View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11737A_low_167 (Length: 327)
Name: NF11737A_low_167
Description: NF11737A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11737A_low_167 |
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Alignment Details
Target: chr7 (Bit Score: 285; Significance: 1e-160; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 285; E-Value: 1e-160
Query Start/End: Original strand, 14 - 310
Target Start/End: Complemental strand, 47285960 - 47285664
Alignment:
| Q |
14 |
catcagaaaccaaatcagataaacggtttagtgtaatgtcaccggcttctagacctagactctaccattcatctgcaattgtgttaagagatggaagagt |
113 |
Q |
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| T |
47285960 |
catcagaaaccaaatcagataaacgatttagtgtaatgtcaccagcttctagacctagactctaccattcatctgcaattgtgttaagagatggaagagt |
47285861 |
T |
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| Q |
114 |
tttagtaggtggtagtaatccacatgtaaattacaattttaccggagttgaatttccaaccgatttaagcttagaggcattttctccgccctatttgtcg |
213 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47285860 |
tttagtaggtggtagtaatccacatgtaaattacaattttaccggagttgaatttccaaccgatttaagcttagaggcattttctccgccctatttgtcg |
47285761 |
T |
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| Q |
214 |
ttggagtttgatctggtgcggccaacgatttggcatgtcaccaataaaattttagggtatagggtgttttattatgtgacatttacggtagctaagt |
310 |
Q |
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|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47285760 |
ttggagtttgatctagtgcggccaacgatttggcatgtcaccaataaaattttagggtatagggtgttttattatgtgacatttacggtagctaagt |
47285664 |
T |
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