View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11737A_low_124 (Length: 363)
Name: NF11737A_low_124
Description: NF11737A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11737A_low_124 |
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Alignment Details
Target: chr8 (Bit Score: 353; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 353; E-Value: 0
Query Start/End: Original strand, 1 - 357
Target Start/End: Complemental strand, 30138547 - 30138191
Alignment:
| Q |
1 |
tcaattgcatgggcttcaggtttaaccttagccattccaatcctcactttcatctctttccaccttaacagccaataccaaaccctaatcacagcagcat |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30138547 |
tcaattgcatgggcttcaggtttaaccttagccattccaatcctcactttcatctctttccaccttaacagccaataccaaaccctaatcacagcagcat |
30138448 |
T |
|
| Q |
101 |
ccacaggcattggagttttcttctgtcttccagcaggattcttcaaaacaaccttaatcttcattccctacattgctttcatagtcttagctagcacagt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30138447 |
ccacaggcattggagttttcttctgtcttccagcaggattcttcaaaacaaccttaatcttcattccctacattgctttcatagtcttagctagcacagt |
30138348 |
T |
|
| Q |
201 |
tgcaagttcatctcacactcaccatcttgctctcatgatttcttccttcaacaaatccaaaacaaacaaagtttcaagtttcttctctctttatgctact |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30138347 |
tgcaagttcatctcacactcaccatcttgctctcatgatttcttccttcaacaaatccaaaacaaacaaagtttcaagtttcttctctctttatgctact |
30138248 |
T |
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| Q |
301 |
tcttttggttgtttaggttcagccattatctcttctttcatttaccatattcttcga |
357 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
30138247 |
tcttttggttgtttaggttcagccattatctcttctttcatttaccatatgcttcga |
30138191 |
T |
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