 ctctataaatagagacttggatcatttgatttggacacagaaaaaaaaaaaccaagtttttcactctcttaatcttagtattagctttctattag 31336276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 159 - 251
Target Start/End: Original strand, 40596414 - 40596506
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattattagctttgtattagc 251  Q
    |||||||||||||||||||| |||||||||||||||||           ||||||||||||| |||| |||||||||||| |||| |||||||    
T  40596414 ctctataaatagagacttggttcatttgatttggacacaggaaaaaaaccaagtttttcactatcttcatcttattattatctttctattagc 40596506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 196
Target Start/End: Original strand, 3614899 - 3614936
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac 196  Q
    ||||||||||||||||||||||||||||||||||||||    
T  3614899 ctctataaatagagacttggatcatttgatttggacac 3614936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 196
Target Start/End: Original strand, 16171542 - 16171579
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac 196  Q
    ||||||||||||||||||||||||||||||||||||||    
T  16171542 ctctataaatagagacttggatcatttgatttggacac 16171579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 196
Target Start/End: Original strand, 21654502 - 21654539
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac 196  Q
    ||||||||||||||||||||||||||||||||||||||    
T  21654502 ctctataaatagagacttggatcatttgatttggacac 21654539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 196
Target Start/End: Original strand, 31848453 - 31848490
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac 196  Q
    ||||||||||||||||||||||||||||||||||||||    
T  31848453 ctctataaatagagacttggatcatttgatttggacac 31848490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 159 - 237
Target Start/End: Complemental strand, 19273334 - 19273256
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattatt 237  Q
    ||||| ||||||| ||||||||||||||||||||||||          |||| ||||||||||||||||||||||||||    
T  19273334 ctctacaaatagaaacttggatcatttgatttggacacagaataaaaatcaaatttttcactctcttaatcttattatt 19273256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 251
Target Start/End: Complemental strand, 19409902 - 19409809
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnn-tcaagtttttcactctcttaatcttattattagctttgtattagc 251  Q
    ||||| |||||||||||||| |||||||||||||||||           |||||||||||||| ||||||||||||||||| |||| |||||||    
T  19409902 ctctagaaatagagacttggttcatttgatttggacacaaaaaaaaaaatcaagtttttcactatcttaatcttattattatctttctattagc 19409809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 243
Target Start/End: Complemental strand, 28447646 - 28447561
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac-nnnnnnnnnntcaagtttttcactctcttaatcttattattagcttt 243  Q
    ||||||||||||||||||| ||||||||||||||||||            |||||||||||||||||||||||| |||||||||||    
T  28447646 ctctataaatagagacttgaatcatttgatttggacacagaaaaaaacaccaagtttttcactctcttaatctttttattagcttt 28447561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 159 - 235
Target Start/End: Complemental strand, 33607427 - 33607351
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttatta 235  Q
    |||||||||||||||||| |||||||||||||||||||           ||||||||||||| ||||||||||||||    
T  33607427 ctctataaatagagactttgatcatttgatttggacacagaaaaaaaaacaagtttttcactatcttaatcttatta 33607351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 196
Target Start/End: Original strand, 2211996 - 2212033
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac 196  Q
    |||||||||||||||||||| |||||||||||||||||    
T  2211996 ctctataaatagagacttggttcatttgatttggacac 2212033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 196
Target Start/End: Original strand, 17329554 - 17329591
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac 196  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  17329554 ctctacaaatagagacttggatcatttgatttggacac 17329591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 196
Target Start/End: Original strand, 23389622 - 23389659
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac 196  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  23389622 ctctacaaatagagacttggatcatttgatttggacac 23389659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 196
Target Start/End: Original strand, 45081128 - 45081165
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac 196  Q
    |||||||||||||||||| |||||||||||||||||||    
T  45081128 ctctataaatagagactttgatcatttgatttggacac 45081165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 196
Target Start/End: Original strand, 46914190 - 46914227
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac 196  Q
    |||||||||||||||||||| |||||||||||||||||    
T  46914190 ctctataaatagagacttggttcatttgatttggacac 46914227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 207 - 244
Target Start/End: Complemental strand, 52773167 - 52773130
Alignment:
Q  207 tcaagtttttcactctcttaatcttattattagctttg 244  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  52773167 tcaagtttttcactctcttaatcttattattagatttg 52773130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 196
Target Start/End: Original strand, 53181132 - 53181169
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac 196  Q
    |||||||||||||||||| |||||||||||||||||||    
T  53181132 ctctataaatagagactttgatcatttgatttggacac 53181169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 196
Target Start/End: Original strand, 55598 - 55634
Alignment:
Q  160 tctataaatagagacttggatcatttgatttggacac 196  Q
    ||||||||||||||||||| |||||||||||||||||    
T  55598 tctataaatagagacttggttcatttgatttggacac 55634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 208 - 240
Target Start/End: Original strand, 53347389 - 53347421
Alignment:
Q  208 caagtttttcactctcttaatcttattattagc 240  Q
    |||||||||||||||||||||||||||||||||    
T  53347389 caagtttttcactctcttaatcttattattagc 53347421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 196
Target Start/End: Original strand, 55408218 - 55408254
Alignment:
Q  160 tctataaatagagacttggatcatttgatttggacac 196  Q
    ||||||||||||||||||| |||||||||||||||||    
T  55408218 tctataaatagagacttggttcatttgatttggacac 55408254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 159 - 251
Target Start/End: Complemental strand, 36658862 - 36658769
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac-nnnnnnnnnntcaagtttttcactctcttaatcttattattagctttgtattagc 251  Q
    ||||||||||||||| |||| |||||||||||||||||           |||||||||||||| |||| |||||||||||| |||| |||||||    
T  36658862 ctctataaatagagatttggttcatttgatttggacacagaaaaaaaaatcaagtttttcactatcttcatcttattattatctttctattagc 36658769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 165 - 196
Target Start/End: Original strand, 53347344 - 53347375
Alignment:
Q  165 aaatagagacttggatcatttgatttggacac 196  Q
    ||||||||||||||||||||||||||||||||    
T  53347344 aaatagagacttggatcatttgatttggacac 53347375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 193
Target Start/End: Complemental strand, 12159163 - 12159129
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttgga 193  Q
    |||||||||||||||||||| ||||||||||||||    
T  12159163 ctctataaatagagacttggttcatttgatttgga 12159129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 240
Target Start/End: Original strand, 13093816 - 13093896
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattattagc 240  Q
    ||||| ||||||| | ||||||||||||||||||||||          |||| |||||||||||||||||||||||||||||    
T  13093816 ctctacaaatagaaatttggatcatttgatttggacacagaaaaaaa-tcaaatttttcactctcttaatcttattattagc 13093896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 196
Target Start/End: Original strand, 18469011 - 18469041
Alignment:
Q  166 aatagagacttggatcatttgatttggacac 196  Q
    |||||||||||||||||||||||||||||||    
T  18469011 aatagagacttggatcatttgatttggacac 18469041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 196
Target Start/End: Original strand, 48403559 - 48403593
Alignment:
Q  162 tataaatagagacttggatcatttgatttggacac 196  Q
    |||||||||||||||| ||||||||||||||||||    
T  48403559 tataaatagagacttgaatcatttgatttggacac 48403593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 159 - 196
Target Start/End: Complemental strand, 7401600 - 7401563
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac 196  Q
    |||||||||| ||||||||| |||||||||||||||||    
T  7401600 ctctataaattgagacttggttcatttgatttggacac 7401563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 159 - 196
Target Start/End: Original strand, 23539321 - 23539358
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac 196  Q
    |||||||||||||||||||||| |||||||||| ||||    
T  23539321 ctctataaatagagacttggattatttgatttgaacac 23539358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 160 - 193
Target Start/End: Complemental strand, 33527115 - 33527082
Alignment:
Q  160 tctataaatagagacttggatcatttgatttgga 193  Q
    ||||||||||||||||||| ||||||||||||||    
T  33527115 tctataaatagagacttggttcatttgatttgga 33527082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 159 - 196
Target Start/End: Original strand, 34434196 - 34434233
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac 196  Q
    ||||| |||||||||||| |||||||||||||||||||    
T  34434196 ctctacaaatagagactttgatcatttgatttggacac 34434233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 160 - 193
Target Start/End: Original strand, 39048704 - 39048737
Alignment:
Q  160 tctataaatagagacttggatcatttgatttgga 193  Q
    ||||||||||||||||||| ||||||||||||||    
T  39048704 tctataaatagagacttggttcatttgatttgga 39048737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 163 - 196
Target Start/End: Original strand, 47749732 - 47749765
Alignment:
Q  163 ataaatagagacttggatcatttgatttggacac 196  Q
    |||||||||||||||| |||||||||||||||||    
T  47749732 ataaatagagacttggttcatttgatttggacac 47749765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 195
Target Start/End: Complemental strand, 10090174 - 10090138
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggaca 195  Q
    ||||| |||||||||||||| ||||||||||||||||    
T  10090174 ctctacaaatagagacttggttcatttgatttggaca 10090138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 212 - 240
Target Start/End: Original strand, 17329610 - 17329638
Alignment:
Q  212 tttttcactctcttaatcttattattagc 240  Q
    |||||||||||||||||||||||||||||    
T  17329610 tttttcactctcttaatcttattattagc 17329638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 212 - 240
Target Start/End: Original strand, 18469059 - 18469087
Alignment:
Q  212 tttttcactctcttaatcttattattagc 240  Q
    |||||||||||||||||||||||||||||    
T  18469059 tttttcactctcttaatcttattattagc 18469087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 196
Target Start/End: Original strand, 21047596 - 21047632
Alignment:
Q  160 tctataaatagagacttggatcatttgatttggacac 196  Q
    |||||||||||||| |||| |||||||||||||||||    
T  21047596 tctataaatagagatttggttcatttgatttggacac 21047632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 196
Target Start/End: Original strand, 39113432 - 39113468
Alignment:
Q  160 tctataaatagagacttggatcatttgatttggacac 196  Q
    |||||||||| |||||||| |||||||||||||||||    
T  39113432 tctataaatatagacttggttcatttgatttggacac 39113468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 60; Significance: 1e-25; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 159 - 255
Target Start/End: Complemental strand, 42860344 - 42860247
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnn-tcaagtttttcactctcttaatcttattattagctttgtattagccttt 255  Q
    ||||||||||||||||||||||||||||||||||||||           |||||||||||||||||||||||||||||||||||||||||||||||||    
T  42860344 ctctataaatagagacttggatcatttgatttggacacagaaaaaaaaatcaagtttttcactctcttaatcttattattagctttgtattagccttt 42860247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 159 - 251
Target Start/End: Complemental strand, 15057003 - 15056911
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattattagctttgtattagc 251  Q
    ||||||||||||||||||| ||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||||    
T  15057003 ctctataaatagagacttgaatcatttgatttggacacagaaaaaaaatcaagtttttcactctcttaatcttattattagctttgtattagc 15056911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 159 - 255
Target Start/End: Original strand, 45100674 - 45100771
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnn-tcaagtttttcactctcttaatcttattattagctttgtattagccttt 255  Q
    ||||||||||||||||||||||||||||||||||||||           |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  45100674 ctctataaatagagacttggatcatttgatttggacacaggaaaaaaaatcaagtttttcactctcttaatcttattattagctttgtattagtcttt 45100771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 159 - 255
Target Start/End: Complemental strand, 35932277 - 35932181
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattattagctttgtattagccttt 255  Q
    ||||||||||||||||||  ||||||||||||||||||          | |||||||||||||||||||||||||||||||||||||||||||||||    
T  35932277 ctctataaatagagacttaaatcatttgatttggacacagaaaaaaaattaagtttttcactctcttaatcttattattagctttgtattagccttt 35932181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 159 - 251
Target Start/End: Original strand, 12272111 - 12272203
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattattagctttgtattagc 251  Q
    ||||||||||||||||||||||||||||||||||||||           ||||||||||||||||||||| ||||||||| |||| |||||||    
T  12272111 ctctataaatagagacttggatcatttgatttggacacagaaaaaaaaccaagtttttcactctcttaatattattattatctttctattagc 12272203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 159 - 240
Target Start/End: Complemental strand, 40284025 - 40283944
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattattagc 240  Q
    ||||| ||||||| ||||||||||||||||||||||||          |||| |||||||||||||||||||||||||||||    
T  40284025 ctctacaaatagaaacttggatcatttgatttggacacagaataaaaatcaaatttttcactctcttaatcttattattagc 40283944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 159 - 251
Target Start/End: Original strand, 26631805 - 26631897
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattattagctttgtattagc 251  Q
    |||||||||||||||||||| |||||||||||||||||           ||||||||||||| |||| |||||||||||| |||| |||||||    
T  26631805 ctctataaatagagacttggttcatttgatttggacacaggaaaaaaaccaagtttttcactatcttcatcttattattatctttctattagc 26631897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 159 - 251
Target Start/End: Original strand, 30470471 - 30470563
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattattagctttgtattagc 251  Q
    |||||||||||||||||||| |||||||||||||||||           ||||||||||||| |||| |||||||||||| |||| |||||||    
T  30470471 ctctataaatagagacttggttcatttgatttggacacaggaaaaaaaccaagtttttcactatcttcatcttattattatctttctattagc 30470563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 196
Target Start/End: Complemental strand, 13817471 - 13817434
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac 196  Q
    ||||||||||||||||||||||||||||||||||||||    
T  13817471 ctctataaatagagacttggatcatttgatttggacac 13817434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 196
Target Start/End: Original strand, 31129102 - 31129139
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac 196  Q
    ||||||||||||||||||||||||||||||||||||||    
T  31129102 ctctataaatagagacttggatcatttgatttggacac 31129139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 196
Target Start/End: Complemental strand, 42861117 - 42861080
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac 196  Q
    ||||||||||||||||||||||||||||||||||||||    
T  42861117 ctctataaatagagacttggatcatttgatttggacac 42861080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 159 - 237
Target Start/End: Complemental strand, 26245047 - 26244969
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattatt 237  Q
    ||||| ||||||| ||||||||||||||||||||||||          |||| ||||||||||||||||||||||||||    
T  26245047 ctctacaaatagaaacttggatcatttgatttggacacagaataaaaatcaaatttttcactctcttaatcttattatt 26244969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 240
Target Start/End: Original strand, 1633069 - 1633150
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattattagc 240  Q
    |||||||||||||||||| |||||||||||||||||||          |||  |||||||||||||||||||||| ||||||    
T  1633069 ctctataaatagagactttgatcatttgatttggacacagaaaaaaaatcatatttttcactctcttaatcttataattagc 1633150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 240
Target Start/End: Complemental strand, 29732101 - 29732020
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattattagc 240  Q
    ||||| |||||||||||| |||||||||||||||||||          |||  |||||||||||||||||||||||||||||    
T  29732101 ctctacaaatagagactttgatcatttgatttggacacagaaaaaaaatcatatttttcactctcttaatcttattattagc 29732020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 162 - 196
Target Start/End: Complemental strand, 5214214 - 5214180
Alignment:
Q  162 tataaatagagacttggatcatttgatttggacac 196  Q
    |||||||||||||||||||||||||||||||||||    
T  5214214 tataaatagagacttggatcatttgatttggacac 5214180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 163 - 196
Target Start/End: Original strand, 1954904 - 1954937
Alignment:
Q  163 ataaatagagacttggatcatttgatttggacac 196  Q
    ||||||||||||||||||||||||||||||||||    
T  1954904 ataaatagagacttggatcatttgatttggacac 1954937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 196
Target Start/End: Original strand, 4625177 - 4625214
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac 196  Q
    |||||||||||||||||||| |||||||||||||||||    
T  4625177 ctctataaatagagacttggttcatttgatttggacac 4625214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 196
Target Start/End: Complemental strand, 5736442 - 5736405
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac 196  Q
    |||||||||||||||||||| |||||||||||||||||    
T  5736442 ctctataaatagagacttggttcatttgatttggacac 5736405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 196
Target Start/End: Original strand, 8449686 - 8449723
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac 196  Q
    |||||||||||||||||||| |||||||||||||||||    
T  8449686 ctctataaatagagacttggttcatttgatttggacac 8449723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 196
Target Start/End: Original strand, 13783838 - 13783875
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac 196  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  13783838 ctctacaaatagagacttggatcatttgatttggacac 13783875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 196
Target Start/End: Original strand, 18028996 - 18029033
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac 196  Q
    |||||||||||||||||||| |||||||||||||||||    
T  18028996 ctctataaatagagacttggttcatttgatttggacac 18029033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 196
Target Start/End: Original strand, 26748611 - 26748648
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac 196  Q
    |||||||||||||||||||| |||||||||||||||||    
T  26748611 ctctataaatagagacttggttcatttgatttggacac 26748648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 196
Target Start/End: Original strand, 34954985 - 34955022
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac 196  Q
    |||||||||||||||||||| |||||||||||||||||    
T  34954985 ctctataaatagagacttggttcatttgatttggacac 34955022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 196
Target Start/End: Original strand, 7511416 - 7511450
Alignment:
Q  162 tataaatagagacttggatcatttgatttggacac 196  Q
    |||||||||||||||| ||||||||||||||||||    
T  7511416 tataaatagagacttgaatcatttgatttggacac 7511450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 159 - 196
Target Start/End: Complemental strand, 23550162 - 23550125
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac 196  Q
    ||||| ||||||||||||| ||||||||||||||||||    
T  23550162 ctctacaaatagagacttgaatcatttgatttggacac 23550125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 159 - 196
Target Start/End: Complemental strand, 35101816 - 35101779
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac 196  Q
    |||||||||||||||||||  |||||||||||||||||    
T  35101816 ctctataaatagagacttgattcatttgatttggacac 35101779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 159 - 196
Target Start/End: Complemental strand, 36912988 - 36912951
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac 196  Q
    |||||||||||||||||||| |||||| ||||||||||    
T  36912988 ctctataaatagagacttggttcatttaatttggacac 36912951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 195
Target Start/End: Complemental strand, 13497691 - 13497655
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggaca 195  Q
    ||||||||||| ||||||||||||||| |||||||||    
T  13497691 ctctataaataaagacttggatcatttaatttggaca 13497655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 251
Target Start/End: Complemental strand, 17744949 - 17744905
Alignment:
Q  207 tcaagtttttcactctcttaatcttattattagctttgtattagc 251  Q
    |||||||||||| | ||||||||||||||||| |||| |||||||    
T  17744949 tcaagtttttcaatatcttaatcttattattatctttctattagc 17744905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 212 - 240
Target Start/End: Complemental strand, 23550107 - 23550079
Alignment:
Q  212 tttttcactctcttaatcttattattagc 240  Q
    |||||||||||||||||||||||||||||    
T  23550107 tttttcactctcttaatcttattattagc 23550079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 196
Target Start/End: Original strand, 30289415 - 30289451
Alignment:
Q  160 tctataaatagagacttggatcatttgatttggacac 196  Q
    ||||||||||| ||||||| |||||||||||||||||    
T  30289415 tctataaatagtgacttggttcatttgatttggacac 30289451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 191
Target Start/End: Original strand, 38204920 - 38204952
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttg 191  Q
    ||||| |||||||||||||||||||||||||||    
T  38204920 ctctacaaatagagacttggatcatttgatttg 38204952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 196
Target Start/End: Original strand, 39810709 - 39810745
Alignment:
Q  160 tctataaatagagacttggatcatttgatttggacac 196  Q
    |||||| |||||||||||| |||||||||||||||||    
T  39810709 tctatagatagagacttggttcatttgatttggacac 39810745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1905 (Bit Score: 57; Significance: 7e-24; HSPs: 2)
Name: scaffold1905
Description:

Target: scaffold1905; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 159 - 249
Target Start/End: Complemental strand, 349 - 259
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattattagctttgtatta 249  Q
    |||||||||||||||||||||||||||||||||||||           |||||||||||||||||||||||||||||||||||||||||||    
T  349 ctctataaatagagacttggatcatttgatttggacaaagaaaaaaaatcaagtttttcactctcttaatcttattattagctttgtatta 259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1905; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 159 - 240
Target Start/End: Original strand, 1085 - 1166
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattattagc 240  Q
    ||||| ||||||||||||||||||||||||||||||||          |||| ||||||||||||||||| |||||||||||    
T  1085 ctctacaaatagagacttggatcatttgatttggacacagaaaaaaaatcaaatttttcactctcttaattttattattagc 1166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 56; Significance: 3e-23; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 159 - 255
Target Start/End: Original strand, 13592565 - 13592662
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnn-tcaagtttttcactctcttaatcttattattagctttgtattagccttt 255  Q
    ||||||||||||||||||||||||||||||||||||||           ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  13592565 ctctataaatagagacttggatcatttgatttggacacagaaaaaaaaatcaagtttttcactctcttaatcatattattagctttgtattagccttt 13592662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 159 - 255
Target Start/End: Complemental strand, 19241728 - 19241633
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattattagctttgtattagccttt 255  Q
    |||||||||||||||||||||||||||||||||||||           ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  19241728 ctctataaatagagacttggatcatttgatttggaca-tagaaaaaaatcaagtttttcactctcttaatcttatcattagctttgtattagccttt 19241633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 159 - 255
Target Start/End: Original strand, 23648713 - 23648809
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattattagctttgtattagccttt 255  Q
    |||||||||||||||||| |||||||||||||||||||          |||||||||| || |||||||||||||||||||||||||||||||||||    
T  23648713 ctctataaatagagacttagatcatttgatttggacacagaaaaaaaatcaagttttttaccctcttaatcttattattagctttgtattagccttt 23648809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 159 - 255
Target Start/End: Complemental strand, 23809859 - 23809763
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattattagctttgtattagccttt 255  Q
    |||||||||||||||||| |||||||||||||||||||          |||||||||| || |||||||||||||||||||||||||||||||||||    
T  23809859 ctctataaatagagacttagatcatttgatttggacacagaaaaaaaatcaagttttttaccctcttaatcttattattagctttgtattagccttt 23809763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 159 - 251
Target Start/End: Original strand, 31008053 - 31008145
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattattagctttgtattagc 251  Q
    ||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||| |||||||||||| |||||||    
T  31008053 ctctataaatagagacttggatcatttgatttggacacagaaaaaaaatcaagtttttcactctcttaatctcattattagctttatattagc 31008145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 159 - 255
Target Start/End: Complemental strand, 42318305 - 42318209
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattattagctttgtattagccttt 255  Q
    ||||||||||||||||||  ||||||||||||||||||          |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  42318305 ctctataaatagagacttaaatcatttgatttggacacagaaaaaaaatcaaatttttcactctcttaatcttattattagctttgtattagccttt 42318209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 19241875 - 19241823
Alignment:
Q  14 agagaggaaatggataaaggaagacacatggcattatgtgattggctgcttgg 66  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19241875 agagaggaaatggataaaggaagacacatggcattatgtgattggctgcttgg 19241823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 159 - 243
Target Start/End: Complemental strand, 4938511 - 4938427
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattattagcttt 243  Q
    ||||||||||| ||||||||||||||||||||||||||           ||||||||||||||||||||||||||||||||||||    
T  4938511 ctctataaataaagacttggatcatttgatttggacacagaaaaaaaaccaagtttttcactctcttaatcttattattagcttt 4938427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 207 - 255
Target Start/End: Original strand, 29616190 - 29616238
Alignment:
Q  207 tcaagtttttcactctcttaatcttattattagctttgtattagccttt 255  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  29616190 tcaagtttttcaccctcttaatcttattattagctttgtattagccttt 29616238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 160 - 251
Target Start/End: Original strand, 34529066 - 34529157
Alignment:
Q  160 tctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattattagctttgtattagc 251  Q
    ||||||||||||||||||| |||||||||||||||||          |||||||||||||| |||||||||| |||||| |||| |||||||    
T  34529066 tctataaatagagacttggttcatttgatttggacacaaaaaaaaaatcaagtttttcactatcttaatcttgttattatctttctattagc 34529157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 161 - 243
Target Start/End: Original strand, 42804440 - 42804521
Alignment:
Q  161 ctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattattagcttt 243  Q
    ||||||||||||||||| ||||||||||||||||||          |||||||||||||||||||||||||||| ||||||||    
T  42804440 ctataaatagagacttgaatcatttgatttggacacagaaaaaaa-tcaagtttttcactctcttaatcttattgttagcttt 42804521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 159 - 243
Target Start/End: Original strand, 27405837 - 27405921
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattattagcttt 243  Q
    ||||||||||||||||||  ||||||||||||||||||           ||| ||||||||||||||||||||||||||||||||    
T  27405837 ctctataaatagagacttaaatcatttgatttggacacagaaaaaaaaccaaatttttcactctcttaatcttattattagcttt 27405921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 196
Target Start/End: Complemental strand, 3455248 - 3455211
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac 196  Q
    ||||||||||||||||||||||||||||||||||||||    
T  3455248 ctctataaatagagacttggatcatttgatttggacac 3455211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 196
Target Start/End: Complemental strand, 4580429 - 4580392
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac 196  Q
    ||||||||||||||||||||||||||||||||||||||    
T  4580429 ctctataaatagagacttggatcatttgatttggacac 4580392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 196
Target Start/End: Complemental strand, 27946041 - 27946004
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac 196  Q
    ||||||||||||||||||||||||||||||||||||||    
T  27946041 ctctataaatagagacttggatcatttgatttggacac 27946004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 251
Target Start/End: Original strand, 30644688 - 30644782
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnnt--caagtttttcactctcttaatcttattattagctttgtattagc 251  Q
    |||||||||| |||||||||||||||||||||||||||             ||||||||||||||| |||||||||||||||||||| |||||||    
T  30644688 ctctataaattgagacttggatcatttgatttggacacagaaaaaaaaaaccaagtttttcactcttttaatcttattattagctttctattagc 30644782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 196
Target Start/End: Original strand, 31011730 - 31011767
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac 196  Q
    ||||||||||||||||||||||||||||||||||||||    
T  31011730 ctctataaatagagacttggatcatttgatttggacac 31011767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 196
Target Start/End: Original strand, 32973038 - 32973075
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac 196  Q
    ||||||||||||||||||||||||||||||||||||||    
T  32973038 ctctataaatagagacttggatcatttgatttggacac 32973075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 196
Target Start/End: Original strand, 36572052 - 36572089
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac 196  Q
    ||||||||||||||||||||||||||||||||||||||    
T  36572052 ctctataaatagagacttggatcatttgatttggacac 36572089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 196
Target Start/End: Complemental strand, 40892212 - 40892175
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac 196  Q
    ||||||||||||||||||||||||||||||||||||||    
T  40892212 ctctataaatagagacttggatcatttgatttggacac 40892175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 159 - 240
Target Start/End: Original strand, 4219068 - 4219150
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac-nnnnnnnnnntcaagtttttcactctcttaatcttattattagc 240  Q
    ||||| ||||||||||||||||||||||||||||||||           |||| |||||||||||||||||||||||||||||    
T  4219068 ctctacaaatagagacttggatcatttgatttggacacagaaaaaaaaatcaaatttttcactctcttaatcttattattagc 4219150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 240
Target Start/End: Original strand, 25670460 - 25670540
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattattagc 240  Q
    ||||||||||||||||||||||||||| ||||||||||          | || |||||||||||||||||||||||||||||    
T  25670460 ctctataaatagagacttggatcatttcatttggacacataaaaaaaat-aaatttttcactctcttaatcttattattagc 25670540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 159 - 193
Target Start/End: Complemental strand, 7651393 - 7651359
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttgga 193  Q
    |||||||||||||||||||||||||||||||||||    
T  7651393 ctctataaatagagacttggatcatttgatttgga 7651359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 159 - 251
Target Start/End: Original strand, 41152527 - 41152619
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattattagctttgtattagc 251  Q
    |||||||||||||||||||| |||||||||||||||||           ||||||||||||| |||| |||||||||||| | || |||||||    
T  41152527 ctctataaatagagacttggttcatttgatttggacacagaaaaaaaaacaagtttttcactatcttcatcttattattatccttctattagc 41152619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 196
Target Start/End: Complemental strand, 9958104 - 9958067
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac 196  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  9958104 ctctataaatagagacttggatcatttgatttgaacac 9958067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 207 - 244
Target Start/End: Original strand, 13592710 - 13592747
Alignment:
Q  207 tcaagtttttcactctcttaatcttattattagctttg 244  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  13592710 tcaagtttttcactctcttaatcttattattagatttg 13592747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 196
Target Start/End: Complemental strand, 25033608 - 25033571
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac 196  Q
    |||||||||||||||||||| |||||||||||||||||    
T  25033608 ctctataaatagagacttggttcatttgatttggacac 25033571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 196
Target Start/End: Complemental strand, 25653244 - 25653207
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac 196  Q
    |||||||||||||||||||| |||||||||||||||||    
T  25653244 ctctataaatagagacttggttcatttgatttggacac 25653207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 196
Target Start/End: Original strand, 29616135 - 29616172
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac 196  Q
    |||||||||||||||||| |||||||||||||||||||    
T  29616135 ctctataaatagagactttgatcatttgatttggacac 29616172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 196
Target Start/End: Original strand, 32363108 - 32363145
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac 196  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  32363108 ctctacaaatagagacttggatcatttgatttggacac 32363145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 195
Target Start/End: Complemental strand, 7827533 - 7827497
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggaca 195  Q
    |||||||||||||||||||| ||||||||||||||||    
T  7827533 ctctataaatagagacttggttcatttgatttggaca 7827497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 196
Target Start/End: Complemental strand, 14279254 - 14279218
Alignment:
Q  160 tctataaatagagacttggatcatttgatttggacac 196  Q
    ||||||||||||||||||| |||||||||||||||||    
T  14279254 tctataaatagagacttggttcatttgatttggacac 14279218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 159 - 240
Target Start/End: Complemental strand, 23089953 - 23089872
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattattagc 240  Q
    ||||| ||||||||||||||||||||| ||||||||||           |||  ||||||||||||||||||||||||||||    
T  23089953 ctctacaaatagagacttggatcatttaatttggacacagaaaaaaaaccaaaattttcactctcttaatcttattattagc 23089872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 159 - 196
Target Start/End: Original strand, 8176020 - 8176057
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac 196  Q
    |||||||||||||||||||| |||||| ||||||||||    
T  8176020 ctctataaatagagacttggttcatttaatttggacac 8176057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 159 - 196
Target Start/End: Original strand, 13479243 - 13479280
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac 196  Q
    ||||| ||||||| ||||||||||||||||||||||||    
T  13479243 ctctacaaatagaaacttggatcatttgatttggacac 13479280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 207 - 240
Target Start/End: Original strand, 13479295 - 13479328
Alignment:
Q  207 tcaagtttttcactctcttaatcttattattagc 240  Q
    |||| |||||||||||||||||||||||||||||    
T  13479295 tcaaatttttcactctcttaatcttattattagc 13479328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 159 - 196
Target Start/End: Complemental strand, 21368674 - 21368637
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac 196  Q
    ||||||||||||| |||||| |||||||||||||||||    
T  21368674 ctctataaatagaaacttggttcatttgatttggacac 21368637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 196
Target Start/End: Complemental strand, 12913270 - 12913234
Alignment:
Q  160 tctataaatagagacttggatcatttgatttggacac 196  Q
    |||||||||| |||||||| |||||||||||||||||    
T  12913270 tctataaataaagacttggttcatttgatttggacac 12913234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 196
Target Start/End: Complemental strand, 15973005 - 15972969
Alignment:
Q  160 tctataaatagagacttggatcatttgatttggacac 196  Q
    ||||||||||||||||||  |||||||||||||||||    
T  15973005 tctataaatagagacttgattcatttgatttggacac 15972969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 196
Target Start/End: Original strand, 37882130 - 37882166
Alignment:
Q  160 tctataaatagagacttggatcatttgatttggacac 196  Q
    ||||||||||||||||||| | |||||||||||||||    
T  37882130 tctataaatagagacttggttaatttgatttggacac 37882166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 1e-22; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 159 - 255
Target Start/End: Complemental strand, 10886660 - 10886564
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattattagctttgtattagccttt 255  Q
    ||||||||||||||||||||||||||||||||||||||          | ||||||||||||||||||||||||||||||| |||| ||||||||||    
T  10886660 ctctataaatagagacttggatcatttgatttggacacagaaaaaaaattaagtttttcactctcttaatcttattattagttttgcattagccttt 10886564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 159 - 243
Target Start/End: Complemental strand, 12513447 - 12513363
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattattagcttt 243  Q
    |||||||||||||||||| |||||||||||||||||||           ||||||||||||||||||||||||||||||| ||||    
T  12513447 ctctataaatagagactttgatcatttgatttggacacagaaaaaaaaccaagtttttcactctcttaatcttattattaacttt 12513363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 159 - 251
Target Start/End: Complemental strand, 635102 - 635009
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac-nnnnnnnnnntcaagtttttcactctcttaatcttattattagctttgtattagc 251  Q
    ||||||||||||||||||||||||||||||||||||||           |||||||||||||| |||| |||||||||||| |||| |||||||    
T  635102 ctctataaatagagacttggatcatttgatttggacacagaaaaaaaaatcaagtttttcactatcttcatcttattattatctttctattagc 635009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 159 - 240
Target Start/End: Original strand, 26653807 - 26653888
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattattagc 240  Q
    ||||| ||||||| ||||||||||||||||||||||||          |||| |||||||||||||||||||||||||||||    
T  26653807 ctctacaaatagaaacttggatcatttgatttggacacagaaaaaaaatcaaatttttcactctcttaatcttattattagc 26653888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 159 - 240
Target Start/End: Original strand, 26759776 - 26759857
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattattagc 240  Q
    ||||| ||||||| ||||||||||||||||||||||||          |||| |||||||||||||||||||||||||||||    
T  26759776 ctctacaaatagaaacttggatcatttgatttggacacagaaaaaaaatcaaatttttcactctcttaatcttattattagc 26759857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 196
Target Start/End: Original strand, 6377131 - 6377168
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac 196  Q
    ||||||||||||||||||||||||||||||||||||||    
T  6377131 ctctataaatagagacttggatcatttgatttggacac 6377168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 251
Target Start/End: Complemental strand, 8222535 - 8222441
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnnt--caagtttttcactctcttaatcttattattagctttgtattagc 251  Q
    ||||||||||||| ||||||||||||||||||||||||             ||||||||||||||||||||||||||||||| |||| |||||||    
T  8222535 ctctataaatagatacttggatcatttgatttggacacagaaaaaaaaaaccaagtttttcactctcttaatcttattattaactttctattagc 8222441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 196
Target Start/End: Complemental strand, 8668856 - 8668819
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac 196  Q
    ||||||||||||||||||||||||||||||||||||||    
T  8668856 ctctataaatagagacttggatcatttgatttggacac 8668819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 196
Target Start/End: Original strand, 17957999 - 17958036
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac 196  Q
    ||||||||||||||||||||||||||||||||||||||    
T  17957999 ctctataaatagagacttggatcatttgatttggacac 17958036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 241
Target Start/End: Complemental strand, 30446687 - 30446602
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnn---tcaagtttttcactctcttaatcttattattagct 241  Q
    |||||||||||||||||||||||||||||||| |||||             |||||||||||||||||||||||||||||||||||    
T  30446687 ctctataaatagagacttggatcatttgattttgacacagaaaaaaaaaaatcaagtttttcactctcttaatcttattattagct 30446602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 196
Target Start/End: Complemental strand, 34841897 - 34841860
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac 196  Q
    ||||||||||||||||||||||||||||||||||||||    
T  34841897 ctctataaatagagacttggatcatttgatttggacac 34841860  T

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Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 243
Target Start/End: Complemental strand, 12502331 - 12502246
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac-nnnnnnnnnntcaagtttttcactctcttaatcttattattagcttt 243  Q
    ||||||||||||||||||| ||||||||||||||||||            ||||||||||||||||||||||||||||||| ||||    
T  12502331 ctctataaatagagacttgaatcatttgatttggacacagaaaaaaaaaccaagtttttcactctcttaatcttattattaacttt 12502246  T

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Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 251
Target Start/End: Complemental strand, 32360165 - 32360076
Alignment:
Q  162 tataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattattagctttgtattagc 251  Q
    ||||||||||||||||  |||||||||||||||||           ||||||||||||| ||||||||||||||||| |||| |||||||    
T  32360165 tataaatagagacttgattcatttgatttggacacagaaaaaaaaccaagtttttcactatcttaatcttattattatctttctattagc 32360076  T

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Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 196
Target Start/End: Complemental strand, 198247 - 198210
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac 196  Q
    |||||||||||||||||||| |||||||||||||||||    
T  198247 ctctataaatagagacttggttcatttgatttggacac 198210  T

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Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 196
Target Start/End: Complemental strand, 2503765 - 2503728
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac 196  Q
    |||||||||||||||||||| |||||||||||||||||    
T  2503765 ctctataaatagagacttggttcatttgatttggacac 2503728  T

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Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 196
Target Start/End: Complemental strand, 24348898 - 24348861
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac 196  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  24348898 ctctacaaatagagacttggatcatttgatttggacac 24348861  T

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Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 196
Target Start/End: Original strand, 29951725 - 29951762
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac 196  Q
    |||||||||||||||||| |||||||||||||||||||    
T  29951725 ctctataaatagagacttagatcatttgatttggacac 29951762  T

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Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 196
Target Start/End: Complemental strand, 34328820 - 34328783
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac 196  Q
    |||||||||||||||||||| |||||||||||||||||    
T  34328820 ctctataaatagagacttggttcatttgatttggacac 34328783  T

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Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 196
Target Start/End: Original strand, 6725324 - 6725360
Alignment:
Q  160 tctataaatagagacttggatcatttgatttggacac 196  Q
    ||||||||||||||||||| |||||||||||||||||    
T  6725324 tctataaatagagacttggttcatttgatttggacac 6725360  T

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Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 212 - 243
Target Start/End: Complemental strand, 34242774 - 34242743
Alignment:
Q  212 tttttcactctcttaatcttattattagcttt 243  Q
    ||||||||||||||||||||||||||||||||    
T  34242774 tttttcactctcttaatcttattattagcttt 34242743  T

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Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 196
Target Start/End: Complemental strand, 7541362 - 7541326
Alignment:
Q  160 tctataaatagagacttggatcatttgatttggacac 196  Q
    |||||||||||||| |||| |||||||||||||||||    
T  7541362 tctataaatagagatttggttcatttgatttggacac 7541326  T

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Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 212 - 240
Target Start/End: Complemental strand, 24348835 - 24348807
Alignment:
Q  212 tttttcactctcttaatcttattattagc 240  Q
    |||||||||||||||||||||||||||||    
T  24348835 tttttcactctcttaatcttattattagc 24348807  T

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Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 196
Target Start/End: Complemental strand, 34242827 - 34242791
Alignment:
Q  160 tctataaatagagacttggatcatttgatttggacac 196  Q
    |||| ||||||||| ||||||||||||||||||||||    
T  34242827 tctacaaatagagatttggatcatttgatttggacac 34242791  T

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Target: scaffold0021 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 196
Target Start/End: Original strand, 109868 - 109905
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac 196  Q
    ||||||||||||||||||||||||||||||||||||||    
T  109868 ctctataaatagagacttggatcatttgatttggacac 109905  T

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Target: scaffold0004 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 240
Target Start/End: Complemental strand, 106254 - 106173
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattattagc 240  Q
    ||||||||||||||||||||||||||||||||| ||||          |||  |||||||||||||||||||||| ||||||    
T  106254 ctctataaatagagacttggatcatttgatttgcacacagaaaaaaaatcatatttttcactctcttaatcttataattagc 106173  T

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Target: scaffold0758 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0758
Description:

Target: scaffold0758; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 196
Target Start/End: Original strand, 6370 - 6407
Alignment:
Q  159 ctctataaatagagacttggatcatttgatttggacac 196  Q
    |||||||||||||||||||| |||||||||||||||||    
T  6370 ctctataaatagagacttggttcatttgatttggacac 6407  T

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Target: scaffold0012 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 160 - 249
Target Start/End: Complemental strand, 124458 - 124369
Alignment:
Q  160 tctataaatagagacttggatcatttgatttggacacnnnnnnnnnntcaagtttttcactctcttaatcttattattagctttgtatta 249  Q
    ||||||||||||||||||| | |||||||||||||||           ||||||||| ||| ||||||||||||||||| |||| |||||    
T  124458 tctataaatagagacttggtttatttgatttggacaccgaaaaaaatccaagttttttactatcttaatcttattattatctttctatta 124369  T

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Target: scaffold1183 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1183
Description:

Target: scaffold1183; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 196
Target Start/End: Complemental strand, 64 - 28
Alignment:
Q  160 tctataaatagagacttggatcatttgatttggacac 196  Q
    |||||||||||| |||||| |||||||||||||||||    
T  64 tctataaatagatacttggttcatttgatttggacac 28  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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